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{"sheet":"biomarker (1)","index":0,"n_rows":7198,"n_cols":30,"rows_kept":2250,"cut":true,"bounds":{"rows_first":1000,"rows_last":250,"rows_between":1000,"halvings":1},"flags":["formulas_cached_only"]}
["#ID","gene_name","T07_FPKM","T07_count","T08_FPKM","T08_count","T09_FPKM","T09_count","T10_FPKM","T10_count","T11_FPKM","T11_count","T12_FPKM","T12_count","FDR","log2FC","regulated","COG_class","COG_class_annotation","GO_annotation","KEGG_annotation","KEGG_pathway_annotation","KOG_class","KOG_class_annotation","Pfam_annotation","Swiss_Prot_annotation","eggNOG_class","eggNOG_class_annotation","NR_annotation","GO_second_level_annotation"]
["Bra037497","Bra037497",0.997316,61,2.603664,141,1.858628,101,0.164504,8,0.321236,15,0.628148,29,0.000642122618465873,-2.39413020169551,"down","--","--","Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: defense response (GO:0006952);; Biological Process: catabolic process (GO:0009056);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: metal ion transport (GO:0030001);; Biological Process: macromolecule metabolic process (GO:0043170);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","--","Heavy metal-associated isoprenylated plant protein 46 OS=Arabidopsis thaliana OX=3702 GN=HIPP46 PE=2 SV=1","S","Function unknown","PREDICTED: basic proline-rich protein [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra031153","Bra031153",38.171013,4924,92.220385,12008,93.561314,11048,36.978275,3374,18.340451,1601,16.018752,1399,{"v":5.10011558798704e-05,"d":"5.10E-05"},-2.13291939863922,"down","--","--","Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: defense response (GO:0006952);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Cellular Component: intracellular part (GO:0044424);; ","--","--","--","--","Arabidopsis phospholipase-like protein (PEARLI 4)","--","S","Function unknown","PREDICTED: mediator of DNA damage checkpoint protein 1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra029039","Bra029039",57.876247,5117,71.88437,6430,72.292646,5951,7.746184,488,1.964469,125,2.861146,182,{"v":2.4052886268358e-17,"d":"2.41E-17"},-4.32072770711941,"down","--","--","Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; ","--","--","[I]","Lipid transport and metabolism","START domain","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: uncharacterized protein LOC103857054 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra011576","Bra011576",46.78076,2634,82.60215,4687,83.383855,4325,15.003287,596,8.702958,335,11.747909,452,{"v":1.68220293648363e-15,"d":"1.68E-15"},-3.07799695171479,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103832978|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB32-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor MYB32-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra026245","Bra026245",26.005857,1267,82.040756,4032,69.276733,3121,1.56514,54,0,0,0.054739,2,0.00211616467813339,-3.77663973203853,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: protein storage vacuole (GO:0000326);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: methylammonium transmembrane transporter activity (GO:0015200);; Molecular Function: urea transmembrane transporter activity (GO:0015204);; Molecular Function: water channel activity (GO:0015250);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Cellular Component: central vacuole (GO:0042807);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: ammonium transmembrane transporter activity (GO:0051739);; Biological Process: urea transmembrane transport (GO:0071918);; Biological Process: methylammonium transmembrane transport (GO:0072489);; Biological Process: hydrogen peroxide transmembrane transport (GO:0080170);; ","K09873|1.25755e-144|brp:103868228|K09873 aquaporin TIP | (RefSeq) probable aquaporin TIP2-2","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Probable aquaporin TIP2-2 OS=Arabidopsis thaliana OX=3702 GN=TIP2-2 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: probable aquaporin TIP2-2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Brassica_rapa_newGene_17587","--",0.679995,43,0.798765,67,0.754339,62,1.546559,107,2.856781,182,3.729128,225,0.00473088653709742,1.44389102502207,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra007913","Bra007913",16.191034,808,26.332994,1325,24.29401,1121,14.960739,528,9.178029,312,7.212005,247,0.000161392156112352,-1.61348502899243,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","Protein of unknown function (DUF1645)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103852649 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra036195","Bra036195",3.613499,174,3.306941,164,4.043286,180,12.119354,413,20.232421,660,17.137205,561,{"v":3.1567746798187e-07,"d":"3.16E-07"},1.57629278223291,"up","--","--","Cellular Component: chloroplast envelope (GO:0009941);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837229 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra004550","Bra004550",56.905388,4842,41.850448,3558,43.576321,3504,16.381565,991,17.793635,1013,20.367727,1202,{"v":1.33099939131307e-29,"d":"1.33E-29"},-1.91995234391854,"down","--","--","Biological Process: response to superoxide (GO:0000303);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: positive regulation of seed maturation (GO:2000693);; ","K09060|0|brp:103866484|K09060 plant G-box-binding factor | (RefSeq) G-box-binding factor 3","--","--","--","G-box binding protein MFMR;; bZIP transcription factor;; Disordered region downstream of MFMR;; Basic region leucine zipper","G-box-binding factor 3 OS=Arabidopsis thaliana OX=3702 GN=GBF3 PE=1 SV=2","K","Transcription","PREDICTED: G-box-binding factor 3 isoform X1 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra017927","Bra017927",2.210307,61,8.821728,246,5.296154,135,0.699265,14,1.536016,29,2.048032,39,0.00167232102760901,-2.28545381418849,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: cytoplasm (GO:0005737);; ","K13448|5.38688e-98|brp:103872996|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML44","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain;; EF hand;; EF-hand domain pair;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region","Probable calcium-binding protein CML44 OS=Arabidopsis thaliana OX=3702 GN=CML44 PE=2 SV=2","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML44 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra025247","Bra025247",2.414526,33,4.426423,61,2.323949,30,20.923174,202,13.097085,122,9.065723,85,0.00703489874405397,1.56482648313086,"up","--","--","Cellular Component: cytoplasmic vesicle (GO:0016023);; ","--","--","--","--","Protein of unknown function (DUF3339)","--","S","Function unknown","uncharacterized protein LOC106349288 [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra003883","Bra003883",305.657593,14470,534.319458,25525,404.427155,17711,131.909897,4418,48.244114,1556,50.968147,1654,{"v":5.97705658630925e-09,"d":"5.98E-09"},-2.87088064589283,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: response to anoxia (GO:0034059);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: cellular response to freezing (GO:0071497);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF073-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra021531","Bra021531",12.604897,441,7.825152,269,7.092119,211,4.217776,147,6.075553,144,4.59588,156,0.00131388933472411,-1.04091368421553,"down","[K]","Transcription","Cellular Component: P-body (GO:0000932);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: small nucleolar ribonucleoprotein complex (GO:0005732);; Cellular Component: cytosol (GO:0005829);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: RNA metabolic process (GO:0016070);; Cellular Component: intracellular ribonucleoprotein complex (GO:0030529);; ","K12620|2.67042e-88|brp:103842307|K12620 U6 snRNA-associated Sm-like protein LSm1 | (RefSeq) sm-like protein LSM1B","RNA degradation (ko03018)","[A]","RNA processing and modification","LSM domain","Sm-like protein LSM1B OS=Arabidopsis thaliana OX=3702 GN=LSM1B PE=1 SV=1","K","Transcription","PREDICTED: sm-like protein LSM1B [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra020278","Bra020278",149.794724,5561,117.857124,4415,98.40184,3380,90.200333,2369,56.637131,1432,59.4198,1512,{"v":1.46450296560988e-06,"d":"1.46E-06"},-1.34699656663339,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleolus (GO:0005730);; Biological Process: nucleosome assembly (GO:0006334);; Biological Process: cell proliferation (GO:0008283);; Cellular Component: plasmodesma (GO:0009506);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11251|1.99496e-54|brp:103851537|K11251 histone H2A | (RefSeq) probable histone H2A.7","--","[B]","Chromatin structure and dynamics","C-terminus of histone H2A;; Core histone H2A/H2B/H3/H4","Probable histone H2A.7 OS=Arabidopsis thaliana OX=3702 GN=At5g59870 PE=1 SV=1","B","Chromatin structure and dynamics","PREDICTED: probable histone H2A.7 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054)"]
["Bra031293","Bra031293",14.473329,1955,25.196744,3422,23.56733,2989,13.383029,1274,6.276399,645,6.381016,600,{"v":6.9714166938849e-05,"d":"6.97E-05"},-1.75974018948942,"down","[T]","Signal transduction mechanisms","Biological Process: respiratory burst involved in defense response (GO:0002679);; Biological Process: cell surface pattern recognition receptor signaling pathway (GO:0002752);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: chitin binding (GO:0008061);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Molecular Function: transmembrane receptor protein kinase activity (GO:0019199);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: detection of molecule of fungal origin (GO:0032491);; Biological Process: detection of peptidoglycan (GO:0032499);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: cell wall modification (GO:0042545);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: protein self-association (GO:0043621);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: cell development (GO:0048468);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: pollen tube development (GO:0048868);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; Biological Process: cellular response to molecule of bacterial origin (GO:0071219);; Biological Process: cellular response to chitin (GO:0071323);; Molecular Function: chitosan binding (GO:2001080);; ","K13429|0|brp:103869159|K13429 chitin elicitor receptor kinase 1 | (RefSeq) chitin elicitor receptor kinase 1","Plant-pathogen interaction (ko04626)","--","--","Protein tyrosine kinase;; Protein kinase domain;; LysM domain","Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CERK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: chitin elicitor receptor kinase 1 isoform X2 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra001210","Bra001210",0.675472,134,0.323401,64,0.445088,81,1.995519,270,2.090932,277,2.341754,313,{"v":4.54173193009651e-06,"d":"4.54E-06"},1.56807690165214,"up","--","--","--","K10661|0|brp:103859173|K10661 E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin ligase SUD1","Protein processing in endoplasmic reticulum (ko04141)","[A]","RNA processing and modification","RING-variant domain","Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin ligase SUD1 [Brassica rapa]","--"]
["Bra011575","Bra011575",7.518529,283,42.102869,1564,28.590022,1108,0.402454,16,0.054085,3,0.264815,10,{"v":1.11770329959661e-16,"d":"1.12E-16"},-6.05534837198002,"down","--","--","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: actin binding (GO:0003779);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Biological Process: trichoblast differentiation (GO:0010054);; Cellular Component: actin cytoskeleton (GO:0015629);; Biological Process: cell growth (GO:0016049);; Biological Process: actin filament polymerization (GO:0030041);; Biological Process: actin filament depolymerization (GO:0030042);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; ","K05765|1.71054e-102|brp:103833075|K05765 cofilin | (RefSeq) actin-depolymerizing factor 9","--","[Z]","Cytoskeleton","Cofilin/tropomyosin-type actin-binding protein","Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2","S","Function unknown","PREDICTED: actin-depolymerizing factor 9 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007)"]
["Bra034450","Bra034450",1.457495,128,0.923436,81,1.170945,80,6.601658,393,5.446319,314,5.372925,287,{"v":2.9673981403349e-09,"d":"2.97E-09"},1.72344910494378,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; ","--","--","--","--","--","Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP2 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103868856 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Brassica_rapa_newGene_13800","--",0.115941,21,0.044644,9,0.012175,3,0.896583,115,1.159179,143,1.358084,168,{"v":6.57460453272405e-08,"d":"6.57E-08"},3.43241017401729,"up","--","--","--","--","--","--","--","--","--","--","--","hypothetical protein 23.t00068 [Brassica oleracea]","--"]
["Bra026860","Bra026860",9.178288,558,23.020121,1411,22.622492,1271,4.476692,193,10.450229,433,9.870329,411,0.00287163813006001,-1.64829761055249,"down","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Molecular Function: galactoside 2-alpha-L-fucosyltransferase activity (GO:0008107);; Molecular Function: fucosyltransferase activity (GO:0008417);; Biological Process: ethylene biosynthetic process (GO:0009693);; Cellular Component: membrane (GO:0016020);; Biological Process: fucosylation (GO:0036065);; Biological Process: cell wall biogenesis (GO:0042546);; ","K13681|0|brp:103843001|K13681 xyloglucan fucosyltransferase [EC:2.4.1.-] | (RefSeq) fucosyltransferase 6-like","--","--","--","Xyloglucan fucosyltransferase","Fucosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=FUT6 PE=2 SV=1","--","--","fucosyltransferase 6-like [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra031794","Bra031794",5.553697,314,10.003407,570,9.413261,492,0.193534,8,0.052722,3,0,0,{"v":4.54867210205594e-21,"d":"4.55E-21"},-6.38385911478303,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: response to chitin (GO:0010200);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: innate immune response (GO:0045087);; Cellular Component: apoplast (GO:0048046);; Biological Process: response to other organism (GO:0051707);; Biological Process: response to karrikin (GO:0080167);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","Legume lectin domain","Lectin-like protein At1g53080 OS=Arabidopsis thaliana OX=3702 GN=At1g53080 PE=2 SV=1","--","--","PREDICTED: lectin-like protein At1g53080 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; cellular component: extracellular region (GO:0005576)"]
["Bra017343","Bra017343",11.903935,282,16.516655,395,11.844417,260,3.189594,54,1.366961,23,2.242654,37,{"v":1.07184649540407e-11,"d":"1.07E-11"},-2.99370229652239,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","Protein NIM1-INTERACTING 2 OS=Arabidopsis thaliana OX=3702 GN=NIMIN-2 PE=1 SV=1","--","--","PREDICTED: protein NIM1-INTERACTING 2-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra026865","Bra026865",1.212837,119,1.452948,146,0.816277,75,3.167397,226,3.378393,229,4.366265,303,0.0041574628379047,1.09062039751481,"up","--","--","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Molecular Function: protein-lysine N-methyltransferase activity (GO:0016279);; Biological Process: peptidyl-lysine trimethylation (GO:0018023);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity (GO:0030785);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: histone lysine methylation (GO:0034968);; ","K00592|0|brp:103843008|K00592 [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127] | (RefSeq) fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic","--","[R]","General function prediction only","Rubisco LSMT substrate-binding;; SET domain","[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LSMT-L PE=1 SV=1","S","Function unknown","PREDICTED: fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824)"]
["Bra019665","Bra019665",40.504108,2059,36.655472,1881,41.319477,1943,30.992435,1115,23.280745,806,28.105255,979,{"v":1.29655367342847e-07,"d":"1.30E-07"},-1.06927783387595,"down","[I]","Lipid transport and metabolism","--","K04713|0|brp:103872122|K04713 sphinganine C4-monooxygenase [EC:1.14.18.5] | (RefSeq) sphinganine C4-monooxygenase 2","Sphingolipid metabolism (ko00600)","[I]","Lipid transport and metabolism","Fatty acid hydroxylase superfamily","Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=SBH2 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: sphinganine C4-monooxygenase 2 [Brassica rapa]","--"]
["Bra030742","Bra030742",4.686108,1113,7.579521,1773,8.313255,1832,3.847342,665,4.077104,651,3.154661,513,{"v":6.99468687943612e-05,"d":"6.99E-05"},-1.42191678062073,"down","--","--","--","--","--","--","--","Zein-binding","Myosin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MYOB1 PE=1 SV=1","S","Function unknown","PREDICTED: myosin-binding protein 1-like [Brassica rapa]","--"]
["Bra001948","Bra001948",1.420509,39,1.224812,34,0.990593,26,6.860336,133,6.583705,123,6.68835,126,{"v":2.81782458156271e-08,"d":"2.82E-08"},1.87043381599646,"up","--","--","Biological Process: response to reactive oxygen species (GO:0000302);; Cellular Component: chromatin (GO:0000785);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: copper ion transport (GO:0006825);; Biological Process: high-affinity iron ion transmembrane transport (GO:0006827);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Biological Process: aging (GO:0007568);; Biological Process: response to salt stress (GO:0009651);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: specification of floral organ identity (GO:0010093);; Molecular Function: phosphatidylinositol-5-phosphate binding (GO:0010314);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: gene silencing by RNA (GO:0031047);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: histone H3-K4 methylation (GO:0051568);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","--","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103860035 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576)"]
["Bra007991","Bra007991",9.693725,979,24.563131,2498,23.879661,2228,3.137723,226,0.71145,51,1.068889,75,{"v":1.76837324406626e-09,"d":"1.77E-09"},-3.82048186573375,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: maltose:proton symporter activity (GO:0005364);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: sucrose metabolic process (GO:0005985);; Biological Process: oligopeptide transport (GO:0006857);; Molecular Function: sucrose:proton symporter activity (GO:0008506);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to nematode (GO:0009624);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: pollen germination (GO:0009846);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: phloem sucrose loading (GO:0009915);; Biological Process: response to chitin (GO:0010200);; Molecular Function: biotin transporter activity (GO:0015225);; Biological Process: maltose transport (GO:0015768);; Biological Process: sucrose transport (GO:0015770);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: salicin transport (GO:0042948);; Biological Process: arbutin transport (GO:0042949);; Molecular Function: salicin transmembrane transporter activity (GO:0042950);; Molecular Function: arbutin transmembrane transporter activity (GO:0042951);; Biological Process: seed development (GO:0048316);; Biological Process: transmembrane transport (GO:0055085);; Cellular Component: pollen tube (GO:0090406);; ","K15378|0|brp:103852734|K15378 solute carrier family 45, member 1/2/4 | (RefSeq) sucrose transport protein SUC1","--","[G]","Carbohydrate transport and metabolism","MFS/sugar transport protein","Sucrose transport protein SUC1 OS=Arabidopsis thaliana OX=3702 GN=SUC1 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: sucrose transport protein SUC1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra003541","Bra003541",7.122016,678,4.471179,414,4.826722,413,25.418186,1333,28.699207,1877,29.321273,1422,{"v":4.08689785075951e-09,"d":"4.09E-09"},1.57700419495584,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103830409 isoform X2 [Brassica rapa] ","--"]
["Bra037901","Bra037901",4.070699,365,5.738899,521,4.694126,396,2.055506,133,3.35983,204,1.657404,104,0.00012644235029876,-1.55852702018916,"down","[C]","Energy production and conversion","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: mitochondrial intermembrane space (GO:0005758);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: cell proliferation (GO:0008283);; Molecular Function: electron carrier activity (GO:0009055);; Molecular Function: heme binding (GO:0020037);; Biological Process: electron transport chain (GO:0022900);; Cellular Component: respiratory chain (GO:0070469);; ","K08738|1.23241e-65|eus:EUTSA_v10029081mg|K08738 cytochrome c | (RefSeq) hypothetical protein","Sulfur metabolism (ko00920)","[C]","Energy production and conversion","Cytochrome c;; Cytochrome C oxidase, cbb3-type, subunit III","Cytochrome c-2 OS=Arabidopsis thaliana OX=3702 GN=CYTC-2 PE=1 SV=1","C","Energy production and conversion","cytochrome c-2 [Eutrema salsugineum] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: electron carrier activity (GO:0009055);; biological process: cellular process (GO:0009987);; cellular component: membrane part (GO:0044425)"]
["Bra004062","Bra004062",141.949966,1846,266.897339,3501,264.528656,3181,79.490517,731,68.671654,608,71.032906,633,{"v":4.57540893144158e-09,"d":"4.58E-09"},-2.14943139054347,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103830999 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra013983","Bra013983",18.610162,1340,8.858443,998,6.7391,696,17.989342,1420,80.105455,3871,67.184035,3257,0.00148781681569895,1.42925003009335,"up","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: pyruvate decarboxylase activity (GO:0004737);; Cellular Component: cytosol (GO:0005829);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Molecular Function: oxalyl-CoA decarboxylase activity (GO:0008949);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: thiamine pyrophosphate binding (GO:0030976);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; ","K12261|0|brp:103833165|K12261 2-hydroxyacyl-CoA lyase 1 [EC:4.1.-.-] | (RefSeq) 2-hydroxyacyl-CoA lyase","Peroxisome (ko04146)","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;; Thiamine pyrophosphate enzyme, central domain;; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;; CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit","2-hydroxyacyl-CoA lyase OS=Arabidopsis thaliana OX=3702 GN=HACL PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: 2-hydroxyacyl-CoA lyase [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896)"]
["Bra013275","Bra013275",85.609317,10759,141.756934,17954,140.373626,16234,42.855758,3797,24.703738,2113,23.677542,2041,{"v":1.17433819164558e-10,"d":"1.17E-10"},-2.51603139428885,"down","--","--","Molecular Function: inositol-polyphosphate 5-phosphatase activity (GO:0004445);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: seed germination (GO:0009845);; Biological Process: dephosphorylation (GO:0016311);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: inositol trisphosphate metabolic process (GO:0032957);; Molecular Function: phosphatidylinositol bisphosphate phosphatase activity (GO:0034593);; Molecular Function: phosphatidylinositol phosphate 5-phosphatase activity (GO:0034595);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: intracellular part (GO:0044424);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: inositol phosphate dephosphorylation (GO:0046855);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: biological regulation (GO:0065007);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Spore morphogenesis and germination protein YwcE","Type I inositol polyphosphate 5-phosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=IP5P2 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: type I inositol polyphosphate 5-phosphatase 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179)"]
["Bra000725","Bra000725",0.913772,63,0.027444,3,0.12999,9,0.530341,28,15.084811,700,18.972312,890,0.000776752503473245,3.48603785083565,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: transport (GO:0006810);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: pollen exine formation (GO:0010584);; Molecular Function: sugar transmembrane transporter activity (GO:0051119);; ","K15382|3.65526e-94|bna:106443839|K15382 solute carrier family 50 (sugar transporter) | (RefSeq) bidirectional sugar transporter SWEET7-like","--","[R]","General function prediction only","Sugar efflux transporter for intercellular exchange","Bidirectional sugar transporter SWEET7 OS=Arabidopsis thaliana OX=3702 GN=SWEET7 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: bidirectional sugar transporter SWEET7-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; molecular function: transporter activity (GO:0005215)"]
["Bra007988","Bra007988",0,0,0.044585,7,0,0,1.136173,109,0.75035,65,1.204657,113,{"v":8.69913419895398e-05,"d":"8.70E-05"},4.02258106426136,"up","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: binding (GO:0005488);; Molecular Function: iron ion binding (GO:0005506);; Biological Process: terpenoid metabolic process (GO:0006721);; Molecular Function: steroid hydroxylase activity (GO:0008395);; Biological Process: lipid biosynthetic process (GO:0008610);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Cellular Component: membrane (GO:0016020);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: trans-zeatin biosynthetic process (GO:0033466);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: oxidation-reduction process (GO:0055114);; ","K20660|0|brp:103852728|K20660 cytochrome P450 family 709 | (RefSeq) cytochrome P450 709B1-like","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Cytochrome P450 709B1 OS=Arabidopsis thaliana OX=3702 GN=CYP709B1 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 709B1-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020)"]
["Bra018620","Bra018620",22.213506,1923,33.385479,2942,29.650009,2394,15.066916,961,15.048138,906,15.38656,946,{"v":5.47092611135959e-07,"d":"5.47E-07"},-1.42011450333861,"down","[I]","Lipid transport and metabolism","Molecular Function: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process (GO:0000036);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: acyl-[acyl-carrier-protein] hydrolase activity (GO:0016297);; ","K10781|0|brp:103871592|K10781 fatty acyl-ACP thioesterase B [EC:3.1.2.14 3.1.2.21] | (RefSeq) palmitoyl-acyl carrier protein thioesterase, chloroplastic","Fatty acid biosynthesis (ko00061);; Fatty acid metabolism (ko01212)","--","--","Acyl-ACP thioesterase;; Acyl-ATP thioesterase","Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FATB PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824)"]
["Bra031931","Bra031931",36.108749,2592,55.41663,4015,48.953526,3251,37.846718,1922,27.337086,1337,26.714293,1315,0.000391502929237432,-1.16256577962134,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103855230 [Brassica rapa]","--"]
["Bra038904","Bra038904",0.376258,26,0.483927,25,0.478721,21,2.39612,65,8.964927,336,8.005088,257,{"v":1.41979125053529e-05,"d":"1.42E-05"},2.89986698439622,"up","--","--","Biological Process: maltose metabolic process (GO:0000023);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: positive regulation of catalytic activity (GO:0043085);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103872349 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra038663","Bra038663",138.715983,9256,205.343458,13172,185.234608,11568,122.490424,6028,108.567753,4918,105.008053,4904,{"v":2.18844972730415e-05,"d":"2.19E-05"},-1.15977691838295,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: flower development (GO:0009908);; Biological Process: leaf senescence (GO:0010150);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 102 OS=Arabidopsis thaliana OX=3702 GN=NAC102 PE=1 SV=1","--","--","PREDICTED: NAC domain-containing protein 102 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414)"]
["Bra019954","Bra019954",5.519797,228,18.995142,789,18.572346,707,2.057857,60,0.41226,12,0.4615,14,{"v":9.05021285238171e-08,"d":"9.05E-08"},-3.97716060850595,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","uncharacterized protein LOC106351166 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra004744","Bra004744",20.214338,1016,6.554584,333,5.470959,255,0.3934,14,0,0,0,0,0.0082978761166843,-3.31653894164226,"down","[E]","Amino acid transport and metabolism","Molecular Function: 3-isopropylmalate dehydratase activity (GO:0003861);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: glycolytic process (GO:0006096);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: leucine biosynthetic process (GO:0009098);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: 3-isopropylmalate dehydratase complex (GO:0009316);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: response to cadmium ion (GO:0046686);; ","K01704|1.17794e-151|brp:103866695|K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] | (RefSeq) 3-isopropylmalate dehydratase small subunit 1","Valine, leucine and isoleucine biosynthesis (ko00290);; C5-Branched dibasic acid metabolism (ko00660);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Aconitase C-terminal domain","3-isopropylmalate dehydratase small subunit 1 OS=Arabidopsis thaliana OX=3702 GN=IPMI2 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: 3-isopropylmalate dehydratase small subunit 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007)"]
["Bra037817","Bra037817",1.662089,98,0.758737,51,0.763976,51,4.036864,181,3.042215,147,4.459942,201,0.000477734613991499,1.34900315647165,"up","--","--","Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: xylem development (GO:0010089);; Biological Process: stomatal lineage progression (GO:0010440);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: regulation of cell proliferation (GO:0042127);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: negative regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0045736);; Biological Process: seed development (GO:0048316);; ","K18810|1.48321e-180|brp:103837579|K18810 cyclin D1/2/4, plant | (RefSeq) cyclin-D4-1-like","--","[D]","Cell cycle control, cell division, chromosome partitioning","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: cyclin-D4-1-like isoform X2 [Brassica rapa]","biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; molecular function: enzyme regulator activity (GO:0030234);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra027347","Bra027347",62.981431,13529,39.82482,8570,52.841821,10493,25.857191,3889,21.969669,3075,22.273675,2920,{"v":1.77702727739793e-15,"d":"1.78E-15"},-1.7484045445352,"down","[T]","Signal transduction mechanisms","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: circadian rhythm (GO:0007623);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nematode (GO:0009624);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: response to organic substance (GO:0010033);; Biological Process: positive regulation of atrichoblast fate specification (GO:0010059);; Biological Process: positive regulation of trichoblast fate specification (GO:0010063);; Biological Process: root meristem specification (GO:0010071);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: regulation of cell proliferation (GO:0042127);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: leaf development (GO:0048366);; Biological Process: plant ovule development (GO:0048481);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anther development (GO:0048653);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Leucine rich repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeats (2 copies);; Leucine Rich repeat;; Leucine Rich Repeat","Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1","S","Function unknown","PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 7 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: rhythmic process (GO:0048511);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane part (GO:0044425)"]
["Bra016237","Bra016237",137.88443,10273,161.397156,12134,113.014015,7789,60.437866,3186,26.809612,1361,23.908121,1221,{"v":3.76614354211184e-08,"d":"3.77E-08"},-2.36498756705974,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: glucuronoxylan biosynthetic process (GO:0010417);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: multicellular organism reproduction (GO:0032504);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: polygalacturonate 4-alpha-galacturonosyltransferase activity (GO:0047262);; Biological Process: leaf development (GO:0048366);; Biological Process: developmental growth (GO:0048589);; Biological Process: cell wall pectin biosynthetic process (GO:0052325);; Biological Process: cell wall thickening (GO:0052386);; Cellular Component: pollen tube (GO:0090406);; ","--","--","--","--","Glycosyl transferase family 8","Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana OX=3702 GN=GATL9 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: probable galacturonosyltransferase-like 9 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007)"]
["Bra013508","Bra013508",2.764899,281,5.26317,528,4.202691,396,3.278235,235,2.663533,188,2.494131,176,0.00963509634099666,-1.05928778310849,"down","--","--","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: phospholipid binding (GO:0005543);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: GTPase activator activity (GO:0008060);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: pollen development (GO:0009555);; Biological Process: cell growth (GO:0016049);; Biological Process: endosomal transport (GO:0016197);; Biological Process: regulation of GTPase activity (GO:0032312);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K12486|1.279e-168|brp:103858804|K12486 stromal membrane-associated protein | (RefSeq) ADP-ribosylation factor GTPase-activating protein AGD12-like","Endocytosis (ko04144)","[R]","General function prediction only","C2 domain;; Putative GTPase activating protein for Arf","ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana OX=3702 GN=AGD12 PE=1 SV=1","S","Function unknown","PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: metabolic process (GO:0008152)"]
["Bra038704","Bra038704",4.351715,493,8.658859,802,7.027463,636,2.409204,225,1.109916,98,0.828035,78,{"v":1.13956129099772e-05,"d":"1.14E-05"},-2.24329403617083,"down","[E]","Amino acid transport and metabolism","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; Cellular Component: extracellular region (GO:0005576);; Biological Process: proteolysis (GO:0006508);; Cellular Component: plant-type cell wall (GO:0009505);; Molecular Function: sinapoyltransferase activity (GO:0016752);; Biological Process: secondary metabolic process (GO:0019748);; ","K16296|0|brp:103845689|K16296 serine carboxypeptidase-like clade I [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 15","--","[OE]","Posttranslational modification, protein turnover, chaperones;; Amino acid transport and metabolism","Serine carboxypeptidase","Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana OX=3702 GN=SCPL17 PE=2 SV=1","E","Amino acid transport and metabolism","BnaA01g30780D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra008846","Bra008846",68.257492,6348,82.526431,8427,90.193853,8521,43.624216,3050,51.207997,3534,54.190585,3731,{"v":1.01754256386169e-05,"d":"1.02E-05"},-1.23241893214697,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; ","K13464|8.80579e-139|brp:103846592|K13464 jasmonate ZIM domain-containing protein | (RefSeq) protein TIFY 9","Plant hormone signal transduction (ko04075)","--","--","Divergent CCT motif;; tify domain","Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1","S","Function unknown","PREDICTED: protein TIFY 9 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra029791","Bra029791",4.303594,398,6.728694,649,6.145078,546,3.891829,264,3.943917,219,2.977523,185,0.000380186176306094,-1.30251654503547,"down","[CE]","Energy production and conversion;; Amino acid transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: 3-isopropylmalate dehydrogenase activity (GO:0003862);; Molecular Function: isocitrate dehydrogenase (NAD+) activity (GO:0004449);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Biological Process: isocitrate metabolic process (GO:0006102);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: leucine biosynthetic process (GO:0009098);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: NAD binding (GO:0051287);; Biological Process: response to misfolded protein (GO:0051788);; ","K00030|0|brp:103870516|K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] | (RefSeq) isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial","Citrate cycle (TCA cycle) (ko00020);; Carbon metabolism (ko01200);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Isocitrate/isopropylmalate dehydrogenase","Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IDH6 PE=1 SV=2","E","Amino acid transport and metabolism","isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial [Brassica napus]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: extracellular region (GO:0005576);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra005572","Bra005572",78.419312,6416,158.07297,13543,150.711612,12280,19.48398,1240,7.262206,429,7.67044,463,{"v":5.72588867143713e-13,"d":"5.73E-13"},-3.81393018090107,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to chitin (GO:0010200);; ","--","--","--","--","Cysteine-rich TM module stress tolerance","--","S","Function unknown","PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra035833","Bra035833",27.354884,2746,39.424772,4016,41.67287,3887,10.240321,739,5.477913,370,6.675489,464,{"v":1.3237245300597e-13,"d":"1.32E-13"},-2.77118692046247,"down","--","--","Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","[S]","Function unknown","Eukaryotic protein of unknown function (DUF829)","--","S","Function unknown","PREDICTED: transmembrane protein 53 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra035182","Bra035182",16.677507,544,20.346317,670,22.858755,690,5.899023,137,3.352747,75,1.733797,39,{"v":1.24394508566901e-08,"d":"1.24E-08"},-2.86660567450717,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: amino acid import (GO:0043090);; ","--","--","--","--","VQ motif","VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1","S","Function unknown","PREDICTED: VQ motif-containing protein 11-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra020130","Bra020130",5.270037,999,12.368141,2387,13.200801,2392,4.177433,533,4.358503,532,4.984762,658,0.00012471036129694,-1.77880127210371,"down","--","--","Molecular Function: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (GO:0004439);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: response to stress (GO:0006950);; Biological Process: cell adhesion (GO:0007155);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: inositol trisphosphate metabolic process (GO:0032957);; Biological Process: phosphatidylinositol-3-phosphate biosynthetic process (GO:0036092);; Molecular Function: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity (GO:0043813);; Biological Process: actin nucleation (GO:0045010);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: inositol phosphate dephosphorylation (GO:0046855);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[I]","Lipid transport and metabolism","SacI homology domain","Phosphoinositide phosphatase SAC4 OS=Arabidopsis thaliana OX=3702 GN=SAC4 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: phosphoinositide phosphatase SAC4-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological adhesion (GO:0022610);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra030133","Bra030133",19.845699,412,38.540974,808,35.214481,677,24.363003,358,19.879795,282,19.721991,281,0.00794152265388509,-1.09831740605455,"down","--","--","--","--","--","--","--","--","Precursor of CEP14 OS=Arabidopsis thaliana OX=3702 GN=CEP14 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103828969 [Brassica rapa] ","--"]
["Bra035198","Bra035198",188.024554,10485,254.098023,14348,270.851433,14154,75.103194,3008,58.400804,2297,56.433276,2271,{"v":1.46060375617469e-17,"d":"1.46E-17"},-2.40657500007728,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: defense response (GO:0006952);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: macromolecule localization (GO:0033036);; ","--","--","--","--","Phloem protein 2;; F-box domain;; F-box-like","F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: F-box protein PP2-B11 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179)"]
["Bra004580","Bra004580",1.060145,73,3.169093,223,2.817292,180,0.688621,15,0.140006,8,0.215376,13,{"v":4.99973755288352e-08,"d":"5.00E-08"},-3.52938520651981,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: RNA-directed 5'-3' RNA polymerase activity (GO:0003968);; Cellular Component: cytosol (GO:0005829);; ","--","--","[BK]","Chromatin structure and dynamics;; Transcription","Macro domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103866509 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra011201","Bra011201",397.169483,25150,848.344079,54917,788.207253,48571,174.35442,7954,110.977452,4724,121.056114,5205,{"v":1.77668663983043e-11,"d":"1.78E-11"},-2.84899220535926,"down","[F]","Nucleotide transport and metabolism","Cellular Component: cytosol (GO:0005829);; Biological Process: glutamine metabolic process (GO:0006541);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; Biological Process: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine (GO:0019281);; Biological Process: glucosinolate metabolic process (GO:0019760);; Molecular Function: gamma-glutamyl-peptidase activity (GO:0034722);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[F]","Nucleotide transport and metabolism","Glutamine amidotransferase class-I;; Peptidase C26;; Homoserine O-succinyltransferase","Gamma-glutamyl peptidase 1 OS=Arabidopsis thaliana OX=3702 GN=GGP1 PE=1 SV=1","F","Nucleotide transport and metabolism","PREDICTED: gamma-glutamyl peptidase 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra008951","Bra008951",1.690855,185,1.126889,120,1.176547,119,3.765185,281,4.925156,339,8.076644,591,0.000530101931437135,1.44378767065301,"up","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: metabolic process (GO:0008152);; Cellular Component: membrane (GO:0016020);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Biological Process: cell wall biogenesis (GO:0042546);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: xylan metabolic process (GO:0045491);; ","--","--","[GMW]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis;; Extracellular structures","Exostosin family","Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03795 PE=3 SV=2","S","Function unknown","PREDICTED: probable glycosyltransferase At3g07620 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra029889","Bra029889",6.797404,416,15.601768,963,13.784022,780,2.518511,109,0.122737,6,0.250253,11,{"v":7.29518487915064e-05,"d":"7.30E-05"},-3.5482823383311,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein import into nucleus (GO:0006606);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to UV-B (GO:0010224);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: heat acclimation (GO:0010286);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular response to heat (GO:0034605);; Biological Process: response to hydrogen peroxide (GO:0042542);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: leaf development (GO:0048366);; Biological Process: carpel development (GO:0048440);; Biological Process: meristem development (GO:0048507);; Biological Process: cellular response to freezing (GO:0071497);; ","K09286|0|brp:103870411|K09286 EREBP-like factor | (RefSeq) dehydration-responsive element-binding protein 2B","--","--","--","AP2 domain","Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana OX=3702 GN=DREB2B PE=2 SV=1","K","Transcription","PREDICTED: dehydration-responsive element-binding protein 2B [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra012389","Bra012389",3.974544,365,4.123384,502,4.473998,397,1.17432,94,0.465714,35,0.395736,24,{"v":2.07050960828116e-07,"d":"2.07E-07"},-2.94163200722296,"down","[E]","Amino acid transport and metabolism","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Molecular Function: spermidine synthase activity (GO:0004766);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: spermidine biosynthetic process (GO:0008295);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: serine family amino acid metabolic process (GO:0009069);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: vegetative phase change (GO:0010050);; Molecular Function: thermospermine synthase activity (GO:0010487);; Molecular Function: spermine synthase activity (GO:0016768);; Biological Process: cell wall modification (GO:0042545);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: xylem vessel member cell differentiation (GO:0048759);; Biological Process: root hair cell differentiation (GO:0048765);; ","K00797|0|brp:103829257|K00797 spermidine synthase [EC:2.5.1.16] | (RefSeq) spermidine synthase 1-like","Cysteine and methionine metabolism (ko00270);; Arginine and proline metabolism (ko00330);; beta-Alanine metabolism (ko00410);; Glutathione metabolism (ko00480)","[E]","Amino acid transport and metabolism","Spermine/spermidine synthase domain;; Spermidine synthase tetramerisation domain","Spermidine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=SPDSYN1 PE=1 SV=1","E","Amino acid transport and metabolism","BnaA07g09790D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501)"]
["Bra006908","Bra006908",10.085979,867,1.705,137,1.481959,112,13.568722,813,35.636333,2092,40.425071,2389,0.0063325209307896,2.08596888251721,"up","--","--","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: protein binding (GO:0005515);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: protein tyrosine/serine/threonine phosphatase activity (GO:0008138);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: carbohydrate phosphatase activity (GO:0019203);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: polysaccharide binding (GO:0030247);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Molecular Function: sugar-phosphatase activity (GO:0050308);; Molecular Function: starch binding (GO:2001070);; ","--","--","[V]","Defense mechanisms","Glycogen recognition site of AMP-activated protein kinase;; Dual specificity phosphatase, catalytic domain","Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: phosphoglucan phosphatase DSP4, chloroplastic isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: rhythmic process (GO:0048511);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra010861","Bra010861",7.648559,170,4.819025,108,4.176597,86,15.689745,246,21.294664,321,18.334118,278,0.000350342567255698,1.17442852391685,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","uncharacterized protein LOC106361674 [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000175","Bra000175",0.714585,122,1.542027,259,5.363659,514,0.782442,100,0.36407,41,0.451073,56,0.00221242693559408,-2.12441049323265,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Glycosyl transferases group 1;; F-box domain;; F-box-like","Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana OX=3702 GN=At3g18150 PE=4 SV=2","M","Cell wall/membrane/envelope biogenesis","putative F-box/LRR-repeat protein At3g18150 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra032034","Bra032034",75.272062,3832,30.442921,1587,30.993539,1517,31.479541,1200,19.942828,755,23.277105,843,0.00170118700606754,-1.27560762092839,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: amino acid transport (GO:0006865);; Biological Process: autophagy (GO:0006914);; ","--","--","[S]","Function unknown","PPPDE putative peptidase domain","DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1","S","Function unknown","PREDICTED: deSI-like protein At4g17486 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra014741","Bra014741",42.592888,6248,53.755772,8178,55.615626,7815,35.15812,3583,35.581284,3509,33.815696,3359,{"v":3.13633239789995e-06,"d":"3.14E-06"},-1.14931133561748,"down","[J]","Translation, ribosomal structure and biogenesis","Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein binding (GO:0005515);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: nuclear body (GO:0016604);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K12900|1.30867e-67|brp:103863157|K12900 FUS-interacting serine-arginine-rich protein 1 | (RefSeq) serine/arginine-rich SC35-like splicing factor SCL30","Spliceosome (ko03040)","[R]","General function prediction only","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1","S","Function unknown","PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra037151","Bra037151",31.602264,3036,41.719911,4053,43.112081,3860,29.195995,1988,23.943399,1574,21.96114,1456,{"v":2.78067921099157e-05,"d":"2.78E-05"},-1.18409292982363,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ion transport (GO:0006811);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of gibberellic acid mediated signaling pathway (GO:0009937);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: seed maturation (GO:0010431);; Biological Process: cell differentiation (GO:0030154);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: root development (GO:0048364);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: regulation of cell division (GO:0051302);; ","--","--","[R]","General function prediction only","Zinc finger, C2H2 type","Protein indeterminate-domain 1 OS=Arabidopsis thaliana OX=3702 GN=IDD1 PE=1 SV=1","S","Function unknown","PREDICTED: protein indeterminate-domain 1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414)"]
["Bra036140","Bra036140",148.038071,4624,237.903046,7499,146.955063,4247,102.32579,2262,84.170921,1791,86.325752,1848,{"v":1.89771269841184e-06,"d":"1.90E-06"},-1.5075132701185,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: cytosol (GO:0005829);; Biological Process: proteolysis (GO:0006508);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: response to red light (GO:0010114);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: response to stimulus (GO:0050896);; ","K02183|2.71087e-109|brp:103837288|K02183 calmodulin | (RefSeq) calmodulin","Phosphatidylinositol signaling system (ko04070);; Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF hand;; EF-hand domain;; EF-hand domain pair;; EF-hand domain pair","Calcium-binding protein CP1 OS=Arabidopsis thaliana OX=3702 GN=CP1 PE=2 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calmodulin [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226)"]
["Brassica_rapa_newGene_1078","--",0.330486,29,0.260916,24,0.216964,19,0.725109,43,3.946748,229,2.205199,115,0.00216446020175835,2.18708260158458,"up","--","--","Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; ","K14803|2.79113e-37|aly:ARALYDRAFT_479200|K14803 protein phosphatase PTC2/3 [EC:3.1.3.16] | (RefSeq) hypothetical protein","--","[T]","Signal transduction mechanisms","--","Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana OX=3702 GN=At3g17250 PE=2 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 43 isoform X2 [Eutrema salsugineum]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)"]
["Bra038763","Bra038763",9.359683,1032,11.977332,1296,13.328086,1358,31.581851,2393,68.414294,5164,67.110495,4891,{"v":4.66785857341218e-05,"d":"4.67E-05"},1.64160486534663,"up","[E]","Amino acid transport and metabolism","Molecular Function: protein binding (GO:0005515);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: iron ion transport (GO:0006826);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: lipid transport (GO:0006869);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to nematode (GO:0009624);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: lithium ion transport (GO:0010351);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Molecular Function: high-affinity oligopeptide transporter activity (GO:0015334);; Biological Process: nitrate transport (GO:0015706);; Biological Process: proline transport (GO:0015824);; Biological Process: chlorophyll catabolic process (GO:0015996);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: dipeptide transporter activity (GO:0042936);; Molecular Function: tripeptide transporter activity (GO:0042937);; Biological Process: dipeptide transport (GO:0042938);; Biological Process: tripeptide transport (GO:0042939);; Biological Process: response to leucine (GO:0043201);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to histidine (GO:0080052);; Biological Process: response to phenylalanine (GO:0080053);; Molecular Function: low-affinity nitrate transmembrane transporter activity (GO:0080054);; Biological Process: low-affinity nitrate transport (GO:0080055);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[E]","Amino acid transport and metabolism","POT family;; Major Facilitator Superfamily","Protein NRT1/ PTR FAMILY 7.2 OS=Arabidopsis thaliana OX=3702 GN=NPF7.2 PE=2 SV=2","E","Amino acid transport and metabolism","PREDICTED: protein NRT1/ PTR FAMILY 7.2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; molecular function: transporter activity (GO:0005215)"]
["Bra032805","Bra032805",1.068678,91,3.236917,276,4.246247,332,0,0,0.161886,10,0,0,{"v":1.25485898610401e-05,"d":"1.25E-05"},-4.58663561167798,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: multicellular organism development (GO:0007275);; Molecular Function: O-acyltransferase activity (GO:0008374);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: cellular developmental process (GO:0048869);; Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734);; ","--","--","--","--","Transferase family","BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana OX=3702 GN=BAHD1 PE=2 SV=1","S","Function unknown","PREDICTED: BAHD acyltransferase At5g47980 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra040771","Bra040771",14.913858,822,20.443646,1133,19.688796,1001,14.82649,577,12.123289,456,12.168447,460,0.000331462764835258,-1.04272436227982,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: heme oxygenase (decyclizing) activity (GO:0004392);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: heme oxidation (GO:0006788);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: photoperiodism (GO:0009648);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);; Biological Process: phytochromobilin biosynthetic process (GO:0010024);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: inflorescence development (GO:0010229);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: heme binding (GO:0020037);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: cellular response to UV-C (GO:0071494);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K00510|0|brp:103847911|K00510 heme oxygenase (biliverdin-producing) [EC:1.14.14.18] | (RefSeq) HO1; heme oxygenase 1, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","[P]","Inorganic ion transport and metabolism","Heme oxygenase","Heme oxygenase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HO1 PE=1 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: heme oxygenase 1, chloroplastic [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra020732","Bra020732",26.270985,587,16.66394,376,19.465586,402,4.401103,70,0.676833,11,3.208161,50,{"v":2.12020984624394e-07,"d":"2.12E-07"},-3.18779716128618,"down","--","--","Cellular Component: membrane (GO:0016020);; Biological Process: secretion by cell (GO:0032940);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: multi-organism process (GO:0051704);; Biological Process: regulation of amino acid export (GO:0080143);; ","--","--","--","--","--","Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana OX=3702 GN=GDU6 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: protein GLUTAMINE DUMPER 6-like [Brassica rapa]","cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007)"]
["Bra033803","Bra033803",3.247909,208,7.341978,475,4.850187,288,0.159921,8,0,0,0,0,{"v":3.04674448490327e-10,"d":"3.05E-10"},-5.70669270080954,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: membrane fusion (GO:0006944);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to salt stress (GO:0071472);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Receptor like protein kinase S.3 OS=Arabidopsis thaliana OX=3702 GN=LECRKS3 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: receptor like protein kinase S.3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra012719","Bra012719",6.593409,267,3.224558,132,3.939632,148,13.007907,372,20.916342,575,17.281223,478,0.000249001139271772,1.33482664668179,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: chlorophyll catabolic process (GO:0015996);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Domain of unknown function (DUF588)","CASP-like protein 2B1 OS=Eutrema halophilum OX=98038 PE=2 SV=1","S","Function unknown","PREDICTED: CASP-like protein 2B1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425)"]
["Bra004090","Bra004090",8.282317,407,11.583705,570,11.563635,522,24.709586,812,43.506347,1443,38.785635,1247,0.00243184723101232,1.12996903103334,"up","--","--","Molecular Function: translation elongation factor activity (GO:0003746);; Cellular Component: vacuole (GO:0005773);; Biological Process: translational elongation (GO:0006414);; ","--","--","--","--","Rubber elongation factor protein (REF)","REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana OX=3702 GN=At1g67360 PE=2 SV=1","S","Function unknown","PREDICTED: REF/SRPP-like protein At1g67360 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra015909","Bra015909",20.998771,1638,14.180509,1099,14.297933,992,9.724439,525,7.058231,379,8.281651,425,{"v":1.89689534539637e-10,"d":"1.90E-10"},-1.50406880621624,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: actin filament-based movement (GO:0030048);; ","--","--","--","--","Protein BYPASS1-related;; Protein of unknown function (DUF677)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103831919 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007)"]
["Bra008638","Bra008638",25.122117,2641,9.397922,1018,10.390056,1036,2.66243,212,5.568888,397,5.121692,370,{"v":1.42517627173048e-06,"d":"1.43E-06"},-2.17362538055835,"down","[N]","Cell motility","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: protein binding (GO:0005515);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Biological Process: DNA mediated transformation (GO:0009294);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: cellulose synthase activity (GO:0016759);; Biological Process: cell wall biogenesis (GO:0042546);; Molecular Function: glucomannan 4-beta-mannosyltransferase activity (GO:0047259);; Molecular Function: mannan synthase activity (GO:0051753);; ","--","--","--","--","Glycosyltransferase like family 2;; Glycosyl transferase family group 2;; Glycosyl transferase family 2;; Glycosyl transferase family 21","Probable mannan synthase 15 OS=Arabidopsis thaliana OX=3702 GN=CSLA15 PE=3 SV=2","M","Cell wall/membrane/envelope biogenesis","PREDICTED: probable mannan synthase 11 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra032852","Bra032852",2.902196,596,1.803684,387,1.71055,322,10.540634,1404,13.747564,1591,10.429962,1390,{"v":2.56539565619949e-13,"d":"2.57E-13"},1.70974392521555,"up","[L]","Replication, recombination and repair","Cellular Component: ubiquitin ligase complex (GO:0000151);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: kinesin binding (GO:0019894);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: localization (GO:0051179);; Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[S]","Function unknown","U-box domain;; Kinesin-associated protein (KAP)","U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: U-box domain-containing protein 45-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179)"]
["Bra004768","Bra004768",69.307487,1197,121.716011,2121,107.413612,1716,326.76059,3992,529.970215,6232,467.164886,5528,{"v":3.14590950390763e-05,"d":"3.15E-05"},1.53436601972702,"up","--","--","Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);; Cellular Component: extracellular region (GO:0005576);; Molecular Function: ion channel inhibitor activity (GO:0008200);; Biological Process: killing of cells of other organism (GO:0031640);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Scorpion toxin-like domain","Defensin-like protein 2 OS=Sinapis alba OX=3728 PE=1 SV=2","S","Function unknown","PREDICTED: defensin-like protein 195 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576);; molecular function: channel regulator activity (GO:0016247);; biological process: cell killing (GO:0001906);; biological process: multi-organism process (GO:0051704);; biological process: response to stimulus (GO:0050896)"]
["Bra018249","Bra018249",55.301814,3059,15.440918,871,22.653337,1096,10.436083,382,4.116708,152,4.804579,192,{"v":1.37003371310101e-06,"d":"1.37E-06"},-2.63745417265672,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: glycolytic process (GO:0006096);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to UV-B (GO:0010224);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Molecular Function: protein domain specific binding (GO:0019904);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","B-box zinc finger","B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2","S","Function unknown","PREDICTED: B-box zinc finger protein 25 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra016790","Bra016790",9.179443,241,6.003826,159,7.1966,175,5.17528,96,2.605514,47,1.557127,28,0.00207713166592385,-1.70287945016946,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: lipid transport (GO:0006869);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","--","Hydrophobic seed protein;; Protease inhibitor/seed storage/LTP family","14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1","S","Function unknown","BnaA08g24910D [Brassica napus]","cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Brassica_rapa_newGene_1837","--",43.899706,9860,57.28331,12913,62.787349,13006,33.072634,5224,16.70919,2525,18.340152,2813,{"v":2.29308306077798e-06,"d":"2.29E-06"},-1.7950513313681,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to chitin (GO:0010200);; ","--","--","[R]","General function prediction only","JmjC domain, hydroxylase;; jmjN domain;; C5HC2 zinc finger","Lysine-specific demethylase JMJ706 OS=Oryza sativa subsp. japonica OX=39947 GN=JMJ706 PE=2 SV=1","S","Function unknown","PREDICTED: lysine-specific demethylase JMJ706-like isoform X2 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra000089","Bra000089",22.291553,1308,19.270106,1281,24.882786,1313,39.469609,1671,81.002084,3254,91.610738,3715,0.00511259847239755,1.0684523435286,"up","[GR]","Carbohydrate transport and metabolism;; General function prediction only","Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: metabolic process (GO:0008152);; Molecular Function: phosphoglycolate phosphatase activity (GO:0008967);; ","--","--","[R]","General function prediction only","Haloacid dehalogenase-like hydrolase;; haloacid dehalogenase-like hydrolase;; HAD-hyrolase-like","Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana OX=3702 GN=SGPP PE=1 SV=2","S","Function unknown","PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)"]
["Bra040489","Bra040489",1.361384,133,0.741622,66,0.962049,79,0.496075,35,0.211716,15,0.151767,11,0.00106907320219977,-2.06656292705649,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: copper ion transport (GO:0006825);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: sucrose transmembrane transporter activity (GO:0008515);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: leaf senescence (GO:0010150);; Biological Process: sucrose transport (GO:0015770);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to salicylic acid stimulus (GO:0071446);; Biological Process: cellular response to osmotic stress (GO:0071470);; ","K15382|0|brp:103848657|K15382 solute carrier family 50 (sugar transporter) | (RefSeq) bidirectional sugar transporter SWEET13","--","[R]","General function prediction only","Sugar efflux transporter for intercellular exchange","Bidirectional sugar transporter SWEET13 OS=Arabidopsis thaliana OX=3702 GN=SWEET13 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: bidirectional sugar transporter SWEET13 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: transporter activity (GO:0005215);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: organelle (GO:0043226);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra040449","Bra040449",2.948784,740,1.659429,418,1.728448,400,7.612013,1228,14.1284,2056,15.768095,2047,{"v":4.25264908630836e-07,"d":"4.25E-07"},1.72416752021527,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Cellular Component: membrane (GO:0016020);; Biological Process: sesquiterpenoid biosynthetic process (GO:0016106);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: carotene catabolic process (GO:0016121);; Biological Process: xanthophyll catabolic process (GO:0016124);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity (GO:0045549);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: system development (GO:0048731);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K11159|0|brp:103862738|K11159 carotenoid cleavage dioxygenase | (RefSeq) carotenoid 9,10(9',10')-cleavage dioxygenase 1","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Retinal pigment epithelial membrane protein","Carotenoid 9,10(9&apos;,10&apos;)-cleavage dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=CCD1 PE=1 SV=2","Q","Secondary metabolites biosynthesis, transport and catabolism","BnaAnng12520D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502)"]
["Bra026607","Bra026607",1.081087,189,0.880699,156,0.949788,154,2.54029,314,3.938703,468,2.808675,336,0.000157658113126671,1.10461177970802,"up","[L]","Replication, recombination and repair","Molecular Function: DNA binding (GO:0003677);; Molecular Function: ATP-dependent DNA helicase activity (GO:0004003);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: response to stress (GO:0006950);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: synapsis (GO:0007129);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to gamma radiation (GO:0010332);; Biological Process: regulation of telomere maintenance (GO:0032204);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Biological Process: telomere maintenance in response to DNA damage (GO:0043247);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: nucleic acid metabolic process (GO:0090304);; ","K11273|0|brp:103854009|K11273 chromosome transmission fidelity protein 1 [EC:3.6.4.13] | (RefSeq) probable ATP-dependent DNA helicase DDX11","--","[L]","Replication, recombination and repair","DEAD_2;; Helicase C-terminal domain;; Type III restriction enzyme, res subunit","Regulator of telomere elongation helicase 1 homolog OS=Arabidopsis thaliana OX=3702 GN=RTEL1 PE=3 SV=1","L","Replication, recombination and repair","PREDICTED: probable ATP-dependent DNA helicase DDX11 isoform X1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra039945","Bra039945",3.974988,262,1.148608,103,0.92129,84,0.74014,52,0.766404,52,1.325072,58,0.00906578791334591,-1.39196153466703,"down","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: proline biosynthetic process (GO:0006561);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Biological Process: response to fructose (GO:0009750);; Biological Process: regulation of abscisic acid biosynthetic process (GO:0010115);; Molecular Function: xanthoxin dehydrogenase activity (GO:0010301);; Molecular Function: testosterone dehydrogenase [NAD(P)] activity (GO:0030283);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: single-organism process (GO:0044699);; Biological Process: diterpene phytoalexin precursor biosynthetic process pathway (GO:0051504);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[R]","General function prediction only","Enoyl-(Acyl carrier protein) reductase;; short chain dehydrogenase;; KR domain;; NAD dependent epimerase/dehydratase family","Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1","S","Function unknown","PREDICTED: short-chain dehydrogenase reductase 3a isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704)"]
["Bra003670","Bra003670",34.589991,6159,40.144951,7251,39.941172,6633,81.228102,10226,258.639507,31376,242.597379,29633,0.000293284883467363,1.7073589950019,"up","[C]","Energy production and conversion","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: protein binding (GO:0005515);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nitric oxide biosynthetic process (GO:0006809);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to symbiotic fungus (GO:0009610);; Molecular Function: nitrate reductase (NADH) activity (GO:0009703);; Molecular Function: heme binding (GO:0020037);; Biological Process: electron transport chain (GO:0022900);; Molecular Function: molybdenum ion binding (GO:0030151);; Biological Process: nitrate assimilation (GO:0042128);; Molecular Function: molybdopterin cofactor binding (GO:0043546);; Biological Process: cellular lipid catabolic process (GO:0044242);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: nitrate reductase [NAD(P)H] activity (GO:0050463);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Biological Process: oxidation-reduction process (GO:0055114);; ","K10534|0|brp:103830551|K10534 nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3] | (RefSeq) NR; nitrate reductase [NADH], clone PBNBR1412","Nitrogen metabolism (ko00910)","[C]","Energy production and conversion","Oxidoreductase molybdopterin binding domain;; Mo-co oxidoreductase dimerisation domain;; Oxidoreductase FAD-binding domain;; Oxidoreductase NAD-binding domain;; Cytochrome b5-like Heme/Steroid binding domain","Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus OX=3708 GN=NIA2 PE=2 SV=1","CI","Energy production and conversion;; Lipid transport and metabolism","PREDICTED: nitrate reductase [NADH], clone PBNBR1412 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra003007","Bra003007",65.169121,4615,119.25251,8522,123.929916,8119,24.652906,1236,32.932945,1589,26.285425,1276,{"v":6.83081509546472e-11,"d":"6.83E-11"},-2.40183107756292,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: luteolin O-methyltransferase activity (GO:0030744);; Molecular Function: quercetin 3-O-methyltransferase activity (GO:0030755);; Biological Process: methylation (GO:0032259);; Molecular Function: myricetin 3'-O-methyltransferase activity (GO:0033799);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: caffeate O-methyltransferase activity (GO:0047763);; Molecular Function: (iso)eugenol O-methyltransferase activity (GO:0050630);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","K13066|0|brp:103844878|K13066 caffeic acid 3-O-methyltransferase [EC:2.1.1.68] | (RefSeq) flavone 3'-O-methyltransferase 1-like","Phenylpropanoid biosynthesis (ko00940)","[R]","General function prediction only","O-methyltransferase;; Dimerisation domain;; AdoMet dependent proline di-methyltransferase","Flavone 3&apos;-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=OMT1 PE=1 SV=1","S","Function unknown","PREDICTED: flavone 3&apos;-O-methyltransferase 1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra026191","Bra026191",0.088352,10,0.014483,2,0.049462,5,0.760775,56,0.805584,57,0.646417,46,{"v":2.49048774445296e-05,"d":"2.49E-05"},2.9252136459093,"up","--","--","Biological Process: double-strand break repair via homologous recombination (GO:0000724);; Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: stomatal lineage progression (GO:0010440);; Biological Process: chiasma assembly (GO:0051026);; Biological Process: meiotic cell cycle (GO:0051321);; Biological Process: regulation of cell cycle (GO:0051726);; ","--","--","[D]","Cell cycle control, cell division, chromosome partitioning","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Cyclin-SDS OS=Arabidopsis thaliana OX=3702 GN=SDS PE=1 SV=2","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: cyclin-SDS [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra031818","Bra031818",0.257697,22,0.15911,15,0.126136,14,1.118733,61,1.168732,72,1.063316,60,0.000117705232178651,1.81451622645376,"up","--","--","Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: unidimensional cell growth (GO:0009826);; Molecular Function: transferase activity (GO:0016740);; Biological Process: protein N-linked glycosylation via asparagine (GO:0018279);; Biological Process: cellulose biosynthetic process (GO:0030244);; Cellular Component: membrane part (GO:0044425);; ","K12670|2.11051e-31|bna:106390371|K12670 oligosaccharyltransferase complex subunit beta | (RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit","N-Glycan biosynthesis (ko00510);; Protein processing in endoplasmic reticulum (ko04141)","[O]","Posttranslational modification, protein turnover, chaperones","Oligosaccharyltransferase 48 kDa subunit beta","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Arabidopsis thaliana OX=3702 GN=OST48 PE=2 SV=1","S","Function unknown","dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425)"]
["Bra026804","Bra026804",75.03374,9406,129.407279,16547,132.88087,15635,38.747263,3472,16.557211,1450,15.938364,1392,{"v":1.53188308907866e-08,"d":"1.53E-08"},-2.70009235146999,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: regulation of salicylic acid metabolic process (GO:0010337);; Biological Process: inorganic anion transport (GO:0015698);; Biological Process: proline transport (GO:0015824);; Biological Process: membrane organization (GO:0016044);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Molecular Function: substrate-specific transmembrane transporter activity (GO:0022891);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: regulation of programmed cell death (GO:0043067);; Biological Process: cellular catabolic process (GO:0044248);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: secondary metabolite biosynthetic process (GO:0044550);; Biological Process: intracellular transport (GO:0046907);; Molecular Function: transition metal ion binding (GO:0046914);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance catabolic process (GO:1901575);; ","--","--","--","--","MAC/Perforin domain","MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana OX=3702 GN=At1g14780 PE=2 SV=1","S","Function unknown","PREDICTED: MACPF domain-containing protein At1g14780-like [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488)"]
["Bra015663","Bra015663",3.074611,468,2.27284,349,2.249842,318,8.862031,949,7.207888,757,8.076984,851,{"v":4.13250040067355e-09,"d":"4.13E-09"},1.12704666015255,"up","--","--","--","--","--","--","--","Filament-like plant protein, long coiled-coil","Filament-like plant protein 1 OS=Arabidopsis thaliana OX=3702 GN=FPP1 PE=2 SV=1","S","Function unknown","PREDICTED: filament-like plant protein 1 isoform X2 [Brassica rapa]","--"]
["Bra032742","Bra032742",9.83744,384,17.265444,680,20.94256,756,4.85156,134,10.163917,270,9.318367,249,0.00251297911397428,-1.50322539838047,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi stack (GO:0005795);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: chlorophyll catabolic process (GO:0015996);; Molecular Function: heat shock protein binding (GO:0031072);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: response to cadmium ion (GO:0046686);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","DnaJ domain","Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: chaperone protein dnaJ 20, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699)"]
["Brassica_rapa_newGene_30066","--",23.175119,363,58.073582,918,62.397144,904,0,0,0,0,0,0,{"v":1.21547260325165e-26,"d":"1.22E-26"},-9.23388058624335,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K01188|4.74253e-30|brp:103859306|K01188 beta-glucosidase [EC:3.2.1.21] | (RefSeq) beta-glucosidase 23","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Beta-glucosidase 23 OS=Arabidopsis thaliana OX=3702 GN=BGLU23 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-glucosidase 23-like [Brassica oleracea var. oleracea]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra011663","Bra011663",5.538264,881,4.438398,713,4.553403,668,2.811634,318,1.399063,153,1.469169,160,{"v":5.05027454422507e-07,"d":"5.05E-07"},-1.8461556971367,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: intracellular part (GO:0044424);; Biological Process: single-organism process (GO:0044699);; ","--","--","--","--","Filament-like plant protein, long coiled-coil","Filament-like plant protein 5 OS=Arabidopsis thaliana OX=3702 GN=FPP5 PE=2 SV=2","S","Function unknown","PREDICTED: filament-like plant protein 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra027687","Bra027687",37.418301,523,25.372141,358,31.336624,405,95.42424,943,90.380188,860,110.994682,1063,{"v":1.18201814750373e-07,"d":"1.18E-07"},1.10693128992227,"up","--","--","Cellular Component: mitochondrial outer membrane (GO:0005741);; Biological Process: intracellular protein transport (GO:0006886);; Molecular Function: protein transporter activity (GO:0008565);; Cellular Component: membrane (GO:0016020);; ","K17771|6.63324e-27|brp:103838221|K17771 mitochondrial import receptor subunit TOM7 | (RefSeq) mitochondrial import receptor subunit TOM7-2","--","--","--","TOM7 family","Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana OX=3702 GN=TOM7-2 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: mitochondrial import receptor subunit TOM7-2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215)"]
["Bra005058","Bra005058",24.514887,2434,27.878627,2764,21.507745,1987,20.82445,1462,15.577388,1046,15.339083,1046,{"v":1.77590595035047e-05,"d":"1.78E-05"},-1.05768401623834,"down","[R]","General function prediction only","Molecular Function: phospholipase activity (GO:0004620);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phospholipid metabolic process (GO:0006644);; Biological Process: galactolipid metabolic process (GO:0019374);; Molecular Function: nutrient reservoir activity (GO:0045735);; Molecular Function: acyl-CoA hydrolase activity (GO:0047617);; Biological Process: response to other organism (GO:0051707);; ","--","--","[I]","Lipid transport and metabolism","Patatin-like phospholipase","Patatin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=PLP6 PE=2 SV=1","S","Function unknown","PREDICTED: patatin-like protein 6 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: nutrient reservoir activity (GO:0045735);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra007748","Bra007748",9.578061,1078,4.09335,493,5.304886,551,13.609456,1199,20.507212,1643,22.395971,1778,0.00232420268865375,1.08958986224039,"up","[H]","Coenzyme transport and metabolism","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: ferrochelatase activity (GO:0004325);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: mRNA processing (GO:0006397);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: heme biosynthetic process (GO:0006783);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: glucosinolate metabolic process (GO:0019760);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: positive regulation of translation (GO:0045727);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: defense response by callose deposition (GO:0052542);; ","K01772|0|brp:103842138|K01772 protoporphyrin/coproporphyrin ferrochelatase [EC:4.99.1.1 4.99.1.9] | (RefSeq) ferrochelatase-2, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","[H]","Coenzyme transport and metabolism","Ferrochelatase;; Chlorophyll A-B binding protein","Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FC2 PE=1 SV=1","H","Coenzyme transport and metabolism","PREDICTED: ferrochelatase-2, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052)"]
["Bra026733","Bra026733",0.980692,59,0.568759,35,0.91242,51,6.624654,281,12.371792,506,11.828422,486,{"v":6.89072507776605e-14,"d":"6.89E-14"},3.00416592097014,"up","--","--","Biological Process: pentose-phosphate shunt (GO:0006098);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: apoplast (GO:0048046);; Molecular Function: coenzyme binding (GO:0050662);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842866 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488)"]
["Bra014395","Bra014395",0.048469,6,0.045795,7,0,0,1.010936,73,2.897864,198,2.839031,204,{"v":2.46950066473771e-08,"d":"2.47E-08"},4.50365645383557,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: plant-type vacuole (GO:0000325);; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Molecular Function: cation binding (GO:0043169);; Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);; ","K01188|0|brp:103862779|K01188 beta-glucosidase [EC:3.2.1.21] | (RefSeq) beta-glucosidase 10-like","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Beta-glucosidase 10 OS=Arabidopsis thaliana OX=3702 GN=BGLU10 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-glucosidase 10-like isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488)"]
["Bra009134","Bra009134",17.474766,991,10.2095,579,13.373061,708,8.512811,342,7.305299,299,6.521464,327,{"v":2.63092003726969e-07,"d":"2.63E-07"},-1.25710429658333,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: gravitropism (GO:0009630);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: flower development (GO:0009908);; Biological Process: response to red light (GO:0010114);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: determination of dorsal/ventral asymmetry (GO:0048262);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1","K","Transcription","PREDICTED: transcription factor DIVARICATA [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra021758","Bra021758",37.079681,4576,22.282822,2775,25.985798,2967,13.268469,1159,11.051254,929,10.306202,872,{"v":1.69837161409852e-15,"d":"1.70E-15"},-1.81637789358371,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: polysaccharide catabolic process (GO:0000272);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cell cycle (GO:0007049);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: epidermis development (GO:0008544);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: pollen development (GO:0009555);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: embryo development (GO:0009790);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: seed maturation (GO:0010431);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: positive regulation of cell death (GO:0010942);; Biological Process: cell growth (GO:0016049);; Biological Process: cell differentiation (GO:0030154);; Biological Process: positive regulation of defense response (GO:0031349);; Biological Process: cellular component morphogenesis (GO:0032989);; Biological Process: response to lipid (GO:0033993);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular biosynthetic process (GO:0044249);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: external encapsulating structure organization (GO:0045229);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: meristem development (GO:0048507);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anther development (GO:0048653);; Biological Process: localization (GO:0051179);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: negative regulation of floral organ abscission (GO:0060862);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: response to alcohol (GO:0097305);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine Rich repeats (2 copies);; Leucine rich repeat;; Leucine Rich Repeat;; Phosphotransferase enzyme family","Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 OS=Arabidopsis thaliana OX=3702 GN=SOBIR1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179)"]
["Bra006741","Bra006741",1.566748,89,1.300392,74,1.277821,67,2.902664,116,10.741623,412,11.810674,456,0.000949214423623428,1.94223845226482,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Cellular Component: chloroplast (GO:0009507);; Biological Process: gravitropism (GO:0009630);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: flower development (GO:0009908);; Biological Process: response to red light (GO:0010114);; Biological Process: determination of dorsal/ventral asymmetry (GO:0048262);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1","K","Transcription","PREDICTED: transcription factor DIVARICATA-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra015521","Bra015521",2.947972,257,1.102344,100,1.669467,141,7.600271,483,8.400228,507,6.204381,379,0.000402982987780396,1.40558683154942,"up","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nematode (GO:0009624);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: cuticle development (GO:0042335);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: anther development (GO:0048653);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K13436|0|brp:103844018|K13436 pto-interacting protein 1 [EC:2.7.11.1] | (RefSeq) PTI1-like tyrosine-protein kinase 1","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PTI11 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: PTI1-like tyrosine-protein kinase 1 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007)"]
["Bra009145","Bra009145",2.279871,201,0.591288,53,0.671705,55,3.98649,249,5.603068,337,5.845618,353,0.00833644901801657,1.54117669366685,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: nucleus (GO:0005634);; Biological Process: DNA repair (GO:0006281);; Biological Process: DNA recombination (GO:0006310);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: cytokinin metabolic process (GO:0009690);; Biological Process: response to arsenic-containing substance (GO:0046685);; Molecular Function: cytokinin 7-beta-glucosyltransferase activity (GO:0047807);; Biological Process: seed development (GO:0048316);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: cytokinin 9-beta-glucosyltransferase activity (GO:0080062);; Biological Process: regulation of anthocyanin catabolic process (GO:1900000);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 76C4 OS=Arabidopsis thaliana OX=3702 GN=UGT76C4 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 76C4-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Brassica_rapa_newGene_4116","--",0.632681,56,0.286532,26,0.245774,20,1.935744,120,3.82046,221,2.527051,151,{"v":3.78724400813395e-05,"d":"3.79E-05"},2.16332608018021,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","--","--","--","--","No apical meristem (NAM) protein","Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana OX=3702 GN=JUB1 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor JUNGBRUNNEN 1-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra016615","Bra016615",58.480366,2497,111.082344,4785,114.383881,4517,31.784168,960,22.966505,668,23.568764,690,{"v":1.04591025808496e-09,"d":"1.05E-09"},-2.37518306407554,"down","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: glutathione transferase activity (GO:0004364);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to herbicide (GO:0009635);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Molecular Function: enzyme binding (GO:0019899);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Molecular Function: glutathione binding (GO:0043295);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; Biological Process: response to karrikin (GO:0080167);; Biological Process: regulation of response to red or far red light (GO:2000030);; ","K00799|4.91752e-159|brp:103835969|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase U26","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, N-terminal domain","Glutathione S-transferase U26 OS=Arabidopsis thaliana OX=3702 GN=GSTU26 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase U26 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra015291","Bra015291",32.925497,11166,33.081878,11390,34.830138,11085,20.340556,4899,22.780924,5272,19.406141,4511,{"v":1.86004646803743e-13,"d":"1.86E-13"},-1.24782071517566,"down","[V]","Defense mechanisms","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Cellular Component: plant-type vacuole (GO:0000325);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Molecular Function: sulfonylurea receptor activity (GO:0008281);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular potassium ion homeostasis (GO:0030007);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: amino acid import (GO:0043090);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter transmembrane region;; ABC transporter;; 50S ribosome-binding GTPase;; AAA domain, putative AbiEii toxin, Type IV TA system;; P-loop containing region of AAA domain;; Dynamin family","ABC transporter C family member 5 OS=Arabidopsis thaliana OX=3702 GN=ABCC5 PE=2 SV=2","V","Defense mechanisms","PREDICTED: ABC transporter C family member 5 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215)"]
["Bra015812","Bra015812",29.724065,4487,16.068698,2461,12.706493,1789,5.214943,560,9.309378,960,10.018385,1088,{"v":3.17964837760469e-05,"d":"3.18E-05"},-1.69487781148242,"down","[K]","Transcription","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: activation of MAPKK activity (GO:0000186);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: signal complex assembly (GO:0007172);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to bacterium (GO:0009617);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: endosperm development (GO:0009960);; Biological Process: meristem initiation (GO:0010014);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: procambium histogenesis (GO:0010067);; Biological Process: regulation of floral meristem growth (GO:0010080);; Biological Process: xylem development (GO:0010089);; Biological Process: lateral root morphogenesis (GO:0010102);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: microsporocyte differentiation (GO:0010480);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: beta-amylase activity (GO:0016161);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: cell cycle process (GO:0022402);; Biological Process: signal transduction by protein phosphorylation (GO:0023014);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: protein self-association (GO:0043621);; Biological Process: pectin catabolic process (GO:0045490);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: gametophyte development (GO:0048229);; Biological Process: leaf development (GO:0048366);; Biological Process: root hair elongation (GO:0048767);; Biological Process: specification of floral organ number (GO:0048833);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: regulation of seed maturation (GO:2000034);; ","K00924|0|brp:103832028|K00924 [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine Rich repeat","Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3","S","Function unknown","PREDICTED: receptor protein kinase CLAVATA1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: reproduction (GO:0000003);; cellular component: membrane part (GO:0044425)"]
["Bra003682","Bra003682",12.081001,859,9.877478,708,11.135761,730,1.05285,56,0.033494,3,0.613368,33,{"v":8.51887559529532e-09,"d":"8.52E-09"},-4.21742298246201,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: O-methyltransferase activity (GO:0008171);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: luteolin O-methyltransferase activity (GO:0030744);; Molecular Function: quercetin 3-O-methyltransferase activity (GO:0030755);; Biological Process: methylation (GO:0032259);; Molecular Function: myricetin 3'-O-methyltransferase activity (GO:0033799);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: caffeate O-methyltransferase activity (GO:0047763);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","K13066|0|brp:103830566|K13066 caffeic acid 3-O-methyltransferase [EC:2.1.1.68] | (RefSeq) indole glucosinolate O-methyltransferase 1-like","Phenylpropanoid biosynthesis (ko00940)","[R]","General function prediction only","O-methyltransferase;; Dimerisation domain","Indole glucosinolate O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=IGMT1 PE=1 SV=1","S","Function unknown","PREDICTED: indole glucosinolate O-methyltransferase 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra040939","Bra040939",2.789368,313,1.594045,181,1.334804,148,5.00274,404,6.28072,489,7.797281,624,0.000803939378453898,1.2024798764925,"up","[E]","Amino acid transport and metabolism","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: cell wall (GO:0005618);; Cellular Component: vacuole (GO:0005773);; Biological Process: proteolysis (GO:0006508);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; ","K16297|0|brp:103847896|K16297 serine carboxypeptidase-like clade II [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 42","--","[OE]","Posttranslational modification, protein turnover, chaperones;; Amino acid transport and metabolism","Serine carboxypeptidase","Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana OX=3702 GN=SCPL42 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: serine carboxypeptidase-like 42 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra006310","Bra006310",1.231602,89,1.253055,91,1.115248,75,5.909755,301,6.83697,335,7.457851,367,{"v":4.67257121966198e-14,"d":"4.67E-14"},1.90626632312363,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: negative regulation of protein catabolic process (GO:0042177);; Cellular Component: cell part (GO:0044464);; ","--","--","--","--","F-box domain","F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN=At4g22390 PE=2 SV=3","--","--","F-box protein At4g22390-like [Brassica napus] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Brassica_rapa_newGene_19918","--",2.904826,103,1.964914,71,1.961482,65,0.474847,12,0.701993,17,0,0,0.00984177031514328,-2.51769437740382,"down","--","--","--","--","--","--","--","Neprosin activation peptide","--","--","--","PREDICTED: uncharacterized protein LOC103858125 [Brassica rapa]","--"]
["Bra026062","Bra026062",15.049455,1516,35.730598,3631,39.578117,3687,4.398171,314,1.327819,92,0.821882,57,{"v":1.92672448176034e-09,"d":"1.93E-09"},-4.0048903826027,"down","[GEPR]","Carbohydrate transport and metabolism;; Amino acid transport and metabolism;; Inorganic ion transport and metabolism;; General function prediction only","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Biological Process: proline transport (GO:0015824);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: cellular response to salt stress (GO:0071472);; Biological Process: organic substance transport (GO:0071702);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Organic cation/carnitine transporter 6 OS=Arabidopsis thaliana OX=3702 GN=OCT6 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: organic cation/carnitine transporter 6-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425)"]
["Bra002924","Bra002924",3.07297,286,2.047317,180,2.254064,194,6.955825,456,9.28626,597,13.078892,766,{"v":1.29861863315613e-05,"d":"1.30E-05"},1.40725281242853,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103844964 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra017801","Bra017801",0.293112,29,0.267962,28,0.062793,7,2.019721,145,3.24418,221,2.783243,185,{"v":2.19817282390759e-07,"d":"2.20E-07"},2.91981971117934,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","Remorin, C-terminal region","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103862518 isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)"]
["Bra020684","Bra020684",27.885167,1018,50.232452,2107,41.30745,1395,17.370715,449,14.806944,384,15.468889,424,{"v":6.63296118906148e-07,"d":"6.63E-07"},-1.87746590899836,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to chitin (GO:0010200);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger;; zinc-RING finger domain;; Zinc finger, C3HC4 type (RING finger)","Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 OS=Arabidopsis thaliana OX=3702 GN=At5g05130 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra019009","Bra019009",6.194606,182,2.314775,69,8.498389,231,25.43523,528,29.237574,584,40.164852,807,0.000492246513422623,1.83826710006027,"up","--","--","Cellular Component: mitochondrial intermembrane space (GO:0005758);; Biological Process: copper ion transport (GO:0006825);; Biological Process: circadian rhythm (GO:0007623);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: copper chaperone activity (GO:0016531);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871161 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: rhythmic process (GO:0048511);; molecular function: binding (GO:0005488);; molecular function: metallochaperone activity (GO:0016530)"]
["Bra020836","Bra020836",309.240143,29758,733.444702,71223,759.320007,67594,193.606796,13181,205.888474,13493,198.28064,13075,{"v":7.5767841717894e-07,"d":"7.58E-07"},-2.11400448623178,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to UV (GO:0009411);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: response to auxin (GO:0009733);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: membrane (GO:0016020);; Biological Process: monoterpenoid biosynthetic process (GO:0016099);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: flavonoid 3'-monooxygenase activity (GO:0016711);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: cellular response to extracellular stimulus (GO:0031668);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Ferruginol synthase OS=Salvia miltiorrhiza OX=226208 GN=CYP76AH1 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 71A1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987)"]
["Bra014385","Bra014385",1.60026,121,1.267163,97,0.940324,66,3.63612,194,3.404929,175,4.637386,240,0.00192232997033611,1.05211412444706,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: xylan metabolic process (GO:0045491);; ","K15032|0|brp:103862768|K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) uncharacterized LOC103862768","--","[KR]","Transcription;; General function prediction only","mTERF","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103862768 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra014425","Bra014425",4.870413,666,4.692502,666,4.49638,567,1.757607,180,2.073551,217,1.488008,153,{"v":1.80759633148733e-14,"d":"1.81E-14"},-1.81923364999235,"down","[I]","Lipid transport and metabolism","Molecular Function: triglyceride lipase activity (GO:0004806);; Biological Process: lipid metabolic process (GO:0006629);; ","--","--","--","--","Lipase (class 3)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103862815 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699)"]
["Bra001155","Bra001155",21.786382,2434,23.271693,2563,26.649437,2663,21.049506,1648,9.899209,745,9.213293,701,0.00127855178233518,-1.33966647792149,"down","[T]","Signal transduction mechanisms","Cellular Component: protein phosphatase type 1 complex (GO:0000164);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to chitin (GO:0010200);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; ","K06269|0|brp:103859101|K06269 serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] | (RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9","mRNA surveillance pathway (ko03015)","[TR]","Signal transduction mechanisms;; General function prediction only","Calcineurin-like phosphoesterase;; Serine-threonine protein phosphatase N-terminal domain","Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana OX=3702 GN=TOPP9 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 9 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra015660","Bra015660",46.456821,2137,76.56398,3553,105.243599,4477,50.951748,1658,24.657707,773,19.807585,625,0.000755275375905948,-1.75502833052825,"down","--","--","--","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana OX=3702 GN=ERF013 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF013 [Brassica rapa]","--"]
["Bra011832","Bra011832",0.524829,89,0.348629,72,0.473351,73,1.728067,187,2.410924,275,2.784012,315,{"v":2.39549056807062e-06,"d":"2.40E-06"},1.6536922989382,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Protein of unknown function (DUF632);; Protein of unknown function (DUF630)","Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103852362 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra023297","Bra023297",19.053456,5219,26.723774,7948,28.705415,7560,17.195078,3071,19.332723,3045,19.437278,2899,{"v":2.54508183804859e-05,"d":"2.55E-05"},-1.26107539461651,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: serine-type endopeptidase activity (GO:0004252);; Biological Process: proteolysis (GO:0006508);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Cellular Component: external side of plasma membrane (GO:0009897);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: regulation of cell proliferation (GO:0042127);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Cellular Component: apoplast (GO:0048046);; Biological Process: mucilage metabolic process involved in seed coat development (GO:0048359);; Biological Process: mucilage extrusion from seed coat (GO:0080001);; ","--","--","--","--","Subtilase family;; Peptidase inhibitor I9;; PA domain","Subtilisin-like protease SBT3.5 OS=Arabidopsis thaliana OX=3702 GN=SBT3.5 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","BnaC05g51310D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414)"]
["Bra040178","Bra040178",40.511725,2236,13.931559,774,15.414592,786,97.338465,3752,173.222658,6461,179.470524,6697,{"v":6.00630827522278e-06,"d":"6.01E-06"},2.09162879366168,"up","--","--","Biological Process: cell morphogenesis (GO:0000902);; Biological Process: regulation of cell shape during vegetative growth phase (GO:0000903);; Molecular Function: SNAP receptor activity (GO:0005484);; Cellular Component: nucleus (GO:0005634);; Cellular Component: late endosome (GO:0005770);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: amino acid transport (GO:0006865);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: Golgi to vacuole transport (GO:0006896);; Biological Process: membrane fusion (GO:0006944);; Biological Process: Golgi organization (GO:0007030);; Biological Process: vacuole organization (GO:0007033);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: amyloplast organization (GO:0009660);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative gravitropism (GO:0009959);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cell growth (GO:0016049);; Biological Process: endosomal transport (GO:0016197);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Cellular Component: trans-Golgi network transport vesicle (GO:0030140);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: small molecule biosynthetic process (GO:0044283);; Biological Process: late endosome to vacuole transport (GO:0045324);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: negative regulation of cellular defense response (GO:0051245);; Biological Process: callose deposition in cell wall (GO:0052543);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Syntaxin-like protein;; SNARE domain;; Syntaxin","Syntaxin-23 OS=Arabidopsis thaliana OX=3702 GN=SYP23 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: syntaxin-23-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007)"]
["Bra002397","Bra002397",4.382798,69,5.381124,86,5.460117,80,12.793446,143,16.957821,182,20.610014,222,0.00353135618402288,1.1289271292319,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103845564 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra030755","Bra030755",3.868526,238,14.20566,882,13.111125,746,3.551973,155,2.598598,109,1.747289,74,{"v":7.78496726351018e-05,"d":"7.78E-05"},-2.40982419318955,"down","--","--","Cellular Component: protein storage vacuole (GO:0000326);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: megasporogenesis (GO:0009554);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to absence of light (GO:0009646);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: kinase activity (GO:0016301);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: regulation of ion transport (GO:0043269);; Biological Process: macromolecule modification (GO:0043412);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: system development (GO:0048731);; ","--","--","--","--","C2 domain","Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1","S","Function unknown","PREDICTED: protein SRC2 homolog [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra036282","Bra036282",1.469569,260,0.920579,172,1.021663,166,0.622147,90,0.282981,40,0.90462,80,0.000678382898594326,-1.49461831846956,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: response to hypoxia (GO:0001666);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: sucrose biosynthetic process (GO:0005986);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to cold (GO:0009409);; Biological Process: response to flooding (GO:0009413);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: nodulation (GO:0009877);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: suspensor development (GO:0010098);; Biological Process: seed maturation (GO:0010431);; Biological Process: response to mannitol (GO:0010555);; Molecular Function: sucrose synthase activity (GO:0016157);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: response to cadmium ion (GO:0046686);; ","K00695|0|brp:103836763|K00695 sucrose synthase [EC:2.4.1.13] | (RefSeq) sucrose synthase 3","Starch and sucrose metabolism (ko00500)","[M]","Cell wall/membrane/envelope biogenesis","Sucrose synthase;; Glycosyl transferases group 1;; Glycosyl transferases group 1","Sucrose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=SUS3 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: sucrose synthase 3 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; molecular function: catalytic activity (GO:0003824)"]
["Bra001045","Bra001045",12.157228,1569,10.528612,1441,13.221743,1556,8.372202,776,6.742434,626,8.481691,754,{"v":6.05063184846804e-09,"d":"6.05E-09"},-1.13300914178692,"down","--","--","Molecular Function: GTPase activator activity (GO:0005097);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: positive regulation of GTPase activity (GO:0032851);; ","K19944|0|brp:103858958|K19944 TBC1 domain family member 10 | (RefSeq) ecotropic viral integration site 5 protein homolog","--","[R]","General function prediction only","Rab-GTPase-TBC domain","--","S","Function unknown","PREDICTED: ecotropic viral integration site 5 protein homolog [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000304","Bra000304",1.992493,139,2.601277,190,1.509904,112,6.549352,332,6.440298,312,6.580586,311,0.000985594601271957,1.04529780306245,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: positive regulation of cell proliferation (GO:0008284);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: plastid (GO:0009536);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: response to organic substance (GO:0010033);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: carotenoid metabolic process (GO:0016116);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cytosolic transport (GO:0016482);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: histone lysine methylation (GO:0034968);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: ion binding (GO:0043167);; Molecular Function: DNA binding (GO:0043566);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: single-organism transport (GO:0044765);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: gametophyte development (GO:0048229);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: phyllome development (GO:0048827);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance transport (GO:0071702);; Cellular Component: cell periphery (GO:0071944);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K13155|8.28958e-178|brp:103858068|K13155 U11/U12 small nuclear ribonucleoprotein 35 kDa protein | (RefSeq) U11/U12 small nuclear ribonucleoprotein 35 kDa protein","--","[A]","RNA processing and modification","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP35 PE=1 SV=1","S","Function unknown","PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra037568","Bra037568",2.828498,228,2.140834,174,1.177906,88,6.059252,345,9.544127,523,8.594087,474,0.000570708096290874,1.40398209676131,"up","[D]","Cell cycle control, cell division, chromosome partitioning","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to chitin (GO:0010200);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: innate immune response (GO:0045087);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);; ","--","--","--","--","U-box domain","U-box domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=PUB29 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: U-box domain-containing protein 29-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)"]
["Bra007743","Bra007743",56.89915,6733,64.952671,6208,35.757423,3926,24.096361,2048,17.672287,1413,22.747862,1918,{"v":9.62547594384798e-11,"d":"9.63E-11"},-1.66341291388416,"down","[C]","Energy production and conversion","Cellular Component: extracellular region (GO:0005576);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: vacuole (GO:0005773);; Molecular Function: primary amine oxidase activity (GO:0008131);; Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cytokinin catabolic process (GO:0009823);; Biological Process: xylem development (GO:0010089);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: inflorescence development (GO:0010229);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: cytokinin dehydrogenase activity (GO:0019139);; Biological Process: electron transport chain (GO:0022900);; Biological Process: secretion by cell (GO:0032940);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: meristem development (GO:0048507);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; ","K00279|0|brp:103842132|K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 6","Zeatin biosynthesis (ko00908)","[C]","Energy production and conversion","Cytokinin dehydrogenase 1, FAD and cytokinin binding;; FAD binding domain","Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana OX=3702 GN=CKX6 PE=2 SV=2","C","Energy production and conversion","PREDICTED: cytokinin dehydrogenase 6 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra031132","Bra031132",68.113184,5882,54.334382,4638,55.314458,4340,11.48841,690,5.009843,293,6.112103,359,{"v":5.90865987229527e-22,"d":"5.91E-22"},-3.43501120293056,"down","[E]","Amino acid transport and metabolism","Biological Process: regulation of cell growth by extracellular stimulus (GO:0001560);; Molecular Function: L-alanine:2-oxoglutarate aminotransferase activity (GO:0004021);; Molecular Function: L-aspartate:2-oxoglutarate aminotransferase activity (GO:0004069);; Molecular Function: cystathionine beta-lyase activity (GO:0004121);; Molecular Function: L-tyrosine:2-oxoglutarate aminotransferase activity (GO:0004838);; Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: L-phenylalanine catabolic process (GO:0006559);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: tyrosine catabolic process (GO:0006572);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to microbial phytotoxin (GO:0010188);; Biological Process: vitamin E biosynthetic process (GO:0010189);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: membrane (GO:0016020);; Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Molecular Function: nicotianamine aminotransferase activity (GO:0033855);; Biological Process: 1-aminocyclopropane-1-carboxylate biosynthetic process (GO:0042218);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: apoplast (GO:0048046);; Biological Process: adventitious root development (GO:0048830);; Molecular Function: L-tryptophan:2-oxoglutarate aminotransferase activity (GO:0050362);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: S-alkylthiohydroximate lyase activity (GO:0080108);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","K00815|0|brp:103842591|K00815 tyrosine aminotransferase [EC:2.6.1.5] | (RefSeq) tyrosine aminotransferase-like","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Cysteine and methionine metabolism (ko00270);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Aminotransferase class I and II;; Beta-eliminating lyase","Tyrosine aminotransferase OS=Arabidopsis thaliana OX=3702 GN=TAT PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: tyrosine aminotransferase-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; cellular component: membrane (GO:0016020);; cellular component: extracellular region (GO:0005576);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra033051","Bra033051",1.734792,173,6.159334,620,5.119964,473,1.238875,88,0.16755,12,0.029664,3,0.0014120712110694,-3.06451964090941,"down","[MDT]","Cell wall/membrane/envelope biogenesis;; Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: gamete generation (GO:0007276);; Biological Process: biosynthetic process (GO:0009058);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: response to chemical (GO:0042221);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: gametophyte development (GO:0048229);; Biological Process: shoot system development (GO:0048367);; Biological Process: meristem development (GO:0048507);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Domain associated at C-terminal with AAA;; ATPase family associated with various cellular activities (AAA)","AAA-ATPase At3g28510 OS=Arabidopsis thaliana OX=3702 GN=At3g28510 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: AAA-ATPase At3g28510-like isoform X1 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle part (GO:0044422)"]
["Brassica_rapa_newGene_7297","--",2.315674,84,2.300203,83,2.489943,82,8.465043,212,6.592354,159,9.5658,235,0.000208569978565575,1.20600053345896,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra007413","Bra007413",51.791387,2926,117.584622,6689,114.87749,6044,18.063355,738,14.355205,558,14.646973,579,{"v":2.19650516595454e-13,"d":"2.20E-13"},-3.06053941424863,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein folding (GO:0006457);; Biological Process: iron ion transport (GO:0006826);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: nitric oxide mediated signal transduction (GO:0007263);; Biological Process: response to heat (GO:0009408);; Biological Process: pollen development (GO:0009555);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: nitrate transport (GO:0015706);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: defense response to virus (GO:0051607);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 69 OS=Arabidopsis thaliana OX=3702 GN=WRKY69 PE=2 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 69 isoform X2 [Brassica rapa] ","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra036010","Bra036010",79.897421,9396,109.43306,12887,116.691372,12635,89.600894,7652,44.340725,3581,44.704123,3616,0.00221014767000491,-1.27837401895111,"down","[R]","General function prediction only","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of salicylic acid metabolic process (GO:0010337);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: ATPase-coupled arsenite transmembrane transporter activity (GO:0015446);; Biological Process: arsenite transport (GO:0015700);; Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity (GO:0016756);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: cadmium ion binding (GO:0046870);; Biological Process: phytochelatin biosynthetic process (GO:0046938);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: phytochelatin transmembrane transporter activity (GO:0071992);; Biological Process: phytochelatin transmembrane transport (GO:0071994);; ","--","--","[P]","Inorganic ion transport and metabolism","Phytochelatin synthase;; Domain of unknown function (DUF1984)","Glutathione gamma-glutamylcysteinyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=PCS1 PE=1 SV=1","S","Function unknown","glutathione gamma-glutamylcysteinyltransferase 1 [Brassica napus] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: multi-organism process (GO:0051704)"]
["Bra016252","Bra016252",130.052942,5904,312.043848,14275,295.638678,12346,88.241324,2866,117.015682,3597,122.41899,3845,0.000118561822889387,-1.69379285409358,"down","[O]","Posttranslational modification, protein turnover, chaperones","--","K00799|6.16351e-160|brp:103831538|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase U12","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, C-terminal domain","Glutathione S-transferase U12 OS=Arabidopsis thaliana OX=3702 GN=GSTU12 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase U12 [Brassica rapa] ","--"]
["Bra017872","Bra017872",16.514665,2530,27.399138,4312,26.932599,3143,9.951581,857,7.98838,753,11.00617,801,{"v":1.21671939090268e-11,"d":"1.22E-11"},-2.08808090008983,"down","[P]","Inorganic ion transport and metabolism","--","K00860|0|brp:103862607|K00860 adenylylsulfate kinase [EC:2.7.1.25] | (RefSeq) adenylyl-sulfate kinase 2, chloroplastic-like","Purine metabolism (ko00230);; Sulfur metabolism (ko00920)","[P]","Inorganic ion transport and metabolism","Adenylylsulphate kinase","Adenylyl-sulfate kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APK2 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: adenylyl-sulfate kinase 2, chloroplastic-like isoform X1 [Brassica rapa]","--"]
["Bra032448","Bra032448",0.713024,160,0.968271,154,1.49515,264,2.957605,483,3.545854,506,3.246901,508,0.00116942018174191,1.25867001464858,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103843582 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra021909","Bra021909",0.193485,7,0.230081,8,0,0,1.90399,43,9.073178,195,10.673558,230,{"v":7.81654730109849e-06,"d":"7.82E-06"},4.1021026699667,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: photosystem I (GO:0009522);; Cellular Component: photosystem II (GO:0009523);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to fructose (GO:0009750);; Biological Process: photosynthesis, light harvesting (GO:0009765);; Biological Process: photosynthesis, light harvesting in photosystem II (GO:0009769);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to red light (GO:0010114);; Biological Process: response to far red light (GO:0010218);; Cellular Component: plastoglobule (GO:0010287);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: chlorophyll binding (GO:0016168);; Biological Process: protein-chromophore linkage (GO:0018298);; Cellular Component: light-harvesting complex (GO:0030076);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; ","K08912|1.44656e-111|brp:103828920|K08912 light-harvesting complex II chlorophyll a/b binding protein 1 | (RefSeq) chlorophyll a-b binding protein 1, chloroplastic-like","Photosynthesis - antenna proteins (ko00196)","--","--","Chlorophyll A-B binding protein","Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba OX=3728 GN=CAB1 PE=3 SV=1","--","--","PREDICTED: chlorophyll a-b binding protein 1, chloroplastic-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra023151","Bra023151",14.035682,1825,24.940873,4113,23.85439,3709,6.421416,744,5.29176,536,4.900591,493,{"v":1.28880844303592e-08,"d":"1.29E-08"},-2.45783078256837,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: Golgi transport complex (GO:0017119);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: cytoplasmic vesicle (GO:0031410);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; ","--","--","--","--","PA domain","Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana OX=3702 GN=VSR6 PE=2 SV=3","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: vacuolar-sorting receptor 6 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: macromolecular complex (GO:0032991)"]
["Bra019464","Bra019464",27.637037,2684,47.841105,4705,52.855285,4771,3.484268,246,0.672133,54,0.611764,47,{"v":8.16832396715982e-14,"d":"8.17E-14"},-4.8197407650269,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: double-strand break repair via homologous recombination (GO:0000724);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: RNA processing (GO:0006396);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Cellular Component: chloroplast (GO:0009507);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to wounding (GO:0009611);; Biological Process: gravitropism (GO:0009630);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to salt stress (GO:0009651);; Biological Process: far-red light signaling pathway (GO:0010018);; Biological Process: wax biosynthetic process (GO:0010025);; Biological Process: response to ionizing radiation (GO:0010212);; Biological Process: suberin biosynthetic process (GO:0010345);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone methylation (GO:0016571);; Biological Process: protein deubiquitination (GO:0016579);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627);; Biological Process: positive regulation of circadian rhythm (GO:0042753);; Biological Process: transcription factor import into nucleus (GO:0042991);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: long-chain-fatty-acyl-CoA reductase activity (GO:0050062);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: fatty-acyl-CoA reductase (alcohol-forming) activity (GO:0080019);; ","K13356|0|brp:103873613|K13356 alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] | (RefSeq) probable fatty acyl-CoA reductase 4","Cutin, suberine and wax biosynthesis (ko00073);; Peroxisome (ko04146)","[I]","Lipid transport and metabolism","Male sterility protein;; Male sterility protein;; NAD dependent epimerase/dehydratase family","Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana OX=3702 GN=FAR4 PE=1 SV=1","S","Function unknown","PREDICTED: probable fatty acyl-CoA reductase 4 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179)"]
["Bra034822","Bra034822",1.618733,67,3.456556,145,3.451939,132,7.640486,224,32.110474,904,22.969784,651,0.00073709653211347,2.13051319016187,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: membrane (GO:0016020);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: innate immune response (GO:0045087);; Biological Process: defense response to virus (GO:0051607);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","Late embryogenesis abundant protein","NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1","S","Function unknown","PREDICTED: NDR1/HIN1-like protein 12 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra017213","Bra017213",1.130972,96,0.964161,95,1.132508,100,3.447555,244,5.195202,359,5.740189,397,{"v":7.28108660322216e-07,"d":"7.28E-07"},1.69136361898544,"up","[K]","Transcription","Molecular Function: plastid sigma factor activity (GO:0001053);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA-templated transcription, initiation (GO:0006352);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosynthesis (GO:0015979);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cell differentiation (GO:0030154);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cellular response to blue light (GO:0071483);; Biological Process: seedling development (GO:0090351);; ","--","--","--","--","Sigma-70 region 3;; Sigma-70 region 2;; Sigma-70, region 4","RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIGF PE=1 SV=1","K","Transcription","PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: protein binding transcription factor activity (GO:0000988);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra016330","Bra016330",415.628165,44783,483.491325,52527,499.018519,49920,211.716441,16024,155.550671,11242,147.826712,10837,{"v":5.53222305234387e-15,"d":"5.53E-15"},-1.99525110855516,"down","[C]","Energy production and conversion","Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity (GO:0004028);; Molecular Function: aldehyde dehydrogenase (NAD) activity (GO:0004029);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00128|0|brp:103835648|K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | (RefSeq) aldehyde dehydrogenase family 2 member B7, mitochondrial","Glycolysis / Gluconeogenesis (ko00010);; Pentose and glucuronate interconversions (ko00040);; Ascorbate and aldarate metabolism (ko00053);; Fatty acid degradation (ko00071);; Valine, leucine and isoleucine degradation (ko00280);; Lysine degradation (ko00310);; Arginine and proline metabolism (ko00330);; Histidine metabolism (ko00340);; Tryptophan metabolism (ko00380);; beta-Alanine metabolism (ko00410);; Glycerolipid metabolism (ko00561);; Pyruvate metabolism (ko00620);; Limonene and pinene degradation (ko00903)","[C]","Energy production and conversion","Aldehyde dehydrogenase family","Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH2B7 PE=1 SV=2","C","Energy production and conversion","PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra017413","Bra017413",1.251079,79,0.774378,49,0.753191,44,3.562859,158,4.376801,187,4.715358,202,{"v":2.95283198117224e-06,"d":"2.95E-06"},1.61073095481069,"up","[S]","Function unknown","Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Putative small multi-drug export protein","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103839441 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra007453","Bra007453",5.478099,1086,5.242281,1049,1.887867,347,0.311436,44,1.164856,158,0.209795,29,{"v":7.5890703300122e-06,"d":"7.59E-06"},-3.12566724237392,"down","[K]","Transcription","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: binding (GO:0005488);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: transport (GO:0006810);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to hormone (GO:0009725);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: flower development (GO:0009908);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: kinase activity (GO:0016301);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: cellular response to stress (GO:0033554);; Molecular Function: signaling receptor activity (GO:0038023);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: innate immune response (GO:0045087);; Biological Process: stamen development (GO:0048443);; Biological Process: meristem development (GO:0048507);; Biological Process: regulation of immune response (GO:0050776);; Biological Process: detection of stimulus (GO:0051606);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","Receptor-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=RLP7 PE=3 SV=2","S","Function unknown","PREDICTED: receptor-like protein 12 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; biological process: immune system process (GO:0002376)"]
["Bra016206","Bra016206",14.840761,2768,16.398075,3087,12.301388,2123,8.262788,1091,5.17352,658,4.756906,608,{"v":1.21391717392999e-08,"d":"1.21E-08"},-1.78041517358169,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calcium-dependent protein serine/threonine phosphatase activity (GO:0004723);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ion transport (GO:0006811);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: nitrogen compound transport (GO:0071705);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Salt stress response/antifungal","Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: cysteine-rich receptor-like protein kinase 3 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra024404","Bra024404",10.094692,706,2.90774,205,4.647525,301,20.757416,1026,34.246948,1629,38.388809,1838,0.000193641878750053,1.82224972208185,"up","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to iron ion (GO:0010039);; Biological Process: stomatal lineage progression (GO:0010440);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: seed development (GO:0048316);; Biological Process: shoot system development (GO:0048367);; Biological Process: response to freezing (GO:0050826);; Biological Process: protein modification by small protein removal (GO:0070646);; Biological Process: cellular response to inorganic substance (GO:0071241);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH93 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: metabolic process (GO:0008152);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra017541","Bra017541",8.695897,259,6.690835,201,8.895478,245,5.667166,120,3.167035,65,2.246763,46,0.000639438607915635,-1.60727148557125,"down","--","--","--","--","--","--","--","AWPM-19-like family","Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103839594 [Brassica rapa]","--"]
["Bra016941","Bra016941",1.205742,87,1.762923,128,1.674667,111,1.029414,53,0.247248,13,0.390622,20,0.00621904063356587,-1.84993411423045,"down","--","--","Cellular Component: cell part (GO:0044464);; ","K17479|0|brp:103865877|K17479 glutaredoxin domain-containing cysteine-rich protein 1 | (RefSeq) uncharacterized protein At5g39865","--","[O]","Posttranslational modification, protein turnover, chaperones","Glutaredoxin","Uncharacterized protein At5g39865 OS=Arabidopsis thaliana OX=3702 GN=At5g39865 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein At5g39865 [Brassica rapa]","cellular component: cell part (GO:0044464)"]
["Bra015010","Bra015010",5.620226,599,3.707035,399,3.299547,325,9.326176,702,13.682661,993,14.83106,1081,0.000872567417316306,1.03279815056607,"up","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: guanyl-nucleotide exchange factor activity (GO:0005085);; Molecular Function: Rho guanyl-nucleotide exchange factor activity (GO:0005089);; Cellular Component: nucleus (GO:0005634);; Biological Process: membrane fusion (GO:0006944);; Biological Process: pattern specification process (GO:0007389);; Biological Process: asymmetric cell division (GO:0008356);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: regulation of meristem growth (GO:0010075);; Cellular Component: apical plasma membrane (GO:0016324);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell wall organization (GO:0071555);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","--","--","--","--","PRONE (Plant-specific Rop nucleotide exchanger)","Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2","S","Function unknown","PREDICTED: rop guanine nucleotide exchange factor 1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: guanyl-nucleotide exchange factor activity (GO:0005085);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra038000","Bra038000",0.319363,64,0.384915,71,0.408995,69,1.279854,179,4.782726,592,5.092515,672,{"v":3.20030390109073e-06,"d":"3.20E-06"},2.61435768888837,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: microtubule motor activity (GO:0003777);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: microtubule associated complex (GO:0005875);; Biological Process: DNA replication (GO:0006260);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein complex assembly (GO:0006461);; Biological Process: meiotic cell cycle (GO:0007126);; Biological Process: pattern specification process (GO:0007389);; Molecular Function: cytoskeletal protein binding (GO:0008092);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Cellular Component: membrane (GO:0016020);; Biological Process: histone modification (GO:0016570);; Biological Process: actin cytoskeleton organization (GO:0030036);; Biological Process: cytokinetic process (GO:0032506);; Cellular Component: cell projection (GO:0042995);; Molecular Function: ion binding (GO:0043167);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: protein complex (GO:0043234);; Cellular Component: cytoskeletal part (GO:0044430);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: floral whorl development (GO:0048438);; Biological Process: floral organ formation (GO:0048449);; Biological Process: phyllome development (GO:0048827);; Biological Process: organelle assembly (GO:0070925);; ","--","--","[Z]","Cytoskeleton","Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-14T OS=Arabidopsis thaliana OX=3702 GN=KIN14T PE=3 SV=1","Z","Cytoskeleton","PREDICTED: carboxy-terminal kinesin 2-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: reproductive process (GO:0022414)"]
["Bra038798","Bra038798",3.111945,327,1.077072,114,0.913811,89,0.509558,38,0.47925,35,0.39257,29,0.0001214773842457,-2.22093994363683,"down","[C]","Energy production and conversion","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: apoplast (GO:0048046);; Molecular Function: reticuline oxidase activity (GO:0050468);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","FAD binding domain;; Berberine and berberine like","Berberine bridge enzyme-like 19 OS=Arabidopsis thaliana OX=3702 GN=At4g20830 PE=1 SV=2","C","Energy production and conversion","PREDICTED: reticuline oxidase-like protein [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell junction (GO:0030054);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488)"]
["Bra026294","Bra026294",145.670806,13762,141.609442,13314,162.065565,13951,88.456754,5881,89.775029,5676,85.815163,5447,{"v":5.15903441116256e-17,"d":"5.16E-17"},-1.32393683798235,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: transporter activity (GO:0005215);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: postreplication repair (GO:0006301);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: cellular ion homeostasis (GO:0006873);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: voltage-gated anion channel activity (GO:0008308);; Biological Process: response to humidity (GO:0009270);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: endosperm development (GO:0009960);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: response to iron ion (GO:0010039);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to ozone (GO:0010193);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: protein deubiquitination (GO:0016579);; Molecular Function: protein kinase binding (GO:0019901);; Cellular Component: UBC13-MMS2 complex (GO:0031372);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: multicellular organismal water homeostasis (GO:0050891);; Biological Process: regulation of transport (GO:0051049);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: stomatal closure (GO:0090332);; ","--","--","--","--","Voltage-dependent anion channel;; Ubiquitin-conjugating enzyme","S-type anion channel SLAH2 OS=Arabidopsis thaliana OX=3702 GN=SLAH2 PE=2 SV=1","P","Inorganic ion transport and metabolism","BnaC01g20530D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; biological process: multicellular organismal process (GO:0032501)"]
["Bra027083","Bra027083",0.690163,37,1.179658,67,0.831735,45,7.59494,290,13.771574,500,6.535607,238,{"v":7.68784354994173e-08,"d":"7.69E-08"},2.60680136037711,"up","--","--","Cellular Component: photosystem I (GO:0009522);; Cellular Component: photosystem II (GO:0009523);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: photosynthesis, light harvesting (GO:0009765);; Cellular Component: plastoglobule (GO:0010287);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: chlorophyll binding (GO:0016168);; Biological Process: protein-chromophore linkage (GO:0018298);; Biological Process: cysteine biosynthetic process (GO:0019344);; Cellular Component: light-harvesting complex (GO:0030076);; Molecular Function: metal ion binding (GO:0046872);; ","K08909|2.80571e-172|brp:103838443|K08909 light-harvesting complex I chlorophyll a/b binding protein 3 | (RefSeq) photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic","Photosynthesis - antenna proteins (ko00196)","--","--","Chlorophyll A-B binding protein","Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA3 PE=1 SV=1","S","Function unknown","PREDICTED: photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699)"]
["Bra001373","Bra001373",20.083595,5323,21.901226,5856,23.015616,5641,12.237829,2295,8.664271,1566,8.500423,1543,{"v":2.76989711836191e-11,"d":"2.77E-11"},-1.68453214525778,"down","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Molecular Function: protein phosphatase binding (GO:0019903);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","K13412|0|brp:103859356|K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 2-like","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; EF hand;; Protein tyrosine kinase;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain pair;; ABC transporter;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region","Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CPK2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: calcium-dependent protein kinase 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704)"]
["Bra016020","Bra016020",1.613748,166,2.03899,202,1.68493,185,4.259714,315,7.227887,517,6.062101,496,0.000913134065834693,1.17873825040328,"up","--","--","Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: proplastid stroma (GO:0009571);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; ","--","--","--","--","Domain of unknown function (DUF1995)","Protein LOW PSII ACCUMULATION 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1","S","Function unknown","PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra005312","Bra005312",59.407662,6763,144.760521,16474,154.790822,16226,24.094844,2119,11.987677,1060,11.663741,1020,{"v":1.95081747611989e-10,"d":"1.95E-10"},-3.1891961339459,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: mitochondrion (GO:0005739);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: glucuronosyltransferase activity (GO:0015020);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: xylan biosynthetic process (GO:0045492);; ","--","--","[G]","Carbohydrate transport and metabolism","Mannosyltransferase putative","Putative glucuronosyltransferase PGSIP8 OS=Arabidopsis thaliana OX=3702 GN=PGSIP8 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: putative glucuronosyltransferase PGSIP8 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra006795","Bra006795",2.591071,706,3.042472,807,2.957233,639,19.772451,3758,23.134363,4331,25.574939,4656,{"v":5.88981162702426e-35,"d":"5.89E-35"},2.49453332949664,"up","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Biological Process: para-aminobenzoic acid biosynthetic process (GO:0008153);; Molecular Function: 4-amino-4-deoxychorismate lyase activity (GO:0008696);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: tetrahydrofolate biosynthetic process (GO:0046654);; Molecular Function: D-alanine:2-oxoglutarate aminotransferase activity (GO:0047810);; ","K18482|0|brp:103856728|K18482 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] | (RefSeq) D-amino-acid transaminase, chloroplastic","Folate biosynthesis (ko00790)","[E]","Amino acid transport and metabolism","Amino-transferase class IV","D-amino-acid transaminase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DAAT PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: D-amino-acid transaminase, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra025713","Bra025713",528.418117,36584,638.077582,39467,621.023827,42568,255.910016,10968,142.972343,7570,157.030278,7806,{"v":1.67729699608267e-18,"d":"1.68E-18"},-2.21523890875599,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: flower development (GO:0009908);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; ","K13464|5.78025e-163|brp:103872713|K13464 jasmonate ZIM domain-containing protein | (RefSeq) protein TIFY 10A-like","Plant hormone signal transduction (ko04075)","--","--","tify domain;; Divergent CCT motif","Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1","S","Function unknown","BnaA06g13250D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra016103","Bra016103",0.815533,81,1.41642,142,1.394969,128,5.183008,363,5.206787,351,4.416081,299,0.000344731865291645,1.41076774628322,"up","[G]","Carbohydrate transport and metabolism","--","K15378|0|brp:103831701|K15378 solute carrier family 45, member 1/2/4 | (RefSeq) sucrose transport protein SUC1-like","--","[G]","Carbohydrate transport and metabolism","Major Facilitator Superfamily;; MFS/sugar transport protein","Sucrose transport protein SUC1 OS=Arabidopsis thaliana OX=3702 GN=SUC1 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: sucrose transport protein SUC1-like [Brassica rapa] ","--"]
["Bra000611","Bra000611",3.945987,299,9.997952,764,9.049416,634,2.569595,138,1.954674,101,2.040593,106,{"v":2.38076872504298e-06,"d":"2.38E-06"},-2.29695503509509,"down","[K]","Transcription","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: binding (GO:0005488);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: organelle organization (GO:0006996);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: transferase activity (GO:0016740);; Cellular Component: macromolecular complex (GO:0032991);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: nuclear part (GO:0044428);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: system development (GO:0048731);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: localization (GO:0051179);; ","--","--","[R]","General function prediction only","WD domain, G-beta repeat;; Nucleoporin Nup120/160;; PQQ-like domain","Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1","S","Function unknown","PREDICTED: F-box/WD repeat-containing protein 7 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179)"]
["Bra003919","Bra003919",21.969297,1025,33.026264,1586,42.519045,1896,9.465713,311,5.926756,198,6.648165,220,{"v":2.44887425510121e-11,"d":"2.45E-11"},-2.64645667164341,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: iron ion transport (GO:0006826);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: floral whorl development (GO:0048438);; Biological Process: plant ovule development (GO:0048481);; Biological Process: meristem development (GO:0048507);; Biological Process: lateral root development (GO:0048527);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: phyllome development (GO:0048827);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[K]","Transcription","SRF-type transcription factor (DNA-binding and dimerisation domain);; K-box region","Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=1 SV=2","K","Transcription","PREDICTED: agamous-like MADS-box protein AGL12 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007)"]
["Bra026964","Bra026964",48.716436,5078,62.344381,6562,56.451225,5504,29.838173,2216,24.966378,1814,24.203924,1746,{"v":8.82807409468503e-12,"d":"8.83E-12"},-1.61976044256588,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: calcium-dependent protein kinase C activity (GO:0004698);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana OX=3702 GN=CPK34 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: calcium-dependent protein kinase 26-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704)"]
["Bra024427","Bra024427",0.60292,56,0.184503,18,0.158207,14,2.718222,179,2.429816,154,2.406455,153,{"v":4.16044374013056e-05,"d":"4.16E-05"},2.34137076568431,"up","[OT]","Posttranslational modification, protein turnover, chaperones;; Signal transduction mechanisms","Cellular Component: nucleus (GO:0005634);; Biological Process: metabolic process (GO:0008152);; Molecular Function: amino acid binding (GO:0016597);; ","--","--","--","--","ACT domain;; ACT domain;; ACT domain","ACT domain-containing protein ACR1 OS=Arabidopsis thaliana OX=3702 GN=ACR1 PE=2 SV=1","S","Function unknown","PREDICTED: ACT domain-containing protein ACR1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)"]
["Bra019139","Bra019139",12.729886,658,18.487116,956,18.127917,860,10.145985,378,11.897683,415,10.627425,368,0.00016246609972776,-1.1467615666069,"down","[GR]","Carbohydrate transport and metabolism;; General function prediction only","--","K17623|0|bna:106440864|K17623 pseudouridine 5'-phosphatase [EC:3.1.3.96] | (RefSeq) (DL)-glycerol-3-phosphatase 2-like","--","[R]","General function prediction only","Haloacid dehalogenase-like hydrolase;; haloacid dehalogenase-like hydrolase","(DL)-glycerol-3-phosphatase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GPP1 PE=1 SV=1","S","Function unknown","(DL)-glycerol-3-phosphatase 2-like [Brassica napus]","--"]
["Bra009036","Bra009036",28.97414,1985,52.407837,3622,51.467415,3261,27.148518,1316,18.3493,856,18.422974,865,{"v":4.59790188221009e-05,"d":"4.60E-05"},-1.59272998441414,"down","--","--","Molecular Function: phospholipid binding (GO:0005543);; ","--","--","[TU]","Signal transduction mechanisms;; Intracellular trafficking, secretion, and vesicular transport","ANTH domain","Putative clathrin assembly protein At5g10410 OS=Arabidopsis thaliana OX=3702 GN=At5g10410 PE=2 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: putative clathrin assembly protein At5g10410 [Brassica rapa]","molecular function: binding (GO:0005488)"]
["Bra034078","Bra034078",6.88615,697,2.396773,248,2.997343,281,13.110479,941,20.949972,1447,18.65917,1293,0.000419583840545901,1.54249034025589,"up","[T]","Signal transduction mechanisms","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein glycosylation (GO:0006486);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","--","--","alpha/beta hydrolase fold;; Alpha/beta hydrolase family;; Serine aminopeptidase, S33","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103848020 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra021698","Bra021698",156.615585,2310,176.259842,2623,188.461304,2571,116.238251,1213,107.77256,1083,104.16111,1053,{"v":7.29029224461458e-09,"d":"7.29E-09"},-1.2200716841096,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","uncharacterized protein CFP56_08467 [Quercus suber]","--"]
["Bra034838","Bra034838",40.378389,3807,101.883722,9529,118.822557,10286,30.683163,2110,11.532491,798,11.94081,809,{"v":4.83452468142214e-06,"d":"4.83E-06"},-2.6214665947238,"down","[I]","Lipid transport and metabolism","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: defense response (GO:0006952);; Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: xylem development (GO:0010089);; Cellular Component: membrane (GO:0016020);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: methylation (GO:0032259);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: single-organism process (GO:0044699);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: 2-phytyl-1,4-naphthoquinone methyltransferase activity (GO:0052624);; Molecular Function: S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity (GO:0080150);; ","--","--","--","--","SAM dependent carboxyl methyltransferase","Salicylate/benzoate carboxyl methyltransferase OS=Arabidopsis thaliana OX=3702 GN=BSMT1 PE=1 SV=1","S","Function unknown","PREDICTED: salicylate/benzoate carboxyl methyltransferase-like isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020)"]
["Bra021879","Bra021879",2.641357,156,3.090598,184,1.857419,102,10.490237,437,12.858039,515,11.788207,475,{"v":5.80989985092232e-08,"d":"5.81E-08"},1.62463947912279,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: translation (GO:0006412);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: small ribosomal subunit (GO:0015935);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: response to cadmium ion (GO:0046686);; ","K02988|3.38275e-120|brp:103865299|K02988 small subunit ribosomal protein S5 | (RefSeq) 30S ribosomal protein S5, chloroplastic","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein S5, C-terminal domain;; Ribosomal protein S5, N-terminal domain","30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: 30S ribosomal protein S5, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra003066","Bra003066",465.054428,15513,392.468384,13304,409.780029,12179,1036.966217,23984,1402.18042,31749,1333.454559,29918,{"v":3.03592460274249e-08,"d":"3.04E-08"},1.01490049705701,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: postreplication repair (GO:0006301);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: phosphatidylinositol biosynthetic process (GO:0006661);; Biological Process: membrane fusion (GO:0006944);; Biological Process: UV protection (GO:0009650);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: endosperm development (GO:0009960);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to iron ion (GO:0010039);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: endosomal transport (GO:0016197);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: protein deubiquitination (GO:0016579);; Cellular Component: UBC13-MMS2 complex (GO:0031372);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: histone H2B ubiquitination (GO:0033523);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: regulation of transport (GO:0051049);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to misfolded protein (GO:0051788);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin-conjugating enzyme","Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","ubiquitin-conjugating enzyme E2 10 [Eutrema salsugineum] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991)"]
["Bra033022","Bra033022",0,0,0.051968,3,0.087215,5,1.338409,48,3.742738,129,3.652739,126,{"v":4.9688137761923e-07,"d":"4.97E-07"},4.33075539357498,"up","--","--","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: rRNA processing (GO:0006364);; Cellular Component: photosystem I (GO:0009522);; Cellular Component: photosystem II (GO:0009523);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to sucrose (GO:0009744);; Biological Process: photosynthesis, light harvesting (GO:0009765);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; Cellular Component: plastoglobule (GO:0010287);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: chlorophyll binding (GO:0016168);; Biological Process: protein-chromophore linkage (GO:0018298);; Cellular Component: light-harvesting complex (GO:0030076);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: metal ion binding (GO:0046872);; ","K08913|2.32862e-172|brp:103837002|K08913 light-harvesting complex II chlorophyll a/b binding protein 2 | (RefSeq) chlorophyll a-b binding protein 36, chloroplastic","Photosynthesis - antenna proteins (ko00196)","--","--","Chlorophyll A-B binding protein","Chlorophyll a-b binding protein 2.4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.4 PE=1 SV=1","--","--","PREDICTED: chlorophyll a-b binding protein 36, chloroplastic [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699)"]
["Bra019028","Bra019028",0.250305,33,0.240544,32,0.24633,30,1.947431,178,2.157543,189,2.404796,212,{"v":2.64851177595312e-15,"d":"2.65E-15"},2.51231547879162,"up","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: xylem development (GO:0010089);; Molecular Function: protochlorophyllide reductase activity (GO:0016630);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","short chain dehydrogenase;; Enoyl-(Acyl carrier protein) reductase;; KR domain","Dehydrogenase/reductase SDR family member FEY OS=Arabidopsis thaliana OX=3702 GN=FEY PE=1 SV=1","S","Function unknown","PREDICTED: retinol dehydrogenase 12-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987)"]
["Bra020430","Bra020430",43.099551,5322,17.824699,2351,12.483286,1384,16.710222,1556,11.236742,978,9.569365,846,0.00679941457439992,-1.35122080385982,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein N-linked glycosylation (GO:0006487);; ","--","--","--","--","Calmodulin binding protein-like","Calmodulin-binding protein 60 B OS=Arabidopsis thaliana OX=3702 GN=CBP60B PE=2 SV=1","--","--","PREDICTED: calmodulin-binding protein 60 B-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra022287","Bra022287",3.274228,219,1.863896,127,1.962078,123,0.277746,13,0.432026,20,0.66152,30,{"v":9.87110508804898e-09,"d":"9.87E-09"},-2.79186545063795,"down","--","--","Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular metabolic process (GO:0044237);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","--","--","B3 DNA binding domain","B3 domain-containing protein REM9 OS=Arabidopsis thaliana OX=3702 GN=REM9 PE=2 SV=1","K","Transcription","PREDICTED: B3 domain-containing protein REM7-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)"]
["Bra031847","Bra031847",57.601827,4209,106.381168,7852,111.194235,7513,39.696832,2060,19.042847,957,19.411969,975,{"v":6.19975802815016e-07,"d":"6.20E-07"},-2.30088298825858,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: response to other organism (GO:0051707);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103855314|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor RAX3-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor RAX3-like [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra002625","Bra002625",71.453075,8764,150.52812,18649,156.071568,17689,16.831861,1481,6.576705,548,6.58288,568,{"v":1.41425133503503e-14,"d":"1.41E-14"},-4.01093526067369,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: phosphatidylinositol phospholipase C activity (GO:0004435);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to salt stress (GO:0009651);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: D-xylose metabolic process (GO:0042732);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: Golgi localization (GO:0051645);; Biological Process: mitochondrion localization (GO:0051646);; Biological Process: calcium ion homeostasis (GO:0055074);; Biological Process: peroxisome localization (GO:0060151);; ","K05857|0|brp:103845302|K05857 phosphatidylinositol phospholipase C, delta [EC:3.1.4.11] | (RefSeq) phosphoinositide phospholipase C 4","Inositol phosphate metabolism (ko00562);; Phosphatidylinositol signaling system (ko04070);; AGE-RAGE signaling pathway in diabetic complications (ko04933)","[T]","Signal transduction mechanisms","Phosphatidylinositol-specific phospholipase C, X domain;; Phosphatidylinositol-specific phospholipase C, Y domain;; C2 domain","Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana OX=3702 GN=PLC4 PE=2 SV=2","S","Function unknown","PREDICTED: phosphoinositide phospholipase C 4 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra032214","Bra032214",31.706855,4807,21.877312,3479,24.097909,3416,10.966759,1234,5.709029,614,6.603065,703,{"v":7.88186365890972e-12,"d":"7.88E-12"},-2.19962452862154,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plastid (GO:0009536);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: multi-organism process (GO:0051704);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana OX=3702 GN=At1g47380 PE=2 SV=1","T","Signal transduction mechanisms","BnaA05g18570D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra023669","Bra023669",22.65155,1637,37.764268,2775,38.544481,2615,27.186046,1419,10.821537,544,13.051451,666,0.00318243044834933,-1.45033152257211,"down","--","--","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: organ boundary specification between lateral organs and the meristem (GO:0010199);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: heat acclimation (GO:0010286);; Biological Process: positive regulation of cell fate commitment (GO:0010455);; Cellular Component: Cajal body (GO:0015030);; Biological Process: cellular response to stress (GO:0033554);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: carpel development (GO:0048440);; Biological Process: regulation of timing of animal organ formation (GO:0048504);; Biological Process: lateral root development (GO:0048527);; Biological Process: root cap development (GO:0048829);; Biological Process: negative regulation of cell division (GO:0051782);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 87 OS=Arabidopsis thaliana OX=3702 GN=NAC087 PE=2 SV=1","S","Function unknown","PREDICTED: NAC domain-containing protein 92-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422)"]
["Bra035885","Bra035885",28.149573,4056,14.170387,2053,14.062285,1851,2.165421,232,3.956293,429,2.799202,302,{"v":1.27856607060953e-15,"d":"1.28E-15"},-2.97616869758906,"down","[E]","Amino acid transport and metabolism","Cellular Component: plant-type vacuole (GO:0000325);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: iron ion transport (GO:0006826);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Molecular Function: oligopeptide transporter activity (GO:0015198);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: organic substance metabolic process (GO:0071704);; Molecular Function: low-affinity nitrate transmembrane transporter activity (GO:0080054);; Biological Process: low-affinity nitrate transport (GO:0080055);; Biological Process: response to karrikin (GO:0080167);; Biological Process: phloem nitrate loading (GO:0090408);; Molecular Function: glucosinolate:proton symporter activity (GO:0090448);; Biological Process: phloem glucosinolate loading (GO:0090449);; Biological Process: glucosinolate transport (GO:1901349);; ","--","--","[E]","Amino acid transport and metabolism","POT family","Protein NRT1/ PTR FAMILY 2.11 OS=Arabidopsis thaliana OX=3702 GN=NPF2.11 PE=1 SV=1","E","Amino acid transport and metabolism","BnaA09g06190D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: transporter activity (GO:0005215);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501)"]
["Bra011329","Bra011329",1.276682,55,0.878135,39,0.669892,27,3.016092,92,6.363883,187,5.210999,154,0.000340225836430431,1.74828880203766,"up","[C]","Energy production and conversion","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: nucleotide binding (GO:0000166);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: plastid organization (GO:0009657);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: photorespiration (GO:0009853);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chitin (GO:0010200);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: hydrogen ion transmembrane transporter activity (GO:0015078);; Biological Process: ATP synthesis coupled proton transport (GO:0015986);; Biological Process: proton transport (GO:0015992);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Molecular Function: ion binding (GO:0043167);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: innate immune response (GO:0045087);; Cellular Component: proton-transporting ATP synthase complex (GO:0045259);; Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to other organism (GO:0051707);; Cellular Component: plastid thylakoid membrane (GO:0055035);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K02109|4.39672e-82|brp:103851204|K02109 F-type H+-transporting ATPase subunit b | (RefSeq) ATP synthase subunit b', chloroplastic","Oxidative phosphorylation (ko00190);; Photosynthesis (ko00195)","--","--","ATP synthase B/B' CF(0)","ATP synthase subunit b&apos;, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPG PE=1 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: ATP synthase subunit b&apos;, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; cellular component: macromolecular complex (GO:0032991)"]
["Bra030965","Bra030965",1.439266,214,1.089722,142,1.640742,220,5.186338,487,6.3418,650,6.124077,620,{"v":1.28246919646608e-06,"d":"1.28E-06"},1.52932106939052,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: postreplication repair (GO:0006301);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: protein targeting (GO:0006605);; Biological Process: phosphate ion transport (GO:0006817);; Biological Process: organelle organization (GO:0006996);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: acid-amino acid ligase activity (GO:0016881);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: phosphate ion homeostasis (GO:0055062);; ","K10581|0|brp:103832701|K10581 ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24] | (RefSeq) putative ubiquitin-conjugating enzyme E2 38","Ubiquitin mediated proteolysis (ko04120)","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin-conjugating enzyme","Probable ubiquitin-conjugating enzyme E2 26 OS=Arabidopsis thaliana OX=3702 GN=UBC26 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: putative ubiquitin-conjugating enzyme E2 38 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414)"]
["Bra015788","Bra015788",0.384589,9,0,0,0.171185,4,4.385198,71,13.651893,212,11.489485,179,{"v":1.44470588844329e-07,"d":"1.44E-07"},4.41632891619261,"up","[C]","Energy production and conversion","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: copper ion binding (GO:0005507);; Biological Process: pentose-phosphate shunt (GO:0006098);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to sucrose (GO:0009744);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: negative regulation of translation (GO:0017148);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: electron transport chain (GO:0022900);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to copper ion (GO:0046688);; Biological Process: root hair elongation (GO:0048767);; Biological Process: copper ion homeostasis (GO:0055070);; Biological Process: divalent metal ion transport (GO:0070838);; Biological Process: cell wall organization (GO:0071555);; ","K02638|4.60467e-67|bna:106421661|K02638 plastocyanin | (RefSeq) plastocyanin-like","Photosynthesis (ko00195)","--","--","Copper binding proteins, plastocyanin/azurin family;; Cupredoxin-like domain","Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PETE PE=1 SV=2","C","Energy production and conversion","plastocyanin [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra029317","Bra029317",1.259415,210,6.052296,1015,5.256413,808,0.603782,71,0.27952,32,0.363731,42,{"v":3.57894669488644e-08,"d":"3.58E-08"},-3.61537114220785,"down","[T]","Signal transduction mechanisms","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: response to molecule of fungal origin (GO:0002238);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to hormone (GO:0009725);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular component organization (GO:0016043);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; U-box domain","U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: U-box domain-containing protein 52 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra014273","Bra014273",0.683322,67,0.530999,50,0.52561,51,1.658786,115,2.096557,131,3.873388,247,0.00230083943343337,1.4581238837261,"up","[J]","Translation, ribosomal structure and biogenesis","--","K21027|0|brp:103832852|K21027 tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] | (RefSeq) tRNA-specific 2-thiouridylase MnmA","Sulfur relay system (ko04122)","[J]","Translation, ribosomal structure and biogenesis","tRNA methyl transferase;; Asparagine synthase","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103832852 [Brassica rapa]","--"]
["Bra040550","Bra040550",1.206302,141,0.996652,118,1.19212,129,0.383168,32,0.31399,25,0.101481,9,{"v":8.68063180775432e-06,"d":"8.68E-06"},-2.46997045745348,"down","[T]","Signal transduction mechanisms","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: tissue development (GO:0009888);; Biological Process: response to organonitrogen compound (GO:0010243);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: phosphorylation (GO:0016310);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: innate immune response (GO:0045087);; Biological Process: animal organ development (GO:0048513);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to nitrogen compound (GO:1901699);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Protein LYK2 OS=Arabidopsis thaliana OX=3702 GN=LYK2 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: protein LYK2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376)"]
["Bra012684","Bra012684",6.838232,408,23.289612,1366,19.933306,1074,1.216661,51,0.935537,39,0.186227,8,{"v":1.02211062097859e-10,"d":"1.02E-10"},-4.5070799585712,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Cellular Component: membrane (GO:0016020);; Biological Process: sexual reproduction (GO:0019953);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-like B1 OS=Arabidopsis thaliana OX=3702 GN=EXLB1 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: expansin-like B1 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra027411","Bra027411",12.84078,1191,27.710464,2594,27.08938,2324,9.151609,601,8.159478,516,8.060863,513,{"v":2.34140311157395e-06,"d":"2.34E-06"},-1.94164188300534,"down","[E]","Amino acid transport and metabolism","Biological Process: amino acid transmembrane transport (GO:0003333);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: polyamine transmembrane transporter activity (GO:0015203);; Molecular Function: basic amino acid transmembrane transporter activity (GO:0015326);; Biological Process: chlorophyll catabolic process (GO:0015996);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: cellular response to stress (GO:0033554);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: sphingoid biosynthetic process (GO:0046520);; Biological Process: polyamine transmembrane transport (GO:1902047);; ","--","--","[E]","Amino acid transport and metabolism","Amino acid permease;; Amino acid permease","Probable polyamine transporter At3g13620 OS=Arabidopsis thaliana OX=3702 GN=At3g13620 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: probable polyamine transporter At3g13620 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; biological process: metabolic process (GO:0008152);; cellular component: membrane part (GO:0044425);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226)"]
["Bra039122","Bra039122",24.245118,10595,36.52853,16231,39.059476,15826,19.303043,5807,21.445382,6416,22.94104,6787,{"v":8.95766673887961e-05,"d":"8.96E-05"},-1.2250670450525,"down","[R]","General function prediction only","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: GPI anchor biosynthetic process (GO:0006506);; Molecular Function: sulfuric ester hydrolase activity (GO:0008484);; Molecular Function: transferase activity (GO:0016740);; ","K05285|0|brp:103870975|K05285 phosphatidylinositol glycan, class N [EC:2.7.-.-] | (RefSeq) GPI ethanolamine phosphate transferase 1","Glycosylphosphatidylinositol(GPI)-anchor biosynthesis (ko00563)","[T]","Signal transduction mechanisms","Phosphatidylinositolglycan class N (PIG-N);; Type I phosphodiesterase / nucleotide pyrophosphatase;; Sulfatase","--","S","Function unknown","PREDICTED: GPI ethanolamine phosphate transferase 1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra035195","Bra035195",1.928335,281,3.66395,538,3.342618,450,1.145749,118,0.737406,73,0.528132,53,{"v":1.25625766868138e-06,"d":"1.26E-06"},-2.3648265986718,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: cellular process (GO:0009987);; ","--","--","--","--","LURP-one-related","Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=1","--","--","PREDICTED: protein LURP-one-related 5-like [Brassica oleracea var. oleracea] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)"]
["Bra030273","Bra030273",7.829624,338,20.72128,814,25.564668,999,1.959558,58,0.549459,16,0.049591,2,{"v":1.24047389630731e-06,"d":"1.24E-06"},-4.2031351921461,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plastid (GO:0009536);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Biological Process: membrane organization (GO:0016044);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: innate immune response (GO:0045087);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; Biological Process: cellular heat acclimation (GO:0070370);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 59 OS=Arabidopsis thaliana OX=3702 GN=WRKY59 PE=2 SV=2","K","Transcription","probable WRKY transcription factor 59 [Brassica rapa] ","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179)"]
["Bra032465","Bra032465",1.148558,94,0.803821,68,0.76183,60,4.580006,273,3.76937,213,4.155593,237,{"v":4.41693959754388e-09,"d":"4.42E-09"},1.64455217604195,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","[I]","Lipid transport and metabolism","CRAL/TRIO domain","Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana OX=3702 GN=SFH3 PE=2 SV=1","S","Function unknown","PREDICTED: SEC14 cytosolic factor-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra037732","Bra037732",1.727132,217,3.355727,398,2.973763,370,1.755249,135,0.677956,93,0.970398,139,0.00106124840918429,-1.46198056614136,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: positive regulation of flower development (GO:0009911);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: phyllome development (GO:0048827);; Biological Process: root hair cell development (GO:0080147);; Biological Process: positive regulation of brassinosteroid biosynthetic process (GO:2000488);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH129 OS=Arabidopsis thaliana OX=3702 GN=BHLH129 PE=3 SV=2","K","Transcription","PREDICTED: transcription factor bHLH129-like isoform X1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)"]
["Bra007864","Bra007864",0.116154,7,0.098216,9,0.18696,15,1.373581,78,10.903103,414,11.421919,445,{"v":4.23194295809784e-09,"d":"4.23E-09"},4.32755167634936,"up","--","--","Molecular Function: structural constituent of cell wall (GO:0005199);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: syncytium formation (GO:0006949);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Biological Process: plant-type cell wall modification involved in multidimensional cell growth (GO:0009831);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of stomatal movement (GO:0010119);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: expansin-A1 [Brassica rapa]","molecular function: structural molecule activity (GO:0005198);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020)"]
["Bra032901","Bra032901",13.349537,423,6.722236,215,6.797404,199,4.301074,97,1.944908,42,2.081018,46,{"v":2.34003145907374e-05,"d":"2.34E-05"},-2.10183275422281,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: amino acid transport (GO:0006865);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to glucose (GO:0009749);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: embryonic pattern specification (GO:0009880);; Biological Process: specification of animal organ axis polarity (GO:0010084);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: response to chitin (GO:0010200);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: membrane (GO:0016020);; Cellular Component: nuclear body (GO:0016604);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to anoxia (GO:0034059);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: cotyledon development (GO:0048825);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: cellular response to freezing (GO:0071497);; ","K09286|7.63824e-103|brp:103838958|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor 11-like","--","--","--","AP2 domain","Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor 11-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: membrane-enclosed lumen (GO:0031974);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra036172","Bra036172",21.427406,1680,48.412949,3830,54.9781,3987,23.671515,1313,9.398713,502,8.079284,434,0.00041025340444811,-2.06125891193934,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Cellular Component: extracellular region (GO:0005576);; Biological Process: proteolysis (GO:0006508);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: amino acid transport (GO:0006865);; Biological Process: defense response (GO:0006952);; Biological Process: response to organic substance (GO:0010033);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor C-terminal;; Xylanase inhibitor N-terminal","Basic 7S globulin 2 OS=Glycine max OX=3847 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: basic 7S globulin 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra000738","Bra000738",3.208437,762,9.078861,2139,9.391111,1992,4.822998,823,2.308184,391,2.537418,446,0.00448999947589917,-1.58391742951252,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: translation initiation factor activity (GO:0003743);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: translation (GO:0006412);; Biological Process: translational initiation (GO:0006413);; Biological Process: defense response (GO:0006952);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: tissue development (GO:0009888);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: positive regulation of organelle organization (GO:0010638);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: regulation of chromosome organization (GO:0033044);; Molecular Function: guiding stereospecific synthesis activity (GO:0042349);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Biological Process: regulation of catalytic activity (GO:0050790);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: (-)-pinoresinol biosynthetic process (GO:1901599);; ","K02519|0|brp:103858595|K02519 translation initiation factor IF-2 | (RefSeq) translation initiation factor IF-2-like","--","[J]","Translation, ribosomal structure and biogenesis","Elongation factor Tu GTP binding domain;; Translation-initiation factor 2;; Dirigent-like protein;; 50S ribosome-binding GTPase;; Ferrous iron transport protein B;; Ethanolamine utilisation - propanediol utilisation","Translation initiation factor IF-2, chloroplastic (Fragment) OS=Euglena gracilis OX=3039 GN=INFB PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103858595 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; molecular function: enzyme regulator activity (GO:0030234)"]
["Bra012480","Bra012480",25.932702,3366,49.610265,6342,55.577324,6438,12.284835,1215,6.78661,650,3.818883,477,{"v":8.40465551655176e-09,"d":"8.40E-09"},-2.76625810693047,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: amino acid transport (GO:0006865);; Biological Process: defense response (GO:0006952);; Biological Process: oligosaccharide metabolic process (GO:0009311);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: cellular water homeostasis (GO:0009992);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: lateral root development (GO:0048527);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; Biological Process: carbohydrate derivative biosynthetic process (GO:1901137);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Wall-associated receptor kinase galacturonan-binding","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra016152","Bra016152",1.065605,162,0.284701,46,0.530694,77,3.15734,339,3.851751,403,3.347228,362,{"v":9.06406698172568e-05,"d":"9.06E-05"},1.87545466089436,"up","--","--","--","--","--","[K]","Transcription","SWIB/MDM2 domain;; Plus-3 domain","Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2","B","Chromatin structure and dynamics","PREDICTED: uncharacterized protein At5g08430-like [Brassica rapa]","--"]
["Bra033017","Bra033017",0.610425,77,0.516105,61,0.348671,41,3.352891,282,3.309654,256,3.981557,320,{"v":7.58993791538002e-13,"d":"7.59E-13"},2.19446354866475,"up","--","--","Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: gene expression (GO:0010467);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[L]","Replication, recombination and repair","CRS1 / YhbY (CRM) domain","Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra022955","Bra022955",3.443202,213,4.536223,352,4.006604,79,8.226152,320,39.916494,2099,19.026102,982,0.00402968063497035,2.14805813495514,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; ","--","--","--","--","Dormancy/auxin associated protein","Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DRMH1 PE=1 SV=1","S","Function unknown","PREDICTED: dormancy-associated protein homolog 1 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra005709","Bra005709",3.089664,69,0.785201,19,0.734755,16,6.593587,103,21.941448,332,18.463216,277,0.00027754546833785,2.56353434064091,"up","--","--","Biological Process: circadian rhythm (GO:0007623);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; ","--","--","--","--","--","Light-harvesting complex-like protein OHP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP1 PE=1 SV=1","S","Function unknown","PREDICTED: high-light-induced protein, chloroplastic [Brassica rapa]","biological process: rhythmic process (GO:0048511);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987)"]
["Bra007964","Bra007964",2.198946,222,2.036335,207,2.63305,240,5.64276,389,12.003301,807,11.911798,790,0.000261680384193064,1.47302017119935,"up","[V]","Defense mechanisms","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Biological Process: cadmium ion transport (GO:0015691);; Biological Process: transcription factor import into nucleus (GO:0042991);; Biological Process: sequestering of metal ion (GO:0051238);; ","K03327|0|brp:103852705|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 14-like","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 14 OS=Arabidopsis thaliana OX=3702 GN=DTX14 PE=1 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 14-like isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007)"]
["Bra030746","Bra030746",2.146047,356,1.066314,181,1.328911,207,4.396726,510,6.745874,770,6.02667,691,{"v":6.83054797942503e-05,"d":"6.83E-05"},1.3595085121208,"up","--","--","Biological Process: cellular process (GO:0009987);; Biological Process: single-organism process (GO:0044699);; Biological Process: regulation of biological process (GO:0050789);; ","K04706|0|bna:106362331|K04706 E3 SUMO-protein ligase PIAS1 | (RefSeq) uncharacterized LOC106362331","Ubiquitin mediated proteolysis (ko04120)","[K]","Transcription","MIZ/SP-RING zinc finger;; Zinc-finger of the MIZ type in Nse subunit","E4 SUMO-protein ligase PIAL1 OS=Arabidopsis thaliana OX=3702 GN=PIAL1 PE=2 SV=1","S","Function unknown","E4 SUMO-protein ligase PIAL1-like [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra040556","Bra040556",1.219833,189,1.771042,276,1.883729,270,0.357167,40,0.210481,23,0.157319,17,{"v":1.09174256910011e-10,"d":"1.09E-10"},-3.14191339822058,"down","--","--","Biological Process: cellular process (GO:0009987);; ","--","--","[R]","General function prediction only","zinc-binding in reverse transcriptase;; Reverse transcriptase-like","Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1","S","Function unknown","BnaA07g00610D [Brassica napus]","biological process: cellular process (GO:0009987)"]
["Bra009292","Bra009292",8.885595,766,10.177267,967,10.389413,918,7.740242,484,5.127965,305,6.451607,393,{"v":9.05158341917266e-05,"d":"9.05E-05"},-1.21712674290646,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: response to nitrate (GO:0010167);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: O-acetyltransferase activity (GO:0016413);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: xylan biosynthetic process (GO:0045492);; Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734);; Molecular Function: spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080072);; Molecular Function: sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080089);; ","--","--","--","--","Transferase family","Spermidine sinapoyl-CoA acyltransferase OS=Arabidopsis thaliana OX=3702 GN=SDT PE=1 SV=1","S","Function unknown","PREDICTED: spermidine sinapoyl-CoA acyltransferase [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824)"]
["Bra010190","Bra010190",22.144125,546,36.533363,909,28.62365,653,15.92046,278,10.211591,172,8.727489,148,{"v":5.74826386961316e-06,"d":"5.75E-06"},-1.83965601382624,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: iron ion transport (GO:0006826);; Biological Process: autophagy (GO:0006914);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: membrane (GO:0016020);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: pigment biosynthetic process (GO:0046148);; Molecular Function: coniferyl-alcohol glucosyltransferase activity (GO:0047209);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: biological regulation (GO:0065007);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: quercetin 3'-O-glucosyltransferase activity (GO:0080045);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 91C1 OS=Arabidopsis thaliana OX=3702 GN=UGT91C1 PE=2 SV=1","S","Function unknown","BnaCnng53280D [Brassica napus]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra023988","Bra023988",0.939599,73,0.320021,41,0.514221,49,1.634327,109,1.981954,122,1.958101,144,0.00312058882334793,1.14247556321626,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Cellular Component: chloroplast envelope (GO:0009941);; ","--","--","--","--","B3 DNA binding domain","B3 domain-containing protein REM8 OS=Arabidopsis thaliana OX=3702 GN=REM8 PE=2 SV=1","K","Transcription","PREDICTED: B3 domain-containing protein REM7 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: organelle part (GO:0044422)"]
["Bra006663","Bra006663",1.072057,88,2.151536,178,2.030121,154,0,0,0,0,0,0,{"v":1.69790704151376e-14,"d":"1.70E-14"},-7.23865053505637,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: cysteine-type endopeptidase activity (GO:0004197);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: glycolytic process (GO:0006096);; Biological Process: proteolysis (GO:0006508);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: aging (GO:0007568);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to fructose (GO:0009750);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: response to cadmium ion (GO:0046686);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Papain family cysteine protease;; Cathepsin propeptide inhibitor domain (I29)","Thiol protease aleurain OS=Arabidopsis thaliana OX=3702 GN=ALEU PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","thiol protease aleurain-like [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502)"]
["Bra029204","Bra029204",3.446887,299,8.76553,766,8.275808,663,1.634524,101,2.084262,123,1.420022,85,{"v":6.4934519281373e-07,"d":"6.49E-07"},-2.46839359366192,"down","--","--","Molecular Function: binding (GO:0005488);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of double fertilization forming a zygote and endosperm (GO:0080155);; ","K11968|0|brp:103855063|K11968 ariadne-1 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase ARI14","--","[O]","Posttranslational modification, protein turnover, chaperones","IBR domain, a half RING-finger domain","Probable E3 ubiquitin-protein ligase ARI14 OS=Arabidopsis thaliana OX=3702 GN=ARI14 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin-protein ligase ARI14 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra000892","Bra000892",7.80089,564,19.271179,1411,20.899408,1413,0.973212,49,0,0,0.629327,36,{"v":3.36827950633789e-06,"d":"3.37E-06"},-4.40107131094269,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: chitin catabolic process (GO:0006032);; Molecular Function: endochitinase activity (GO:0008843);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Molecular Function: exochitinase activity (GO:0035885);; ","K01183|0|brp:103858776|K01183 chitinase [EC:3.2.1.14] | (RefSeq) chitotriosidase-1-like","Amino sugar and nucleotide sugar metabolism (ko00520)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolases family 18","Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: chitotriosidase-1-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Brassica_rapa_newGene_197","--",2.499172,176,2.133727,151,2.162615,141,1.354284,68,0.724892,35,0.473052,23,0.000293088311245866,-1.85853164128298,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra030670","Bra030670",8.593562,504,9.495221,556,11.920071,637,8.93245,366,4.57381,184,6.162187,272,0.004290696114499,-1.09433473232888,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Biological Process: metabolic process (GO:0008152);; ","K08059|1.75293e-164|brp:103836457|K08059 interferon, gamma-inducible protein 30 | (RefSeq) gamma-interferon-inducible lysosomal thiol reductase-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Gamma interferon inducible lysosomal thiol reductase (GILT)","--","S","Function unknown","PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152)"]
["Bra012409","Bra012409",24.668966,513,15.853263,333,27.5553,530,5.22107,77,6.17892,88,5.801172,83,{"v":1.61844659004108e-14,"d":"1.62E-14"},-2.48060493542183,"down","--","--","Molecular Function: glutathione transferase activity (GO:0004364);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: aging (GO:0007568);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; ","K00799|7.94078e-70|brp:103829825|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase U13-like","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","--","Glutathione S-transferase U13 OS=Arabidopsis thaliana OX=3702 GN=GSTU13 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase U13-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra037213","Bra037213",0.609855,227,1.54745,424,1.835446,402,0.665196,141,0.322534,82,0.658858,150,0.00153596964637244,-1.52618371317051,"down","--","--","Cellular Component: 1,3-beta-D-glucan synthase complex (GO:0000148);; Molecular Function: 1,3-beta-D-glucan synthase activity (GO:0003843);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: (1->3)-beta-D-glucan biosynthetic process (GO:0006075);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: circadian rhythm (GO:0007623);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen germination (GO:0009846);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: defense response signaling pathway, resistance gene-dependent (GO:0009870);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: leaf senescence (GO:0010150);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: pollen exine formation (GO:0010584);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","K11000|0|brp:103837634|K11000 callose synthase [EC:2.4.1.-] | (RefSeq) callose synthase 5","--","[M]","Cell wall/membrane/envelope biogenesis","1,3-beta-glucan synthase component;; 1,3-beta-glucan synthase subunit FKS1, domain-1;; Vta1 like","Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1","S","Function unknown","PREDICTED: callose synthase 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: rhythmic process (GO:0048511);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra014626","Bra014626",0.904494,25,0.711097,20,0.705855,18,3.093705,61,3.063925,58,4.31926,82,0.000781459829083519,1.57412331681932,"up","--","--","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: positive regulation of seed germination (GO:0010030);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: monosaccharide transport (GO:0015749);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: glucose homeostasis (GO:0042593);; ","K08145|7.00817e-42|brp:103829488|K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8 | (RefSeq) sugar transporter ERD6-like 7","--","[R]","General function prediction only","--","Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana OX=3702 GN=At2g48020 PE=2 SV=2","S","Function unknown","ORFc, partial [Arabidopsis thaliana]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra029808","Bra029808",4.223293,59,9.196514,130,10.102701,131,0.147004,2,1.011446,10,0.817435,8,{"v":6.58891991715168e-07,"d":"6.59E-07"},-3.66555373763133,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103870501 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra006650","Bra006650",15.174959,843,17.582705,985,18.091778,929,2.966843,117,2.789124,106,1.997457,76,{"v":1.10404358960484e-29,"d":"1.10E-29"},-3.2223697730614,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: water channel activity (GO:0015250);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root hair elongation (GO:0048767);; Biological Process: hydrogen peroxide transmembrane transport (GO:0080170);; ","K09872|0|brp:103856549|K09872 aquaporin PIP | (RefSeq) probable aquaporin PIP2-4","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Probable aquaporin PIP2-4 OS=Arabidopsis thaliana OX=3702 GN=PIP2-4 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable aquaporin PIP2-4 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra039219","Bra039219",75.95323,5474,246.705459,17906,247.915669,16501,16.959165,862,6.544419,320,5.254061,259,{"v":9.20066685063325e-14,"d":"9.20E-14"},-4.56336370561438,"down","[F]","Nucleotide transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytosol (GO:0005829);; Biological Process: glutamine metabolic process (GO:0006541);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: coumarin biosynthetic process (GO:0009805);; Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity (GO:0009815);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: response to nitrate (GO:0010167);; Biological Process: hydrogen peroxide-mediated programmed cell death (GO:0010421);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Biological Process: chlorophyll catabolic process (GO:0015996);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Biological Process: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine (GO:0019281);; Biological Process: glucosinolate metabolic process (GO:0019760);; Molecular Function: gamma-glutamyl-peptidase activity (GO:0034722);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: ion binding (GO:0043167);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[F]","Nucleotide transport and metabolism","non-haem dioxygenase in morphine synthesis N-terminal;; Glutamine amidotransferase class-I;; Homoserine O-succinyltransferase","Gamma-glutamyl peptidase 4 OS=Arabidopsis thaliana OX=3702 GN=GGP4 PE=3 SV=1","F","Nucleotide transport and metabolism","PREDICTED: gamma-glutamyl peptidase 4 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052)"]
["Bra009856","Bra009856",1.302225,150,2.600064,311,2.501746,333,0.271174,34,0.507896,51,0.738866,61,{"v":6.86264833185782e-06,"d":"6.86E-06"},-2.40991895984658,"down","[P]","Inorganic ion transport and metabolism","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: N,N-dimethylaniline monooxygenase activity (GO:0004499);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: auxin biosynthetic process (GO:0009851);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: inflorescence development (GO:0010229);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Biological Process: regulation of anatomical structure morphogenesis (GO:0022603);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: primary metabolic process (GO:0044238);; Molecular Function: indolepyruvate decarboxylase activity (GO:0047434);; Biological Process: cotyledon development (GO:0048825);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Molecular Function: NADP binding (GO:0050661);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: regulation of leaf development (GO:2000024);; ","K11816|0|bna:106348545|K11816 indole-3-pyruvate monooxygenase [EC:1.14.13.168] | (RefSeq) indole-3-pyruvate monooxygenase YUCCA6-like","Tryptophan metabolism (ko00380)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Pyridine nucleotide-disulphide oxidoreductase;; Flavin-binding monooxygenase-like;; L-lysine 6-monooxygenase (NADPH-requiring);; Pyridine nucleotide-disulphide oxidoreductase;; FAD binding domain;; NAD(P)-binding Rossmann-like domain;; Pyridine nucleotide-disulphide oxidoreductase","Indole-3-pyruvate monooxygenase YUCCA6 OS=Arabidopsis thaliana OX=3702 GN=YUC6 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra033189","Bra033189",2.66058,263,10.185306,1018,11.870601,1084,0.057225,5,0,0,0.070027,6,{"v":1.6182692234578e-18,"d":"1.62E-18"},-6.83423496184177,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: potassium ion transport (GO:0006813);; Biological Process: response to salt stress (GO:0009651);; Molecular Function: potassium ion transmembrane transporter activity (GO:0015079);; Molecular Function: sodium ion transmembrane transporter activity (GO:0015081);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sodium ion transmembrane transport (GO:0035725);; Biological Process: potassium ion transmembrane transport (GO:0071805);; ","--","--","[P]","Inorganic ion transport and metabolism","Cation transport protein","Sodium transporter HKT1 OS=Arabidopsis thaliana OX=3702 GN=HKT1 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: sodium transporter HKT1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Bra020299","Bra020299",2.908874,444,7.03987,1113,6.564908,918,0.294437,36,0.101476,12,0.029334,4,{"v":4.55517210109387e-13,"d":"4.56E-13"},-5.12248777316711,"down","--",null,"Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: endosperm development (GO:0009960);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: nitrate transport (GO:0015706);; Biological Process: proline transport (GO:0015824);; Molecular Function: kinase activity (GO:0016301);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: root hair cell differentiation (GO:0048765);; ","--","--","--","--","Carbohydrate-binding protein of the ER;; Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich Repeat","Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana OX=3702 GN=At5g59680 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g59680 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra003500","Bra003500",73.819931,1934,83.730682,2214,68.042809,1649,62.78091,1164,49.053596,875,46.10051,828,{"v":1.09524958550851e-05,"d":"1.10E-05"},-1.06009625521051,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: sulfate transport (GO:0008272);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: DNA mediated transformation (GO:0009294);; Biological Process: photoperiodism (GO:0009648);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: cellular response to sulfate starvation (GO:0009970);; Biological Process: vesicle-mediated transport (GO:0016192);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: single organism reproductive process (GO:0044702);; Biological Process: negative regulation of cell differentiation (GO:0045596);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: multicellular organismal reproductive process (GO:0048609);; Molecular Function: mitogen-activated protein kinase binding (GO:0051019);; Biological Process: nuclear import (GO:0051170);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to glucose stimulus (GO:0071333);; Biological Process: positive regulation of seed maturation (GO:2000693);; ","--","--","--","--","bZIP transcription factor;; Basic region leucine zipper","bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1","K","Transcription","BnaC06g18530D [Brassica napus]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414)"]
["Bra008913","Bra008913",1.555624,145,1.355681,119,1.240549,104,4.057007,252,7.323955,396,5.620712,344,{"v":9.77480980737485e-06,"d":"9.77E-06"},1.37115145505206,"up","[P]","Inorganic ion transport and metabolism","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: transcription from plastid promoter (GO:0042793);; ","--","--","--","--","Integral membrane protein TerC family","Thylakoid membrane protein TERC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TERC PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: thylakoid membrane protein TERC, chloroplastic isoform X2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152)"]
["Bra007931","Bra007931",3.669902,249,2.727103,174,3.909514,228,8.93202,451,9.783089,464,10.815661,465,{"v":1.8412505287838e-05,"d":"1.84E-05"},1.02490514292281,"up","--","--","Biological Process: RNA methylation (GO:0001510);; Cellular Component: nucleus (GO:0005634);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; ","K14831|3.76757e-139|brp:103852672|K14831 protein MAK16 | (RefSeq) protein MAK16 homolog","--","[A]","RNA processing and modification","Ribosomal L28e protein family;; Mak16 protein C-terminal region","--","S","Function unknown","PREDICTED: protein MAK16 homolog [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra027118","Bra027118",1.127215,81,4.075876,295,4.16473,276,1.505831,77,1.205336,59,0.917875,46,0.00546593653409356,-1.8148354592007,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: flavonoid metabolic process (GO:0009812);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance (GO:0032260);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity (GO:0080066);; Molecular Function: 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity (GO:0080067);; Molecular Function: 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity (GO:0080068);; Molecular Function: 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (GO:0080069);; Molecular Function: 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity (GO:0080070);; Molecular Function: indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity (GO:0080071);; Molecular Function: brassinosteroid sulfotransferase activity (GO:0080118);; Molecular Function: hydroxyjasmonate sulfotransferase activity (GO:0080131);; Molecular Function: flavonoid sulfotransferase activity (GO:1990135);; ","--","--","[R]","General function prediction only","Sulfotransferase domain;; Sulfotransferase family","Cytosolic sulfotransferase 18 OS=Arabidopsis thaliana OX=3702 GN=SOT18 PE=1 SV=1","S","Function unknown","PREDICTED: cytosolic sulfotransferase 18-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824)"]
["Bra001845","Bra001845",2.395249,228,3.444363,330,3.403629,299,13.127422,882,12.39399,801,10.038504,653,{"v":2.04021887289009e-05,"d":"2.04E-05"},1.34943677769704,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: cytosol (GO:0005829);; Biological Process: ion transport (GO:0006811);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Molecular Function: abscisic acid glucosyltransferase activity (GO:0010294);; Cellular Component: membrane (GO:0016020);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: abscisic acid catabolic process (GO:0046345);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: quercetin 3'-O-glucosyltransferase activity (GO:0080045);; Molecular Function: quercetin 4'-O-glucosyltransferase activity (GO:0080046);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 71B2 OS=Arabidopsis thaliana OX=3702 GN=UGT71B2 PE=1 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 71B2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020)"]
["Bra019734","Bra019734",140.575775,8755,216.140198,13584,231.232742,13322,55.341293,2439,30.788652,1306,28.269133,1207,{"v":7.94035576651894e-13,"d":"7.94E-13"},-2.85264554681245,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","--","K05933|0|brp:103872037|K05933 aminocyclopropanecarboxylate oxidase [EC:1.14.17.4] | (RefSeq) acoi; 1-aminocyclopropane-1-carboxylate oxidase 3","Cysteine and methionine metabolism (ko00270)","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","1-aminocyclopropane-1-carboxylate oxidase 3 OS=Arabidopsis thaliana OX=3702 GN=At1g12010 PE=2 SV=1","S","Function unknown","PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 3 [Brassica rapa] ","--"]
["Bra007066","Bra007066",3.06025,383,2.563465,335,2.925426,375,12.400451,1145,17.295522,1535,14.432499,1293,{"v":3.01790073390816e-15,"d":"3.02E-15"},1.79226140055072,"up","--","--","Molecular Function: RNA polymerase II transcription factor activity, sequence-specific DNA binding (GO:0000981);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: regulation of glycolytic process (GO:0006110);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of floral meristem growth (GO:0010080);; Biological Process: xylem development (GO:0010089);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: maintenance of shoot apical meristem identity (GO:0010492);; Biological Process: triglyceride biosynthetic process (GO:0019432);; Biological Process: organ growth (GO:0035265);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: positive regulation of fatty acid biosynthetic process (GO:0045723);; Biological Process: seed development (GO:0048316);; Biological Process: root development (GO:0048364);; Biological Process: plant ovule development (GO:0048481);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: leaf phyllotactic patterning (GO:0060772);; Biological Process: auxin mediated signaling pathway involved in phyllotactic patterning (GO:0060774);; Biological Process: positive regulation of cutin biosynthetic process (GO:1901959);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor WRI1 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: signaling (GO:0023052)"]
["Bra003234","Bra003234",47.669994,1184,24.982172,627,18.56496,427,9.478956,167,9.64538,164,11.350645,194,{"v":7.95634409893464e-08,"d":"7.96E-08"},-2.03854763856149,"down","[P]","Inorganic ion transport and metabolism","Biological Process: response to reactive oxygen species (GO:0000302);; Cellular Component: chromatin (GO:0000785);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: high-affinity iron ion transmembrane transport (GO:0006827);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Biological Process: Golgi organization (GO:0007030);; Biological Process: aging (GO:0007568);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: chloroplast inner membrane (GO:0009706);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: leaf morphogenesis (GO:0009965);; Cellular Component: magnesium chelatase complex (GO:0010007);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: heat acclimation (GO:0010286);; Molecular Function: phosphatidylinositol-5-phosphate binding (GO:0010314);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: copper chaperone activity (GO:0016531);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: magnesium chelatase activity (GO:0016851);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: histone H3-K4 methylation (GO:0051568);; ","K07213|1.42054e-53|brp:103830045|K07213 copper chaperone | (RefSeq) copper transport protein CCH","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1","S","Function unknown","PREDICTED: copper transport protein CCH [Brassica rapa]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; molecular function: metallochaperone activity (GO:0016530);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576)"]
["Bra016251","Bra016251",2.84767,183,2.159171,133,1.784913,98,6.992729,337,10.442098,444,10.45141,502,{"v":7.57041420033205e-07,"d":"7.57E-07"},1.58076048762284,"up","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103831539 [Brassica rapa] ","--"]
["Bra013434","Bra013434",1.282797,103,1.291123,101,0.872451,65,8.351641,462,22.412083,1215,30.795867,1614,{"v":1.20751774636073e-11,"d":"1.21E-11"},3.4181093763471,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","Nucleotide-diphospho-sugar transferase","Uncharacterized protein At4g15970 OS=Arabidopsis thaliana OX=3702 GN=At4g15970 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At4g15970 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra004525","Bra004525",6.577117,451,8.332176,576,8.314197,527,2.035271,99,1.740698,82,1.816653,86,{"v":6.15379306822041e-19,"d":"6.15E-19"},-2.57045738461887,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to cold (GO:0009409);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: seed germination (GO:0009845);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: root development (GO:0048364);; ","--","--","--","--","Dof domain, zinc finger","Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3","K","Transcription","PREDICTED: dof zinc finger protein DOF2.5-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra015831","Bra015831",0.888335,26,1.195158,35,1.338047,36,7.709787,155,10.236858,198,12.31496,240,{"v":3.35631840726183e-09,"d":"3.36E-09"},2.46691761305298,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to auxin (GO:0009733);; ","K14488|5.00753e-102|brp:103832008|K14488 SAUR family protein | (RefSeq) auxin-responsive protein SAUR71-like","Plant hormone signal transduction (ko04075)","--","--","Auxin responsive protein","Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1","S","Function unknown","PREDICTED: auxin-responsive protein SAUR71-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra025288","Bra025288",1.228217,171,1.648109,232,1.687276,218,0.346078,35,0.085947,9,0.085063,9,{"v":1.50495166856849e-07,"d":"1.50E-07"},-3.35975696330492,"down","[T]","Signal transduction mechanisms","Molecular Function: phosphorelay sensor kinase activity (GO:0000155);; Biological Process: phosphorelay signal transduction system (GO:0000160);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: 3-phosphoinositide-dependent protein kinase activity (GO:0004676);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: structural molecule activity (GO:0005198);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: microtubule (GO:0005874);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: RNA processing (GO:0006396);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: microtubule-based movement (GO:0007018);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to cold (GO:0009409);; Cellular Component: plastid (GO:0009536);; Biological Process: phototropism (GO:0009638);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to salt stress (GO:0009651);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: blue light signaling pathway (GO:0009785);; Molecular Function: blue light photoreceptor activity (GO:0009882);; Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);; Biological Process: chloroplast avoidance movement (GO:0009903);; Biological Process: chloroplast accumulation movement (GO:0009904);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: positive gravitropism (GO:0009958);; Cellular Component: cell surface (GO:0009986);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of proton transport (GO:0010155);; Molecular Function: FMN binding (GO:0010181);; Biological Process: negative regulation of anion channel activity by blue light (GO:0010362);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Molecular Function: phosphatidylinositol binding (GO:0035091);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: positive regulation of protein kinase activity (GO:0045860);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: stamen development (GO:0048443);; Biological Process: root hair initiation (GO:0048766);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cotyledon development (GO:0048825);; Molecular Function: phosphatidic acid binding (GO:0070300);; Biological Process: response to karrikin (GO:0080167);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K08286|0|brp:103875203|K08286 protein-serine/threonine kinase [EC:2.7.11.-] | (RefSeq) serine/threonine-protein kinase D6PKL3","--","[R]","General function prediction only","Protein kinase domain;; Protein tyrosine kinase","Serine/threonine-protein kinase D6PKL3 OS=Arabidopsis thaliana OX=3702 GN=D6PKL3 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase D6PKL3 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra000511","Bra000511",1.957534,298,0.993288,181,0.509732,121,5.739534,647,6.842292,767,9.125491,756,{"v":5.54643113494915e-08,"d":"5.55E-08"},1.81101803107577,"up","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to chemical (GO:0042221);; Cellular Component: intracellular part (GO:0044424);; ","--","--","[S]","Function unknown","Armadillo/beta-catenin-like repeat","U-box domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUB6 PE=2 SV=2","S","Function unknown","U-box domain-containing protein 6-like isoform X1 [Brassica napus]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra019754","Bra019754",1.42086,246,2.638494,461,2.41905,387,0.670986,83,0.500116,59,0.610628,73,{"v":2.60164190880523e-08,"d":"2.60E-08"},-2.35524071636295,"down","[R]","General function prediction only","Cellular Component: mitochondrion (GO:0005739);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: ion transport (GO:0006811);; Biological Process: defense response (GO:0006952);; ","--","--","[T]","Signal transduction mechanisms","NB-ARC domain;; Leucine rich repeat","Disease resistance protein RPS5 OS=Arabidopsis thaliana OX=3702 GN=RPS5 PE=1 SV=2","S","Function unknown","PREDICTED: probable disease resistance protein At1g12280 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896)"]
["Bra026354","Bra026354",21.611515,447,14.03305,295,19.982118,383,48.769669,706,57.535548,807,62.981662,885,{"v":3.26791453228667e-05,"d":"3.27E-05"},1.03675718293421,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103867091 [Brassica rapa]","--"]
["Bra011390","Bra011390",0.892015,123,0.64181,86,1.52547,186,3.530442,327,5.226924,426,4.835886,418,0.00108690880860915,1.44415678514411,"up","--","--","--","--","--","--","--","--","--","--","--","BnaC07g12110D [Brassica napus]","--"]
["Bra003889","Bra003889",0.179044,35,0.031728,7,0.107846,19,0.77356,104,2.358704,311,2.374389,309,{"v":2.09815486979116e-06,"d":"2.10E-06"},3.25763348111439,"up","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to stress (GO:0006950);; Biological Process: organelle organization (GO:0006996);; Biological Process: signal transduction (GO:0007165);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: epidermis development (GO:0008544);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: endosperm development (GO:0009960);; Biological Process: meristem initiation (GO:0010014);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: lateral root morphogenesis (GO:0010102);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cell growth (GO:0016049);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: single-organism transport (GO:0044765);; Biological Process: pectin catabolic process (GO:0045490);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: leaf development (GO:0048366);; Biological Process: stamen development (GO:0048443);; Biological Process: embryonic meristem development (GO:0048508);; Biological Process: anther development (GO:0048653);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: cell wall organization (GO:0071555);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of seed maturation (GO:2000034);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Receptor protein-tyrosine kinase CEPR2 OS=Arabidopsis thaliana OX=3702 GN=CEPR2 PE=1 SV=1","S","Function unknown","PREDICTED: receptor-like protein kinase HSL1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; cellular component: organelle (GO:0043226);; biological process: reproductive process (GO:0022414);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179)"]
["Bra006871","Bra006871",4.33831,608,6.478715,916,7.374643,956,2.778785,276,3.384514,323,3.041086,292,{"v":1.04653276050704e-05,"d":"1.05E-05"},-1.5266571114513,"down","--","--","--","K12867|3.26743e-06|bna:106367761|K12867 pre-mRNA-splicing factor SYF1 | (RefSeq) pre-mRNA-splicing factor SYF1-like","Spliceosome (ko03040)","--","--","--","--","--","--","BnaC08g46310D [Brassica napus]","--"]
["Bra036328","Bra036328",0.047135,5,0.711929,41,0.635519,34,11.517199,479,9.594661,375,10.535538,415,{"v":3.51620221294096e-07,"d":"3.52E-07"},3.52361811324805,"up","--","--","Biological Process: regionalization (GO:0003002);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: pollen development (GO:0009555);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development (GO:0009790);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: fruit dehiscence (GO:0010047);; Biological Process: leaf senescence (GO:0010150);; Biological Process: positive regulation of cell fate commitment (GO:0010455);; Cellular Component: Cajal body (GO:0015030);; Cellular Component: nuclear membrane (GO:0031965);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: gynoecium development (GO:0048467);; Biological Process: post-embryonic animal organ development (GO:0048569);; Biological Process: animal organ formation (GO:0048645);; Biological Process: root cap development (GO:0048829);; Biological Process: regulation of cell division (GO:0051302);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 69 OS=Arabidopsis thaliana OX=3702 GN=NAC69 PE=1 SV=1","--","--","BnaA09g51630D [Brassica napus]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: metabolic process (GO:0008152);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane-enclosed lumen (GO:0031974)"]
["Brassica_rapa_newGene_4615","--",0,0,0,0,0,0,1.051751,58,1.156138,57,1.183496,41,{"v":3.48954006388284e-09,"d":"3.49E-09"},5.96332054777462,"up","--","--","--","--","--","[UR]","Intracellular trafficking, secretion, and vesicular transport;; General function prediction only","--","Dynamin-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=DRP1A PE=1 SV=3","--","--","PREDICTED: uncharacterized protein LOC106343771 [Brassica oleracea var. oleracea]","--"]
["Bra005062","Bra005062",14.103981,1630,42.989392,5046,41.334834,4492,8.236141,677,4.915392,384,4.295629,338,{"v":4.07962416452856e-08,"d":"4.08E-08"},-2.94743072054497,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Biological Process: membrane organization (GO:0016044);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: regulation of programmed cell death (GO:0043067);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: innate immune response (GO:0045087);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: cell wall organization (GO:0071555);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable receptor-like protein kinase At5g47070 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra017900","Bra017900",0.855341,117,0.961365,136,2.418518,208,0.231236,22,0.068339,9,0,0,0.000598538894835287,-3.27116692002863,"down","--","--","--","K11714|0|brp:103862634|K11714 rhamnogalacturonan II specific xylosyltransferase [EC:2.4.2.-] | (RefSeq) UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like","--","--","--","Nucleotide-diphospho-sugar transferase","UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=RGXT3 PE=1 SV=1","S","Function unknown","UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like [Brassica napus]","--"]
["Bra006150","Bra006150",6.318847,583,4.720412,440,4.500914,384,12.514594,817,16.633539,1045,16.775129,1061,{"v":6.89584310228118e-06,"d":"6.90E-06"},1.01368317060751,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103855964 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra030915","Bra030915",52.748126,3998,92.813941,7129,93.114515,6515,41.48657,2237,14.547255,751,14.392804,743,{"v":3.88688630465814e-05,"d":"3.89E-05"},-2.21887572229555,"down","--","--","Cellular Component: plant-type vacuole (GO:0000325);; Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: endoplasmic reticulum organization (GO:0007029);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to insect (GO:0009625);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: defense response, incompatible interaction (GO:0009814);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: ER body (GO:0010168);; Biological Process: photosynthesis (GO:0015979);; Molecular Function: lipase activity (GO:0016298);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: glucosinolate catabolic process (GO:0019762);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: protein exit from endoplasmic reticulum (GO:0032527);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","Inactive GDSL esterase/lipase-like protein 23 OS=Arabidopsis thaliana OX=3702 GN=GLL23 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: GDSL esterase/lipase 22-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179);; cellular component: extracellular region (GO:0005576)"]
["Bra003323","Bra003323",1.701342,347,1.233484,257,1.238907,261,4.391207,690,6.360712,881,5.98911,832,{"v":3.01478066666831e-11,"d":"3.01E-11"},1.42375301712506,"up","--","--","Molecular Function: intracellular cyclic nucleotide activated cation channel activity (GO:0005221);; Molecular Function: inward rectifier potassium channel activity (GO:0005242);; Molecular Function: cation channel activity (GO:0005261);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: potassium ion transport (GO:0006813);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: signal transduction (GO:0007165);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: cyclic nucleotide binding (GO:0030551);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: innate immune response (GO:0045087);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: pollen tube development (GO:0048868);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to other organism (GO:0051707);; ","K05391|0|brp:103830141|K05391 cyclic nucleotide gated channel, other eukaryote | (RefSeq) probable cyclic nucleotide-gated ion channel 12","Plant-pathogen interaction (ko04626)","[PT]","Inorganic ion transport and metabolism;; Signal transduction mechanisms","Ion transport protein","Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana OX=3702 GN=CNGC12 PE=2 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: probable cyclic nucleotide-gated ion channel 12 isoform X1 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: signaling (GO:0023052);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra017534","Bra017534",0.600074,30,0.098076,7,0.101106,8,2.028992,105,1.01017,56,2.475236,125,0.000650877541351445,2.44242991662904,"up","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC106304139 [Brassica oleracea var. oleracea] ","--"]
["Bra018088","Bra018088",38.361568,1117,71.518257,2101,53.161304,1432,16.051064,331,26.315882,522,20.33609,406,{"v":8.32633707581019e-07,"d":"8.33E-07"},-1.90599337659506,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873178 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra011484","Bra011484",11.207898,595,8.692583,498,7.747168,401,32.894742,1129,33.785179,1228,36.617884,1262,{"v":3.50220579489957e-13,"d":"3.50E-13"},1.23352889899799,"up","--","--","Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842877 isoform X1 [Brassica rapa]","biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896)"]
["Bra017487","Bra017487",0.495592,33,0.337089,22,0.642364,38,3.62245,163,2.914905,128,1.674006,73,0.000742425552484066,1.81200115016973,"up","--","--","--","--","--","--","--","Myb-like DNA-binding domain","Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1","K","Transcription","PREDICTED: uncharacterized protein LOC103839529 [Brassica rapa]","--"]
["Bra008802","Bra008802",8.702205,564,3.560342,233,2.965421,182,1.264717,58,0.564706,24,0.477724,24,{"v":1.70232067441073e-07,"d":"1.70E-07"},-3.01207329040741,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: transcription factor binding (GO:0008134);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: cytokinin biosynthetic process (GO:0009691);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: fruit dehiscence (GO:0010047);; Biological Process: vernalization response (GO:0010048);; Biological Process: somatic embryogenesis (GO:0010262);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: gibberellin catabolic process (GO:0045487);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: plant ovule development (GO:0048481);; Biological Process: meristem development (GO:0048507);; Biological Process: negative regulation of short-day photoperiodism, flowering (GO:0048577);; Biological Process: callose deposition in cell wall (GO:0052543);; Biological Process: negative regulation of floral organ abscission (GO:0060862);; Biological Process: fruit abscission (GO:0060867);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: negative regulation of seed maturation (GO:2000692);; ","K09260|1.11606e-178|brp:103846540|K09260 MADS-box transcription enhancer factor 2A | (RefSeq) agamous-like MADS-box protein AGL15","--","[K]","Transcription","SRF-type transcription factor (DNA-binding and dimerisation domain);; K-box region","Agamous-like MADS-box protein AGL15 OS=Brassica napus OX=3708 GN=AGL15 PE=3 SV=1","K","Transcription","PREDICTED: agamous-like MADS-box protein AGL15 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179)"]
["Bra004907","Bra004907",7.004897,494,5.477849,386,4.932306,319,1.501704,76,0.039238,3,0.846745,38,0.000320463041835925,-2.9713813232591,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: ARF guanyl-nucleotide exchange factor activity (GO:0005086);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: early endosome (GO:0005769);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Biological Process: RNA processing (GO:0006396);; Biological Process: steroid biosynthetic process (GO:0006694);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: tissue development (GO:0009888);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to metal ion (GO:0010038);; Biological Process: regulation of brassinosteroid biosynthetic process (GO:0010422);; Biological Process: pollen exine formation (GO:0010584);; Biological Process: positive regulation of organelle organization (GO:0010638);; Cellular Component: membrane (GO:0016020);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: carotenoid metabolic process (GO:0016116);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: vesicle-mediated transport (GO:0016192);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cytosolic transport (GO:0016482);; Biological Process: histone methylation (GO:0016571);; Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: growth (GO:0040007);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: DNA binding (GO:0043566);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: innate immune response (GO:0045087);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: phyllome development (GO:0048827);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: regulation of catalytic activity (GO:0050790);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: organic substance transport (GO:0071702);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[V]","Defense mechanisms","NAD dependent epimerase/dehydratase family;; GDP-mannose 4,6 dehydratase;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; NAD(P)H-binding;; Male sterility protein","Protein BRI1-5 ENHANCED 1 OS=Arabidopsis thaliana OX=3702 GN=BEN1 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: protein BRI1-5 ENHANCED 1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: guanyl-nucleotide exchange factor activity (GO:0005085);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414)"]
["Bra034390","Bra034390",1.223204,139,0.963552,110,1.148195,120,5.290969,423,4.801759,370,4.960937,384,{"v":4.2118529946729e-14,"d":"4.21E-14"},1.61219437706929,"up","[P]","Inorganic ion transport and metabolism","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: transmembrane transport (GO:0055085);; ","--","--","--","--","Nodulin-like","Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1","S","Function unknown","PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra014663","Bra014663",5.77376,155,5.712251,155,7.020782,174,27.269489,517,25.161129,459,29.074829,534,{"v":1.72116880975699e-10,"d":"1.72E-10"},1.56321555918465,"up","--","--","--","K19034|2.67891e-49|brp:103863079|K19034 50S ribosomal protein 5 | (RefSeq) 50S ribosomal protein 5, chloroplastic-like","--","--","--","--","50S ribosomal protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSRP5 PE=1 SV=1","S","Function unknown","PREDICTED: 50S ribosomal protein 5, chloroplastic-like isoform X2 [Brassica rapa] ","--"]
["Bra035033","Bra035033",2.377497,279,6.202791,733,5.245416,568,0.391059,33,0.144092,12,0.029838,3,{"v":7.03453907598799e-10,"d":"7.03E-10"},-4.58933748998692,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: beta-carotene 15,15'-monooxygenase activity (GO:0003834);; Molecular Function: binding (GO:0005488);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to red light (GO:0010114);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity (GO:0045549);; Biological Process: oxidation-reduction process (GO:0055114);; ","K09840|0|brp:103832319|K09840 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51] | (RefSeq) 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic","Carotenoid biosynthesis (ko00906)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Retinal pigment epithelial membrane protein","9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NCED9 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra017291","Bra017291",2.415331,443,1.525782,284,1.747811,282,6.12132,756,6.58173,752,6.925871,757,{"v":5.46545500800541e-08,"d":"5.47E-08"},1.12734035314786,"up","--","--","Molecular Function: adenine nucleotide transmembrane transporter activity (GO:0000295);; Molecular Function: purine ribonucleotide transmembrane transporter activity (GO:0005346);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: mitochondrial inner membrane (GO:0005743);; Biological Process: generation of precursor metabolites and energy (GO:0006091);; Biological Process: transport (GO:0006810);; Biological Process: cation transport (GO:0006812);; Biological Process: nucleotide transport (GO:0006862);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid envelope (GO:0009526);; Biological Process: response to abiotic stimulus (GO:0009628);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to organic substance (GO:0010033);; Molecular Function: purine nucleoside transmembrane transporter activity (GO:0015211);; Biological Process: organic anion transport (GO:0015711);; Cellular Component: organelle inner membrane (GO:0019866);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: intracellular transport (GO:0046907);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[C]","Energy production and conversion","Mitochondrial carrier protein;; EF-hand domain","Probable S-adenosylmethionine carrier 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SAMC2 PE=2 SV=1","S","Function unknown","putative mitochondrial carrier protein [Arabidopsis thaliana]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra022161","Bra022161",4.625039,418,3.433454,315,2.343753,199,7.133152,444,37.242606,2224,39.791917,2421,0.000272476037437995,2.27403451613438,"up","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: peptide receptor activity (GO:0001653);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein folding (GO:0006457);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: water transport (GO:0006833);; Biological Process: defense response (GO:0006952);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: Golgi organization (GO:0007030);; Biological Process: cell adhesion (GO:0007155);; Cellular Component: proteasome regulatory particle, base subcomplex (GO:0008540);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: photorespiration (GO:0009853);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: membrane (GO:0016020);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate catabolic process (GO:0019762);; Molecular Function: enzyme regulator activity (GO:0030234);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: stamen formation (GO:0048455);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: nitrile biosynthetic process (GO:0080028);; Biological Process: proteasome core complex assembly (GO:0080129);; ","--","--","--","--","Jacalin-like lectin domain","Jacalin-related lectin 35 OS=Arabidopsis thaliana OX=3702 GN=JAL35 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: jacalin-related lectin 35 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological adhesion (GO:0022610);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; molecular function: enzyme regulator activity (GO:0030234);; biological process: growth (GO:0040007)"]
["Bra008958","Bra008958",6.487581,407,3.947521,250,3.199195,186,21.800978,967,23.647257,1010,29.053789,1248,{"v":4.10142087346557e-10,"d":"4.10E-10"},1.89177693844841,"up","[D]","Cell cycle control, cell division, chromosome partitioning","Biological Process: barrier septum assembly (GO:0000917);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: rRNA processing (GO:0006364);; Biological Process: tRNA metabolic process (GO:0006399);; Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast organization (GO:0009658);; ","--","--","[R]","General function prediction only","50S ribosome-binding GTPase;; Ferrous iron transport protein B;; Dynamin family","GTP-binding protein At2g22870 OS=Arabidopsis thaliana OX=3702 GN=EMB2001 PE=2 SV=2","S","Function unknown","PREDICTED: GTP-binding protein At2g22870-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152)"]
["Bra012110","Bra012110",8.734833,1216,9.544261,1252,9.536532,1269,5.382436,518,3.723183,363,4.368934,447,{"v":6.71203678341316e-11,"d":"6.71E-11"},-1.54016191549302,"down","[T]","Signal transduction mechanisms","Biological Process: cell plate assembly (GO:0000919);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA replication initiation (GO:0006270);; Biological Process: regulation of DNA replication (GO:0006275);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: signal transduction (GO:0007165);; Biological Process: cell proliferation (GO:0008283);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to hormone (GO:0009725);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: flower development (GO:0009908);; Biological Process: epidermal cell differentiation (GO:0009913);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: stomatal complex development (GO:0010374);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Biological Process: membrane organization (GO:0016044);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Molecular Function: histone serine kinase activity (GO:0035174);; Biological Process: histone-serine phosphorylation (GO:0035404);; Cellular Component: protein complex (GO:0043234);; Biological Process: cortical microtubule organization (GO:0043622);; Cellular Component: cytoskeletal part (GO:0044430);; Biological Process: protein autophosphorylation (GO:0046777);; Cellular Component: apoplast (GO:0048046);; Biological Process: gametophyte development (GO:0048229);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cell wall organization (GO:0071555);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Kinase-like","Mitogen-activated protein kinase kinase kinase 5 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK5 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991);; cellular component: extracellular region (GO:0005576);; biological process: localization (GO:0051179)"]
["Bra004543","Bra004543",85.05843,9649,94.366313,10826,99.198745,10414,76.426775,6140,50.046001,3868,52.667042,4119,{"v":1.60164398818653e-05,"d":"1.60E-05"},-1.18066359021519,"down","[R]","General function prediction only","Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: jasmonic acid and ethylene-dependent systemic resistance (GO:0009861);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to mycotoxin (GO:0010046);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to UV-B (GO:0010224);; Molecular Function: indole-3-acetic acid amido synthetase activity (GO:0010279);; Biological Process: membrane organization (GO:0016044);; Biological Process: detection of fungus (GO:0016046);; Biological Process: benzoate metabolic process (GO:0018874);; Molecular Function: enzyme binding (GO:0019899);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to lipid (GO:0033993);; Biological Process: positive regulation of plant-type hypersensitive response (GO:0034052);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: small molecule biosynthetic process (GO:0044283);; Biological Process: interspecies interaction between organisms (GO:0044419);; Molecular Function: 4-aminobenzoate amino acid synthetase activity (GO:0052625);; Molecular Function: benzoate amino acid synthetase activity (GO:0052626);; Molecular Function: vanillate amino acid synthetase activity (GO:0052627);; Molecular Function: 4-hydroxybenzoate amino acid synthetase activity (GO:0052628);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of biological quality (GO:0065008);; Molecular Function: adenylyltransferase activity (GO:0070566);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: jasmonate-amino synthetase activity (GO:0080123);; Biological Process: response to alcohol (GO:0097305);; Biological Process: positive regulation of camalexin biosynthetic process (GO:1901183);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; Biological Process: regulation of response to red or far red light (GO:2000030);; Biological Process: regulation of reactive oxygen species metabolic process (GO:2000377);; ","K14506|0|brp:103866475|K14506 jasmonic acid-amino synthetase | (RefSeq) jasmonic acid-amido synthetase JAR1","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","Jasmonic acid-amido synthetase JAR1 OS=Arabidopsis thaliana OX=3702 GN=JAR1 PE=1 SV=2","S","Function unknown","PREDICTED: jasmonic acid-amido synthetase JAR1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra008932","Bra008932",0.811558,57,0.801477,53,0.997942,68,3.536554,170,2.797534,133,4.182463,199,0.000256448478777724,1.39738687224494,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: ceramide metabolic process (GO:0006672);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (GO:0016811);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103846687 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)"]
["Bra007633","Bra007633",4.914186,1079,6.115192,1088,4.840025,783,3.892314,607,3.126922,470,2.55419,386,{"v":8.50813954876419e-05,"d":"8.51E-05"},-1.04538508130608,"down","[MDT]","Cell wall/membrane/envelope biogenesis;; Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: RNA processing (GO:0006396);; Biological Process: ethylene biosynthetic process (GO:0009693);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; ATPase family associated with various cellular activities (AAA);; Domain associated at C-terminal with AAA","AAA-ATPase At2g46620 OS=Arabidopsis thaliana OX=3702 GN=At2g46620 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","BnaA09g55560D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra012287","Bra012287",2.524481,35,6.407417,88,6.195764,78,28.645145,276,28.891464,268,30.635115,286,0.000170393387749257,1.87055398960092,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","[I]","Lipid transport and metabolism","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC108869053 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra016228","Bra016228",0.847004,88,0.800181,84,1.212558,116,0.396073,34,13.98888,988,15.720656,1154,0.00811617516416765,2.41924636191682,"up","--","--","Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism transport (GO:0044765);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","EamA-like transporter family","WAT1-related protein At1g70260 OS=Arabidopsis thaliana OX=3702 GN=At1g70260 PE=2 SV=1","S","Function unknown","PREDICTED: WAT1-related protein At1g70260-like [Brassica rapa]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896)"]
["Bra010557","Bra010557",35.325165,830,103.295464,2447,94.048782,2043,28.782141,478,35.418449,567,39.5718,637,0.000787871565416531,-1.68595886342991,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to insect (GO:0009625);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103834974 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra036492","Bra036492",7.619,478,13.761432,862,11.391263,670,6.86051,298,1.380922,56,0.877135,37,0.00446841166452474,-2.19919465816669,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","PDDEXK-like family of unknown function","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828156 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra026626","Bra026626",2.651491,222,7.404851,624,8.312214,642,0.370708,22,0.033777,2,0.048225,3,{"v":4.80791819819159e-10,"d":"4.81E-10"},-5.09643396312855,"down","--","--","Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: exonuclease activity (GO:0004527);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: phosphatase activity (GO:0016791);; Biological Process: single-organism process (GO:0044699);; Biological Process: xylan biosynthetic process (GO:0045492);; Molecular Function: inositol trisphosphate phosphatase activity (GO:0046030);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Endonuclease/Exonuclease/phosphatase family","Type IV inositol polyphosphate 5-phosphatase 9 OS=Arabidopsis thaliana OX=3702 GN=IP5P9 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: type IV inositol polyphosphate 5-phosphatase 9 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra028101","Bra028101",4.826924,550,2.681576,314,3.002893,314,9.643956,772,10.880298,833,11.529837,899,{"v":5.78296115588489e-05,"d":"5.78E-05"},1.05358420899515,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: serine-type endopeptidase activity (GO:0004252);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: proteolysis (GO:0006508);; Biological Process: protein import into nucleus (GO:0006606);; Molecular Function: serine-type peptidase activity (GO:0008236);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: thylakoid (GO:0009579);; Biological Process: cellular metabolic process (GO:0044237);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Trypsin-like peptidase domain;; Trypsin;; PDZ domain","Protease Do-like 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DEGP10 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: protease Do-like 10, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987)"]
["Bra033430","Bra033430",21.842529,1801,57.703163,4802,60.103012,4585,23.193275,1353,6.56247,369,8.003797,453,0.000265047123656016,-2.30500814569844,"down","[L]","Replication, recombination and repair","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: proline transport (GO:0015824);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: system development (GO:0048731);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: protein autoubiquitination (GO:0051865);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","U-box domain","E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502)"]
["Bra019859","Bra019859",7.351745,1228,8.186836,1410,9.230305,1428,5.320217,578,5.665898,516,5.23778,586,{"v":9.66538696634456e-09,"d":"9.67E-09"},-1.32980234790587,"down","[HT]","Coenzyme transport and metabolism;; Signal transduction mechanisms","Biological Process: organic substance metabolic process (GO:0071704);; ","K08869|0|brp:103871897|K08869 aarF domain-containing kinase | (RefSeq) probable serine/threonine-protein kinase abkC","--","[R]","General function prediction only","ABC1 family","Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABC1K7 PE=1 SV=1","S","Function unknown","PREDICTED: probable serine/threonine-protein kinase abkC [Brassica rapa] ","biological process: metabolic process (GO:0008152)"]
["Bra005301","Bra005301",0.428959,21,1.10061,49,0.745492,34,8.43126,282,6.582039,191,7.044808,234,{"v":7.10760875158988e-08,"d":"7.11E-08"},2.57574014222006,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: fatty acid catabolic process (GO:0009062);; Cellular Component: plastid (GO:0009536);; Biological Process: cytokinin biosynthetic process (GO:0009691);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: leaf shaping (GO:0010358);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: lateral root development (GO:0048527);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: divalent metal ion transport (GO:0070838);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","B3 DNA binding domain","B3 domain-containing protein At2g36080 OS=Arabidopsis thaliana OX=3702 GN=ARF31 PE=2 SV=1","K","Transcription","PREDICTED: B3 domain-containing protein At2g36080-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra040056","Bra040056",3.735228,322,7.75842,684,8.031096,660,1.726947,85,0.577353,33,0.905032,47,{"v":1.23385536852235e-09,"d":"1.23E-09"},-3.25816393512229,"down","[R]","General function prediction only","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: phospholipid binding (GO:0005543);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein complex assembly (GO:0006461);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: signal transduction (GO:0007165);; Biological Process: cell proliferation (GO:0008283);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: embryo sac cellularization (GO:0009558);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Molecular Function: photoreceptor activity (GO:0009881);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: response to organic substance (GO:0010033);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: basipetal auxin transport (GO:0010540);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Biological Process: regulation of phosphate metabolic process (GO:0019220);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: regulation of protein modification process (GO:0031399);; Molecular Function: ribonucleotide binding (GO:0032553);; Biological Process: histone lysine methylation (GO:0034968);; Molecular Function: histone serine kinase activity (GO:0035174);; Biological Process: histone-serine phosphorylation (GO:0035404);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: protein complex (GO:0043234);; Biological Process: regulation of ion transport (GO:0043269);; Cellular Component: cytoskeletal part (GO:0044430);; Biological Process: positive regulation of translation (GO:0045727);; Biological Process: shoot system development (GO:0048367);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; ","--","--","[RT]","General function prediction only;; Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Kinase-like;; Lipopolysaccharide kinase (Kdo/WaaP) family","Serine/threonine-protein kinase AtPK2/AtPK19 OS=Arabidopsis thaliana OX=3702 GN=ATPK2 PE=1 SV=2","T","Signal transduction mechanisms","BnaA01g32300D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; biological process: multi-organism process (GO:0051704)"]
["Bra027823","Bra027823",0.814099,76,2.014129,189,1.627038,140,0.253877,17,0.050243,4,0.258501,17,{"v":6.68239160622617e-06,"d":"6.68E-06"},-3.18354703807961,"down","--","--","Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: response to ozone (GO:0010193);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Molecular Function: ADP binding (GO:0043531);; Biological Process: single-organism process (GO:0044699);; ","--","--","--","--","TIR domain;; TIR domain","Disease resistance protein ADR2 OS=Arabidopsis thaliana OX=3702 GN=ADR2 PE=2 SV=1","--","--","disease resistance protein RML1B-like [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699)"]
["Bra006941","Bra006941",24.022913,1291,39.253208,2129,30.606903,1522,20.19878,768,7.470207,274,6.779905,250,0.000298139049441568,-1.91918085783926,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: anaerobic respiration (GO:0009061);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103841199 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra017324","Bra017324",10.539927,587,16.149136,908,13.208632,681,4.846088,191,3.716863,141,3.189223,122,{"v":4.61636288640374e-11,"d":"4.62E-11"},-2.28314782483218,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: AT DNA binding (GO:0003680);; Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: chromatin organization (GO:0006325);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: leaf senescence (GO:0010150);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: carpel development (GO:0048440);; Biological Process: anther development (GO:0048653);; ","--","--","--","--","Domain of unknown function (DUF296)","AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1","S","Function unknown","PREDICTED: AT-hook motif nuclear-localized protein 21 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414)"]
["Bra028376","Bra028376",1.29389,102,0.992414,79,1.008777,74,3.829057,213,6.111776,328,6.873877,371,{"v":6.06997649632221e-07,"d":"6.07E-07"},1.76377404630541,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: response to cold (GO:0009409);; ","K15032|0|brp:103831672|K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) uncharacterized LOC103831672","--","[KR]","Transcription;; General function prediction only","mTERF","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103831672 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra015135","Bra015135",17.909016,1973,3.383583,355,3.737995,378,25.899699,2045,53.401101,4074,52.635381,4194,0.00579180577464918,1.83874632913524,"up","[G]","Carbohydrate transport and metabolism","--","K00975|0|brp:103828545|K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] | (RefSeq) AGPS, AGPase; glucose-1-phosphate adenylyltransferase small subunit, chloroplastic","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","Nucleotidyl transferase","Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Brassica napus OX=3708 GN=AGPS1 PE=2 SV=1","G","Carbohydrate transport and metabolism","glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Brassica napus] ","--"]
["Bra015960","Bra015960",1.675992,102,0.327458,20,0.072555,5,7.886312,290,12.954999,461,17.785691,629,0.000245149857688117,3.06298924438424,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to stress (GO:0006950);; Biological Process: response to organic substance (GO:0010033);; Biological Process: single-organism metabolic process (GO:0044710);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor BEE 3 OS=Arabidopsis thaliana OX=3702 GN=BEE3 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor BEE 3 [Brassica oleracea var. oleracea] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699)"]
["Bra025213","Bra025213",1.279359,94,1.112277,82,1.2585,85,3.752871,189,5.447566,268,5.035808,246,{"v":9.95575871840335e-06,"d":"9.96E-06"},1.35934193293633,"up","[R]","General function prediction only","Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: chlorophyll catabolic process (GO:0015996);; ","--","--","--","--","Tetratricopeptide repeat","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103875287 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra003239","Bra003239",21.839966,1314,5.981931,359,7.340069,416,3.68953,147,3.680474,155,6.181595,249,0.00103488921243186,-1.80280299531115,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to nutrient levels (GO:0031667);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 70 OS=Arabidopsis thaliana OX=3702 GN=WRKY70 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 70 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra028991","Bra028991",4.502044,395,4.73228,419,4.328772,352,2.357671,147,2.062931,124,1.852076,112,{"v":1.6181392873773e-11,"d":"1.62E-11"},-1.64320075139124,"down","[R]","General function prediction only","Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Biological Process: cell plate assembly (GO:0000919);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoskeleton (GO:0005856);; Biological Process: DNA replication (GO:0006260);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: signal transduction (GO:0007165);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: response to hormone (GO:0009725);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: epidermal cell differentiation (GO:0009913);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: inflorescence development (GO:0010229);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: membrane organization (GO:0016044);; Biological Process: histone methylation (GO:0016571);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Molecular Function: histone serine kinase activity (GO:0035174);; Biological Process: histone-serine phosphorylation (GO:0035404);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: cell wall modification (GO:0042545);; Biological Process: cortical microtubule organization (GO:0043622);; Biological Process: innate immune response (GO:0045087);; Biological Process: protein autophosphorylation (GO:0046777);; Cellular Component: apoplast (GO:0048046);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: response to other organism (GO:0051707);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; cellular component: extracellular region (GO:0005576);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179)"]
["Bra040247","Bra040247",50.92588,554,25.620861,281,54.732685,551,17.611092,136,13.617725,101,20.303589,152,{"v":5.5900397746303e-06,"d":"5.59E-06"},-1.83375629991961,"down","[S]","Function unknown","Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: chromatin assembly or disassembly (GO:0006333);; Biological Process: water transport (GO:0006833);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to cold (GO:0009409);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[R]","General function prediction only","Proteolipid membrane potential modulator","Hydrophobic protein RCI2B OS=Arabidopsis thaliana OX=3702 GN=RCI2B PE=2 SV=1","S","Function unknown","PREDICTED: hydrophobic protein RCI2B [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704)"]
["Bra003212","Bra003212",55.828304,4874,74.642212,6577,71.596626,5783,28.860426,1783,16.201765,964,12.822575,768,{"v":3.88280805725143e-09,"d":"3.88E-09"},-2.30558991212523,"down","--","--","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: cell communication (GO:0007154);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: response to chitin (GO:0010200);; Biological Process: gene silencing (GO:0016458);; Biological Process: covalent chromatin modification (GO:0016569);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: shoot system development (GO:0048367);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: nucleic acid metabolic process (GO:0090304);; ","--","--","--","--","Glycosyl hydrolases family 17;; X8 domain","Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: glucan endo-1,3-beta-glucosidase-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414)"]
["Bra026982","Bra026982",1.197938,84,0.522222,38,0.299982,21,5.395114,271,4.792803,234,6.548397,318,{"v":2.00147108448068e-06,"d":"2.00E-06"},2.42201065285148,"up","[S]","Function unknown","Cellular Component: extracellular region (GO:0005576);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; ","--","--","--","--","Pentapeptide repeats (8 copies);; Pentapeptide repeats (9 copies);; Pentapeptide repeats (9 copies)","Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1","S","Function unknown","PREDICTED: thylakoid lumenal protein TL20.3, chloroplastic [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra037336","Bra037336",6.66175,724,7.205083,790,4.382677,441,3.022932,233,0.687701,51,0.526767,40,0.000459326489119539,-2.42229950199735,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: fatty acid metabolic process (GO:0006631);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Biological Process: suberin biosynthetic process (GO:0010345);; Molecular Function: alkane 1-monooxygenase activity (GO:0018685);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Cellular Component: organelle membrane (GO:0031090);; Biological Process: very long-chain fatty acid biosynthetic process (GO:0042761);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: response to stimulus (GO:0050896);; Biological Process: oxidation-reduction process (GO:0055114);; ","K15398|0|brp:103836926|K15398 fatty acid omega-hydroxylase [EC:1.14.-.-] | (RefSeq) cytochrome P450 86A2","Cutin, suberine and wax biosynthesis (ko00073)","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Cytochrome P450 86A2 OS=Arabidopsis thaliana OX=3702 GN=CYP86A2 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 86A2 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896)"]
["Bra016585","Bra016585",1.270191,125,1.002647,99,0.733575,79,4.637352,316,4.521206,317,5.141278,376,{"v":3.09194672942072e-11,"d":"3.09E-11"},1.68189664013403,"up","--","--","--","--","--","--","--","Protein of unknown function (DUF789)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103835939 [Brassica rapa]","--"]
["Bra012498","Bra012498",9.071248,122,11.437008,155,11.868901,147,7.137541,68,1.95668,18,4.51974,42,0.0046575750790635,-1.69619078210261,"down","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103829132 [Brassica rapa] ","--"]
["Bra039756","Bra039756",469.329303,32507,1866.543162,130365,1700.470054,108953,127.124017,6230,101.959148,4810,97.625864,4635,{"v":6.83801228940623e-14,"d":"6.84E-14"},-4.00656395812332,"down","[E]","Amino acid transport and metabolism","Molecular Function: glutamate-ammonia ligase activity (GO:0004356);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: glutamine biosynthetic process (GO:0006542);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: nitrogen fixation (GO:0009399);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf senescence (GO:0010150);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: nitrate assimilation (GO:0042128);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; ","K01915|0|brp:103852318|K01915 glutamine synthetase [EC:6.3.1.2] | (RefSeq) glutamine synthetase cytosolic isozyme 1-2","Arginine biosynthesis (ko00220);; Alanine, aspartate and glutamate metabolism (ko00250);; Glyoxylate and dicarboxylate metabolism (ko00630);; Nitrogen metabolism (ko00910);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Glutamine synthetase, catalytic domain;; Glutamine synthetase, beta-Grasp domain","Glutamine synthetase cytosolic isozyme 1-2 OS=Arabidopsis thaliana OX=3702 GN=GLN1-2 PE=1 SV=2","E","Amino acid transport and metabolism","PREDICTED: glutamine synthetase cytosolic isozyme 1-2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576)"]
["Bra014853","Bra014853",4.865849,3578,10.603763,7869,10.376607,7059,0.871892,454,0.94278,473,0.910558,459,{"v":3.05868972870024e-21,"d":"3.06E-21"},-3.72374197067688,"down","--","--","--","--","--","--","--","Probable lipid transfer;; Protease inhibitor/seed storage/LTP family","--","S","Function unknown","BnaC04g26730D [Brassica napus]","--"]
["Bra006522","Bra006522",1.8219,85,5.489411,239,6.677061,283,0.202836,10,0.075697,4,0,0,{"v":1.14210659852501e-07,"d":"1.14E-07"},-4.65974985967953,"down","--","--","Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: protein binding involved in protein folding (GO:0044183);; Biological Process: chaperone-mediated protein folding (GO:0061077);; ","--","--","--","--","RbcX protein","Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103856399 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra013294","Bra013294",1.394429,117,2.338298,262,3.358155,315,1.223503,64,0.292809,36,0.687128,42,{"v":9.64617912495885e-05,"d":"9.65E-05"},-2.25927839018275,"down","[J]","Translation, ribosomal structure and biogenesis","Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleolus (GO:0005730);; Biological Process: rRNA processing (GO:0006364);; Biological Process: response to stress (GO:0006950);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: cellular biosynthetic process (GO:0044249);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: shoot system development (GO:0048367);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K13126|0|bna:106391884|K13126 polyadenylate-binding protein | (RefSeq) polyadenylate-binding protein, cytoplasmic and nuclear-like","RNA transport (ko03013);; mRNA surveillance pathway (ko03015);; RNA degradation (ko03018)","[AJ]","RNA processing and modification;; Translation, ribosomal structure and biogenesis","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; Nup53/35/40-type RNA recognition motif;; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; Cytosolic domain of 10TM putative phosphate transporter;; RNA binding motif","Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1","S","Function unknown","PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra018123","Bra018123",1.092528,71,1.083095,71,0.828319,49,4.367871,203,6.345377,283,4.828721,218,{"v":3.53262417115923e-08,"d":"3.53E-08"},1.80797890216293,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: rRNA processing (GO:0006364);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plastid organization (GO:0009657);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: heat shock protein binding (GO:0031072);; Molecular Function: unfolded protein binding (GO:0051082);; Biological Process: iron ion homeostasis (GO:0055072);; ","--","--","--","--","--","Transcription factor bHLH47 OS=Arabidopsis thaliana OX=3702 GN=BHLH47 PE=1 SV=1","S","Function unknown","BnaA06g17240D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896)"]
["Bra031131","Bra031131",8.886743,813,6.836127,642,5.738877,542,4.524547,277,1.784221,157,2.829003,177,{"v":1.63271540287829e-08,"d":"1.63E-08"},-1.72027962623858,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; ","--","--","--","--","Reticulon","Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1","S","Function unknown","PREDICTED: reticulon-like protein B17 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra003553","Bra003553",1.195678,91,1.098048,85,0.826524,59,4.009931,216,2.639737,137,3.257855,170,0.00224673070124824,1.09030067737711,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: cellular process (GO:0009987);; Biological Process: single-organism process (GO:0044699);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra036344","Bra036344",14.799376,1274,14.906119,1292,16.622062,1318,139.336124,8475,193.490375,11324,200.497944,11795,{"v":3.6278393248547e-38,"d":"3.63E-38"},2.93863142396405,"up","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to insect (GO:0009625);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: camalexin biosynthetic process (GO:0010120);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Molecular Function: dihydrocamalexic acid decarboxylase activity (GO:0010298);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Biological Process: detection of bacterium (GO:0016045);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: divalent metal ion transport (GO:0070838);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to nitric oxide (GO:0071732);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 71B23 OS=Arabidopsis thaliana OX=3702 GN=CYP71B23 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","BnaA02g27870D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376)"]
["Bra017206","Bra017206",33.422985,2134,39.251999,2529,38.307571,2262,21.193007,957,11.021478,480,13.918938,609,{"v":8.25317807056038e-08,"d":"8.25E-08"},-1.79167697645694,"down","--","--","Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: ion transport (GO:0006811);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: response to inorganic substance (GO:0010035);; Molecular Function: heme binding (GO:0020037);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K00430|0|brp:103865578|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 21-like","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 21 OS=Arabidopsis thaliana OX=3702 GN=PER21 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 21-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704)"]
["Bra036518","Bra036518",2.345675,141,2.026109,124,1.426798,79,14.320857,607,14.657555,595,10.60594,435,{"v":1.23421164384741e-13,"d":"1.23E-13"},2.18396673084423,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: rRNA binding (GO:0019843);; Biological Process: primary metabolic process (GO:0044238);; ","--","--","--","--","Sigma 54 modulation/S30EA ribosomal protein C terminus;; Sigma 54 modulation protein / S30EA ribosomal protein","Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP1 PE=1 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Brassica rapa]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: organelle part (GO:0044422);; molecular function: binding (GO:0005488)"]
["Bra015164","Bra015164",1.094231,39,0.144977,23,0.223668,32,3.304458,111,3.411706,232,8.508862,372,{"v":1.91139146457895e-06,"d":"1.91E-06"},2.72321154066898,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828515 [Brassica rapa]","--"]
["Bra015374","Bra015374",5.690697,268,8.140958,384,8.865183,401,4.011012,140,2.21762,76,1.931944,68,{"v":3.0729107334071e-05,"d":"3.07E-05"},-1.9054758598084,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to hormone (GO:0009725);; ","--","--","--","--","Auxin response factor;; B3 DNA binding domain","Auxin response factor 9 OS=Arabidopsis thaliana OX=3702 GN=ARF9 PE=1 SV=1","--","--","auxin response factor 9-like isoform X1 [Brassica napus]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra034904","Bra034904",5.64785,262,2.220182,104,2.35181,101,11.432536,376,18.145681,573,16.101095,512,0.000334358195503317,1.59640379300427,"up","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: extracellular region (GO:0005576);; Biological Process: metabolic process (GO:0008152);; ","K08059|1.209e-177|brp:103833329|K08059 interferon, gamma-inducible protein 30 | (RefSeq) gamma-interferon-inducible-lysosomal thiol reductase-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Gamma interferon inducible lysosomal thiol reductase (GILT)","--","S","Function unknown","PREDICTED: gamma-interferon-inducible-lysosomal thiol reductase-like [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152)"]
["Bra027940","Bra027940",83.200226,4117,63.51646,3171,63.723679,2917,37.262367,1305,8.821236,298,8.630678,293,0.000120949445887639,-2.32233178276387,"down","[R]","General function prediction only","Molecular Function: chitinase activity (GO:0004568);; Cellular Component: extracellular region (GO:0005576);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: chitin catabolic process (GO:0006032);; Biological Process: defense response (GO:0006952);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: response to other organism (GO:0051707);; ","K01183|0|brp:103838693|K01183 chitinase [EC:3.2.1.14] | (RefSeq) chitinase; basic endochitinase CHB4-like","Amino sugar and nucleotide sugar metabolism (ko00520)","[R]","General function prediction only","Chitinase class I;; Chitin recognition protein","Basic endochitinase CHB4 OS=Brassica napus OX=3708 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: basic endochitinase CHB4-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704)"]
["Bra014896","Bra014896",3.518168,78,4.437226,100,3.89028,80,2.011062,32,2.607269,40,2.477535,38,0.00309342468974969,-1.25133588949804,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828795 [Brassica rapa]","--"]
["Bra030996","Bra030996",1.144539,161,1.458946,237,1.75165,245,6.191993,666,7.908596,849,5.962457,775,{"v":4.7326170996415e-07,"d":"4.73E-07"},1.71986497588771,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: somatic embryogenesis (GO:0010262);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Cellular Component: CCAAT-binding factor complex (GO:0016602);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: microgametogenesis (GO:0055046);; ","K08064|8.64076e-94|brp:103842742|K08064 nuclear transcription factor Y, alpha | (RefSeq) nuclear transcription factor Y subunit A-8","--","[K]","Transcription","CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B","Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NFYA8 PE=1 SV=2","K","Transcription","PREDICTED: LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-8 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152)"]
["Bra024919","Bra024919",11.847518,622,39.964327,2079,38.979286,1853,13.10845,475,14.848937,517,12.445885,441,0.00167200194565406,-1.68973794542049,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; ","--","--","--","--","Universal stress protein family","U-box domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=PUB37 PE=2 SV=1","S","Function unknown","PREDICTED: U-box domain-containing protein 37 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra018243","Bra018243",6.403624,568,7.10644,727,7.366768,702,0.768878,59,0.091368,9,0.531805,45,{"v":1.06252085757336e-10,"d":"1.06E-10"},-3.93116009619776,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: protein phosphatase binding (GO:0019903);; Biological Process: response to cadmium ion (GO:0046686);; ","K13412|0|brp:103867875|K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 21-like","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; EF hand;; Protein tyrosine kinase;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain pair","Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana OX=3702 GN=CPK21 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: calcium-dependent protein kinase 21-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra001983","Bra001983",1.046288,71,1.742347,119,2.073765,128,0.74285,36,0.55554,26,0.194301,10,0.00173034322137102,-2.06869067971804,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Pollen proteins Ole e I like","--","S","Function unknown","PREDICTED: protodermal factor 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra017445","Bra017445",25.941529,951,38.010115,1390,35.52237,1226,10.912489,287,5.403738,139,7.792887,207,{"v":4.81884672098558e-11,"d":"4.82E-11"},-2.50625043375753,"down","--","--","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: phospholipid binding (GO:0005543);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: GTPase activator activity (GO:0008060);; Biological Process: protein secretion (GO:0009306);; Biological Process: pollen development (GO:0009555);; Biological Process: cell growth (GO:0016049);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: endosomal transport (GO:0016197);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[R]","General function prediction only","C2 domain","Protein C2-DOMAIN ABA-RELATED 10 OS=Arabidopsis thaliana OX=3702 GN=CAR10 PE=2 SV=1","S","Function unknown","PREDICTED: protein C2-DOMAIN ABA-RELATED 10 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: metabolic process (GO:0008152)"]
["Bra030901","Bra030901",8.412339,294,6.929131,245,7.184102,233,24.765545,612,32.23003,767,31.408808,752,{"v":8.90386688718821e-12,"d":"8.90E-12"},1.41150440608151,"up","--","--","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: transcription factor TFIID complex (GO:0005669);; Biological Process: DNA-templated transcription, initiation (GO:0006352);; Biological Process: transcription from RNA polymerase II promoter (GO:0006366);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K03133|1.82406e-93|bna:106434659|K03133 transcription initiation factor TFIID subunit 9B | (RefSeq) transcription initiation factor TFIID subunit 9","Basal transcription factors (ko03022)","[K]","Transcription","Transcription initiation factor IID, 31kD subunit;; CENP-S protein","Transcription initiation factor TFIID subunit 9 OS=Arabidopsis thaliana OX=3702 GN=TAF9 PE=1 SV=1","K","Transcription","transcription initiation factor TFIID subunit 9 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra028911","Bra028911",24.663584,1603,32.903618,2159,27.423018,1649,23.943796,1101,17.020643,754,16.244976,724,0.000206366466541705,-1.11792223678353,"down","[T]","Signal transduction mechanisms","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: sucrose biosynthetic process (GO:0005986);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to nutrient (GO:0007584);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: potassium ion import (GO:0010107);; Biological Process: stomatal movement (GO:0010118);; Biological Process: raffinose family oligosaccharide biosynthetic process (GO:0010325);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: mannitol biosynthetic process (GO:0019593);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: galactinol-sucrose galactosyltransferase activity (GO:0047274);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; NAF domain;; Protein tyrosine kinase;; Kinase-like","CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CIPK15 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: CBL-interacting serine/threonine-protein kinase 15 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra021487","Bra021487",0.811998,114,0.147609,17,0.040323,5,5.487047,382,10.953649,694,7.769742,539,0.000211231073227426,3.15695436834078,"up","[G]","Carbohydrate transport and metabolism","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Molecular Function: starch synthase activity (GO:0009011);; Biological Process: glucan biosynthetic process (GO:0009250);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: amyloplast starch grain (GO:0009568);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: amylopectin biosynthetic process (GO:0010021);; Biological Process: response to nitrate (GO:0010167);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: strictosidine synthase activity (GO:0016844);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: regulation of biological process (GO:0050789);; ","--","--","--","--","Starch synthase catalytic domain","Starch synthase 2, chloroplastic/amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SS2 PE=1 SV=1","G","Carbohydrate transport and metabolism","BnaA01g33320D, partial [Brassica napus]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007)"]
["Bra026134","Bra026134",58.09531,1578,85.320892,2339,68.089989,1711,33.544044,645,47.874813,886,20.840168,388,0.000113847271298887,-1.57236976829616,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: stomatal complex patterning (GO:0010375);; ","--","--","--","--","Domain of unknown function (DUF4666)","Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2","S","Function unknown","PREDICTED: uncharacterized protein At1g15400 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501)"]
["Bra040245","Bra040245",0.537636,57,1.0068,125,1.127481,120,0.014986,2,0,0,0.038557,4,{"v":2.11179572515971e-09,"d":"2.11E-09"},-4.9160421015545,"down","--","--","Molecular Function: RNA binding (GO:0003723);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: metal ion transport (GO:0030001);; Biological Process: histone lysine methylation (GO:0034968);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 43 OS=Arabidopsis thaliana OX=3702 GN=HIPP43 PE=2 SV=1","S","Function unknown","heavy metal-associated isoprenylated plant protein 43 [Brassica napus] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra039875","Bra039875",0.489787,62,0.447075,66,0.734669,90,1.644813,143,2.62902,220,3.482042,331,0.00236152890360597,1.53247445800779,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: endosome (GO:0005768);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: Golgi to vacuole transport (GO:0006896);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Molecular Function: amino-terminal vacuolar sorting propeptide binding (GO:0009940);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: Golgi transport complex (GO:0017119);; Cellular Component: organelle membrane (GO:0031090);; ","--","--","--","--","--","Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana OX=3702 GN=VSR2 PE=2 SV=1","--","--","BnaAnng33750D [Brassica napus] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra000211","Bra000211",135.934571,13873,119.787988,12173,123.364342,11533,83.742368,5983,64.900489,4420,67.115602,4609,{"v":7.11588928147772e-15,"d":"7.12E-15"},-1.36640498460432,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: spermidine metabolic process (GO:0008216);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to UV (GO:0009411);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to auxin (GO:0009733);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: pollen exine formation (GO:0010584);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: flavonoid 3'-monooxygenase activity (GO:0016711);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: innate immune response (GO:0045087);; Molecular Function: p-coumarate 3-hydroxylase activity (GO:0046409);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: tricoumaroylspermidine meta-hydroxylase activity (GO:0072547);; Molecular Function: dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity (GO:0072548);; Molecular Function: monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity (GO:0072549);; Molecular Function: triferuloylspermidine meta-hydroxylase activity (GO:0072550);; Molecular Function: diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity (GO:0072551);; Molecular Function: monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity (GO:0072552);; ","K09754|0|brp:103857960|K09754 coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36] | (RefSeq) cytochrome P450 98A3","Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 98A3 OS=Arabidopsis thaliana OX=3702 GN=CYP98A3 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 98A3 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: immune system process (GO:0002376)"]
["Bra034686","Bra034686",3.05982,117,4.709428,173,2.751279,114,0.722826,22,0.851768,21,0.752083,20,{"v":1.14744358976604e-09,"d":"1.15E-09"},-2.64919979879594,"down","--","--","Biological Process: single-organism cellular process (GO:0044763);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","--","High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1","--","--","BnaA05g25960D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra032268","Bra032268",125.706513,10847,153.975842,13398,155.641875,12409,99.595956,6084,102.824477,6029,89.659619,5269,{"v":4.57452339778885e-07,"d":"4.57E-07"},-1.1337544744527,"down","[E]","Amino acid transport and metabolism","Molecular Function: chorismate synthase activity (GO:0004107);; Cellular Component: nucleolus (GO:0005730);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: amino acid transport (GO:0006865);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: chorismate biosynthetic process (GO:0009423);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: shikimate biosynthetic process (GO:0033587);; ","K01736|0|brp:103868667|K01736 chorismate synthase [EC:4.2.3.5] | (RefSeq) chorismate synthase, chloroplastic-like","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Chorismate synthase","Chorismate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1144 PE=2 SV=2","E","Amino acid transport and metabolism","PREDICTED: chorismate synthase, chloroplastic-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra025083","Bra025083",152.524422,15455,156.695919,29541,201.615661,31608,114.292182,8658,68.160554,5160,33.596387,5177,{"v":2.13725429108031e-06,"d":"2.14E-06"},-2.04390157866937,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: microtubule bundle formation (GO:0001578);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: skotomorphogenesis (GO:0009647);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: response to red light (GO:0010114);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to UV-B (GO:0010224);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Molecular Function: (+)-abscisic acid 8'-hydroxylase activity (GO:0010295);; Biological Process: pollen exine formation (GO:0010584);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: paclitaxel metabolic process (GO:0042616);; Biological Process: abscisic acid catabolic process (GO:0046345);; Biological Process: anther wall tapetum cell differentiation (GO:0048657);; Biological Process: release of seed from dormancy (GO:0048838);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; ","K09843|0|brp:103827806|K09843 (+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93] | (RefSeq) abscisic acid 8'-hydroxylase 3-like","Carotenoid biosynthesis (ko00906)","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Abscisic acid 8&apos;-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=CYP707A3 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: abscisic acid 8&apos;-hydroxylase 3-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: reproduction (GO:0000003);; biological process: multi-organism process (GO:0051704)"]
["Brassica_rapa_newGene_24026","--",1.230349,85,1.667573,116,1.821594,116,0,0,0,0,0.117862,6,{"v":1.07892550636499e-06,"d":"1.08E-06"},-4.62269168236343,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra019605","Bra019605",1.201322,110,0.098328,12,0.50964,43,4.508294,256,3.232131,197,4.431942,262,0.00684854911579288,1.94538042796083,"up","--","--","Biological Process: tRNA dihydrouridine synthesis (GO:0002943);; Biological Process: regulation of nitrogen utilization (GO:0006808);; Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[J]","Translation, ribosomal structure and biogenesis","--","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103873476 isoform X2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra020219","Bra020219",22.406237,2275,49.545724,5073,41.033557,3882,12.328283,914,10.52447,837,9.869184,781,{"v":2.81919099206356e-08,"d":"2.82E-08"},-2.17676892830962,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Cellular Component: extracellular region (GO:0005576);; Biological Process: proteolysis (GO:0006508);; Biological Process: defense response (GO:0006952);; Biological Process: response to organic substance (GO:0010033);; Molecular Function: hydrolase activity (GO:0016787);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K00924|0|brp:103851467|K00924 [EC:2.7.1.-] | (RefSeq) aspartic proteinase-like protein 2","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor N-terminal;; Eukaryotic aspartyl protease;; Xylanase inhibitor C-terminal","Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g65240 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: aspartic proteinase-like protein 2 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra034013","Bra034013",0.118843,27,0.045369,11,0.009971,3,0.244872,39,0.550302,83,0.842202,127,0.00594170328250031,2.30905216076319,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription cofactor activity (GO:0003712);; Molecular Function: histone acetyltransferase activity (GO:0004402);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein acetylation (GO:0006473);; Biological Process: flower development (GO:0009908);; ","K04498|0|brp:103852382|K04498 E1A/CREB-binding protein [EC:2.3.1.48] | (RefSeq) histone acetyltransferase HAC2","--","[K]","Transcription","Histone acetylation protein;; TAZ zinc finger;; Zinc finger, ZZ type","Histone acetyltransferase HAC2 OS=Arabidopsis thaliana OX=3702 GN=HAC2 PE=2 SV=2","B","Chromatin structure and dynamics","PREDICTED: histone acetyltransferase HAC2 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: protein binding transcription factor activity (GO:0000988);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra006397","Bra006397",496.803161,50659,774.978105,79361,821.279611,76603,289.428512,20522,154.261885,10730,146.283837,10144,{"v":6.20761463781779e-09,"d":"6.21E-09"},-2.33847989619568,"down","[E]","Amino acid transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: glutamate decarboxylase activity (GO:0004351);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: glutamate metabolic process (GO:0006536);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: water transport (GO:0006833);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root hair elongation (GO:0048767);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: divalent metal ion transport (GO:0070838);; ","K01580|0|brp:103856243|K01580 glutamate decarboxylase [EC:4.1.1.15] | (RefSeq) glutamate decarboxylase 1","Alanine, aspartate and glutamate metabolism (ko00250);; beta-Alanine metabolism (ko00410);; Taurine and hypotaurine metabolism (ko00430);; Butanoate metabolism (ko00650)","[E]","Amino acid transport and metabolism","Pyridoxal-dependent decarboxylase conserved domain;; Aminotransferase class-V","Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2","E","Amino acid transport and metabolism","PREDICTED: glutamate decarboxylase 1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra005912","Bra005912",4.695451,340,8.055437,627,9.953675,724,0.196573,15,0.592081,32,0.777353,52,{"v":1.00309422336387e-11,"d":"1.00E-11"},-3.92753720839073,"down","--","--","Molecular Function: phosphorelay response regulator activity (GO:0000156);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: radial pattern formation (GO:0009956);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of root meristem growth (GO:0010082);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: leaf senescence (GO:0010150);; Biological Process: abaxial cell fate specification (GO:0010158);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Biological Process: positive regulation of organelle organization (GO:0010638);; Biological Process: regulation of anthocyanin metabolic process (GO:0031537);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: plant ovule development (GO:0048481);; Biological Process: primary root development (GO:0080022);; Biological Process: regulation of seed growth (GO:0080113);; ","--","--","--","--","MYB-CC type transfactor, LHEQLE motif;; Myb-like DNA-binding domain","Myb family transcription factor PHL5 OS=Arabidopsis thaliana OX=3702 GN=PHL5 PE=2 SV=1","S","Function unknown","PREDICTED: myb family transcription factor PHL5-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra017116","Bra017116",3.47763,132,4.605428,176,4.874874,172,3.031523,81,0.909527,25,0.731712,22,0.00459532643104399,-1.84784847245873,"down","--","--","--","--","--","--","--","Domain of unknown function (DUF588);; Membrane-associating domain","CASP-like protein 4B1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_321547 PE=3 SV=1","S","Function unknown","PREDICTED: CASP-like protein 4B1 [Brassica rapa]","--"]
["Bra033357","Bra033357",65.934578,1574,94.048546,2265,79.681564,1759,25.202223,426,13.594644,221,12.104196,198,{"v":4.56178264525471e-12,"d":"4.56E-12"},-2.72369980778065,"down","--","--","Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: hormone activity (GO:0005179);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: cell-cell signaling (GO:0007267);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: negative regulation of growth (GO:0045926);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","--","--","Rapid ALkalinization Factor (RALF)","Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","protein RALF-like 1 [Brassica napus]","molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576);; biological process: localization (GO:0051179)"]
["Bra030918","Bra030918",22.325961,2686,28.237762,3194,42.53218,4380,29.384816,2282,10.034078,801,7.7332,668,0.00901495201035474,-1.46728936166026,"down","[IR]","Lipid transport and metabolism;; General function prediction only","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: extracellular space (GO:0005615);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: induced systemic resistance, ethylene mediated signaling pathway (GO:0009866);; Biological Process: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway (GO:0009871);; Biological Process: proline transport (GO:0015824);; Molecular Function: lipase activity (GO:0016298);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase 5 OS=Arabidopsis thaliana OX=3702 GN=GLIP5 PE=2 SV=2","S","Function unknown","PREDICTED: GDSL esterase/lipase 5 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824)"]
["Bra019589","Bra019589",0.724519,68,0.273945,31,0.255586,26,6.038689,414,2.673637,182,3.173056,215,{"v":1.23979808959078e-06,"d":"1.24E-06"},2.55636315083418,"up","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: stomatal complex morphogenesis (GO:0010103);; ","--","--","--","--","Protein of unknown function (DUF4005);; IQ calmodulin-binding motif","Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana OX=3702 GN=IQD1 PE=1 SV=1","Z","Cytoskeleton","PREDICTED: protein IQ-DOMAIN 1-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra031343","Bra031343",1.356982,173,3.024841,385,2.294141,265,0.221534,22,0,0,0.174174,17,{"v":4.08575939086972e-05,"d":"4.09E-05"},-3.74053037023243,"down","--","--","Biological Process: DNA metabolic process (GO:0006259);; Biological Process: metabolic process (GO:0008152);; Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: cytokinin metabolic process (GO:0009690);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: response to chemical (GO:0042221);; Biological Process: benzene-containing compound metabolic process (GO:0042537);; Molecular Function: cytokinin 7-beta-glucosyltransferase activity (GO:0047807);; Biological Process: seed development (GO:0048316);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: cytokinin 9-beta-glucosyltransferase activity (GO:0080062);; Biological Process: regulation of anthocyanin catabolic process (GO:1900000);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 82A1 OS=Arabidopsis thaliana OX=3702 GN=UGT82A1 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 82A1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra033972","Bra033972",8.433923,110,22.958265,302,20.710825,250,3.390947,32,1.260957,12,7.072257,63,0.000721097854217843,-2.46859205281725,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103852434 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000217","Bra000217",0.980737,110,0.597035,84,0.594113,70,4.125419,307,5.308715,433,7.403089,571,{"v":4.68863663227825e-10,"d":"4.69E-10"},2.23043148591898,"up","--","--","Biological Process: amino acid transmembrane transport (GO:0003333);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: response to organic substance (GO:0010033);; Molecular Function: amino acid transmembrane transporter activity (GO:0015171);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: cell part (GO:0044464);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: epithelium development (GO:0060429);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K15015|0|brp:103857969|K15015 solute carrier family 32 (vesicular inhibitory amino acid transporter) | (RefSeq) vacuolar amino acid transporter 1-like","--","[E]","Amino acid transport and metabolism","Transmembrane amino acid transporter protein","Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2","E","Amino acid transport and metabolism","PREDICTED: vacuolar amino acid transporter 1-like isoform X1 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007)"]
["Bra019961","Bra019961",146.224121,4852,169.343765,5670,177.599319,5451,128.606613,3019,114.143219,2579,112.701263,2563,{"v":2.23276263188934e-06,"d":"2.23E-06"},-1.02727610045953,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871789 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra035154","Bra035154",2.298636,266,1.447206,192,1.978497,200,6.11256,526,6.876116,572,4.404987,460,{"v":3.79945129586763e-08,"d":"3.80E-08"},1.19342821855183,"up","[R]","General function prediction only","Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleus (GO:0005634);; Molecular Function: ferrous iron transmembrane transporter activity (GO:0015093);; Biological Process: ferrous iron transport (GO:0015684);; Cellular Component: integral component of membrane (GO:0016021);; ","K06943|0|brp:103832456|K06943 nucleolar GTP-binding protein | (RefSeq) nucleolar GTP-binding protein 1","Ribosome biogenesis in eukaryotes (ko03008)","[R]","General function prediction only","Nucleolar GTP-binding protein 1 (NOG1);; 50S ribosome-binding GTPase;; Ferrous iron transport protein B","Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g50920 PE=2 SV=1","S","Function unknown","PREDICTED: nucleolar GTP-binding protein 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra022866","Bra022866",55.397908,8509,46.271421,7379,47.213104,6658,31.417728,3171,24.869877,2619,25.756807,2652,{"v":2.31459987719587e-27,"d":"2.31E-27"},-1.45839747069246,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: activation of MAPKK activity (GO:0000186);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: defense response (GO:0006952);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: response to extracellular stimulus (GO:0009991);; Biological Process: response to inorganic substance (GO:0010035);; Cellular Component: membrane (GO:0016020);; Biological Process: phosphorylation (GO:0016310);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular biosynthetic process (GO:0044249);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ development (GO:0048513);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Ankyrin repeats (3 copies);; Ankyrin repeat;; Ankyrin repeats (many copies);; Ankyrin repeats (many copies);; Ankyrin repeat","Integrin-linked protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=ILK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase HT1 isoform X2 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra023103","Bra023103",47.108292,2614,23.676022,1326,24.100033,1238,10.183761,400,4.481411,170,4.361529,166,{"v":2.00321865004183e-09,"d":"2.00E-09"},-2.72885619045928,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: water channel activity (GO:0015250);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root hair elongation (GO:0048767);; Biological Process: hydrogen peroxide transmembrane transport (GO:0080170);; ","K09872|0|brp:103857661|K09872 aquaporin PIP | (RefSeq) aquaporin PIP2-2-like","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Aquaporin PIP2-2 OS=Arabidopsis thaliana OX=3702 GN=PIP2-2 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: aquaporin PIP2-2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra038756","Bra038756",45.012629,4567,4.678224,482,4.417616,417,2.82002,198,2.10127,158,4.019709,161,0.000166232066150804,-2.94643138028674,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: glucan exo-1,3-beta-glucosidase activity (GO:0004338);; Molecular Function: beta-galactosidase activity (GO:0004565);; Molecular Function: beta-mannosidase activity (GO:0004567);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: beta-glucosidase activity (GO:0008422);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: lignin biosynthetic process (GO:0009809);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: carbohydrate catabolic process (GO:0016052);; Cellular Component: cytosolic ribosome (GO:0022626);; Molecular Function: beta-D-fucosidase activity (GO:0033907);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; Molecular Function: cation binding (GO:0043169);; Molecular Function: amygdalin beta-glucosidase activity (GO:0047668);; Molecular Function: beta-L-arabinosidase activity (GO:0047701);; Molecular Function: coniferin beta-glucosidase activity (GO:0047782);; Molecular Function: prunasin beta-glucosidase activity (GO:0050224);; Molecular Function: cellobiose glucosidase activity (GO:0080079);; Molecular Function: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity (GO:0080081);; Molecular Function: esculin beta-glucosidase activity (GO:0080082);; Molecular Function: beta-gentiobiose beta-glucosidase activity (GO:0080083);; ","K05350|0|brp:103861250|K05350 beta-glucosidase [EC:3.2.1.21] | (RefSeq) beta-glucosidase 47-like","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Beta-glucosidase 47 OS=Arabidopsis thaliana OX=3702 GN=BGLU47 PE=3 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: beta-glucosidase 47-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991)"]
["Bra031185","Bra031185",1.874911,176,1.835502,166,1.70159,147,5.704855,352,7.460772,446,5.556296,372,{"v":3.4619885159775e-07,"d":"3.46E-07"},1.20040443248225,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; ","--","--","--","--","--","--","S","Function unknown","BnaA09g43230D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra020646","Bra020646",0.89941,214,0.59322,143,0.606567,134,7.09585,1145,21.7632,3502,18.027845,2939,{"v":8.4562908475512e-17,"d":"8.46E-17"},3.77947380383114,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: beta-glucosidase activity (GO:0008422);; Molecular Function: xylan 1,4-beta-xylosidase activity (GO:0009044);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: seed coat development (GO:0010214);; Biological Process: arabinan catabolic process (GO:0031222);; Biological Process: xylan catabolic process (GO:0045493);; Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);; Biological Process: response to arsenic-containing substance (GO:0046685);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; Glycosyl hydrolase family 3 C-terminal domain;; Glycosyl hydrolase family 3 N terminal domain;; PMR5 N terminal Domain;; Fibronectin type III-like domain","Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-D-xylosidase 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576)"]
["Bra040709","Bra040709",13.669719,1475,10.059062,1819,10.656166,1621,8.497866,900,6.414237,626,5.305853,605,{"v":8.08918048237106e-06,"d":"8.09E-06"},-1.25653990040832,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; ","--","--","[TO]","Signal transduction mechanisms;; Posttranslational modification, protein turnover, chaperones","--","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: OTU domain-containing protein DDB_G0284757 [Brassica oleracea var. oleracea]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra035486","Bra035486",0.793729,26,0.341194,12,0.284837,9,1.816769,42,12.01802,266,7.018411,156,0.000129735932977121,2.95071123986215,"up","[E]","Amino acid transport and metabolism","Molecular Function: glycine dehydrogenase (decarboxylating) activity (GO:0004375);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: glycine cleavage complex (GO:0005960);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: thylakoid (GO:0009579);; Biological Process: plastid organization (GO:0009657);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: photorespiration (GO:0009853);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glycine decarboxylation via glycine cleavage system (GO:0019464);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of catalytic activity (GO:0043085);; ","K02437|9.22936e-99|brp:103833647|K02437 glycine cleavage system H protein | (RefSeq) glycine cleavage system H protein 3, mitochondrial-like","Glycine, serine and threonine metabolism (ko00260);; Glyoxylate and dicarboxylate metabolism (ko00630)","[E]","Amino acid transport and metabolism","Glycine cleavage H-protein","Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: glycine cleavage system H protein 3, mitochondrial-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra010519","Bra010519",3.580926,191,4.151925,198,2.84147,143,9.021222,384,14.436125,464,14.679373,490,{"v":5.25013292914764e-07,"d":"5.25E-07"},1.27320226910304,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; ","--","--","[BK]","Chromatin structure and dynamics;; Transcription","Divergent CRAL/TRIO domain","--","S","Function unknown","PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra012418","Bra012418",47.597485,3667,79.757797,6200,66.20298,4718,36.86116,2009,46.551651,2442,41.330048,2182,0.000217473494236826,-1.18881714417124,"down","[C]","Energy production and conversion","Molecular Function: pyruvate dehydrogenase (acetyl-transferring) activity (GO:0004739);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: mitochondrial matrix (GO:0005759);; Cellular Component: cytosol (GO:0005829);; Biological Process: glycolytic process (GO:0006096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: cobalt ion binding (GO:0050897);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00161|0|brp:103829227|K00161 pyruvate dehydrogenase E1 component alpha subunit [EC:1.2.4.1] | (RefSeq) pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial","Glycolysis / Gluconeogenesis (ko00010);; Citrate cycle (TCA cycle) (ko00020);; Pyruvate metabolism (ko00620);; Carbon metabolism (ko01200)","[C]","Energy production and conversion","Dehydrogenase E1 component;; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;; 1-deoxy-D-xylulose-5-phosphate synthase","Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IAR4 PE=1 SV=2","C","Energy production and conversion","PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra012249","Bra012249",56.2873,8820,67.492651,10712,67.676174,9853,18.514424,2061,11.434993,1224,10.934553,1176,{"v":6.61245791696986e-19,"d":"6.61E-19"},-2.74231992803211,"down","[L]","Replication, recombination and repair","Cellular Component: ubiquitin ligase complex (GO:0000151);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: signal transduction (GO:0007165);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: response to organic substance (GO:0010033);; Biological Process: leaf senescence (GO:0010150);; Biological Process: regulation of chlorophyll catabolic process (GO:0010271);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Biological Process: programmed cell death (GO:0012501);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of response to stimulus (GO:0048583);; Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);; Biological Process: negative regulation of abscisic acid biosynthetic process (GO:0090359);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[S]","Function unknown","U-box domain;; Armadillo/beta-catenin-like repeat;; HEAT repeat;; HEAT repeats;; Armadillo-like","U-box domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=PUB44 PE=1 SV=1","S","Function unknown","PREDICTED: U-box domain-containing protein 44 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra006015","Bra006015",554.511917,30725,598.188547,33442,537.68886,27597,345.396328,13542,254.878032,9613,256.152797,9770,{"v":2.81665838627076e-12,"d":"2.82E-12"},-1.52292773324736,"down","--","--","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: flower development (GO:0009908);; Biological Process: leaf senescence (GO:0010150);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: negative regulation of response to stimulus (GO:0048585);; ","--","--","--","--","No apical meristem (NAM) protein","Protein ATAF2 OS=Arabidopsis thaliana OX=3702 GN=NAC081 PE=1 SV=1","--","--","PREDICTED: protein ATAF2-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414)"]
["Bra012139","Bra012139",46.391689,3669,13.725752,1106,7.193019,672,8.971473,498,4.651582,255,5.718693,324,0.000289923569347142,-2.16102230412448,"down","--","--","Molecular Function: RNA polymerase II transcription factor activity, sequence-specific DNA binding (GO:0000981);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: regulation of glycolytic process (GO:0006110);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of floral meristem growth (GO:0010080);; Biological Process: xylem development (GO:0010089);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: maintenance of shoot apical meristem identity (GO:0010492);; Biological Process: triglyceride biosynthetic process (GO:0019432);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: organ growth (GO:0035265);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: positive regulation of fatty acid biosynthetic process (GO:0045723);; Biological Process: seed development (GO:0048316);; Biological Process: root development (GO:0048364);; Biological Process: plant ovule development (GO:0048481);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: leaf phyllotactic patterning (GO:0060772);; Biological Process: auxin mediated signaling pathway involved in phyllotactic patterning (GO:0060774);; Biological Process: positive regulation of cutin biosynthetic process (GO:1901959);; ","K09284|0|brp:103829531|K09284 AP2-like factor, euAP2 lineage | (RefSeq) AP2-like ethylene-responsive transcription factor TOE3","--","--","--","AP2 domain","AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana OX=3702 GN=TOE3 PE=1 SV=1","K","Transcription","PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: reproductive process (GO:0022414);; biological process: reproduction (GO:0000003);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: signaling (GO:0023052)"]
["Bra006773","Bra006773",3.677894,423,2.013869,222,1.915867,202,1.255386,107,0.338618,31,0.611773,53,0.000260255745206001,-2.05193310564618,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: cell cycle process (GO:0022402);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Cellular Component: nuclear periphery (GO:0034399);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: protein complex (GO:0043234);; Cellular Component: chromosomal part (GO:0044427);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: shoot system development (GO:0048367);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: chromosome organization (GO:0051276);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: nucleic acid metabolic process (GO:0090304);; ","--","--","--","--","KIP1-like protein","Protein NETWORKED 4A OS=Arabidopsis thaliana OX=3702 GN=NET4A PE=2 SV=1","S","Function unknown","PREDICTED: protein NETWORKED 4A-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: metabolic process (GO:0008152);; cellular component: macromolecular complex (GO:0032991);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra020237","Bra020237",81.703995,2648,42.17543,1379,41.778316,1253,37.016926,849,38.999687,861,37.356052,830,0.000369800358734324,-1.0515161132094,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Senescence regulator","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103851491 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra004477","Bra004477",13.277787,1095,12.194397,1004,8.433543,589,7.172673,344,6.838003,292,4.968196,263,{"v":1.51668120463146e-08,"d":"1.52E-08"},-1.58879717437551,"down","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: proline biosynthetic process (GO:0006561);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Biological Process: response to fructose (GO:0009750);; Biological Process: regulation of abscisic acid biosynthetic process (GO:0010115);; Molecular Function: xanthoxin dehydrogenase activity (GO:0010301);; Molecular Function: testosterone dehydrogenase [NAD(P)] activity (GO:0030283);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: single-organism process (GO:0044699);; Biological Process: diterpene phytoalexin precursor biosynthetic process pathway (GO:0051504);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[R]","General function prediction only","Enoyl-(Acyl carrier protein) reductase;; short chain dehydrogenase;; KR domain","Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1","S","Function unknown","PREDICTED: short-chain dehydrogenase reductase 3b isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704)"]
["Bra041129","Bra041129",2.064489,143,4.999372,318,5.930388,354,0.45761,26,0.031452,3,0.031258,3,{"v":8.97575627254847e-07,"d":"8.98E-07"},-4.11963017105647,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: metabolic process (GO:0008152);; Molecular Function: transaminase activity (GO:0008483);; Cellular Component: chloroplast (GO:0009507);; ","--","--","[E]","Amino acid transport and metabolism","--","Branched-chain-amino-acid aminotransferase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g05190 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: branched-chain-amino-acid aminotransferase-like protein 2 [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152)"]
["Brassica_rapa_newGene_12711","--",0.723475,116,0.694945,110,0.918333,128,0.071869,9,0.037299,5,0,0,{"v":6.88068725836017e-08,"d":"6.88E-08"},-4.17036196621416,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra020814","Bra020814",91.20597,5925,186.510014,12041,196.682145,11689,32.038841,1443,8.699596,401,12.214909,566,{"v":2.60361599220293e-10,"d":"2.60E-10"},-3.51515330774966,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein folding (GO:0006457);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: nitric oxide mediated signal transduction (GO:0007263);; Biological Process: response to heat (GO:0009408);; Biological Process: pollen development (GO:0009555);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: response to chitin (GO:0010200);; Biological Process: inorganic anion transport (GO:0015698);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: defense response to virus (GO:0051607);; ","K13426|0|brp:103834286|K13426 WRKY transcription factor 29 | (RefSeq) WRKY29; probable WRKY transcription factor 29","Plant-pathogen interaction (ko04626)","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=WRKY29 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 29 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra036007","Bra036007",24.067173,1414,10.365642,585,8.464997,503,0.116839,10,4.309072,166,3.349397,132,0.00136229602552475,-2.6333585677085,"down","[R]","General function prediction only","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: acid phosphatase activity (GO:0003993);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: response to stress (GO:0006950);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: cell tip growth (GO:0009932);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: cellulose metabolic process (GO:0030243);; Cellular Component: intracellular organelle (GO:0043229);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: root hair elongation (GO:0048767);; Biological Process: divalent metal ion transport (GO:0070838);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","HAD superfamily, subfamily IIIB (Acid phosphatase)","Acid phosphatase 1 OS=Solanum lycopersicum OX=4081 GN=APS1 PE=2 SV=1","S","Function unknown","PREDICTED: acid phosphatase 1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: localization (GO:0051179)"]
["Bra001919","Bra001919",1.118739,205,3.541,542,2.950968,454,1.011687,94,0.671406,66,1.597925,125,0.000153803200166519,-2.06172347237552,"down","[I]","Lipid transport and metabolism","Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Biological Process: response to stress (GO:0006950);; Molecular Function: long-chain fatty acid [acyl-carrier-protein] ligase activity (GO:0008922);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: fatty acid elongation (GO:0030497);; ","K01897|0|brp:103860006|K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] | (RefSeq) probable acyl-activating enzyme 16, chloroplastic","Fatty acid biosynthesis (ko00061);; Fatty acid degradation (ko00071);; Fatty acid metabolism (ko01212);; Peroxisome (ko04146)","[I]","Lipid transport and metabolism","AMP-binding enzyme","Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AAE16 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: probable acyl-activating enzyme 16, chloroplastic isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra023233","Bra023233",1.137178,150,2.715307,384,2.805932,364,0.788451,82,0.327814,32,0.341589,35,{"v":5.17205314607977e-05,"d":"5.17E-05"},-2.5161033931084,"down","[E]","Amino acid transport and metabolism","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; Cellular Component: extracellular region (GO:0005576);; Biological Process: proteolysis (GO:0006508);; Cellular Component: plant-type cell wall (GO:0009505);; Molecular Function: sinapoyltransferase activity (GO:0016752);; Biological Process: secondary metabolic process (GO:0019748);; ","K16296|0|brp:103840196|K16296 serine carboxypeptidase-like clade I [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 18","--","[OE]","Posttranslational modification, protein turnover, chaperones;; Amino acid transport and metabolism","Serine carboxypeptidase","Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana OX=3702 GN=SCPL18 PE=2 SV=2","E","Amino acid transport and metabolism","PREDICTED: LOW QUALITY PROTEIN: serine carboxypeptidase-like 18 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra039694","Bra039694",65.442024,7453,105.682678,12146,88.905418,9367,25.069139,2020,14.518327,1126,12.295401,960,{"v":6.46656338522433e-13,"d":"6.47E-13"},-2.81801918668511,"down","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: catabolic process (GO:0009056);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of metabolic process (GO:0019222);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism developmental process (GO:0044767);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; Molecular Function: pectinesterase inhibitor activity (GO:0046910);; Biological Process: system development (GO:0048731);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Pectinesterase 1 OS=Arabidopsis thaliana OX=3702 GN=PME1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: pectinesterase 1 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; molecular function: enzyme regulator activity (GO:0030234)"]
["Bra029005","Bra029005",4.234013,396,4.533878,389,5.203768,427,11.092765,847,15.990004,1112,16.746942,1140,{"v":5.50918547667549e-07,"d":"5.51E-07"},1.28121885413976,"up","--","--","Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: vacuole organization (GO:0007033);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid inner membrane (GO:0009528);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: embryo sac development (GO:0009553);; Biological Process: response to nematode (GO:0009624);; Biological Process: photosynthetic acclimation (GO:0009643);; Molecular Function: triose-phosphate:phosphate antiporter activity (GO:0009670);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: embryo development (GO:0009790);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: regulation of photosynthesis (GO:0010109);; Biological Process: pollen maturation (GO:0010152);; Molecular Function: phosphoglycerate transmembrane transporter activity (GO:0015120);; Molecular Function: phosphoenolpyruvate:phosphate antiporter activity (GO:0015121);; Molecular Function: glucose-6-phosphate transmembrane transporter activity (GO:0015152);; Molecular Function: antiporter activity (GO:0015297);; Biological Process: phosphoglycerate transport (GO:0015713);; Biological Process: phosphoenolpyruvate transport (GO:0015714);; Biological Process: glucose-6-phosphate transport (GO:0015760);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: lipid particle organization (GO:0034389);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: triose phosphate transmembrane transport (GO:0035436);; Molecular Function: triose-phosphate transmembrane transporter activity (GO:0071917);; Biological Process: response to karrikin (GO:0080167);; ","K15283|0|brp:103857024|K15283 solute carrier family 35, member E1 | (RefSeq) glucose-6-phosphate/phosphate translocator 1, chloroplastic","--","[GE]","Carbohydrate transport and metabolism;; Amino acid transport and metabolism","Triose-phosphate Transporter family;; EamA-like transporter family","Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GPT1 PE=2 SV=1","S","Function unknown","BnaA03g11690D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra021492","Bra021492",2.36816,167,20.521729,1455,19.203428,1248,0,0,0,0,0,0,{"v":1.04032505103066e-21,"d":"1.04E-21"},-8.92123301899038,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: cytoplasm (GO:0005737);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: hydrogen peroxide-mediated programmed cell death (GO:0010421);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: leucocyanidin oxygenase activity (GO:0050589);; Biological Process: oxidation-reduction process (GO:0055114);; ","K06892|0|brp:103842722|K06892 feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-] | (RefSeq) feruloyl CoA ortho-hydroxylase 1-like","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana OX=3702 GN=F6&apos;H1 PE=1 SV=1","S","Function unknown","PREDICTED: feruloyl CoA ortho-hydroxylase 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)"]
["Bra016771","Bra016771",20.964051,1234,16.748476,1005,18.763293,1013,10.468348,451,8.539753,338,8.315045,331,{"v":1.26956911751988e-14,"d":"1.27E-14"},-1.57453476596779,"down","[S]","Function unknown","Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","SNARE associated Golgi protein","--","S","Function unknown","PREDICTED: transmembrane protein 64-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)"]
["Bra012728","Bra012728",2.983499,205,3.168091,224,3.817036,260,0.726967,37,0,0,0.111576,8,0.00127094187739773,-3.21315729126419,"down","[IR]","Lipid transport and metabolism;; General function prediction only","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Molecular Function: binding (GO:0005488);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: multicellular organism development (GO:0007275);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to lithium ion (GO:0010226);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: single-organism transport (GO:0044765);; Biological Process: single-organism developmental process (GO:0044767);; Cellular Component: apoplast (GO:0048046);; Biological Process: anatomical structure development (GO:0048856);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana OX=3702 GN=At4g16230 PE=3 SV=2","S","Function unknown","PREDICTED: GDSL esterase/lipase At4g16230 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; cellular component: extracellular region (GO:0005576)"]
["Bra018645","Bra018645",6.263108,132,2.4347,52,2.742717,54,20.364538,302,37.080181,530,28.095856,404,{"v":6.223686589004e-07,"d":"6.22E-07"},2.2909402632992,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: tissue development (GO:0009888);; Biological Process: cell differentiation (GO:0030154);; ","--","--","--","--","--","Cyclin-dependent protein kinase inhibitor SMR2 OS=Arabidopsis thaliana OX=3702 GN=SMR2 PE=1 SV=1","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: cyclin-dependent protein kinase inhibitor SMR2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra031957","Bra031957",0.887706,47,1.590261,84,1.126065,55,6.950521,256,11.238317,398,7.91049,282,{"v":2.17884303143268e-07,"d":"2.18E-07"},2.19550959784469,"up","[I]","Lipid transport and metabolism","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plastid (GO:0009536);; Biological Process: response to wounding (GO:0009611);; Biological Process: de-etiolation (GO:0009704);; Biological Process: response to sucrose (GO:0009744);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: response to UV-B (GO:0010224);; Biological Process: proline transport (GO:0015824);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Molecular Function: retinyl-palmitate esterase activity (GO:0050253);; Molecular Function: methyl indole-3-acetate esterase activity (GO:0080030);; Molecular Function: methyl salicylate esterase activity (GO:0080031);; Molecular Function: methyl jasmonate esterase activity (GO:0080032);; Biological Process: response to karrikin (GO:0080167);; Biological Process: strigolactone biosynthetic process (GO:1901601);; ","--","--","--","--","Alpha/beta hydrolase family;; alpha/beta hydrolase fold","Strigolactone esterase D14 OS=Arabidopsis thaliana OX=3702 GN=D14 PE=1 SV=1","S","Function unknown","BnaC05g47570D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824)"]
["Bra026170","Bra026170",37.91452,1074,49.152782,1405,51.493774,1350,2.016043,41,2.400451,47,1.069413,21,{"v":2.57614435459834e-40,"d":"2.58E-40"},-5.06523334256988,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103872292 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra035992","Bra035992",23.405403,2394,45.848251,4731,50.296066,4758,12.196815,883,6.287732,438,6.899295,484,{"v":2.89231709770629e-09,"d":"2.89E-09"},-2.71405850878805,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: Golgi organization (GO:0007030);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: response to cold (GO:0009409);; Biological Process: response to UV (GO:0009411);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to sucrose (GO:0009744);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Molecular Function: fatty acid elongase activity (GO:0009922);; Biological Process: cell tip growth (GO:0009932);; Biological Process: wax biosynthetic process (GO:0010025);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: suberin biosynthetic process (GO:0010345);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Cellular Component: membrane (GO:0016020);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: regulation of lipid metabolic process (GO:0019216);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: cellulose metabolic process (GO:0030243);; Biological Process: fatty acid elongation (GO:0030497);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Biological Process: cuticle development (GO:0042335);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: plant ovule development (GO:0048481);; Biological Process: root hair elongation (GO:0048767);; Biological Process: pollen tube development (GO:0048868);; Biological Process: cell wall organization (GO:0071555);; ","K15397|0|brp:103848834|K15397 3-ketoacyl-CoA synthase [EC:2.3.1.199] | (RefSeq) 3-ketoacyl-CoA synthase 20-like","Fatty acid elongation (ko00062)","--","--","FAE1/Type III polyketide synthase-like protein;; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal;; Chalcone and stilbene synthases, C-terminal domain","3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana OX=3702 GN=KCS20 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: 3-ketoacyl-CoA synthase 20-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; biological process: multi-organism process (GO:0051704)"]
["Bra014671","Bra014671",645.635864,18789,563.666016,16554,502.346405,13524,383.896271,7904,255.744568,5069,283.131622,5646,{"v":4.01098474179675e-10,"d":"4.01E-10"},-1.42330386914091,"down","[T]","Signal transduction mechanisms","--","K02183|1.05954e-103|crb:CARUB_v10024013mg|K02183 calmodulin | (RefSeq) hypothetical protein","Phosphatidylinositol signaling system (ko04070);; Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain pair;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region;; EF-hand domain;; Ca2+ insensitive EF hand","Calmodulin-5 OS=Arabidopsis thaliana OX=3702 GN=CAM5 PE=1 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","hypothetical protein CDL15_Pgr003035 [Punica granatum]","--"]
["Bra030660","Bra030660",0.030595,2,0,0,0,0,3.199907,116,7.80371,271,8.235003,287,{"v":4.38105856819779e-17,"d":"4.38E-17"},6.90527226971183,"up","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein targeting to membrane (GO:0006612);; Molecular Function: poly(U) RNA binding (GO:0008266);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Cellular Component: photosystem II oxygen evolving complex (GO:0009654);; Biological Process: plastid organization (GO:0009657);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to sucrose (GO:0009744);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to chitin (GO:0010200);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: photosynthesis (GO:0015979);; Biological Process: cysteine biosynthetic process (GO:0019344);; Cellular Component: extrinsic component of membrane (GO:0019898);; Cellular Component: chloroplast photosystem II (GO:0030095);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; ","K02717|6.01817e-159|brp:103836470|K02717 photosystem II oxygen-evolving enhancer protein 2 | (RefSeq) oxygen-evolving enhancer protein 2, chloroplastic","Photosynthesis (ko00195)","--","--","PsbP","Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba OX=3728 GN=PSBP PE=2 SV=2","S","Function unknown","PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576)"]
["Bra001794","Bra001794",7.23915,288,2.539417,102,2.801002,104,1.973256,56,0.713722,20,1.753338,48,0.00309059034269276,-1.8575622050889,"down","--","--","Molecular Function: copper ion binding (GO:0005507);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: anchored component of membrane (GO:0031225);; Cellular Component: aleurone grain membrane (GO:0032578);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: secondary metabolite biosynthetic process (GO:0044550);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Cellular Component: apoplast (GO:0048046);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","Plastocyanin-like domain","Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=1 SV=2","S","Function unknown","PREDICTED: early nodulin-like protein 3 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: electron carrier activity (GO:0009055);; cellular component: membrane part (GO:0044425);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576)"]
["Bra015463","Bra015463",41.252356,9408,104.474947,13304,71.112861,10976,24.019808,3817,19.000769,2599,20.330885,2755,{"v":2.2655319994015e-11,"d":"2.27E-11"},-1.920721741018,"down","--","--","Biological Process: nuclear-transcribed mRNA catabolic process (GO:0000956);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: photoperiodism, flowering (GO:0048573);; ","K11968|0|brp:103844084|K11968 ariadne-1 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase ARI5","--","[O]","Posttranslational modification, protein turnover, chaperones","IBR domain, a half RING-finger domain","Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana OX=3702 GN=ARI5 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin-protein ligase ARI5 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896)"]
["Bra025186","Bra025186",2.755486,331,6.382688,741,7.432524,793,2.829175,220,3.164552,257,3.008594,240,0.00355760949845988,-1.42160157569318,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: cation binding (GO:0043169);; ","--","--","--","--","Cellulase (glycosyl hydrolase family 5)","--","G","Carbohydrate transport and metabolism","PREDICTED: uncharacterized protein LOC103875318 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra016562","Bra016562",18.951084,611,46.508369,1512,47.784222,1424,25.005541,570,9.006891,198,11.630345,257,0.00224139984715247,-1.78991542998505,"down","--","--","--","--","--","--","--","Domain of unknown function (DUF4228)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103835914 [Brassica rapa]","--"]
["Bra000663","Bra000663",0.146537,10,0,0,0.049253,4,1.269107,61,1.589459,74,1.31501,62,0.000209221826295234,3.25183438891217,"up","--","--","Molecular Function: peroxidase activity (GO:0004601);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Biological Process: response to blue light (GO:0009637);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: response to red light (GO:0010114);; Biological Process: response to far red light (GO:0010218);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Molecular Function: L-ascorbate peroxidase activity (GO:0016688);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: glucosinolate metabolic process (GO:0019760);; Molecular Function: heme binding (GO:0020037);; Cellular Component: organelle membrane (GO:0031090);; ","K00434|0|brp:103858501|K00434 L-ascorbate peroxidase [EC:1.11.1.11] | (RefSeq) thylakoid lumenal 29 kDa protein, chloroplastic","Ascorbate and aldarate metabolism (ko00053);; Glutathione metabolism (ko00480)","--","--","Peroxidase","Thylakoid lumenal 29 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL29 PE=1 SV=2","S","Function unknown","PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra029500","Bra029500",134.98899,17194,88.711304,11459,95.22832,11175,78.537491,7062,62.664761,5445,58.987918,5169,{"v":2.10318801645526e-08,"d":"2.10E-08"},-1.19617108731578,"down","[T]","Signal transduction mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: MAPK cascade (GO:0000165);; Molecular Function: nucleotide binding (GO:0000166);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: anion transport (GO:0006820);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: nitrogen compound transport (GO:0071705);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Salt stress response/antifungal","Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana OX=3702 GN=CRK39 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: putative cysteine-rich receptor-like protein kinase 39 isoform X1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704)"]
["Bra038453","Bra038453",1.72169,234,1.448057,198,1.228446,154,5.10229,489,5.331141,492,4.871479,453,{"v":5.18581920965068e-10,"d":"5.19E-10"},1.2448038018828,"up","--","--","Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: plastid organization (GO:0009657);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: tissue development (GO:0009888);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: chloroplast RNA processing (GO:0031425);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: positive regulation of translation (GO:0045727);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: establishment of localization in cell (GO:0051649);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","--","--","[R]","General function prediction only","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007)"]
["Bra029041","Bra029041",522.031826,39829,511.151443,38991,529.719212,38392,189.07946,10096,154.666426,7833,157.264707,8122,{"v":1.41156060609342e-36,"d":"1.41E-36"},-2.21556700578009,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: luteolin O-methyltransferase activity (GO:0030744);; Molecular Function: quercetin 3-O-methyltransferase activity (GO:0030755);; Biological Process: methylation (GO:0032259);; Molecular Function: myricetin 3'-O-methyltransferase activity (GO:0033799);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: caffeate O-methyltransferase activity (GO:0047763);; Molecular Function: (iso)eugenol O-methyltransferase activity (GO:0050630);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","K13066|0|brp:103857055|K13066 caffeic acid 3-O-methyltransferase [EC:2.1.1.68] | (RefSeq) OMT1-BR-1; flavone 3'-O-methyltransferase 1","Phenylpropanoid biosynthesis (ko00940)","[R]","General function prediction only","O-methyltransferase;; Dimerisation domain;; AdoMet dependent proline di-methyltransferase","Flavone 3&apos;-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=OMT1 PE=1 SV=1","S","Function unknown","PREDICTED: flavone 3&apos;-O-methyltransferase 1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra007105","Bra007105",26.814743,3323,51.277643,6419,53.292065,6119,22.86035,2020,21.808864,1833,19.230189,1636,{"v":3.36790401933875e-05,"d":"3.37E-05"},-1.58245712940919,"down","[L]","Replication, recombination and repair","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: MAPK cascade (GO:0000165);; Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: kinesin complex (GO:0005871);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: kinesin binding (GO:0019894);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: regulation of long-day photoperiodism, flowering (GO:0048586);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);; ","--","--","[S]","Function unknown","Armadillo/beta-catenin-like repeat;; U-box domain;; HEAT repeats","U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1","S","Function unknown","PREDICTED: U-box domain-containing protein 14 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007)"]
["Bra019922","Bra019922",0.595274,73,1.001257,124,0.771123,88,0,0,0,0,0,0,{"v":1.43317804881478e-12,"d":"1.43E-12"},-6.80221636988474,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: response to chitin (GO:0010200);; Biological Process: auxin homeostasis (GO:0010252);; Molecular Function: indole-3-acetic acid amido synthetase activity (GO:0010279);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: detection of fungus (GO:0016046);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: benzoate metabolic process (GO:0018874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: positive regulation of plant-type hypersensitive response (GO:0034052);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: interspecies interaction between organisms (GO:0044419);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: 4-aminobenzoate amino acid synthetase activity (GO:0052625);; Molecular Function: benzoate amino acid synthetase activity (GO:0052626);; Molecular Function: vanillate amino acid synthetase activity (GO:0052627);; Molecular Function: 4-hydroxybenzoate amino acid synthetase activity (GO:0052628);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: positive regulation of camalexin biosynthetic process (GO:1901183);; ","K14487|0|bna:106357918|K14487 auxin responsive GH3 gene family | (RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana OX=3702 GN=GH3.12 PE=1 SV=1","--","--","4-substituted benzoates-glutamate ligase GH3.12 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra028006","Bra028006",139.938385,13032,168.624878,15847,170.372696,14678,112.187202,7391,79.211212,5024,84.546181,5396,{"v":2.67818216098474e-07,"d":"2.68E-07"},-1.34331886468518,"down","[K]","Transcription","Biological Process: MAPK cascade (GO:0000165);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: defense response (GO:0006952);; Biological Process: organelle organization (GO:0006996);; Biological Process: cell cycle (GO:0007049);; Biological Process: signal transduction (GO:0007165);; Biological Process: epidermis development (GO:0008544);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to hormone (GO:0009725);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: regulation of anatomical structure morphogenesis (GO:0022603);; Biological Process: cell differentiation (GO:0030154);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to lipid (GO:0033993);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Molecular Function: signaling receptor activity (GO:0038023);; Biological Process: regulation of growth (GO:0040008);; Biological Process: single-organism transport (GO:0044765);; Biological Process: gametophyte development (GO:0048229);; Biological Process: regulation of meristem development (GO:0048509);; Biological Process: developmental growth (GO:0048589);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: anther development (GO:0048653);; Biological Process: cell division (GO:0051301);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cell wall organization (GO:0071555);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: response to karrikin (GO:0080167);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana OX=3702 GN=IRK PE=1 SV=1","S","Function unknown","PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; biological process: reproductive process (GO:0022414)"]
["Bra038405","Bra038405",3.911744,403,3.510265,390,2.69564,277,1.552522,122,0.382434,33,0.753775,64,{"v":2.19238318731154e-05,"d":"2.19E-05"},-2.22569473817653,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: UDP-N-acetylglucosamine diphosphorylase activity (GO:0003977);; Molecular Function: UTP:glucose-1-phosphate uridylyltransferase activity (GO:0003983);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: UDP-glucose metabolic process (GO:0006011);; Biological Process: UDP-N-acetylglucosamine metabolic process (GO:0006047);; Biological Process: nucleotide-sugar metabolic process (GO:0009225);; Biological Process: UDP-N-acetylgalactosamine metabolic process (GO:0019276);; Molecular Function: UTP-monosaccharide-1-phosphate uridylyltransferase activity (GO:0051748);; Molecular Function: UDP-N-acetylgalactosamine diphosphorylase activity (GO:0052630);; ","K00972|0|brp:103833836|K00972 UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] | (RefSeq) UDP-N-acetylglucosamine diphosphorylase 1","Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","UTP--glucose-1-phosphate uridylyltransferase","UDP-N-acetylglucosamine diphosphorylase 1 OS=Arabidopsis thaliana OX=3702 GN=GLCNAC1PUT1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra035780","Bra035780",0.858399,103,1.386626,164,1.47383,160,0.270776,24,0.01458,2,0.122834,11,{"v":3.69465532955503e-05,"d":"3.69E-05"},-3.21063063411106,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate transport (GO:0008643);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: positive regulation of seed germination (GO:0010030);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: monosaccharide transport (GO:0015749);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: glucose homeostasis (GO:0042593);; Biological Process: transmembrane transport (GO:0055085);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana OX=3702 GN=At3g20460 PE=3 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: putative sugar transporter ERD6-like 13 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra036228","Bra036228",2.583504,267,1.655283,173,1.832927,176,5.699962,417,7.350486,517,5.633356,399,{"v":5.25404913014983e-05,"d":"5.25E-05"},1.06937670102708,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: RNA splicing (GO:0008380);; Cellular Component: plastid (GO:0009536);; Biological Process: embryo development (GO:0009790);; Biological Process: rRNA transcription from plastid promoter (GO:0042794);; ","K15032|0|brp:103836701|K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) transcription termination factor MTERF4, chloroplastic","--","[KR]","Transcription;; General function prediction only","mTERF","Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1","S","Function unknown","PREDICTED: transcription termination factor MTERF4, chloroplastic [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra013226","Bra013226",4.463751,191,28.223988,1216,24.763401,978,0,0,0,0,0,0,{"v":3.49654484102166e-22,"d":"3.50E-22"},-8.89254672910169,"down","[P]","Inorganic ion transport and metabolism","Cellular Component: vacuole (GO:0005773);; Biological Process: transport (GO:0006810);; Cellular Component: membrane (GO:0016020);; Biological Process: iron ion homeostasis (GO:0055072);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to nitric oxide (GO:0071732);; ","--","--","[S]","Function unknown","VIT family","Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana OX=3702 GN=At3g25190 PE=1 SV=1","S","Function unknown","PREDICTED: vacuolar iron transporter homolog 2.1 [Brassica oleracea var. oleracea] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra034001","Bra034001",30.096234,1935,12.425929,803,11.62942,691,8.334953,371,5.575077,233,5.494206,239,{"v":5.99603300201522e-06,"d":"6.00E-06"},-1.956330874469,"down","--","--","Cellular Component: cytoskeleton (GO:0005856);; Biological Process: phagocytosis (GO:0006909);; ","--","--","[S]","Function unknown","ELMO/CED-12 family","--","S","Function unknown","PREDICTED: ELMO domain-containing protein A isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra021678","Bra021678",90.158264,3822,42.354023,1804,45.481659,1802,44.623371,1343,21.399852,621,23.078918,680,0.000763433965523893,-1.45891150628458,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Cellular Component: chloroplast (GO:0009507);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103865086 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra039853","Bra039853",0.617202,50,0.446089,38,0.494016,34,1.597157,91,1.32589,73,1.766269,98,0.00797993155672467,1.03847668717763,"up","[R]","General function prediction only","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: response to wounding (GO:0009611);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: pollen exine formation (GO:0010584);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: methylation (GO:0032259);; Biological Process: cyanidin 3-O-glucoside biosynthetic process (GO:0033485);; Biological Process: delphinidin 3-O-glucoside biosynthetic process (GO:0033486);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: caffeoyl-CoA O-methyltransferase activity (GO:0042409);; Biological Process: pigmentation (GO:0043473);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: seed development (GO:0048316);; Molecular Function: trihydroxyferuloyl spermidine O-methyltransferase activity (GO:0080012);; Molecular Function: caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity (GO:0080076);; Molecular Function: trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity (GO:0080077);; Molecular Function: tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity (GO:0080078);; Biological Process: spermidine hydroxycinnamate conjugate biosynthetic process (GO:0080088);; ","K00588|1.55712e-132|brp:103833446|K00588 caffeoyl-CoA O-methyltransferase [EC:2.1.1.104] | (RefSeq) putative caffeoyl-CoA O-methyltransferase At1g67980","Phenylalanine metabolism (ko00360);; Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","O-methyltransferase;; Methyltransferase domain","Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana OX=3702 GN=At1g67980 PE=2 SV=1","S","Function unknown","PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414)"]
["Bra021395","Bra021395",5.484469,112,11.234837,231,9.041585,171,0.075485,2,0,0,0.090033,2,{"v":2.60644241116694e-16,"d":"2.61E-16"},-6.16971296942135,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: regulation of root development (GO:2000280);; ","--","--","--","--","--","Transcription factor UPBEAT1 OS=Arabidopsis thaliana OX=3702 GN=UPB1 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor UPBEAT1-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra003173","Bra003173",19.341205,910,16.640373,812,17.084611,762,45.432463,1490,62.873924,1963,60.91185,1959,{"v":1.97116703029841e-07,"d":"1.97E-07"},1.06999735522904,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein binding (GO:0005515);; Biological Process: RNA processing (GO:0006396);; Cellular Component: plasmodesma (GO:0009506);; ","--","--","[A]","RNA processing and modification","--","FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana OX=3702 GN=FIP37 PE=1 SV=1","S","Function unknown","PREDICTED: FKBP12-interacting protein of 37 kDa-like isoform X2 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054)"]
["Bra039342","Bra039342",1.300578,123,1.032509,99,1.044728,92,7.205445,478,16.004341,1019,15.477911,992,{"v":1.18719560065358e-13,"d":"1.19E-13"},2.87178793267249,"up","[G]","Carbohydrate transport and metabolism","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: phosphoglycerate kinase activity (GO:0004618);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: glycolytic process (GO:0006096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: defense response, incompatible interaction (GO:0009814);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Cellular Component: stromule (GO:0010319);; Cellular Component: membrane (GO:0016020);; Biological Process: phosphorylation (GO:0016310);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: reductive pentose-phosphate cycle (GO:0019253);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: rhythmic process (GO:0048511);; Biological Process: divalent metal ion transport (GO:0070838);; ","K00927|0|brp:103849710|K00927 phosphoglycerate kinase [EC:2.7.2.3] | (RefSeq) phosphoglycerate kinase 1, chloroplastic-like","Glycolysis / Gluconeogenesis (ko00010);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)","[G]","Carbohydrate transport and metabolism","Phosphoglycerate kinase","Phosphoglycerate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGK1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: phosphoglycerate kinase 1, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: rhythmic process (GO:0048511);; biological process: localization (GO:0051179)"]
["Bra013402","Bra013402",0.376476,27,0.291467,23,0.225511,17,1.078957,57,0.911014,47,1.603504,72,0.00898166105247888,1.30244636083347,"up","--","--","Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);; Cellular Component: nucleus (GO:0005634);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: RNA processing (GO:0006396);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: cell cycle (GO:0007049);; Biological Process: response to virus (GO:0009615);; Biological Process: flower development (GO:0009908);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: leaf development (GO:0048366);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of viral process (GO:0050792);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of primary metabolic process (GO:0080090);; ","K15188|0|brp:103857462|K15188 cyclin T | (RefSeq) cyclin-T1-2","--","[D]","Cell cycle control, cell division, chromosome partitioning","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Cyclin-T1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-2 PE=2 SV=2","DKL","Cell cycle control, cell division, chromosome partitioning;; Transcription;; Replication, recombination and repair","PREDICTED: cyclin-T1-2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra001017","Bra001017",7.035887,363,3.314224,183,2.385196,113,15.123661,557,25.075279,892,22.695839,850,0.000107779314011657,1.7504462148629,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: cytoplasm (GO:0005737);; ","--","--","--","--","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1","S","Function unknown","PREDICTED: binding partner of ACD11 1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra006525","Bra006525",0.561998,24,0.369218,16,0.387422,15,2.229819,66,5.58999,158,3.6883,105,{"v":1.25351306227116e-05,"d":"1.25E-05"},2.41625536152383,"up","--","--","Molecular Function: structural molecule activity (GO:0005198);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","--","--","PAP_fibrillin","Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP8 PE=1 SV=1","S","Function unknown","probable plastid-lipid-associated protein 8, chloroplastic [Brassica napus]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra033602","Bra033602",4.35154,236,4.398251,241,2.868255,144,11.779224,452,11.663152,430,15.334386,569,{"v":8.38851868523083e-05,"d":"8.39E-05"},1.17091246686279,"up","--","--","Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: stress response protein nst1-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Brassica_rapa_newGene_30716","--",0.062315,3,0.092009,4,0.067362,3,2.276543,41,15.771458,350,24.069818,537,{"v":1.42199140783581e-10,"d":"1.42E-10"},5.46786482311574,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Biological Process: transmembrane transport (GO:0055085);; ","--","--","--","--","--","WAT1-related protein At1g70260 OS=Arabidopsis thaliana OX=3702 GN=At1g70260 PE=2 SV=1","S","Function unknown","PREDICTED: WAT1-related protein At1g70260 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra002472","Bra002472",38.336902,3637,40.770109,3911,37.123155,3343,30.474052,2143,14.053728,1230,15.584448,1352,{"v":1.60164398818653e-05,"d":"1.60E-05"},-1.2465392829743,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: potassium ion transport (GO:0006813);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to virus (GO:0009615);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: membrane (GO:0016020);; Biological Process: response to nutrient levels (GO:0031667);; Biological Process: cellular response to extracellular stimulus (GO:0031668);; Biological Process: cellular response to stress (GO:0033554);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: protein autophosphorylation (GO:0046777);; ","K07359|0|brp:103845471|K07359 calcium/calmodulin-dependent protein kinase kinase 2 [EC:2.7.11.17] | (RefSeq) serine/threonine-protein kinase GRIK2","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Kinase-like","Serine/threonine-protein kinase GRIK2 OS=Arabidopsis thaliana OX=3702 GN=GRIK2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase GRIK2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; cellular component: membrane (GO:0016020)"]
["Bra000070","Bra000070",0.476766,20,0.367167,25,0.725872,30,2.815975,94,2.992082,86,3.539491,105,{"v":8.49918662663023e-05,"d":"8.50E-05"},1.78955069777923,"up","[S]","Function unknown","Cellular Component: plastid (GO:0009536);; ","--","--","--","--","PRC-barrel domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103857790 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra002572","Bra002572",0.397119,13,0.130234,5,0.017285,1,2.141012,47,2.938488,62,3.470483,74,0.00029099343847662,2.90358227841282,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","Cyclin-dependent protein kinase inhibitor SMR14 OS=Arabidopsis thaliana OX=3702 GN=SMR14 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103845361 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra001996","Bra001996",6.615433,825,6.662903,897,8.456419,986,2.002278,185,1.605685,134,1.717025,100,{"v":2.91516044140763e-16,"d":"2.92E-16"},-2.70939413123659,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to parasitic fungus (GO:0009623);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Cellular Component: endomembrane system (GO:0012505);; Biological Process: calcium-mediated signaling (GO:0019722);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: cuticle development (GO:0042335);; Biological Process: cell wall modification (GO:0042545);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: cell development (GO:0048468);; Biological Process: animal organ formation (GO:0048645);; Molecular Function: GTPase binding (GO:0051020);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Universal stress protein family","Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra036489","Bra036489",8.52753,579,6.650274,457,7.831666,462,19.766259,973,30.477426,1373,29.790159,1320,{"v":1.28429591297003e-07,"d":"1.28E-07"},1.23796008442192,"up","--","--","--","--","--","--","--","--","Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1","S","Function unknown","BnaA07g00440D [Brassica napus]","--"]
["Bra002882","Bra002882",2.398117,73,3.989213,122,2.20672,62,7.053311,151,14.136072,290,14.16958,292,0.00532453837748991,1.40049611543174,"up","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: vacuolar transport (GO:0007034);; Biological Process: asymmetric cell division (GO:0008356);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: lateral root development (GO:0048527);; Biological Process: fruit morphogenesis (GO:0048530);; ","--","--","[K]","Transcription","HSF-type DNA-binding","Heat shock factor protein HSF8 OS=Solanum lycopersicum OX=4081 GN=HSF8 PE=3 SV=1","K","Transcription","PREDICTED: heat stress transcription factor A-4a-like [Brassica rapa] ","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra002118","Bra002118",20.124708,4104,13.33697,2745,10.976916,2071,10.926384,1577,6.261963,870,7.02729,982,{"v":4.15627591946319e-05,"d":"4.16E-05"},-1.3766628050245,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: cellular component organization (GO:0016043);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: response to stimulus (GO:0050896);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","Plant phosphoribosyltransferase C-terminal;; C2 domain","Protein QUIRKY OS=Arabidopsis thaliana OX=3702 GN=QKY PE=2 SV=1","S","Function unknown","PREDICTED: protein QUIRKY [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152)"]
["Bra040899","Bra040899",527.955319,28615,518.111446,30661,582.761298,30045,418.18254,15995,390.962877,14457,407.27091,15674,{"v":1.22764388613848e-08,"d":"1.23E-08"},-1.00987339257781,"down","[K]","Transcription","Biological Process: regionalization (GO:0003002);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: glycolytic process (GO:0006096);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: Golgi organization (GO:0007030);; Biological Process: signal transduction (GO:0007165);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: embryo sac development (GO:0009553);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: embryo development (GO:0009790);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: cell tip growth (GO:0009932);; Biological Process: meristem initiation (GO:0010014);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: leaf senescence (GO:0010150);; Biological Process: pollen maturation (GO:0010152);; Biological Process: regulation of hormone levels (GO:0010817);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: plant ovule development (GO:0048481);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: anther development (GO:0048653);; Biological Process: defense response to virus (GO:0051607);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; Biological Process: regulation of seed maturation (GO:2000034);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1","S","Function unknown","PREDICTED: somatic embryogenesis receptor kinase 1-like [Brassica rapa] ","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra034047","Bra034047",4.074791,322,6.518321,549,5.759181,435,4.617449,249,3.692196,221,3.418849,195,0.00586886999309277,-1.02728845023659,"down","[T]","Signal transduction mechanisms","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of defense response (GO:0031347);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: protein autophosphorylation (GO:0046777);; ","K04733|0|brp:103848342|K04733 interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1] | (RefSeq) putative serine/threonine-protein kinase","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: putative serine/threonine-protein kinase [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226)"]
["Bra032539","Bra032539",12.253844,695,11.344368,649,10.629289,557,35.992081,1445,33.514652,1293,33.29462,1298,{"v":1.34108530076254e-13,"d":"1.34E-13"},1.035379017671,"up","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: karyogamy (GO:0000741);; Biological Process: RNA methylation (GO:0001510);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrial respiratory chain complex I (GO:0005747);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: photorespiration (GO:0009853);; Biological Process: cell growth (GO:0016049);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: lateral root development (GO:0048527);; Biological Process: cell division (GO:0051301);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: response to nitric oxide (GO:0071731);; Biological Process: proteasome core complex assembly (GO:0080129);; ","K17081|0|brp:103843682|K17081 prohibitin 2 | (RefSeq) prohibitin-2, mitochondrial-like","--","[O]","Posttranslational modification, protein turnover, chaperones","SPFH domain / Band 7 family","Prohibitin-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB2 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: prohibitin-2, mitochondrial-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007)"]
["Bra036833","Bra036833",141.368713,9902,186.890915,13209,144.385223,9355,109.957619,5449,72.059097,3437,63.695095,3057,{"v":4.43850904606468e-06,"d":"4.44E-06"},-1.47946653607555,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: protein binding (GO:0005515);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: glucose catabolic process (GO:0006007);; Molecular Function: GDP-mannose 4,6-dehydratase activity (GO:0008446);; Biological Process: nucleotide-sugar metabolic process (GO:0009225);; Biological Process: unidimensional cell growth (GO:0009826);; Cellular Component: membrane (GO:0016020);; Molecular Function: kinase activity (GO:0016301);; Biological Process: GDP-mannose metabolic process (GO:0019673);; Biological Process: response to chemical (GO:0042221);; Biological Process: 'de novo' GDP-L-fucose biosynthetic process (GO:0042351);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: cell periphery (GO:0071944);; ","K01711|0|brp:103841032|K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] | (RefSeq) GDP-mannose 4,6 dehydratase 2-like","Fructose and mannose metabolism (ko00051);; Amino sugar and nucleotide sugar metabolism (ko00520)","[G]","Carbohydrate transport and metabolism","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; RmlD substrate binding domain;; Polysaccharide biosynthesis protein","GDP-mannose 4,6 dehydratase 2 OS=Arabidopsis thaliana OX=3702 GN=MUR1 PE=1 SV=3","M","Cell wall/membrane/envelope biogenesis","PREDICTED: GDP-mannose 4,6 dehydratase 2-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896)"]
["Bra035898","Bra035898",2.191927,105,3.07204,148,2.904161,128,0.042015,2,0,0,0,0,{"v":2.85971432760737e-15,"d":"2.86E-15"},-6.36939484508362,"down","--","--","--","--","--","--","--","Protein of unknown function (DUF1442)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837409 [Brassica rapa]","--"]
["Bra024921","Bra024921",24.985733,1945,41.80567,3311,37.334233,2828,25.579432,1551,12.255921,726,10.717327,649,0.00136201936363291,-1.49703214464849,"down","--","--","Biological Process: M phase (GO:0000279);; Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: phospholipid binding (GO:0005543);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: membrane fusion (GO:0006944);; Biological Process: organelle organization (GO:0006996);; Molecular Function: GTPase activator activity (GO:0008060);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: protein secretion (GO:0009306);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: embryo sac development (GO:0009553);; Biological Process: pollen development (GO:0009555);; Cellular Component: endomembrane system (GO:0012505);; Biological Process: cell growth (GO:0016049);; Biological Process: endosomal transport (GO:0016197);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: chiasma assembly (GO:0051026);; Biological Process: meiotic cell cycle (GO:0051321);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","--","--","C2 domain","Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana OX=3702 GN=CAR11 PE=1 SV=1","S","Function unknown","PREDICTED: protein PAIR1-like isoform X2 [Brassica rapa]","biological process: biological phase (GO:0044848);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: reproduction (GO:0000003)"]
["Bra018768","Bra018768",5.56385,273,7.463672,407,8.029172,380,2.598119,94,1.273561,46,2.255073,96,{"v":1.49619768262081e-06,"d":"1.50E-06"},-2.16740504632969,"down","--","--","Biological Process: response to molecule of fungal origin (GO:0002238);; Biological Process: response to stress (GO:0006950);; ","--","--","--","--","Universal stress protein family","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871431 [Brassica rapa]","biological process: response to stimulus (GO:0050896)"]
["Bra000185","Bra000185",0.089495,5,0.217839,13,0.052359,4,0.76001,39,1.314946,76,0.734824,39,0.00130677317831265,2.46229801219929,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to stress (GO:0006950);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: flower development (GO:0009908);; Biological Process: response to organic substance (GO:0010033);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K10523|2.70338e-125|brp:103857930|K10523 speckle-type POZ protein | (RefSeq) putative BTB/POZ domain-containing protein At2g40450","--","[DR]","Cell cycle control, cell division, chromosome partitioning;; General function prediction only","BTB/POZ domain","Putative BTB/POZ domain-containing protein At2g40450 OS=Arabidopsis thaliana OX=3702 GN=At2g40450 PE=3 SV=1","S","Function unknown","PREDICTED: putative BTB/POZ domain-containing protein At2g40450 isoform X2 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra029816","Bra029816",2.093568,228,2.478599,264,2.248146,236,1.495905,115,1.205719,112,1.570482,142,0.000614625004267187,-1.02476428336992,"down","--","--","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: transcription factor TFIID complex (GO:0005669);; Biological Process: DNA-templated transcription, initiation (GO:0006352);; Biological Process: transcription from RNA polymerase II promoter (GO:0006366);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Molecular Function: kinase activity (GO:0016301);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Cellular Component: cell periphery (GO:0071944);; ","K03126|0|brp:103870492|K03126 transcription initiation factor TFIID subunit 12 | (RefSeq) transcription initiation factor TFIID subunit 12","Basal transcription factors (ko03022)","[K]","Transcription","Transcription initiation factor TFIID subunit A;; Histone-like transcription factor (CBF/NF-Y) and archaeal histone","Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702 GN=TAF12 PE=1 SV=1","K","Transcription","PREDICTED: transcription initiation factor TFIID subunit 12 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824)"]
["Bra035266","Bra035266",0.859039,67,0.535435,45,0.444929,30,1.821597,84,3.981027,192,2.600387,119,0.00979888095736866,1.39469746675311,"up","--","--","Cellular Component: ubiquitin ligase complex (GO:0000151);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: ubiquitin-ubiquitin ligase activity (GO:0034450);; Biological Process: cellular process regulating host cell cycle in response to virus (GO:0060154);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","--","E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana OX=3702 GN=RKP PE=2 SV=2","S","Function unknown","BnaA01g27060D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007)"]
["Bra036353","Bra036353",11.687296,894,12.221573,943,13.06276,924,8.451828,458,7.003783,365,6.86292,360,{"v":1.09759264823716e-08,"d":"1.10E-08"},-1.27363501215594,"down","--","--","--","--","--","--","--","F-box domain","F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1","S","Function unknown","PREDICTED: F-box protein SKIP14-like [Brassica rapa]","--"]
["Bra020377","Bra020377",1.571615,129,0.67941,93,0.886274,114,0.989452,60,0.966589,54,0.869362,49,0.00226442345402758,-1.0709018385297,"down","[T]","Signal transduction mechanisms","Biological Process: polysaccharide catabolic process (GO:0000272);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: amino acid transport (GO:0006865);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: xylem development (GO:0010089);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: cell wall modification (GO:0042545);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Cellular Component: apical part of cell (GO:0045177);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Molecular Function: tau-protein kinase activity (GO:0050321);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: positive regulation of secondary growth (GO:2000605);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase","Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana OX=3702 GN=At5g58300 PE=2 SV=1","--","--","PREDICTED: probable inactive receptor kinase At5g58300 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra005991","Bra005991",0.393187,24,0.35444,26,0.502491,31,2.495228,113,4.058496,180,4.463597,169,{"v":7.12710266964595e-08,"d":"7.13E-08"},2.36680638636007,"up","--","--","Biological Process: photosystem II assembly (GO:0010207);; ","--","--","--","--","Protein of unknown function (DUF3531)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103855782 [Brassica rapa]","biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra004503","Bra004503",0.220602,29,0.296061,40,0.359425,42,2.00109,165,4.49574,383,4.274941,371,{"v":1.76001242062629e-08,"d":"1.76E-08"},2.8454847289398,"up","--","--","Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to cold (GO:0009409);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: response to organonitrogen compound (GO:0010243);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Molecular Function: protein domain specific binding (GO:0019904);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Biological Process: regulation of protein homodimerization activity (GO:0043496);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: long-day photoperiodism, flowering (GO:0048574);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Myb-like DNA-binding domain","Protein CCA1 OS=Arabidopsis thaliana OX=3702 GN=CCA1 PE=1 SV=1","K","Transcription","PREDICTED: cataract, congenital, cerulean type, 1 isoform X2 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra037751","Bra037751",0.9917,134,0.806253,111,0.619883,79,3.749685,364,7.367434,678,9.117129,856,{"v":4.89372477115983e-09,"d":"4.89E-09"},2.44664755500468,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","[K]","Transcription","SWIB/MDM2 domain;; Plus-3 domain","Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2","B","Chromatin structure and dynamics","BnaA09g52320D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra032383","Bra032383",81.856255,8401,209.360336,21683,200.532349,19039,33.60717,2441,35.097565,2454,37.288719,2623,{"v":4.60389464214836e-10,"d":"4.60E-10"},-2.71172371734147,"down","[I]","Lipid transport and metabolism","Molecular Function: triglyceride lipase activity (GO:0004806);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: lipid droplet (GO:0005811);; Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: phosphatidylcholine 1-acylhydrolase activity (GO:0008970);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: leaf senescence (GO:0010150);; Biological Process: seed coat development (GO:0010214);; Biological Process: triglyceride catabolic process (GO:0019433);; Biological Process: negative regulation of cell growth (GO:0030308);; Molecular Function: galactolipase activity (GO:0047714);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[I]","Lipid transport and metabolism","Lipase (class 3)","Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06800 PE=1 SV=2","S","Function unknown","PREDICTED: phospholipase A1-Igamma1, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra021433","Bra021433",185.271362,9526,112.229942,5823,91.421028,4349,93.027107,3384,89.181511,3123,80.934448,2852,0.000101506138040995,-1.07341652637726,"down","--","--","Biological Process: response to hypoxia (GO:0001666);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: nitrate transport (GO:0015706);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: simple leaf morphogenesis (GO:0060776);; ","--","--","--","--","Lateral organ boundaries (LOB) domain","LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1","S","Function unknown","PREDICTED: LOB domain-containing protein 41-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra004504","Bra004504",2.100934,107,0.452482,24,0.671935,29,4.584233,174,13.715528,395,6.297627,221,0.00115466196786298,2.15909938297097,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Cellular Component: plastid chromosome (GO:0009508);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosystem II assembly (GO:0010207);; Cellular Component: chloroplast photosystem I (GO:0030093);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; ","--","--","--","--","CAAD domains of cyanobacterial aminoacyl-tRNA synthetase","Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2","S","Function unknown","PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Brassica_rapa_newGene_24402","--",4.155846,289,2.217101,177,2.104762,136,11.335424,591,14.962782,779,16.694426,865,{"v":1.8988330702499e-08,"d":"1.90E-08"},1.84411280780449,"up","--","--","--","--","--","[L]","Replication, recombination and repair","--","--","--","--","PREDICTED: uncharacterized protein LOC108869387 [Brassica rapa]","--"]
["Bra018505","Bra018505",5.434675,712,8.846976,1125,10.049029,1179,3.584698,321,1.543804,143,2.616108,234,{"v":1.51412940227377e-06,"d":"1.51E-06"},-2.1270458631864,"down","[G]","Carbohydrate transport and metabolism","Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: monosaccharide transport (GO:0015749);; Biological Process: biological regulation (GO:0065007);; ","K08145|0|brp:103868166|K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8 | (RefSeq) sugar transporter ERD6-like 15","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana OX=3702 GN=At4g04760 PE=3 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: sugar transporter ERD6-like 15 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007)"]
["Bra007035","Bra007035",1.30363,148,1.043177,120,0.699165,74,0.050665,5,0.263159,21,0.074363,6,{"v":5.15277901986141e-06,"d":"5.15E-06"},-3.13603150995926,"down","[E]","Amino acid transport and metabolism","Molecular Function: transporter activity (GO:0005215);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cation transport (GO:0006812);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to nematode (GO:0009624);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: pollen tube growth (GO:0009860);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Molecular Function: high-affinity oligopeptide transporter activity (GO:0015334);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: dipeptide transporter activity (GO:0042936);; Molecular Function: tripeptide transporter activity (GO:0042937);; Biological Process: dipeptide transport (GO:0042938);; Biological Process: tripeptide transport (GO:0042939);; Biological Process: response to leucine (GO:0043201);; Biological Process: intracellular transport (GO:0046907);; Biological Process: response to histidine (GO:0080052);; Biological Process: response to phenylalanine (GO:0080053);; ","--","--","[E]","Amino acid transport and metabolism","POT family;; Major Facilitator Superfamily","Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2","E","Amino acid transport and metabolism","PREDICTED: protein NRT1/ PTR FAMILY 5.7-like [Brassica rapa] ","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425)"]
["Bra030692","Bra030692",171.837011,6307,968.990153,35851,868.068744,29396,54.092879,1387,36.776593,914,42.071074,1049,{"v":4.02802963906286e-12,"d":"4.03E-12"},-4.22433215964885,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: endosperm development (GO:0009960);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: nitrate transport (GO:0015706);; Biological Process: proline transport (GO:0015824);; Molecular Function: kinase activity (GO:0016301);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: root hair cell differentiation (GO:0048765);; ","--","--","--","--","Carbohydrate-binding protein of the ER","Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=Arabidopsis thaliana OX=3702 GN=At2g14510 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra001449","Bra001449",2.374288,185,0.917798,72,0.774731,42,7.354653,362,5.758964,295,5.761948,275,0.00415011740702939,1.57893732253697,"up","--","--","--","--","--","--","--","--","Protein LNK3 OS=Arabidopsis thaliana OX=3702 GN=LNK3 PE=1 SV=1","S","Function unknown","PREDICTED: protein LNK3-like isoform X1 [Brassica rapa]","--"]
["Bra022935","Bra022935",53.942527,5911,43.651073,4906,50.180565,5073,29.718727,2279,12.063209,910,15.953064,1149,{"v":1.07519987393222e-06,"d":"1.08E-06"},-1.87980731776416,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; ","--","--","--","--","Domain of unknown function (DUF3527)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103857484 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra001365","Bra001365",2.654546,224,2.084828,177,2.729537,213,8.836646,527,11.866873,679,8.98805,520,{"v":3.10961541993748e-08,"d":"3.11E-08"},1.423600607402,"up","--","--","Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: RNA methylation (GO:0001510);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosol (GO:0005829);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: proline biosynthetic process (GO:0006561);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development (GO:0009790);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: camalexin biosynthetic process (GO:0010120);; Biological Process: organ boundary specification between lateral organs and the meristem (GO:0010199);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: positive regulation of cell fate commitment (GO:0010455);; Cellular Component: Cajal body (GO:0015030);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: floral organ development (GO:0048437);; Biological Process: gynoecium development (GO:0048467);; Biological Process: root cap development (GO:0048829);; Biological Process: negative regulation of cell division (GO:0051782);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain containing protein 50 OS=Arabidopsis thaliana OX=3702 GN=NAC050 PE=1 SV=1","S","Function unknown","PREDICTED: NAC domain-containing protein 4-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane-enclosed lumen (GO:0031974);; biological process: reproductive process (GO:0022414)"]
["Bra007636","Bra007636",1.407206,146,3.071705,321,2.097262,201,0.100291,8,1.197436,85,0.252056,18,0.00707748160338111,-2.30680153284165,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: protein binding (GO:0005515);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: positive regulation of cell proliferation (GO:0008284);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to UV (GO:0009411);; Cellular Component: chloroplast (GO:0009507);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: response to organic substance (GO:0010033);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: inflorescence development (GO:0010229);; Biological Process: leaf formation (GO:0010338);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: regulation of growth rate (GO:0040009);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: positive regulation of organ growth (GO:0046622);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: seed development (GO:0048316);; Biological Process: carpel morphogenesis (GO:0048445);; Biological Process: regulation of timing of animal organ formation (GO:0048504);; Biological Process: positive regulation of cell division (GO:0051781);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 78A9 OS=Arabidopsis thaliana OX=3702 GN=CYP78A9 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 78A9 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020)"]
["Bra027362","Bra027362",15.449641,3614,21.5269,5129,21.228645,4605,16.2105,2698,10.203834,1692,12.984967,2120,0.000604436487832978,-1.09329743535873,"down","--","--","Molecular Function: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (GO:0004439);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: response to stress (GO:0006950);; Biological Process: cell adhesion (GO:0007155);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: inositol trisphosphate metabolic process (GO:0032957);; Biological Process: phosphatidylinositol-3-phosphate biosynthetic process (GO:0036092);; Molecular Function: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity (GO:0043813);; Biological Process: actin nucleation (GO:0045010);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: inositol phosphate dephosphorylation (GO:0046855);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[I]","Lipid transport and metabolism","SacI homology domain","Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana OX=3702 GN=SAC2 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: phosphoinositide phosphatase SAC2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological adhesion (GO:0022610);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra025530","Bra025530",23.872937,1762,26.895371,2049,27.517162,1911,20.097426,1065,13.353294,682,14.098361,729,{"v":7.40313598422735e-06,"d":"7.40E-06"},-1.25874295589365,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: glutathione transferase activity (GO:0004364);; Cellular Component: cytosol (GO:0005829);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: protein glutathionylation (GO:0010731);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: response to cadmium ion (GO:0046686);; ","K00799|1.97664e-82|brp:103864045|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase L3-like","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain","Glutathione S-transferase L3 OS=Arabidopsis thaliana OX=3702 GN=GSTL3 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase L3-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896)"]
["Bra004319","Bra004319",10.556392,1902,4.735224,864,5.167125,867,22.464956,2863,27.416861,3369,23.601487,2912,{"v":7.3194015322852e-05,"d":"7.32E-05"},1.30226367815157,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: alpha-1,4-glucosidase activity (GO:0004558);; Cellular Component: cytosol (GO:0005829);; Biological Process: starch metabolic process (GO:0005982);; Molecular Function: xylan 1,4-beta-xylosidase activity (GO:0009044);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: maltose alpha-glucosidase activity (GO:0032450);; Biological Process: xylan catabolic process (GO:0045493);; Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Molecular Function: xyloglucan 1,6-alpha-xylosidase activity (GO:0080176);; ","K15925|0|brp:103831266|K15925 alpha-D-xyloside xylohydrolase [EC:3.2.1.177] | (RefSeq) alpha-xylosidase 1","--","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolases family 31;; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase;; Galactose mutarotase-like","Alpha-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=XYL1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: alpha-xylosidase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576)"]
["Bra025911","Bra025911",11.103941,2913,17.553435,4803,17.443589,4369,9.371053,1800,3.351625,620,6.240303,1161,0.00018800217836193,-1.77246052630037,"down","[T]","Signal transduction mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: ER-nucleus signaling pathway (GO:0006984);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: meiosis I (GO:0007127);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: polysaccharide binding (GO:0030247);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: xylan metabolic process (GO:0045491);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: root development (GO:0048364);; Biological Process: post-embryonic animal organ development (GO:0048569);; Biological Process: developmental growth (GO:0048589);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: chromosome organization (GO:0051276);; Biological Process: biological regulation (GO:0065007);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Wall-associated receptor kinase C-terminal;; Wall-associated receptor kinase galacturonan-binding","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3","T","Signal transduction mechanisms","BnaA06g12510D [Brassica napus]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414)"]
["Bra034069","Bra034069",5.392728,603,19.567626,1820,13.317674,1344,2.471793,194,4.03178,328,3.616274,275,{"v":1.78715870293628e-05,"d":"1.79E-05"},-2.22504533216088,"down","--","--","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: extracellular region (GO:0005576);; ","--","--","[M]","Cell wall/membrane/envelope biogenesis","Pectinacetylesterase","Pectin acetylesterase 5 OS=Arabidopsis thaliana OX=3702 GN=PAE5 PE=2 SV=1","S","Function unknown","PREDICTED: pectin acetylesterase 5-like isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576)"]
["Bra016134","Bra016134",1.142143,117,0.720642,60,0.852618,58,3.39439,198,5.277914,304,5.063609,302,{"v":2.26392192204876e-05,"d":"2.26E-05"},1.71275047936556,"up","[PQ]","Inorganic ion transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","--","--","--","--","--","Rieske-like [2Fe-2S] domain;; Nuclear transport factor 2 (NTF2) domain;; SnoaL-like domain","--","C","Energy production and conversion","PREDICTED: uncharacterized protein LOC103831669 [Brassica rapa]","--"]
["Bra031030","Bra031030",5.773078,1190,9.687318,2208,10.100538,2122,4.027986,646,4.940418,771,4.429554,696,0.000177804047481913,-1.43683569037527,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","Transmembrane Fragile-X-F protein;; Zinc finger, C3HC4 type (RING finger)","Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KIN7D PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103842699 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra017421","Bra017421",44.231552,670,105.873367,1617,104.454498,1463,40.062584,429,13.916774,144,16.681019,173,{"v":8.1865981408431e-05,"d":"8.19E-05"},-2.29259769624795,"down","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; Biological Process: pattern specification process (GO:0007389);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: regulation of cell size (GO:0008361);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: negative regulation of peptidase activity (GO:0010466);; Biological Process: cysteine biosynthetic process (GO:0019344);; Molecular Function: peptidase inhibitor activity (GO:0030414);; Biological Process: killing of cells of other organism (GO:0031640);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","Gamma-thionin family","Defensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PDF2.3 PE=2 SV=1","S","Function unknown","PREDICTED: defensin-like protein 1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179);; molecular function: enzyme regulator activity (GO:0030234);; biological process: cell killing (GO:0001906);; biological process: multi-organism process (GO:0051704);; biological process: response to stimulus (GO:0050896)"]
["Bra031717","Bra031717",0.723316,47,0.649768,39,1.004644,40,21.886142,728,43.237924,1467,47.056337,1668,{"v":2.37600392900786e-32,"d":"2.38E-32"},4.74962886180649,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: water transport (GO:0006833);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; ","--","--","--","--","Domain of unknown function (DUF4228)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103843296 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896)"]
["Bra005632","Bra005632",132.669785,4762,117.598564,4260,100.095512,3324,45.480465,1155,52.482323,1283,41.065758,1010,{"v":3.07169552062678e-26,"d":"3.07E-26"},-1.86899798037794,"down","[JO]","Translation, ribosomal structure and biogenesis;; Posttranslational modification, protein turnover, chaperones","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: N-acetyltransferase activity (GO:0008080);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Acetyltransferase (GNAT) domain;; Acetyltransferase (GNAT) domain;; Acetyltransferase (GNAT) family;; Acetyltransferase (GNAT) domain","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103867686 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra011997","Bra011997",2.644602,214,1.213637,99,1.139137,86,5.405382,308,4.937384,271,5.65889,313,0.00515450391352217,1.12649550035593,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: system development (GO:0048731);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra004158","Bra004158",247.300587,20833,197.796614,17041,180.670485,14280,153.540934,9601,156.31972,8809,132.060436,8082,{"v":1.07968206553174e-12,"d":"1.08E-12"},-1.01172654776185,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: catalytic activity (GO:0003824);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: mRNA processing (GO:0006397);; Biological Process: response to stress (GO:0006950);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: RNA splicing (GO:0008380);; Biological Process: response to organic substance (GO:0010033);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K12881|9.13083e-111|brp:103831096|K12881 THO complex subunit 4 | (RefSeq) THO complex subunit 4C","RNA transport (ko03013);; mRNA surveillance pathway (ko03015);; Spliceosome (ko03040)","[A]","RNA processing and modification","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; C-terminal duplication domain of Friend of PRMT1","THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1","S","Function unknown","BnaCnng17870D [Brassica napus] ","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra016359","Bra016359",0.52449,60,1.002028,115,1.248885,132,0.050405,5,0,0,0,0,{"v":4.86785897920576e-07,"d":"4.87E-07"},-4.7916784150878,"down","[R]","General function prediction only","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: detection of fungus (GO:0016046);; Biological Process: benzoate metabolic process (GO:0018874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: positive regulation of plant-type hypersensitive response (GO:0034052);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: interspecies interaction between organisms (GO:0044419);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: 4-aminobenzoate amino acid synthetase activity (GO:0052625);; Molecular Function: benzoate amino acid synthetase activity (GO:0052626);; Molecular Function: vanillate amino acid synthetase activity (GO:0052627);; Molecular Function: 4-hydroxybenzoate amino acid synthetase activity (GO:0052628);; Biological Process: cellular response to hypoxia (GO:0071456);; ","K14487|0|brp:103835680|K14487 auxin responsive GH3 gene family | (RefSeq) 4-substituted benzoates-glutamate ligase GH3.12","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana OX=3702 GN=GH3.12 PE=1 SV=1","S","Function unknown","PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824)"]
["Bra022046","Bra022046",1.949231,187,5.60895,549,4.484554,407,1.124429,59,0.215858,18,0.447166,35,{"v":2.88225967356547e-07,"d":"2.88E-07"},-3.2081877652787,"down","--","--","Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: RNA methylation (GO:0001510);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: leaf senescence (GO:0010150);; Biological Process: formation of animal organ boundary (GO:0010160);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: positive regulation of cell fate commitment (GO:0010455);; Cellular Component: Cajal body (GO:0015030);; Cellular Component: membrane (GO:0016020);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: innate immune response (GO:0045087);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: carpel development (GO:0048440);; Biological Process: regulation of timing of animal organ formation (GO:0048504);; Biological Process: lateral root development (GO:0048527);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: root cap development (GO:0048829);; Biological Process: negative regulation of cell division (GO:0051782);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1","S","Function unknown","PREDICTED: NAC domain-containing protein 86-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: immune system process (GO:0002376)"]
["Bra029750","Bra029750",0.497913,32,0.30111,20,0.347124,21,1.071404,49,3.096738,134,3.340848,146,0.0010629535723309,2.00837751643071,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);; Biological Process: phytochromobilin biosynthetic process (GO:0010024);; Molecular Function: phytochromobilin:ferredoxin oxidoreductase activity (GO:0050619);; Molecular Function: cobalt ion binding (GO:0050897);; Biological Process: oxidation-reduction process (GO:0055114);; ","K08101|0|brp:103870559|K08101 phytochromobilin:ferredoxin oxidoreductase [EC:1.3.7.4] | (RefSeq) phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like","Porphyrin and chlorophyll metabolism (ko00860)","--","--","Ferredoxin-dependent bilin reductase","Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HY2 PE=2 SV=1","H","Coenzyme transport and metabolism","PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra019529","Bra019529",11.744867,187,7.575405,122,7.426272,110,23.221241,262,29.940273,325,29.314854,320,0.000199585776952135,1.07274137497375,"up","--","--","--","--","--","[L]","Replication, recombination and repair","--","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103873552 [Brassica rapa] ","--"]
["Bra024131","Bra024131",3.912672,348,8.55606,768,7.601829,625,0.077283,5,0.080843,5,0.191167,12,{"v":2.96690261969683e-26,"d":"2.97E-26"},-5.99126179136481,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: response to nitrate (GO:0010167);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: O-acetyltransferase activity (GO:0016413);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: xylan biosynthetic process (GO:0045492);; Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734);; Molecular Function: spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080072);; Molecular Function: sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080089);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","--","--","--","--","Transferase family","Spermidine coumaroyl-CoA acyltransferase OS=Arabidopsis thaliana OX=3702 GN=SCT PE=1 SV=1","S","Function unknown","PREDICTED: spermidine coumaroyl-CoA acyltransferase-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824)"]
["Bra029740","Bra029740",47.770039,3772,84.2369,6713,76.343132,5577,21.77352,1217,33.32011,1792,30.602255,1656,{"v":5.05558531812794e-07,"d":"5.06E-07"},-1.8192164683722,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: Golgi stack (GO:0005795);; Biological Process: protein targeting to membrane (GO:0006612);; Molecular Function: galactosyltransferase activity (GO:0008378);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: defense response to fungus (GO:0050832);; ","K01988|0|brp:103870568|K01988 lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228] | (RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like","Glycosphingolipid biosynthesis - globo series (ko00603)","[G]","Carbohydrate transport and metabolism","Alpha 1,4-glycosyltransferase conserved region;; Glycosyltransferase sugar-binding region containing DXD motif","Uncharacterized protein At4g19900 OS=Arabidopsis thaliana OX=3702 GN=At4g19900 PE=2 SV=1","S","Function unknown","PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704)"]
["Bra009031","Bra009031",2.769507,181,1.383188,86,1.406282,96,7.476819,331,4.981776,218,8.599998,358,0.00182020759862612,1.26759005737603,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: cell proliferation (GO:0008283);; Biological Process: response to sucrose (GO:0009744);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: xylem development (GO:0010089);; Biological Process: stomatal lineage progression (GO:0010440);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: negative regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0045736);; Biological Process: system development (GO:0048731);; Biological Process: regulation of cell cycle (GO:0051726);; ","K18810|0|brp:103846805|K18810 cyclin D1/2/4, plant | (RefSeq) cyclin-D4-2","--","[D]","Cell cycle control, cell division, chromosome partitioning","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Cyclin-D4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-2 PE=1 SV=2","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: cyclin-D4-2 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: enzyme regulator activity (GO:0030234)"]
["Bra015764","Bra015764",38.249232,2805,31.258189,2274,28.775611,1926,140.60587,6760,166.521997,8040,179.562227,8538,{"v":1.03375570648167e-21,"d":"1.03E-21"},1.69132699544838,"up","--","--","Biological Process: endonucleolytic cleavage involved in rRNA processing (GO:0000478);; Biological Process: RNA methylation (GO:0001510);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);; Biological Process: root development (GO:0048364);; Biological Process: leaf development (GO:0048366);; Biological Process: petal vascular tissue pattern formation (GO:0080056);; Biological Process: sepal vascular tissue pattern formation (GO:0080057);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","--","--","Nup53/35/40-type RNA recognition motif;; Nup53/35/40-type RNA recognition motif","Nucleolin 1 OS=Arabidopsis thaliana OX=3702 GN=NUCL1 PE=1 SV=1","--","--","PREDICTED: nucleolin 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Brassica_rapa_newGene_26332","--",5.243639,242,11.070373,514,11.424621,486,1.703917,56,0.741645,24,0.497956,16,{"v":4.11338234724467e-09,"d":"4.11E-09"},-3.54250927513066,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra021504","Bra021504",34.322201,1219,57.975792,2078,46.28878,1521,20.584053,518,21.607283,523,16.564497,403,{"v":9.81032272481268e-08,"d":"9.81E-08"},-1.77695341650692,"down","--","--","Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Biological Process: phosphatidylinositol biosynthetic process (GO:0006661);; Cellular Component: chloroplast (GO:0009507);; Biological Process: vesicle-mediated transport (GO:0016192);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: single-organism transport (GO:0044765);; Biological Process: intracellular transport (GO:0046907);; Biological Process: organic substance transport (GO:0071702);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","PRA1 family protein","PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: PRA1 family protein F3-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824)"]
["Bra040441","Bra040441",7.065346,530,6.730115,510,4.542324,315,17.473246,927,25.641635,1308,21.489208,1103,{"v":8.26407150573112e-06,"d":"8.26E-06"},1.25210128386931,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","[L]","Replication, recombination and repair","DDE superfamily endonuclease;; Plant transposon protein","Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1","S","Function unknown","PREDICTED: putative nuclease HARBI1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028508","Bra028508",27.30567,1848,58.164377,4079,65.982979,4061,4.506384,432,10.515392,480,5.109497,545,{"v":6.44896230942605e-11,"d":"6.45E-11"},-2.78097256683836,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103850232 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra003161","Bra003161",0.184153,24,0.602418,72,0.305964,34,2.397218,203,5.583345,448,5.206088,417,{"v":2.43829858479248e-06,"d":"2.44E-06"},2.78218413098465,"up","[E]","Amino acid transport and metabolism","Molecular Function: transporter activity (GO:0005215);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cation transport (GO:0006812);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to nematode (GO:0009624);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: pollen tube growth (GO:0009860);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Molecular Function: high-affinity oligopeptide transporter activity (GO:0015334);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: dipeptide transporter activity (GO:0042936);; Molecular Function: tripeptide transporter activity (GO:0042937);; Biological Process: dipeptide transport (GO:0042938);; Biological Process: tripeptide transport (GO:0042939);; Biological Process: response to leucine (GO:0043201);; Biological Process: intracellular transport (GO:0046907);; Biological Process: response to histidine (GO:0080052);; Biological Process: response to phenylalanine (GO:0080053);; ","--","--","[E]","Amino acid transport and metabolism","POT family","Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2","E","Amino acid transport and metabolism","PREDICTED: protein NRT1/ PTR FAMILY 5.7-like [Brassica rapa] ","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425)"]
["Bra014877","Bra014877",67.268661,5573,157.192322,13141,148.90416,11412,45.831135,2686,35.961094,2029,40.17601,2281,{"v":4.1604108100947e-07,"d":"4.16E-07"},-2.13478798191689,"down","[I]","Lipid transport and metabolism","--","--","--","[I]","Lipid transport and metabolism","Lipase (class 3)","Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06800 PE=1 SV=2","S","Function unknown","PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Brassica rapa]","--"]
["Bra031413","Bra031413",14.117873,1876,15.081795,2021,17.687552,2198,7.65477,704,10.803885,981,10.146703,916,{"v":1.9453113740784e-06,"d":"1.95E-06"},-1.27717873831288,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: porphyrin-containing compound biosynthetic process (GO:0006779);; Biological Process: signal transduction (GO:0007165);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: pigment biosynthetic process (GO:0046148);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: negative regulation of post-embryonic development (GO:0048581);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: root hair cell development (GO:0080147);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1","S","Function unknown","PREDICTED: transcription factor bHLH112 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra000310","Bra000310",100.61937,5525,53.555824,2968,57.955772,2944,58.825233,2285,44.393936,1660,46.960484,1767,0.00046009393454029,-1.00774931700416,"down","[R]","General function prediction only","Molecular Function: chitinase activity (GO:0004568);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: chitin catabolic process (GO:0006032);; Biological Process: defense response (GO:0006952);; Molecular Function: chitin binding (GO:0008061);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to UV-B (GO:0010224);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Cellular Component: extrinsic component of endoplasmic reticulum membrane (GO:0042406);; Molecular Function: chalcone isomerase activity (GO:0045430);; Cellular Component: apoplast (GO:0048046);; Biological Process: response to other organism (GO:0051707);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to karrikin (GO:0080167);; ","K01183|0|brp:103858078|K01183 chitinase [EC:3.2.1.14] | (RefSeq) endochitinase CHI","Amino sugar and nucleotide sugar metabolism (ko00520)","[R]","General function prediction only","Chitinase class I;; Chitin recognition protein","Endochitinase CHI OS=Arabidopsis thaliana OX=3702 GN=CHI PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: endochitinase CHI [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704)"]
["Bra018268","Bra018268",144.003593,4317,111.941183,3468,98.445087,2793,79.440111,1725,78.201923,1647,82.024388,1755,{"v":1.14324224521349e-12,"d":"1.14E-12"},-1.07490243148163,"down","--","--","--","K05765|1.99176e-106|brp:103867900|K05765 cofilin | (RefSeq) actin-depolymerizing factor 6","--","[Z]","Cytoskeleton","Cofilin/tropomyosin-type actin-binding protein","Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1","S","Function unknown","PREDICTED: actin-depolymerizing factor 6 [Brassica rapa]","--"]
["Bra002973","Bra002973",6.437129,250,3.323514,131,5.310326,191,13.980888,384,20.952139,554,18.927729,504,0.00020602454737601,1.27415970774681,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: large ribosomal subunit (GO:0015934);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: rRNA binding (GO:0019843);; Biological Process: plastid translation (GO:0032544);; ","K02895|4.06318e-124|brp:103844915|K02895 large subunit ribosomal protein L24 | (RefSeq) 50S ribosomal protein L24, chloroplastic","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal proteins 50S L24/mitochondrial 39S L24;; KOW motif","50S ribosomal protein L24, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL24 PE=2 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: 50S ribosomal protein L24, chloroplastic isoform X2 [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra027268","Bra027268",4.446524,308,3.447521,283,4.90879,316,0.912835,46,0.898115,49,0.977979,64,{"v":1.61748238920325e-16,"d":"1.62E-16"},-2.526130086979,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: root development (GO:0048364);; Biological Process: meristem development (GO:0048507);; Biological Process: negative regulation of biological process (GO:0048519);; ","--","--","--","--","bHLH-MYC and R2R3-MYB transcription factors N-terminal","Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RSS3 PE=1 SV=1","S","Function unknown","protein RICE SALT SENSITIVE 3-like [Brassica napus]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501)"]
["Bra026796","Bra026796",89.644914,4622,180.513111,10518,194.380119,9451,88.331545,2620,45.799192,1699,64.406975,1642,{"v":2.7498824997815e-06,"d":"2.75E-06"},-2.07085292774509,"down","--","--","Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: negative regulation of cell proliferation (GO:0008285);; Biological Process: pollen sperm cell differentiation (GO:0048235);; ","--","--","--","--","PLAC8 family","Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 SV=1","S","Function unknown","PREDICTED: protein PLANT CADMIUM RESISTANCE 2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra018858","Bra018858",4.68174,293,2.412825,144,1.756257,98,8.139328,358,9.641075,428,9.90776,413,0.00832468949708931,1.13493073514683,"up","[R]","General function prediction only","Biological Process: metabolic process (GO:0008152);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: carboxy-lyase activity (GO:0016831);; ","K06966|0|brp:103871337|K06966 uncharacterized protein | (RefSeq) uncharacterized LOC103871337","--","--","--","Possible lysine decarboxylase","Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana OX=3702 GN=LOG5 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103871337 [Brassica rapa]","biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824)"]
["Bra012687","Bra012687",15.425019,752,50.283836,2471,38.161945,1720,3.034824,105,0.546816,19,0.651449,22,{"v":6.36561829044578e-11,"d":"6.37E-11"},-4.67942203955463,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Cellular Component: membrane (GO:0016020);; Biological Process: sexual reproduction (GO:0019953);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-like B1 OS=Arabidopsis thaliana OX=3702 GN=EXLB1 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: expansin-like B1 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra033030","Bra033030",7.951558,399,17.173512,868,19.253675,892,9.951769,353,4.879756,167,6.217391,214,0.00242938675556958,-1.58534247012597,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to abiotic stimulus (GO:0009628);; ","--","--","--","--","Protein of unknown function (DUF1645)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103854211 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra009773","Bra009773",0.324753,20,0.453027,28,0.227263,13,1.971411,84,2.313444,95,1.342076,55,0.00116493398837858,1.79664658554847,"up","--","--","Cellular Component: chromatin (GO:0000785);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: copper ion transport (GO:0006825);; Biological Process: response to stress (GO:0006950);; Cellular Component: chloroplast (GO:0009507);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: specification of floral organ identity (GO:0010093);; Molecular Function: phosphatidylinositol-5-phosphate binding (GO:0010314);; Biological Process: gene silencing (GO:0016458);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: metal ion transport (GO:0030001);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: response to chemical (GO:0042221);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: histone H3-K4 methylation (GO:0051568);; ","--","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 9 OS=Arabidopsis thaliana OX=3702 GN=HIPP09 PE=2 SV=1","S","Function unknown","PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824)"]
["Bra010005","Bra010005",4.676031,425,5.338912,388,6.438407,456,14.391166,739,15.8639,987,21.703819,1024,0.000112928416622104,1.04500604810928,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein folding (GO:0006457);; Biological Process: iron ion transport (GO:0006826);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: nitric oxide mediated signal transduction (GO:0007263);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to heat (GO:0009408);; Biological Process: pollen development (GO:0009555);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: nitrate transport (GO:0015706);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain;; Plant zinc cluster domain","Probable WRKY transcription factor 74 OS=Arabidopsis thaliana OX=3702 GN=WRKY74 PE=2 SV=2","K","Transcription","PREDICTED: probable WRKY transcription factor 74 isoform X1 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra024336","Bra024336",296.74118,5239,552.999573,9853,514.340637,8401,128.97113,1611,75.237793,905,93.767052,1135,{"v":4.69289312838482e-12,"d":"4.69E-12"},-2.69905349705754,"down","--","--","Biological Process: defense response (GO:0006952);; Biological Process: cellular response to hypoxia (GO:0071456);; ","--","--","--","--","Family of unknown function (DUF5306)","Elicitor peptide 3 OS=Arabidopsis thaliana OX=3702 GN=PEP3 PE=3 SV=2","S","Function unknown","BnaA06g23840D [Brassica napus]","biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987)"]
["Bra004603","Bra004603",2.214551,164,5.242436,392,5.717385,407,0.471723,31,0.525266,33,0.22806,15,{"v":2.08172220212919e-09,"d":"2.08E-09"},-3.48169366309034,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: chloroplast (GO:0009507);; Biological Process: actin filament-based movement (GO:0030048);; ","--","--","--","--","F-box domain","F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN=At2g41170 PE=2 SV=1","S","Function unknown","PREDICTED: F-box protein At2g41170 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra014883","Bra014883",2.471237,92,1.944409,75,0.685006,24,7.016382,184,7.872021,201,10.064457,255,0.00200077321445003,1.65847184969898,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828805 isoform X1 [Brassica rapa] ","--"]
["Brassica_rapa_newGene_21311","--",0.116484,13,0.355288,38,0.214001,28,1.560204,120,1.227811,91,1.209949,84,0.00530460604024744,1.6976290421541,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra040598","Bra040598",43.560086,4449,51.364396,5256,63.143767,6004,37.224027,2700,27.917545,1945,28.992881,2087,{"v":8.23658947086421e-06,"d":"8.24E-06"},-1.28167578603755,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to ozone (GO:0010193);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: hyperosmotic salinity response (GO:0042538);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Protein phosphatase 2C","Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana OX=3702 GN=PPC6-1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 33 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra041153","Bra041153",4.597693,190,4.268643,179,4.515801,173,1.744753,52,0.943846,27,1.440995,41,{"v":8.07616340283614e-09,"d":"8.08E-09"},-2.17544579123997,"down","--","--","Biological Process: cell plate assembly (GO:0000919);; Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: kinesin complex (GO:0005871);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);; Biological Process: male meiosis cytokinesis (GO:0007112);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: cell proliferation (GO:0008283);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: pollen development (GO:0009555);; Biological Process: embryo sac cellularization (GO:0009558);; Biological Process: radial microtubular system formation (GO:0010245);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: histone phosphorylation (GO:0016572);; Cellular Component: intracellular organelle (GO:0043229);; ","K11498|3.90519e-154|brp:103849704|K11498 centromeric protein E | (RefSeq) kinesin-like protein KIN-7H","--","[Z]","Cytoskeleton","Domain of unknown function (DUF3490)","Kinesin-like protein KIN-7H OS=Arabidopsis thaliana OX=3702 GN=KIN7H PE=2 SV=1","Z","Cytoskeleton","PREDICTED: kinesin-like protein KIN-7H [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra025828","Bra025828",2.200656,161,2.415924,109,2.741485,149,7.439953,310,8.463564,410,7.963486,256,0.00100263697731399,1.14780964390979,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: dolichyl-phosphate beta-D-mannosyltransferase activity (GO:0004582);; Molecular Function: elongation factor-2 kinase activity (GO:0004686);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein glycosylation (GO:0006486);; Biological Process: cellulose biosynthetic process (GO:0030244);; Cellular Component: dolichol-phosphate-mannose synthase complex (GO:0033185);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: response to ammonium ion (GO:0060359);; ","K00721|2.24939e-110|eus:EUTSA_v10008599mg|K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] | (RefSeq) hypothetical protein","N-Glycan biosynthesis (ko00510)","[R]","General function prediction only","Glycosyl transferase family 2;; Glycosyltransferase like family 2","Dolichol-phosphate mannosyltransferase subunit 1 OS=Arabidopsis thaliana OX=3702 GN=DPMS1 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","dolichol-phosphate mannosyltransferase subunit 1 [Eutrema salsugineum] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896)"]
["Bra000660","Bra000660",197.143936,12048,196.815903,12138,222.576843,12584,52.894817,2287,10.194819,425,15.92048,667,{"v":2.08196182264861e-08,"d":"2.08E-08"},-3.29730497317557,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: sterol biosynthetic process (GO:0016126);; ","--","--","--","--","Phosphate-induced protein 1 conserved region","Protein EXORDIUM OS=Arabidopsis thaliana OX=3702 GN=EXO PE=2 SV=1","S","Function unknown","PREDICTED: protein EXORDIUM [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)"]
["Bra008077","Bra008077",2.692583,361,2.180122,299,2.216284,313,7.570842,736,7.741614,729,7.026676,655,{"v":4.74476552148876e-10,"d":"4.74E-10"},1.06937138508111,"up","[D]","Cell cycle control, cell division, chromosome partitioning","Molecular Function: ATP-dependent peptidase activity (GO:0004176);; Molecular Function: serine-type endopeptidase activity (GO:0004252);; Molecular Function: ATP binding (GO:0005524);; Biological Process: proteolysis (GO:0006508);; Cellular Component: chloroplast (GO:0009507);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","--","--","ATPase family associated with various cellular activities (AAA);; NTPase;; AAA domain (dynein-related subfamily)","Uncharacterized protein ycf45 OS=Porphyra purpurea OX=2787 GN=ycf45 PE=3 SV=1","S","Function unknown","PREDICTED: uncharacterized protein ycf45 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra015966","Bra015966",11.041319,210,13.851323,266,14.526316,256,4.757162,64,1.403755,19,0.328807,5,0.000470057688087238,-2.77780519169543,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: proteolysis (GO:0006508);; Biological Process: lipid transport (GO:0006869);; Molecular Function: peptidase activity (GO:0008233);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","--","Probable lipid transfer","Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1","S","Function unknown","PREDICTED: non-specific lipid-transfer protein 2 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra020341","Bra020341",9.612448,284,9.8834,295,8.546563,234,26.849098,561,27.568935,554,28.662273,580,{"v":9.99893558917191e-08,"d":"1.00E-07"},1.00520946896238,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","Mitochondrial 28S ribosomal protein S34","--","S","Function unknown","PREDICTED: uncharacterized protein LOC106324959 [Brassica oleracea var. oleracea] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra023085","Bra023085",12.844217,812,14.036695,902,12.29434,727,44.304401,1913,49.071848,2003,55.657115,2411,{"v":3.96640346261713e-10,"d":"3.97E-10"},1.31140385031747,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|1.98927e-174|brp:103857643|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor RAX2-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor RAX2-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra022315","Bra022315",40.138172,6343,37.872936,5929,40.791065,5918,26.107515,2971,20.820462,2302,20.614075,2220,{"v":1.76864430134383e-12,"d":"1.77E-12"},-1.32768117075703,"down","--","--","Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: cellular process (GO:0009987);; Cellular Component: cell part (GO:0044464);; ","--","--","[R]","General function prediction only","C2 domain","C2 domain-containing protein At1g53590 OS=Arabidopsis thaliana OX=3702 GN=NTMC2T6.1 PE=1 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103869573 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)"]
["Bra003366","Bra003366",1.921671,411,1.635421,319,1.055804,282,3.215393,741,7.097162,1086,5.274033,1204,{"v":7.18327866473147e-08,"d":"7.18E-08"},1.52783063920169,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: membrane (GO:0016020);; Molecular Function: lyase activity (GO:0016829);; Molecular Function: carbohydrate binding (GO:0030246);; ","K18195|0|brp:103831399|K18195 rhamnogalacturonan endolyase [EC:4.2.2.23] | (RefSeq) rhamnogalacturonate lyase-like","--","--","--","Rhamnogalacturonate lyase family;; Polysaccharide lyase family 4, domain III;; Polysaccharide lyase family 4, domain II","F-box/LRR-repeat protein At3g59210 OS=Arabidopsis thaliana OX=3702 GN=At3g59210 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103831399 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra040854","Bra040854",10.536387,1446,20.791183,2890,20.652526,2615,6.978396,672,2.693878,259,2.21764,205,{"v":3.75985157089911e-06,"d":"3.76E-06"},-2.56536770526959,"down","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: transport (GO:0006810);; Biological Process: response to stress (GO:0006950);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: multicellular organismal process (GO:0032501);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: macromolecular complex subunit organization (GO:0043933);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: multi-organism process (GO:0051704);; Biological Process: cellular response to metal ion (GO:0071248);; Molecular Function: phosphatidylinositol phosphate binding (GO:1901981);; ","--","--","[I]","Lipid transport and metabolism","CRAL/TRIO domain;; CRAL/TRIO, N-terminal domain","Patellin-2 OS=Arabidopsis thaliana OX=3702 GN=PATL2 PE=1 SV=2","S","Function unknown","PREDICTED: patellin-2 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)"]
["Bra031128","Bra031128",21.529314,310,12.74437,185,18.94038,252,6.179982,63,1.428535,14,2.786948,28,{"v":6.13519317194391e-06,"d":"6.14E-06"},-2.69952964865727,"down","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103842595 [Brassica rapa]","--"]
["Bra016362","Bra016362",2.988681,103,9.474349,415,8.451874,266,0,0,0,0,0,0,{"v":1.90135321555005e-16,"d":"1.90E-16"},-7.76045662930823,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: defense response (GO:0006952);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to biotic stimulus (GO:0009607);; ","--","--","--","--","Pathogenesis-related protein Bet v I family;; Polyketide cyclase / dehydrase and lipid transport","MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2","--","--","PREDICTED: MLP-like protein 31 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra032981","Bra032981",38.794692,2207,35.450536,2028,29.48728,1629,106.943697,4243,113.302646,4460,102.589577,4014,{"v":4.55997262619648e-15,"d":"4.56E-15"},1.07089954082318,"up","--","--","--","--","--","--","--","Development and cell death domain","B2 protein OS=Daucus carota OX=4039 PE=2 SV=1","S","Function unknown","PREDICTED: B2 protein-like [Brassica rapa]","--"]
["Bra026565","Bra026565",13.396411,2122,31.143818,5008,28.84762,4249,12.398958,1404,4.885431,540,4.087846,436,0.000107176487820529,-2.22579155718801,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphate ion transport (GO:0006817);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: endosperm development (GO:0009960);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: positive regulation of cell size (GO:0045793);; Biological Process: regulation of seed growth (GO:0080113);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","EXS family;; SPX domain","Phosphate transporter PHO1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=PHO1-H5 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: phosphate transporter PHO1 homolog 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra006442","Bra006442",8.430074,651,16.642876,1310,16.901365,1204,5.66822,309,2.710633,148,2.330484,121,{"v":2.30448352598754e-06,"d":"2.30E-06"},-2.43238351637727,"down","--","--","Biological Process: response to chitin (GO:0010200);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103856286 [Brassica rapa] ","biological process: response to stimulus (GO:0050896)"]
["Bra029933","Bra029933",67.319168,4579,26.487628,1821,26.777084,1697,267.260778,12893,551.594721,25591,569.21511,26622,{"v":9.38469620156996e-11,"d":"9.38E-11"},2.91052008388211,"up","--","--","Biological Process: defense response to nematode (GO:0002215);; Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: flower development (GO:0009908);; Molecular Function: heme binding (GO:0020037);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: negative regulation of growth (GO:0045926);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00430|0|brp:103875079|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 34","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 34 OS=Arabidopsis thaliana OX=3702 GN=PER34 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 34 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra007581","Bra007581",80.60482,2940,209.158081,7699,215.105682,7258,48.297619,1247,15.365447,382,16.600624,415,{"v":4.62313678269639e-07,"d":"4.62E-07"},-3.03176724180329,"down","--","--","Molecular Function: protein binding (GO:0005515);; Molecular Function: phospholipid binding (GO:0005543);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to cold (GO:0009409);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular homeostasis (GO:0019725);; Biological Process: negative regulation of defense response (GO:0031348);; ","--","--","--","--","C2 domain","BON1-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=BAP1 PE=1 SV=1","S","Function unknown","PREDICTED: BON1-associated protein 1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007)"]
["Bra035302","Bra035302",0.019602,5,0.093107,20,0.010645,3,1.017737,107,0.473251,67,0.501148,46,0.00267725513267818,2.53030957539477,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Biological Process: phragmoplast assembly (GO:0000914);; Biological Process: cell plate assembly (GO:0000919);; Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule associated complex (GO:0005875);; Biological Process: DNA replication (GO:0006260);; Biological Process: membrane fusion (GO:0006944);; Biological Process: microtubule-based movement (GO:0007018);; Biological Process: male meiosis cytokinesis (GO:0007112);; Molecular Function: cytoskeletal protein binding (GO:0008092);; Biological Process: cell proliferation (GO:0008283);; Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: embryo sac cellularization (GO:0009558);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: flower development (GO:0009908);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: radial microtubular system formation (GO:0010245);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Biological Process: histone phosphorylation (GO:0016572);; Cellular Component: motile cilium (GO:0031514);; Cellular Component: protein complex (GO:0043234);; Cellular Component: cytoskeletal part (GO:0044430);; Biological Process: cilium organization (GO:0044782);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: microgametogenesis (GO:0055046);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: organelle assembly (GO:0070925);; Biological Process: phragmoplast microtubule organization (GO:0080175);; ","K11498|0|brp:103848550|K11498 centromeric protein E | (RefSeq) kinesin-like protein KIN-7J","--","[Z]","Cytoskeleton","Kinesin motor domain;; Domain of unknown function (DUF3490);; Microtubule binding","Kinesin-like protein KIN-7I OS=Arabidopsis thaliana OX=3702 GN=KIN7I PE=1 SV=1","Z","Cytoskeleton","PREDICTED: kinesin-like protein KIN-7J isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra008132","Bra008132",268.549683,17715,398.000366,26493,330.315918,20157,134.52829,6278,227.407089,10216,211.463287,9559,{"v":5.88857270103542e-05,"d":"5.89E-05"},-1.343516306318,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: flavonoid metabolic process (GO:0009812);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance (GO:0032260);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity (GO:0080066);; Molecular Function: 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity (GO:0080067);; Molecular Function: 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity (GO:0080068);; Molecular Function: 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (GO:0080069);; Molecular Function: 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity (GO:0080070);; Molecular Function: indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity (GO:0080071);; Molecular Function: brassinosteroid sulfotransferase activity (GO:0080118);; Molecular Function: hydroxyjasmonate sulfotransferase activity (GO:0080131);; Molecular Function: flavonoid sulfotransferase activity (GO:1990135);; ","K11821|0|brp:103852881|K11821 desulfoglucosinolate sulfotransferase A/B/C [EC:2.8.2.-] | (RefSeq) ST5a, ST5a-1; cytosolic sulfotransferase 16","Tryptophan metabolism (ko00380);; Glucosinolate biosynthesis (ko00966);; 2-Oxocarboxylic acid metabolism (ko01210)","[R]","General function prediction only","Sulfotransferase domain;; Sulfotransferase family","Cytosolic sulfotransferase 16 OS=Arabidopsis thaliana OX=3702 GN=SOT16 PE=1 SV=1","S","Function unknown","PREDICTED: cytosolic sulfotransferase 16 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: multi-organism process (GO:0051704);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824)"]
["Bra021071","Bra021071",3.424441,479,5.578967,872,4.097339,585,2.335195,323,2.548596,323,2.365318,308,0.00328049908910748,-1.06968796182178,"down","--","--","Biological Process: protein peptidyl-prolyl isomerization (GO:0000413);; Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein folding (GO:0006457);; Biological Process: response to oxidative stress (GO:0006979);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103833990 isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra021895","Bra021895",3.212148,106,2.130356,71,2.177116,67,1.280254,30,0.139199,4,0.69531,16,0.00541253981247316,-2.09698177206396,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: purine nucleobase transport (GO:0006863);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: guard cell differentiation (GO:0010052);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: xylem development (GO:0010089);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to chitin (GO:0010200);; Biological Process: floral organ abscission (GO:0010227);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: root development (GO:0048364);; Biological Process: regulation of cell wall pectin metabolic process (GO:1902066);; ","--","--","--","--","Dof domain, zinc finger","Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1","K","Transcription","PREDICTED: cyclic dof factor 4-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: metabolic process (GO:0008152)"]
["Bra006944","Bra006944",6.56182,100,21.755672,333,34.402912,482,1.423864,16,1.411609,15,0.981313,11,{"v":9.90367320151767e-10,"d":"9.90E-10"},-4.16838653481054,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra033464","Bra033464",1.785489,285,7.081137,1092,7.173405,970,1.357805,153,1.221471,133,0.913937,102,{"v":1.38503131742124e-05,"d":"1.39E-05"},-2.54607649569128,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to cold (GO:0009409);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: cellular response to zinc ion (GO:0071294);; ","--","--","--","--","Basic region leucine zipper;; bZIP transcription factor","Basic leucine zipper 24 OS=Arabidopsis thaliana OX=3702 GN=BZIP24 PE=1 SV=1","K","Transcription","PREDICTED: basic leucine zipper 24-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra013773","Bra013773",1.674061,217,3.637489,484,5.09052,626,2.069971,191,0.370427,26,0.760268,53,0.00623940135606288,-2.15776638409636,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: phosphoric diester hydrolase activity (GO:0008081);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to virus (GO:0009615);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to UV-B (GO:0010224);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cell differentiation (GO:0030154);; Biological Process: negative regulation of defense response (GO:0031348);; Cellular Component: cytoplasmic vesicle (GO:0031410);; Biological Process: regulation of anthocyanin biosynthetic process (GO:0031540);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: post-translational protein modification (GO:0043687);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Thaumatin family","Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1","S","Function unknown","BnaA01g13660D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Brassica_rapa_newGene_4380","--",2.569696,69,4.429443,120,5.575083,138,71.008904,1339,38.085773,692,40.071297,732,{"v":7.23099244106449e-10,"d":"7.23E-10"},2.86648300358451,"up","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC106334288 [Brassica oleracea var. oleracea] ","--"]
["Bra033901","Bra033901",275.356934,24574,470.696228,42391,431.959442,35662,227.00383,14332,313.231018,19037,292.84021,17909,0.00227749988578232,-1.05742218050816,"down","[P]","Inorganic ion transport and metabolism","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: sulfate assimilation (GO:0000103);; Biological Process: selenium compound metabolic process (GO:0001887);; Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to sucrose (GO:0009744);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: photorespiration (GO:0009853);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: cellular response to sulfate starvation (GO:0009970);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Cellular Component: heterotetrameric ADPG pyrophosphorylase complex (GO:0030931);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: protein trimerization (GO:0070206);; ","K13811|0|brp:103868958|K13811 3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25] | (RefSeq) ATP sulfurylase 1, chloroplastic-like","Purine metabolism (ko00230);; Monobactam biosynthesis (ko00261);; Selenocompound metabolism (ko00450);; Sulfur metabolism (ko00920)","[P]","Inorganic ion transport and metabolism","ATP-sulfurylase;; PUA-like domain","ATP sulfurylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APS1 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: ATP sulfurylase 1, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576)"]
["Bra002161","Bra002161",0.970114,128,0.564254,66,0.562652,70,2.090839,186,2.883988,242,2.003346,165,0.00449975761886521,1.11916764799397,"up","--","--","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: binding (GO:0005488);; Biological Process: cell growth (GO:0016049);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism transport (GO:0044765);; Biological Process: intracellular transport (GO:0046907);; Biological Process: organic substance transport (GO:0071702);; ","--","--","--","--","--","F-box/LRR-repeat protein At1g48400 OS=Arabidopsis thaliana OX=3702 GN=At1g48400 PE=2 SV=2","--","--","PREDICTED: F-box/LRR-repeat protein At1g48400-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: growth (GO:0040007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179)"]
["Bra032115","Bra032115",2.14658,355,1.003281,168,0.947781,145,3.961056,464,4.38884,495,4.37405,496,0.00334020027694543,1.09481339463984,"up","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: transmembrane receptor protein tyrosine kinase activity (GO:0004714);; Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: transmembrane signaling receptor activity (GO:0004888);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: defense response (GO:0006952);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Molecular Function: lipid binding (GO:0008289);; Biological Process: response to UV (GO:0009411);; Biological Process: pollen development (GO:0009555);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: regulation of hormone levels (GO:0010817);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism transport (GO:0044765);; Biological Process: external encapsulating structure organization (GO:0045229);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: leaf development (GO:0048366);; Biological Process: meristem development (GO:0048507);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: anther wall tapetum cell differentiation (GO:0048657);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: cellular response to alcohol (GO:0097306);; ","--","--","--","--","Leucine rich repeat;; Protein kinase domain;; Protein tyrosine kinase;; Leucine Rich repeats (2 copies);; Leucine Rich repeat;; Leucine Rich Repeat","Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana OX=3702 GN=At2g24230 PE=2 SV=1","S","Function unknown","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra030083","Bra030083",82.487591,5236,13.581531,863,17.945553,1067,13.062283,579,13.97185,612,14.193653,606,0.00444283189348472,-1.81190575090858,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: response to lipid (GO:0033993);; Biological Process: root development (GO:0048364);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Pollen proteins Ole e I like","Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1","S","Function unknown","PREDICTED: non-classical arabinogalactan protein 31-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: cellular process (GO:0009987)"]
["Bra009152","Bra009152",4.385379,512,2.910583,341,2.925819,315,12.798078,1051,10.923187,862,14.365344,1143,{"v":9.8326496573832e-09,"d":"9.83E-09"},1.34480967726025,"up","--","--","Molecular Function: Rho guanyl-nucleotide exchange factor activity (GO:0005089);; Cellular Component: nucleus (GO:0005634);; Biological Process: membrane fusion (GO:0006944);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: xylem development (GO:0010089);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; ","--","--","--","--","PRONE (Plant-specific Rop nucleotide exchanger)","Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF5 PE=2 SV=1","S","Function unknown","PREDICTED: rop guanine nucleotide exchange factor 5 isoform X1 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: guanyl-nucleotide exchange factor activity (GO:0005085);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152)"]
["Bra023492","Bra023492",1.935237,68,1.304653,46,0.902294,30,5.655631,140,8.406079,200,7.284348,175,{"v":1.42763089591593e-05,"d":"1.43E-05"},1.77038047129824,"up","--","--","Biological Process: pentose-phosphate shunt (GO:0006098);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: metal ion transport (GO:0030001);; Biological Process: protein targeting to chloroplast (GO:0045036);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","Heavy-metal-associated domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103850955 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra033946","Bra033946",16.475203,2405,17.562846,2651,16.806735,2398,9.215116,927,9.387959,870,10.752794,1002,{"v":4.95868367781489e-15,"d":"4.96E-15"},-1.4629403554449,"down","--","--","--","--","--","--","--","Protein of unknown function (DUF1639)","--","S","Function unknown","BnaA02g13750D [Brassica napus]","--"]
["Bra018061","Bra018061",3.195024,240,2.131977,173,2.078076,138,9.867212,505,7.791916,384,6.829483,350,0.000105864615594547,1.12239952766621,"up","[L]","Replication, recombination and repair","--","--","--","[L]","Replication, recombination and repair","Endonuclease/Exonuclease/phosphatase family","DNA-(apurinic or apyrimidinic site) lyase OS=Arabidopsis thaliana OX=3702 GN=APE1L PE=1 SV=1","L","Replication, recombination and repair","PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Brassica rapa]","--"]
["Bra004081","Bra004081",62.976108,11314,64.075968,11675,67.261296,11200,39.13554,4971,47.397848,5800,48.003285,5918,{"v":3.50086918092305e-09,"d":"3.50E-09"},-1.08500781835854,"down","--","--","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: sulfur amino acid metabolic process (GO:0000096);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: protein binding (GO:0005515);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to salt stress (GO:0009651);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: anther dehiscence (GO:0009901);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: lateral root formation (GO:0010311);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: linoleate 13S-lipoxygenase activity (GO:0016165);; Molecular Function: phytoene dehydrogenase activity (GO:0016166);; Biological Process: regulation of lipid metabolic process (GO:0019216);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: electron transport chain (GO:0022900);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Biological Process: lipid oxidation (GO:0034440);; Biological Process: growth (GO:0040007);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: response to herbivore (GO:0080027);; Biological Process: stamen filament development (GO:0080086);; Molecular Function: linoleate 9S-lipoxygenase activity (GO:1990136);; ","K00454|0|brp:103831021|K00454 lipoxygenase [EC:1.13.11.12] | (RefSeq) lipoxygenase 6, chloroplastic","Linoleic acid metabolism (ko00591);; alpha-Linolenic acid metabolism (ko00592)","--","--","Lipoxygenase;; PLAT/LH2 domain","Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX6 PE=2 SV=1","S","Function unknown","PREDICTED: lipoxygenase 6, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007)"]
["Bra012974","Bra012974",2.907749,321,7.475812,832,6.890345,701,1.89815,154,1.04544,82,0.638685,49,{"v":9.01924150873494e-06,"d":"9.02E-06"},-2.63115200692502,"down","--","--","Molecular Function: beta-glucuronidase activity (GO:0004566);; Cellular Component: extracellular region (GO:0005576);; Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: unidimensional cell growth (GO:0009826);; Cellular Component: membrane (GO:0016020);; Molecular Function: baicalin beta-D-glucuronidase activity (GO:0052748);; ","K07964|0|brp:103860580|K07964 heparanase [EC:3.2.1.166] | (RefSeq) heparanase-like protein 2","Glycosaminoglycan degradation (ko00531)","--","--","Glycosyl hydrolase family 79, N-terminal domain","Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: heparanase-like protein 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)"]
["Bra026945","Bra026945",1.633373,180,2.689924,347,2.371872,268,0.466501,40,0.636587,38,0.517936,47,{"v":1.95863265745498e-09,"d":"1.96E-09"},-2.65333522156802,"down","--","--","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: purine nucleobase transport (GO:0006863);; Molecular Function: GTP diphosphokinase activity (GO:0008728);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to nematode (GO:0009624);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: root hair cell differentiation (GO:0048765);; ","K03327|0|brp:103843092|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 31","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 31 OS=Arabidopsis thaliana OX=3702 GN=DTX31 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 31 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215)"]
["Bra032842","Bra032842",19.00806,1985,9.285899,979,8.519911,825,31.201374,2298,37.412398,2677,35.969071,2770,0.00304147913622732,1.00993468060375,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytosol (GO:0005829);; Biological Process: glycogen biosynthetic process (GO:0005978);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);; Cellular Component: amyloplast (GO:0009501);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to blue light (GO:0009637);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: photorespiration (GO:0009853);; Biological Process: chloroplast relocation (GO:0009902);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to red light (GO:0010114);; Cellular Component: glucose-1-phosphate adenylyltransferase complex (GO:0010170);; Biological Process: response to far red light (GO:0010218);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; ","K00975|0|brp:103839024|K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] | (RefSeq) glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","Nucleotidyl transferase","Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APL2 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic isoform X2 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; biological process: reproductive process (GO:0022414)"]
["Bra010622","Bra010622",1.260633,127,0.83385,92,1.018151,101,1.658497,128,8.600987,602,6.694266,480,0.00417130707431674,1.76532410868834,"up","[E]","Amino acid transport and metabolism","Molecular Function: glycine hydroxymethyltransferase activity (GO:0004372);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrial matrix (GO:0005759);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: L-serine metabolic process (GO:0006563);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: methyltransferase activity (GO:0008168);; Molecular Function: poly(U) RNA binding (GO:0008266);; Biological Process: response to cold (GO:0009409);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: photorespiration (GO:0009853);; Biological Process: polar nucleus fusion (GO:0010197);; Cellular Component: stromule (GO:0010319);; Biological Process: glycine decarboxylation via glycine cleavage system (GO:0019464);; Biological Process: photosynthesis, light reaction (GO:0019684);; Cellular Component: cytosolic ribosome (GO:0022626);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: methylation (GO:0032259);; Biological Process: tetrahydrofolate interconversion (GO:0035999);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; ","K00600|0|brp:103835059|K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] | (RefSeq) serine hydroxymethyltransferase 1, mitochondrial","Glycine, serine and threonine metabolism (ko00260);; Cyanoamino acid metabolism (ko00460);; Glyoxylate and dicarboxylate metabolism (ko00630);; One carbon pool by folate (ko00670);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Serine hydroxymethyltransferase","Serine hydroxymethyltransferase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SHM1 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: serine hydroxymethyltransferase 1, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; cellular component: extracellular region (GO:0005576)"]
["Bra011241","Bra011241",57.811134,11706,58.262227,7424,59.170243,6975,35.74061,4544,18.0901,2368,17.97286,2394,{"v":1.6176726310701e-05,"d":"1.62E-05"},-1.4893332928229,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Calmodulin binding protein-like","Calmodulin-binding protein 60 F OS=Arabidopsis thaliana OX=3702 GN=CBP60F PE=2 SV=1","S","Function unknown","PREDICTED: calmodulin-binding protein 60 F isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra035793","Bra035793",3.560052,316,2.86126,255,3.009673,262,0.735352,47,1.662954,100,0.914065,55,{"v":8.15137238779608e-07,"d":"8.15E-07"},-2.02566140182985,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: hyperosmotic salinity response (GO:0042538);; ","--","--","--","--","Protein of unknown function (DUF3537)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103869337 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra028968","Bra028968",3.08894,61,5.938814,118,8.985913,163,0.54591,8,0.363047,5,0.095108,2,{"v":1.75164236241122e-08,"d":"1.75E-08"},-4.13513084471237,"down","--","--","Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to nitric oxide (GO:0071732);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103856975 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra002470","Bra002470",2.278487,234,1.250183,122,1.178107,121,3.532659,249,7.582137,516,9.440144,747,0.00223515500935112,1.58123936104377,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","[A]","RNA processing and modification","RING-variant domain","Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103845473 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra007969","Bra007969",0.864547,112,1.238331,184,1.725947,181,0.13498,14,0.165645,18,0.102517,11,{"v":4.21039427543562e-11,"d":"4.21E-11"},-3.38342190803159,"down","--","--","Molecular Function: inositol-polyphosphate 5-phosphatase activity (GO:0004445);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to hormone (GO:0009725);; Biological Process: dephosphorylation (GO:0016311);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: inositol trisphosphate metabolic process (GO:0032957);; Molecular Function: phosphatidylinositol bisphosphate phosphatase activity (GO:0034593);; Molecular Function: phosphatidylinositol phosphate 5-phosphatase activity (GO:0034595);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: inositol phosphate dephosphorylation (GO:0046855);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Endonuclease/Exonuclease/phosphatase family","Type IV inositol polyphosphate 5-phosphatase 3 OS=Arabidopsis thaliana OX=3702 GN=IP5P3 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: type IV inositol polyphosphate 5-phosphatase 3-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502)"]
["Bra027326","Bra027326",3.023173,477,8.978785,1372,8.327197,1152,1.306299,111,0.48865,55,0.512106,58,{"v":1.88973101244234e-11,"d":"1.89E-11"},-3.64288770920938,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; Biological Process: cellular process (GO:0009987);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism process (GO:0044699);; ","--","--","[R]","General function prediction only","C2 domain","C2 domain-containing protein At1g53590 OS=Arabidopsis thaliana OX=3702 GN=NTMC2T6.1 PE=1 SV=2","S","Function unknown","PREDICTED: C2 domain-containing protein At1g53590 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra028438","Bra028438",7.704257,295,22.373472,863,23.07547,816,0.277384,8,0,0,0,0,{"v":1.38912929679508e-13,"d":"1.39E-13"},-6.57982297069301,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[T]","Signal transduction mechanisms","EF-hand domain;; EF-hand domain pair;; EF-hand domain pair;; EF hand","Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=1 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML45 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra023344","Bra023344",3.32343,451,3.900178,499,4.456476,487,2.173771,200,0.751608,76,1.017794,115,{"v":1.60507230867918e-05,"d":"1.61E-05"},-1.88385982685194,"down","[P]","Inorganic ion transport and metabolism","Biological Process: potassium ion transport (GO:0006813);; Biological Process: sodium ion transport (GO:0006814);; Biological Process: cellular process (GO:0009987);; Biological Process: lithium ion transport (GO:0010351);; Molecular Function: potassium:proton antiporter activity (GO:0015386);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: potassium ion transmembrane transport (GO:0071805);; ","--","--","[P]","Inorganic ion transport and metabolism","Sodium/hydrogen exchanger family","K(+) efflux antiporter 6 OS=Arabidopsis thaliana OX=3702 GN=KEA6 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: K(+) efflux antiporter 6-like [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028588","Bra028588",2.173109,289,1.536239,216,1.488375,187,0.791329,80,0.218005,22,0.087383,9,0.00138579758829479,-2.41499980629912,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: purine nucleobase transport (GO:0006863);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: fruit ripening (GO:0009835);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Biological Process: cadmium ion transport (GO:0015691);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: sequestering of metal ion (GO:0051238);; ","K03327|1.64891e-94|bna:106418005|K03327 multidrug resistance protein, MATE family | (RefSeq) protein TRANSPARENT TESTA 12-like","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 26 OS=Arabidopsis thaliana OX=3702 GN=DTX26 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein TRANSPARENT TESTA 12-like [Brassica oleracea var. oleracea] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: reproduction (GO:0000003);; biological process: multicellular organismal process (GO:0032501);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007)"]
["Bra040313","Bra040313",5.937546,483,8.262897,724,9.733543,721,6.360318,393,2.520319,162,2.091902,157,0.00417888452806395,-1.46064061941428,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: ARF guanyl-nucleotide exchange factor activity (GO:0005086);; Molecular Function: protein binding (GO:0005515);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: early endosome (GO:0005769);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Biological Process: tRNA modification (GO:0006400);; Biological Process: steroid biosynthetic process (GO:0006694);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: tissue development (GO:0009888);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to metal ion (GO:0010038);; Biological Process: regulation of brassinosteroid biosynthetic process (GO:0010422);; Biological Process: positive regulation of organelle organization (GO:0010638);; Cellular Component: membrane (GO:0016020);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: carotenoid metabolic process (GO:0016116);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: vesicle-mediated transport (GO:0016192);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cytosolic transport (GO:0016482);; Biological Process: histone methylation (GO:0016571);; Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: growth (GO:0040007);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: DNA binding (GO:0043566);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: innate immune response (GO:0045087);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: seed development (GO:0048316);; Biological Process: leaf development (GO:0048366);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: negative regulation of biological process (GO:0048519);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: regulation of catalytic activity (GO:0050790);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: organic substance transport (GO:0071702);; Cellular Component: cell periphery (GO:0071944);; Biological Process: sporopollenin biosynthetic process (GO:0080110);; Biological Process: 5-carbamoylmethyl uridine residue modification (GO:0080178);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[V]","Defense mechanisms","NAD dependent epimerase/dehydratase family;; GDP-mannose 4,6 dehydratase;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; Male sterility protein;; NAD(P)H-binding;; NmrA-like family;; Polysaccharide biosynthesis protein","Protein BRI1-5 ENHANCED 1 OS=Arabidopsis thaliana OX=3702 GN=BEN1 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: protein BRI1-5 ENHANCED 1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: guanyl-nucleotide exchange factor activity (GO:0005085);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra039974","Bra039974",2.760327,159,6.81298,384,7.629891,389,0.167827,7,0,0,0,0,{"v":1.14710385460714e-10,"d":"1.15E-10"},-5.82725299312138,"down","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: nucleotide binding (GO:0000166);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: iron ion transport (GO:0006826);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to karrikin (GO:0080167);; ","K08081|2.33518e-175|brp:103864962|K08081 tropinone reductase I [EC:1.1.1.206] | (RefSeq) tropinone reductase homolog At2g30670-like","Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)","[R]","General function prediction only","Enoyl-(Acyl carrier protein) reductase;; short chain dehydrogenase;; KR domain","Tropinone reductase homolog At2g30670 OS=Arabidopsis thaliana OX=3702 GN=At2g30670 PE=3 SV=1","S","Function unknown","PREDICTED: tropinone reductase homolog At2g30670-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra008313","Bra008313",5.800913,437,10.712577,834,11.228536,795,0.902437,48,0.322449,20,0,0,{"v":1.43491271899717e-05,"d":"1.43E-05"},-4.09671445652631,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: O-methyltransferase activity (GO:0008171);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: luteolin O-methyltransferase activity (GO:0030744);; Molecular Function: quercetin 3-O-methyltransferase activity (GO:0030755);; Biological Process: methylation (GO:0032259);; Molecular Function: myricetin 3'-O-methyltransferase activity (GO:0033799);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: caffeate O-methyltransferase activity (GO:0047763);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","K13066|0|brp:103853080|K13066 caffeic acid 3-O-methyltransferase [EC:2.1.1.68] | (RefSeq) indole glucosinolate O-methyltransferase 1-like","Phenylpropanoid biosynthesis (ko00940)","[R]","General function prediction only","O-methyltransferase;; Dimerisation domain","Indole glucosinolate O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=IGMT1 PE=1 SV=1","S","Function unknown","PREDICTED: indole glucosinolate O-methyltransferase 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra031896","Bra031896",124.854362,11385,329.203125,30293,326.612274,27551,166.143906,10718,103.088257,6402,98.62294,6163,0.00130355052481208,-1.60812764356418,"down","[S]","Function unknown","Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: caveola (GO:0005901);; Biological Process: endocytosis (GO:0006897);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: nodulation (GO:0009877);; Biological Process: response to chitin (GO:0010200);; Biological Process: membrane invagination (GO:0010324);; Cellular Component: apical plasma membrane (GO:0016324);; Biological Process: root development (GO:0048364);; Biological Process: induction of tumor, nodule, or growth in other organism involved in symbiotic interaction (GO:0051819);; Biological Process: cellular response to hypoxia (GO:0071456);; ","K07192|0|brp:103855264|K07192 flotillin | (RefSeq) flotillin-like protein 3","--","[UZ]","Intracellular trafficking, secretion, and vesicular transport;; Cytoskeleton","SPFH domain / Band 7 family","Flotillin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FLOT3 PE=2 SV=1","S","Function unknown","BnaA02g34440D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra022245","Bra022245",65.010412,5456,62.439389,5194,61.503678,4706,49.437681,2875,46.315638,2595,42.843817,2423,{"v":1.8846840638019e-13,"d":"1.88E-13"},-1.00822754848141,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to UV-B (GO:0010224);; ","--","--","--","--","Protein of unknown function (DUF760)","UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g17800 PE=2 SV=1","S","Function unknown","PREDICTED: UV-B-induced protein At3g17800, chloroplastic [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra004553","Bra004553",2.688159,596,2.483925,484,2.414514,481,6.671238,1029,8.884121,1293,9.1852,1401,{"v":2.01613748323436e-08,"d":"2.02E-08"},1.20156922467341,"up","--","--","Molecular Function: calmodulin binding (GO:0005516);; Biological Process: protein folding (GO:0006457);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: heat acclimation (GO:0010286);; Biological Process: induction of programmed cell death (GO:0012502);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Cellular Component: cell part (GO:0044464);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","BAG domain","BAG family molecular chaperone regulator 6 OS=Arabidopsis thaliana OX=3702 GN=BAG6 PE=1 SV=1","S","Function unknown","PREDICTED: BAG family molecular chaperone regulator 6 isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704)"]
["Bra016460","Bra016460",5.204155,544,4.036854,411,4.034261,394,18.67431,1325,13.295959,881,11.670159,888,{"v":8.30651815605014e-06,"d":"8.31E-06"},1.14250440361479,"up","--","--","--","K05868|0|brp:103835789|K05868 cyclin B | (RefSeq) cyclin-B2-3-like","--","[D]","Cell cycle control, cell division, chromosome partitioning","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Cyclin-B2-3 OS=Arabidopsis thaliana OX=3702 GN=CYCB2-3 PE=2 SV=2","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: cyclin-B2-3-like [Brassica rapa]","--"]
["Bra033844","Bra033844",0.338603,53,0.34769,43,0.238975,23,1.64786,187,1.369685,128,3.48034,211,{"v":3.41188311961455e-06,"d":"3.41E-06"},2.04961400301791,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: rRNA processing (GO:0006364);; Biological Process: regulation of translation (GO:0006417);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: regulation of root meristem growth (GO:0010082);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: leaf senescence (GO:0010150);; Biological Process: abaxial cell fate specification (GO:0010158);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Biological Process: regulation of anthocyanin metabolic process (GO:0031537);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: transcription from plastid promoter (GO:0042793);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: plant ovule development (GO:0048481);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: primary root development (GO:0080022);; Biological Process: integument development (GO:0080060);; Biological Process: regulation of seed growth (GO:0080113);; ","--","--","--","--","Myb-like DNA-binding domain","Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1","K","Transcription","PREDICTED: probable transcription factor KAN2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003)"]
["Bra020180","Bra020180",21.870729,378,54.835217,956,58.626255,937,19.731028,242,24.994129,294,22.986639,272,0.00213276129667865,-1.52654499770181,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103851430 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra019966","Bra019966",4.834137,424,5.378771,476,2.947862,240,2.754011,171,2.427929,145,1.800576,109,0.000145162001762138,-1.42667449302544,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Protein of unknown function (DUF1005)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871783 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra006599","Bra006599",49.262638,2036,43.984119,1835,34.921314,1335,32.621952,954,16.473005,464,15.012694,426,0.0001115432468289,-1.50200872264358,"down","--","--","Biological Process: defense response to insect (GO:0002213);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plastid (GO:0009536);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: response to chitin (GO:0010200);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: single-organism cellular process (GO:0044763);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana OX=3702 GN=ERF016 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF016-like [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)"]
["Bra023027","Bra023027",4.797502,212,7.747255,328,6.840373,287,3.746979,145,3.166277,97,4.112707,131,0.00240381169531769,-1.19489452323858,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: chlorophyll catabolic process (GO:0015996);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Domain of unknown function (DUF588)","CASP-like protein 2B1 OS=Eutrema halophilum OX=98038 PE=2 SV=1","S","Function unknown","PREDICTED: CASP-like protein 2B1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425)"]
["Bra036694","Bra036694",0.310306,23,0.713894,32,0.342867,22,4.949113,199,2.036552,93,1.904955,91,{"v":9.51457431748866e-05,"d":"9.51E-05"},2.13436229456565,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: leaf development (GO:0048366);; ","--","--","--","--","--","Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1","S","Function unknown","PREDICTED: protein SPEAR1-like isoform X2 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra026944","Bra026944",8.887806,852,6.572481,631,4.522736,394,19.186534,1270,22.10722,1423,21.891505,1416,0.000102426624261115,1.09840783617205,"up","[K]","Transcription","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: defense response (GO:0006952);; Biological Process: epidermis development (GO:0008544);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: embryo development (GO:0009790);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: flower development (GO:0009908);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of growth (GO:0040008);; Cellular Component: cell projection (GO:0042995);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism transport (GO:0044765);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: leaf development (GO:0048366);; Biological Process: post-embryonic animal organ development (GO:0048569);; Biological Process: developmental growth (GO:0048589);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: cell division (GO:0051301);; Biological Process: cell wall organization (GO:0071555);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Plant intracellular Ras-group-related LRR protein 3 OS=Arabidopsis thaliana OX=3702 GN=PIRL3 PE=2 SV=1","S","Function unknown","PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane (GO:0016020);; biological process: growth (GO:0040007);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra037347","Bra037347",125.316686,26158,90.323141,20294,92.570438,18281,81.721662,12895,59.109078,9158,67.094419,9702,{"v":9.03664546164083e-08,"d":"9.04E-08"},-1.06031567483752,"down","[C]","Energy production and conversion","Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0004471);; Molecular Function: malate dehydrogenase (decarboxylating) (NADP+) activity (GO:0004473);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrial matrix (GO:0005759);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: malate metabolic process (GO:0006108);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: oxaloacetate decarboxylase activity (GO:0008948);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0016619);; Molecular Function: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor (GO:0016652);; Biological Process: multicellular organismal process (GO:0032501);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: regulation of biological process (GO:0050789);; Molecular Function: cobalt ion binding (GO:0050897);; Molecular Function: NAD binding (GO:0051287);; Biological Process: protein homotetramerization (GO:0051289);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K00028|0|brp:103836911|K00028 malate dehydrogenase (decarboxylating) [EC:1.1.1.39] | (RefSeq) NAD-dependent malic enzyme 2, mitochondrial","Pyruvate metabolism (ko00620);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)","[C]","Energy production and conversion","Malic enzyme, NAD binding domain;; Malic enzyme, N-terminal domain","NAD-dependent malic enzyme 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NAD-ME2 PE=1 SV=1","C","Energy production and conversion","PREDICTED: NAD-dependent malic enzyme 2, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; cellular component: extracellular region (GO:0005576);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007)"]
["Bra038805","Bra038805",2.774696,257,2.484073,232,1.532332,131,6.525681,427,9.775035,615,7.456323,472,0.000257160663525714,1.23906795182153,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Molecular Function: translation elongation factor activity (GO:0003746);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: protein binding (GO:0005515);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosol (GO:0005829);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: translational elongation (GO:0006414);; Cellular Component: nucleoid (GO:0009295);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: cyanelle (GO:0009842);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cuticle development (GO:0042335);; Cellular Component: apoplast (GO:0048046);; ","K02358|0|brp:103861196|K02358 elongation factor Tu | (RefSeq) elongation factor Tu, chloroplastic-like","--","[J]","Translation, ribosomal structure and biogenesis","Elongation factor Tu GTP binding domain;; Elongation factor Tu C-terminal domain;; Elongation factor Tu domain 2;; 50S ribosome-binding GTPase","Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TUFA PE=1 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: elongation factor Tu, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: nucleoid (GO:0009295);; cellular component: membrane (GO:0016020);; biological process: developmental process (GO:0032502);; cellular component: extracellular region (GO:0005576)"]
["Bra009033","Bra009033",8.511676,1124,11.44358,1648,11.031238,1464,6.595673,666,3.793484,374,4.792277,473,{"v":1.72893703572735e-05,"d":"1.73E-05"},-1.52968754908905,"down","--","--","Molecular Function: transporter activity (GO:0005215);; Biological Process: purine nucleobase transport (GO:0006863);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Cellular Component: membrane (GO:0016020);; Biological Process: single-organism process (GO:0044699);; ","K03327|4.41068e-80|bna:106372472|K03327 multidrug resistance protein, MATE family | (RefSeq) protein TRANSPARENT TESTA 12-like","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 26 OS=Arabidopsis thaliana OX=3702 GN=DTX26 PE=2 SV=1","S","Function unknown","protein DETOXIFICATION 28 [Brassica napus]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra015490","Bra015490",2.12245,196,1.527892,164,0.866682,80,6.796007,441,5.129645,344,5.938232,380,0.000279535989941343,1.35341523454965,"up","--","--","Cellular Component: plant-type vacuole (GO:0000325);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytosol (GO:0005829);; Biological Process: proteolysis (GO:0006508);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; Biological Process: catabolic process (GO:0009056);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: programmed cell death involved in cell development (GO:0010623);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Cellular Component: nuclear part (GO:0044428);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: xylan biosynthetic process (GO:0045492);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","K16290|1.06705e-38|bna:106416269|K16290 xylem cysteine proteinase [EC:3.4.22.-] | (RefSeq) xylem cysteine proteinase 2","--","[O]","Posttranslational modification, protein turnover, chaperones","Papain family cysteine protease","Cysteine protease XCP2 OS=Arabidopsis thaliana OX=3702 GN=XCP2 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","cysteine protease XCP2 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: extracellular region (GO:0005576);; biological process: multi-organism process (GO:0051704)"]
["Bra013936","Bra013936",1.20567,220,1.452569,315,1.112422,245,0.545624,70,0.099341,17,0.347768,57,{"v":5.41442621057623e-05,"d":"5.41E-05"},-2.36006475258762,"down","[V]","Defense mechanisms","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: response to superoxide (GO:0000303);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: cell adhesion (GO:0007155);; Biological Process: regulation of cell size (GO:0008361);; Molecular Function: xenobiotic-transporting ATPase activity (GO:0008559);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to blue light (GO:0009637);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: cell tip growth (GO:0009932);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: vernalization response (GO:0010048);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: formation of animal organ boundary (GO:0010160);; Biological Process: response to far red light (GO:0010218);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: auxin efflux (GO:0010315);; Molecular Function: auxin influx transmembrane transporter activity (GO:0010328);; Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: acropetal auxin transport (GO:0010541);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: amino acid import (GO:0043090);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: actin nucleation (GO:0045010);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: carpel development (GO:0048440);; Biological Process: stamen development (GO:0048443);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair elongation (GO:0048767);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: auxin influx (GO:0060919);; Biological Process: cell wall organization (GO:0071555);; ","K05658|0|brp:103863726|K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44] | (RefSeq) ABC transporter B family member 2","ABC transporters (ko02010)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter transmembrane region;; ABC transporter;; RecF/RecN/SMC N terminal domain;; Zeta toxin;; AAA ATPase domain;; Predicted ATPase of the ABC class;; P-loop containing region of AAA domain;; ATPase family associated with various cellular activities (AAA)","ABC transporter B family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCB2 PE=1 SV=3","V","Defense mechanisms","PREDICTED: ABC transporter B family member 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: biological adhesion (GO:0022610);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425)"]
["Bra039063","Bra039063",0.220905,44,0.081605,17,0.179708,33,1.69669,237,1.351268,182,1.246038,169,{"v":1.92678630917868e-08,"d":"1.93E-08"},2.51591720928963,"up","[K]","Transcription","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: defense response (GO:0006952);; Biological Process: organelle organization (GO:0006996);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: pattern specification process (GO:0007389);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to hormone (GO:0009725);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: seed maturation (GO:0010431);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: stamen development (GO:0048443);; Biological Process: developmental growth (GO:0048589);; Biological Process: localization (GO:0051179);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","--","--","Leucine rich repeat;; Protein kinase domain;; Protein tyrosine kinase;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine Rich repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana OX=3702 GN=At3g28040 PE=2 SV=1","S","Function unknown","PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: reproduction (GO:0000003);; cellular component: membrane part (GO:0044425);; cellular component: organelle (GO:0043226);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179)"]
["Bra010997","Bra010997",2.484752,306,1.703539,210,1.943109,208,7.094188,623,7.300233,602,6.732711,572,{"v":9.04837132409358e-11,"d":"9.05E-11"},1.26718030093187,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","[I]","Lipid transport and metabolism","Plasma-membrane choline transporter","--","S","Function unknown","PREDICTED: CTL-like protein DDB_G0274487 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane part (GO:0044425)"]
["Bra026624","Bra026624",0.200414,18,0.068769,6,0.141787,12,2.773,168,2.454274,143,3.635314,213,{"v":1.30906927123289e-13,"d":"1.31E-13"},3.66067703582032,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: ion transport (GO:0006811);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: detection of gravity (GO:0009590);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: negative gravitropism (GO:0009959);; Biological Process: circumnutation (GO:0010031);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: cellular response to stress (GO:0033554);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: lateral root development (GO:0048527);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: regulation of starch metabolic process (GO:2000904);; ","--","--","[R]","General function prediction only","--","Protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1","S","Function unknown","PREDICTED: protein SHOOT GRAVITROPISM 5 isoform X1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987)"]
["Bra036848","Bra036848",3.549916,175,6.693036,333,5.861359,268,4.079833,143,2.682259,91,1.969368,67,0.00612205495257357,-1.39169067920807,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103841013 [Brassica rapa]","--"]
["Bra013530","Bra013530",0.677745,30,0.221122,10,0.1994,9,2.756189,86,2.87292,86,2.953471,89,0.000109248356004261,2.27357143946007,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103859088 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028165","Bra028165",12.19981,2337,19.999812,3994,28.957758,4929,10.659705,1629,7.391535,1097,9.688342,1340,0.000269562262908465,-1.52336477033353,"down","[T]","Signal transduction mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: MAPK cascade (GO:0000165);; Molecular Function: guanylate cyclase activity (GO:0004383);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: binding (GO:0005488);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cGMP biosynthetic process (GO:0006182);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: defense response (GO:0006952);; Biological Process: cell communication (GO:0007154);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Wall-associated receptor kinase C-terminal;; Wall-associated receptor kinase galacturonan-binding","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.3 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3 isoform X3 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra015853","Bra015853",4.122203,353,3.521092,305,1.944592,155,1.919267,117,0.986755,58,1.59451,94,0.000585109194997758,-1.56373862273996,"down","[R]","General function prediction only","--","--","--","--","--","NmrA-like family;; NAD(P)H-binding;; NAD dependent epimerase/dehydratase family;; Saccharopine dehydrogenase NADP binding domain;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; KR domain","Isoflavone reductase homolog P3 OS=Arabidopsis thaliana OX=3702 GN=At1g75280 PE=2 SV=1","S","Function unknown","isoflavone reductase homolog P3 [Brassica napus] ","--"]
["Bra028877","Bra028877",27.343852,2041,17.839351,1375,17.118945,1213,9.655399,523,13.04921,675,15.934305,835,{"v":2.95852566301724e-05,"d":"2.96E-05"},-1.1948735737789,"down","[T]","Signal transduction mechanisms","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: innate immune response (GO:0045087);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PBL11 OS=Arabidopsis thaliana OX=3702 GN=PBL11 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: probable serine/threonine-protein kinase NAK [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra017285","Bra017285",33.876252,4117,11.74177,1426,13.009212,1516,8.765916,721,6.958286,537,8.892032,727,{"v":3.59581988797876e-05,"d":"3.60E-05"},-1.76561375497722,"down","[R]","General function prediction only","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Biological Process: cell adhesion (GO:0007155);; ","--","--","[MW]","Cell wall/membrane/envelope biogenesis;; Extracellular structures","Fasciclin domain","Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=FLA16 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: fasciclin-like arabinogalactan protein 16 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological adhesion (GO:0022610)"]
["Bra036972","Bra036972",215.60116,16354,405.118357,31219,402.250569,28394,137.875694,7606,58.521988,3137,63.91734,3403,{"v":4.10510091020283e-07,"d":"4.11E-07"},-2.41972332034567,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: protein serine/threonine phosphatase complex (GO:0008287);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana OX=3702 GN=At4g33920 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 63 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; molecular function: binding (GO:0005488)"]
["Bra006528","Bra006528",12.060531,791,15.320499,1014,11.993297,728,11.027825,512,7.535464,337,5.508059,248,0.000879916840645217,-1.24006478108038,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: transporter activity (GO:0005215);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: chloroplast (GO:0009507);; Biological Process: nucleotide-sugar transport (GO:0015780);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Cellular Component: intrinsic component of membrane (GO:0031224);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: transmembrane transport (GO:0055085);; ","--","--","[GOU]","Carbohydrate transport and metabolism;; Posttranslational modification, protein turnover, chaperones;; Intracellular trafficking, secretion, and vesicular transport","Triose-phosphate Transporter family;; EamA-like transporter family","GDP-fucose transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GFT1 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: GDP-mannose transporter GONST4-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422)"]
["Bra017561","Bra017561",0.487371,31,0.136507,9,0.351283,21,5.060302,224,3.685134,157,2.97484,128,{"v":1.28399798952815e-07,"d":"1.28E-07"},2.86978252032987,"up","--","--","Biological Process: immune effector process (GO:0002252);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to 1-aminocyclopropane-1-carboxylic acid (GO:0009961);; Biological Process: response to chitin (GO:0010200);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=WRKY8 PE=1 SV=1","--","--","probable WRKY transcription factor 8 [Brassica napus] ","biological process: immune system process (GO:0002376);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra026229","Bra026229",114.358335,12079,66.575467,7086,66.727176,6520,62.205284,4661,38.764964,2798,42.851997,3109,{"v":2.93841127427347e-05,"d":"2.94E-05"},-1.28431652609322,"down","--","--","Molecular Function: transporter activity (GO:0005215);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: transport (GO:0006810);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","--","--","[I]","Lipid transport and metabolism","CRAL/TRIO domain;; CRAL/TRIO, N-terminal domain","Patellin-4 OS=Arabidopsis thaliana OX=3702 GN=PATL4 PE=1 SV=2","S","Function unknown","PREDICTED: patellin-4-like [Brassica rapa]","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)"]
["Bra016265","Bra016265",39.624967,3733,86.500921,8335,82.463205,7110,34.035426,2275,22.882797,1963,31.531881,2108,{"v":5.01513345672752e-05,"d":"5.02E-05"},-1.64130716694663,"down","[T]","Signal transduction mechanisms","--","K04733|0|brp:103831520|K04733 interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1] | (RefSeq) protein kinase 2B, chloroplastic","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PBL18 OS=Arabidopsis thaliana OX=3702 GN=PBL18 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: protein kinase 2B, chloroplastic [Brassica rapa] ","--"]
["Bra023442","Bra023442",0.932139,108,0.977879,90,1.144697,121,4.641463,358,5.740227,411,4.324961,310,{"v":3.75119145664438e-08,"d":"3.75E-08"},1.67115842641721,"up","--","--","Molecular Function: aminopeptidase activity (GO:0004177);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; ","--","--","--","--","Protein of unknown function (DUF3754)","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: uncharacterized protein LOC103850906 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra006023","Bra006023",12.934712,394,14.779784,455,11.00372,311,0.913095,20,0.52167,11,1.086882,23,{"v":3.43220877092946e-29,"d":"3.43E-29"},-4.34981523649368,"down","--","--","Cellular Component: cell part (GO:0044464);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","--","--","--","--","--","--","BnaA03g55830D [Brassica napus]","cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra023336","Bra023336",368.309647,46069,465.395126,58405,455.670899,53055,149.327095,13339,119.952435,10202,112.228081,9766,{"v":2.69787250033357e-20,"d":"2.70E-20"},-2.2861753561421,"down","[C]","Energy production and conversion","Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0004471);; Molecular Function: malate dehydrogenase (decarboxylating) (NADP+) activity (GO:0004473);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: malate metabolic process (GO:0006108);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: cytoskeleton organization (GO:0007010);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: oxaloacetate decarboxylase activity (GO:0008948);; Biological Process: pentose-phosphate shunt, oxidative branch (GO:0009051);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0016619);; Molecular Function: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor (GO:0016652);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: cobalt ion binding (GO:0050897);; Biological Process: protein homooligomerization (GO:0051260);; Molecular Function: NAD binding (GO:0051287);; Biological Process: protein homotetramerization (GO:0051289);; ","K00029|0|brp:103850789|K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] | (RefSeq) NADP-dependent malic enzyme 2-like","Pyruvate metabolism (ko00620);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)","[C]","Energy production and conversion","Malic enzyme, NAD binding domain;; Malic enzyme, N-terminal domain","NADP-dependent malic enzyme 2 OS=Arabidopsis thaliana OX=3702 GN=NADP-ME2 PE=1 SV=1","C","Energy production and conversion","PREDICTED: NADP-dependent malic enzyme 2-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576)"]
["Bra011671","Bra011671",59.796411,7185,138.118537,16874,131.433133,14665,23.398115,1975,12.549848,1023,10.916633,889,{"v":1.43247543118526e-11,"d":"1.43E-11"},-3.27288200765928,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Molecular Function: binding (GO:0005488);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to auxin (GO:0009733);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: response to UV-B (GO:0010224);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: flavonoid 3'-monooxygenase activity (GO:0016711);; Molecular Function: heme binding (GO:0020037);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: ferulate 5-hydroxylase activity (GO:0046424);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: fatty acid alpha-hydroxylase activity (GO:0080132);; ","K09755|0|brp:103869607|K09755 ferulate-5-hydroxylase [EC:1.14.-.-] | (RefSeq) cytochrome P450 84A1","Phenylpropanoid biosynthesis (ko00940)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 84A1 OS=Arabidopsis thaliana OX=3702 GN=CYP84A1 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 84A1 isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra002216","Bra002216",100.821365,4636,57.078293,2649,48.908661,2081,176.33226,5736,438.149963,13720,396.277954,12486,{"v":7.68753251465058e-05,"d":"7.69E-05"},1.71012969609605,"up","[E]","Amino acid transport and metabolism","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: asparagine biosynthetic process (GO:0006529);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to aluminum ion (GO:0010044);; Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879);; ","--","--","--","--","Aluminium induced protein;; Glutamine amidotransferase domain;; Glutamine amidotransferase domain","Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1","S","Function unknown","stem-specific protein TSJT1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)"]
["Bra014544","Bra014544",1.654996,136,1.02443,85,0.785799,60,0.71577,42,0.198759,12,0.513536,29,0.00900432706336047,-1.65957979561264,"down","--","--","--","--","--","--","--","Plant protein of unknown function","UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1","S","Function unknown","PREDICTED: UPF0481 protein At3g47200-like [Brassica rapa] ","--"]
["Bra000351","Bra000351",69.765984,13411,96.935296,18818,95.634736,17010,54.559331,7407,66.941798,8750,66.101595,8702,0.000148312418823958,-1.04387334740622,"down","[C]","Energy production and conversion","Molecular Function: citrate (Si)-synthase activity (GO:0004108);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrial matrix (GO:0005759);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: glycolytic process (GO:0006096);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: chloroplast (GO:0009507);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: organic substance catabolic process (GO:1901575);; ","K01647|0|brp:103858130|K01647 citrate synthase [EC:2.3.3.1] | (RefSeq) citrate synthase 4, mitochondrial","Citrate cycle (TCA cycle) (ko00020);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[C]","Energy production and conversion","Citrate synthase, C-terminal domain","Citrate synthase 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CSY4 PE=1 SV=3","C","Energy production and conversion","PREDICTED: citrate synthase 4, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra008184","Bra008184",15.485196,2609,18.953947,3067,19.202095,2725,11.354701,1597,7.629822,1055,9.690737,1184,{"v":5.58622984187715e-06,"d":"5.59E-06"},-1.18232829872885,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: positive regulation of seed germination (GO:0010030);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: monosaccharide transport (GO:0015749);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: glucose homeostasis (GO:0042593);; Biological Process: oxidation-reduction process (GO:0055114);; ","K08145|0|brp:103852938|K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8 | (RefSeq) sugar transporter ERD6-like 6","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana OX=3702 GN=At1g75220 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: sugar transporter ERD6-like 6 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)"]
["Bra005103","Bra005103",0.931386,78,2.278121,191,1.72802,133,0.987002,58,0.541396,31,0.555037,32,0.00392502444130879,-1.71529342001605,"down","[T]","Signal transduction mechanisms","Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: nuclear-transcribed mRNA catabolic process (GO:0000956);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to hormone (GO:0009725);; Biological Process: stomatal movement (GO:0010118);; Biological Process: leaf senescence (GO:0010150);; Cellular Component: nuclear speck (GO:0016607);; Biological Process: calcium-mediated signaling (GO:0019722);; Cellular Component: interchromatin granule (GO:0035061);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; NAF domain;; Kinase-like","CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana OX=3702 GN=CIPK22 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: CBL-interacting serine/threonine-protein kinase 22-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: multi-organism process (GO:0051704)"]
["Bra004913","Bra004913",6.301868,114,2.745381,50,4.427066,74,15.489775,198,17.18816,212,25.768808,319,0.000426497137659423,1.53977388904695,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: leaf shaping (GO:0010358);; ","--","--","--","--","--","Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1","S","Function unknown","PREDICTED: protein LITTLE ZIPPER 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra040833","Bra040833",15.483352,588,28.212854,1102,30.343076,1058,3.598034,103,0.86122,22,0.616562,16,{"v":1.39167613248422e-08,"d":"1.39E-08"},-3.98098001196962,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: response to chemical (GO:0042221);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","Probable lipid transfer;; Protease inhibitor/seed storage/LTP family","Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana OX=3702 GN=At2g13820 PE=1 SV=1","S","Function unknown","PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152)"]
["Brassica_rapa_newGene_30360","--",1.726663,111,1.707799,110,1.950791,114,9.281807,409,12.284833,508,9.298637,400,{"v":3.47554092488317e-13,"d":"3.48E-13"},1.89622379269978,"up","--","--","Molecular Function: mRNA binding (GO:0003729);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plastid organization (GO:0009657);; ","K02945|8.74968e-25|crb:CARUB_v10021539mg|K02945 small subunit ribosomal protein S1 | (RefSeq) hypothetical protein","Ribosome (ko03010)","--","--","--","--","J","Translation, ribosomal structure and biogenesis","BnaC01g23770D [Brassica napus] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra030234","Bra030234",146.96228,3793,272.187256,7088,293.969025,7017,36.167648,661,11.181314,197,11.655734,207,{"v":1.92952732751206e-12,"d":"1.93E-12"},-3.93282594182119,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellular component organization (GO:0016043);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","--","Classical arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=AGP2 PE=1 SV=1","S","Function unknown","classical arabinogalactan protein 2 isoform X1 [Brassica napus] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra009473","Bra009473",2.5046,273,5.694525,597,6.520281,625,2.504731,180,1.325934,72,0.477946,39,0.000655680149499795,-2.27845177602752,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: heat acclimation (GO:0010286);; ","--","--","[TO]","Signal transduction mechanisms;; Posttranslational modification, protein turnover, chaperones","OTU-like cysteine protease","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: OTU domain-containing protein 5-A [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra037116","Bra037116",3.744365,206,2.67987,149,2.404687,123,2.246632,88,1.20135,45,1.39652,53,0.00136756891374815,-1.35476118363789,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837748 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra025280","Bra025280",22.30708,2982,40.855289,5543,45.182875,5620,31.462214,2993,11.700811,1068,13.697172,1262,0.00703063525712465,-1.44008770176093,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: binding (GO:0005488);; Molecular Function: iron ion binding (GO:0005506);; Biological Process: terpenoid metabolic process (GO:0006721);; Biological Process: multicellular organism development (GO:0007275);; Molecular Function: steroid hydroxylase activity (GO:0008395);; Biological Process: lipid biosynthetic process (GO:0008610);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Cellular Component: membrane (GO:0016020);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: trans-zeatin biosynthetic process (GO:0033466);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: oxidation-reduction process (GO:0055114);; ","K20660|0|brp:103875212|K20660 cytochrome P450 family 709 | (RefSeq) cytochrome P450 709B3-like","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450;; Mini-chromosome maintenance replisome factor","Cytochrome P450 709B3 OS=Arabidopsis thaliana OX=3702 GN=CYP709B3 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","BnaA06g32070D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020)"]
["Bra035116","Bra035116",9.6477,966,19.484753,1969,21.08186,1953,8.154612,578,4.34615,297,4.420887,304,{"v":1.53255317528075e-05,"d":"1.53E-05"},-2.06719439203827,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Biological Process: proline transport (GO:0015824);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: cellular response to salt stress (GO:0071472);; Biological Process: organic substance transport (GO:0071702);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Organic cation/carnitine transporter 5 OS=Arabidopsis thaliana OX=3702 GN=OCT5 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: organic cation/carnitine transporter 5-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425)"]
["Bra003947","Bra003947",13.057131,1577,19.143828,2396,22.21963,2179,7.740358,596,9.924598,709,7.59449,622,{"v":1.79295336180462e-08,"d":"1.79E-08"},-1.72199874477572,"down","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: response to stress (GO:0006950);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to hormone (GO:0009725);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K13464|4.20898e-144|brp:103830876|K13464 jasmonate ZIM domain-containing protein | (RefSeq) protein TIFY 7-like","Plant hormone signal transduction (ko04075)","--","--","tify domain;; Divergent CCT motif","Protein TIFY 7 OS=Arabidopsis thaliana OX=3702 GN=TIFY7 PE=1 SV=2","--","--","PREDICTED: protein TIFY 7-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052)"]
["Bra033308","Bra033308",1.543549,131,2.940327,240,2.692876,209,0.246873,15,0,0,0.187983,13,{"v":1.50119024154908e-05,"d":"1.50E-05"},-3.78464398657908,"down","--","--","Biological Process: regionalization (GO:0003002);; Molecular Function: binding (GO:0005488);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: proline biosynthetic process (GO:0006561);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: embryo development (GO:0009790);; Biological Process: meristem initiation (GO:0010014);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: camalexin biosynthetic process (GO:0010120);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: membrane (GO:0016020);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cell part (GO:0044464);; Biological Process: gynoecium development (GO:0048467);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: post-embryonic animal organ development (GO:0048569);; Biological Process: animal organ formation (GO:0048645);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: negative regulation of leaf senescence (GO:1900056);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=NAC005 PE=2 SV=2","K","Transcription","PREDICTED: NAC domain-containing protein 5-like [Brassica rapa] ","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414)"]
["Bra011734","Bra011734",13.034889,1249,37.944381,3585,40.496511,3625,14.376893,1166,13.894633,1153,14.376675,1160,0.00938018732425307,-1.33090728030899,"down","[T]","Signal transduction mechanisms","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: microtubule organizing center (GO:0005815);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: DNA repair (GO:0006281);; Biological Process: rRNA processing (GO:0006364);; Biological Process: mitotic cell cycle (GO:0007067);; Molecular Function: ATP-dependent helicase activity (GO:0008026);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cell tip growth (GO:0009932);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: chlorophyll catabolic process (GO:0015996);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: cell division (GO:0051301);; Biological Process: Golgi localization (GO:0051645);; Biological Process: mitochondrion localization (GO:0051646);; Molecular Function: red chlorophyll catabolite reductase activity (GO:0051743);; Biological Process: peroxisome localization (GO:0060151);; ","K13545|0|brp:103862886|K13545 red chlorophyll catabolite reductase [EC:1.3.7.12] | (RefSeq) RCCR; red chlorophyll catabolite reductase, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","--","--","Red chlorophyll catabolite reductase (RCC reductase);; EF hand;; EF-hand domain pair;; EF-hand domain;; EF-hand domain pair;; EF hand;; EF-hand domain;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region","Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RCCR PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: red chlorophyll catabolite reductase, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra039194","Bra039194",0.180008,27,0,0,0.015408,3,3.251386,295,7.512864,631,7.470556,636,{"v":3.3773072632429e-07,"d":"3.38E-07"},4.728412166315,"up","[P]","Inorganic ion transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: copper-exporting ATPase activity (GO:0004008);; Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Biological Process: response to stress (GO:0006950);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to toxic substance (GO:0009636);; Biological Process: response to light intensity (GO:0009642);; Biological Process: response to hormone (GO:0009725);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to inorganic substance (GO:0010035);; Molecular Function: cadmium-transporting ATPase activity (GO:0015434);; Molecular Function: zinc-transporting ATPase activity (GO:0015633);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: zinc-exporting ATPase activity (GO:0016463);; Molecular Function: ATPase activity (GO:0016887);; Cellular Component: macromolecular complex (GO:0032991);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: single-organism metabolic process (GO:0044710);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: metal ion transmembrane transporter activity (GO:0046873);; Biological Process: zinc ion homeostasis (GO:0055069);; Biological Process: copper ion export (GO:0060003);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[P]","Inorganic ion transport and metabolism","E1-E2 ATPase;; haloacid dehalogenase-like hydrolase","Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HMA1 PE=2 SV=2","P","Inorganic ion transport and metabolism","probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Brassica napus]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra033290","Bra033290",2.143395,149,6.072141,424,6.843293,438,0.193875,10,0.258288,13,0.289302,14,{"v":4.00826858786196e-14,"d":"4.01E-14"},-4.54389344446405,"down","[GER]","Carbohydrate transport and metabolism;; Amino acid transport and metabolism;; General function prediction only","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Cellular Component: chloroplast (GO:0009507);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: cell wall modification involved in abscission (GO:0009830);; Biological Process: response to organic substance (GO:0010033);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: single-organism transport (GO:0044765);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: animal organ development (GO:0048513);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","EamA-like transporter family","WAT1-related protein At1g01070 OS=Arabidopsis thaliana OX=3702 GN=At1g01070 PE=2 SV=1","S","Function unknown","WAT1-related protein At1g01070-like [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra018067","Bra018067",48.90081,3416,112.125862,7903,113.367256,7325,0.241421,12,0,0,0,0,0.000323399463899542,-4.37150349640384,"down","[O]","Posttranslational modification, protein turnover, chaperones","--","K16292|0|brp:103873155|K16292 KDEL-tailed cysteine endopeptidase [EC:3.4.22.-] | (RefSeq) KDEL-tailed cysteine endopeptidase CEP2","--","[O]","Posttranslational modification, protein turnover, chaperones","Papain family cysteine protease;; Cathepsin propeptide inhibitor domain (I29)","KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana OX=3702 GN=CEP2 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: KDEL-tailed cysteine endopeptidase CEP2 [Brassica rapa]","--"]
["Bra014842","Bra014842",12.045078,604,40.280805,2149,41.116876,1928,5.849271,256,10.10204,333,12.386854,461,0.00021266228513464,-2.1337200753681,"down","--","--","--","--","--","--","--","PAR1 protein","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103863264 [Brassica rapa] ","--"]
["Bra020315","Bra020315",107.799022,6182,175.978003,12629,203.398396,13363,5.676184,290,4.087487,195,5.113023,204,{"v":8.40613553129653e-40,"d":"8.41E-40"},-5.46459578793744,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Biological Process: metabolic process (GO:0008152);; Molecular Function: hydrolase activity (GO:0016787);; ","K07025|2.72768e-177|brp:103851576|K07025 putative hydrolase of the HAD superfamily | (RefSeq) suppressor of disruption of TFIIS-like","--","[R]","General function prediction only","Haloacid dehalogenase-like hydrolase","--","S","Function unknown","PREDICTED: suppressor of disruption of TFIIS-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra005398","Bra005398",5.19406,857,2.420232,403,2.583131,395,14.73272,1719,19.802265,2224,18.201559,2057,{"v":3.12476180628574e-08,"d":"3.12E-08"},1.81729344781446,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Biological Process: cell adhesion (GO:0007155);; Biological Process: positive regulation of cell proliferation (GO:0008284);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to auxin (GO:0009733);; Biological Process: seed germination (GO:0009845);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: embryonic pattern specification (GO:0009880);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: procambium histogenesis (GO:0010067);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: xylem development (GO:0010089);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of cell cycle process (GO:0010564);; Biological Process: cell growth (GO:0016049);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: lipid storage (GO:0019915);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Biological Process: cell wall biogenesis (GO:0042546);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: actin nucleation (GO:0045010);; Biological Process: meiotic chromosome segregation (GO:0045132);; Biological Process: regulation of cell differentiation (GO:0045595);; Biological Process: positive regulation of cell differentiation (GO:0045597);; Biological Process: determination of dorsal identity (GO:0048263);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: cotyledon development (GO:0048825);; Biological Process: response to freezing (GO:0050826);; Biological Process: cell division (GO:0051301);; Biological Process: cell wall organization (GO:0071555);; Biological Process: integument development (GO:0080060);; ","K09338|0|brp:103867425|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein ATHB-14","--","--","--","START domain;; MEKHLA domain;; Homeobox domain","Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana OX=3702 GN=ATHB-14 PE=1 SV=1","K","Transcription","PREDICTED: homeobox-leucine zipper protein ATHB-14 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: biological adhesion (GO:0022610);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179)"]
["Bra012963","Bra012963",7.634308,539,5.606942,392,6.500233,434,21.019354,1052,29.966445,1459,26.932634,1339,{"v":6.70077666778508e-10,"d":"6.70E-10"},1.44103228715841,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to nematode (GO:0009624);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: stromule (GO:0010319);; Biological Process: reductive pentose-phosphate cycle (GO:0019253);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; ","K01783|0|brp:103860590|K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] | (RefSeq) ribulose-phosphate 3-epimerase, chloroplastic","Pentose phosphate pathway (ko00030);; Pentose and glucuronate interconversions (ko00040);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)","[G]","Carbohydrate transport and metabolism","Ribulose-phosphate 3 epimerase family","Ribulose-phosphate 3-epimerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPE PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra010775","Bra010775",288.535614,42336,223.179574,33709,254.34327,34937,180.959832,18773,110.344494,10974,106.158144,10768,{"v":1.54004838303361e-07,"d":"1.54E-07"},-1.48414303047117,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast envelope (GO:0009941);; ","--","--","[R]","General function prediction only","Calcium-dependent channel, 7TM region, putative phosphate;; Cytosolic domain of 10TM putative phosphate transporter;; Late exocytosis, associated with Golgi transport","CSC1-like protein ERD4 OS=Brassica juncea OX=3707 GN=ERD4 PE=3 SV=2","S","Function unknown","CSC1-like protein ERD4 [Brassica napus]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054)"]
["Bra022160","Bra022160",127.745904,17115,221.387829,29852,197.360939,24297,131.685548,12370,48.318787,4395,40.451896,3696,0.000915601565919522,-1.79602262396001,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: peptide receptor activity (GO:0001653);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein folding (GO:0006457);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: water transport (GO:0006833);; Biological Process: defense response (GO:0006952);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: Golgi organization (GO:0007030);; Biological Process: cell adhesion (GO:0007155);; Cellular Component: proteasome regulatory particle, base subcomplex (GO:0008540);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: photorespiration (GO:0009853);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: membrane (GO:0016020);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: glucosinolate catabolic process (GO:0019762);; Molecular Function: IgA binding (GO:0019862);; Molecular Function: enzyme regulator activity (GO:0030234);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: stamen formation (GO:0048455);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: nitrile biosynthetic process (GO:0080028);; Biological Process: proteasome core complex assembly (GO:0080129);; ","--","--","--","--","Jacalin-like lectin domain","Jacalin-related lectin 34 OS=Arabidopsis thaliana OX=3702 GN=JAL34 PE=1 SV=1","S","Function unknown","jacalin-related lectin 34 [Brassica napus]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological adhesion (GO:0022610);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; molecular function: enzyme regulator activity (GO:0030234);; biological process: growth (GO:0040007)"]
["Bra027077","Bra027077",57.537495,5135,132.162033,11903,138.043762,11397,38.323505,2420,45.065792,2739,43.2715,2647,{"v":9.0569195217956e-06,"d":"9.06E-06"},-1.90046878665972,"down","--","--","Biological Process: protein targeting to membrane (GO:0006612);; Cellular Component: chloroplast (GO:0009507);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Sulfite exporter TauE/SafE","Sulfite exporter TauE/SafE family protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g61740 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103838434 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra018344","Bra018344",47.020435,3056,83.036308,5447,69.617882,4186,8.210853,378,6.251507,277,6.666112,297,{"v":5.20599626587465e-29,"d":"5.21E-29"},-3.73775282720362,"down","[T]","Signal transduction mechanisms","--","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Brassica rapa]","--"]
["Bra008221","Bra008221",2.898375,375,2.397471,364,2.072413,298,7.709033,773,14.098481,1391,10.030992,991,{"v":7.80122879321616e-07,"d":"7.80E-07"},1.53653330373327,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103852978 [Brassica rapa]","--"]
["Bra035312","Bra035312",1.808322,112,1.026022,75,1.542488,94,4.132337,207,6.062416,269,6.673549,307,{"v":2.1562360058732e-05,"d":"2.16E-05"},1.40958749223053,"up","[H]","Coenzyme transport and metabolism","Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: isoprenoid biosynthetic process (GO:0008299);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: plastid organization (GO:0009657);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Cellular Component: membrane (GO:0016020);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: developmental process (GO:0032502);; Biological Process: ncRNA metabolic process (GO:0034660);; Molecular Function: chlorophyll synthetase activity (GO:0046408);; ","K04040|6.9263e-48|brp:103848555|K04040 chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] | (RefSeq) chlorophyll synthase, chloroplastic-like","Porphyrin and chlorophyll metabolism (ko00860)","--","--","--","Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLG PE=2 SV=1","H","Coenzyme transport and metabolism","PREDICTED: chlorophyll synthase, chloroplastic-like isoform X4 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824)"]
["Bra027058","Bra027058",2.388131,177,8.161568,611,8.83158,606,0.642559,34,0.895628,46,1.143961,59,{"v":1.32341371406228e-07,"d":"1.32E-07"},-3.20516974029324,"down","[V]","Defense mechanisms","Molecular Function: transporter activity (GO:0005215);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: anion transport (GO:0006820);; Biological Process: cellular ion homeostasis (GO:0006873);; Molecular Function: voltage-gated anion channel activity (GO:0008308);; Biological Process: response to humidity (GO:0009270);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: response to ozone (GO:0010193);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cytidine to uridine editing (GO:0016554);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: multicellular organismal water homeostasis (GO:0050891);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: nitrogen compound transport (GO:0071705);; Biological Process: stomatal closure (GO:0090332);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","--","--","--","--","Voltage-dependent anion channel","S-type anion channel SLAH1 OS=Arabidopsis thaliana OX=3702 GN=SLAH1 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: S-type anion channel SLAH1-like [Brassica rapa]","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501)"]
["Bra030421","Bra030421",2.045584,240,1.739454,183,1.506344,163,4.67924,387,7.200059,576,5.517335,440,{"v":1.73723974735078e-05,"d":"1.74E-05"},1.20931157015352,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: lyase activity (GO:0016829);; ","--","--","--","--","FBD;; F-box domain;; Leucine Rich Repeat","FBD-associated F-box protein At5g38590 OS=Arabidopsis thaliana OX=3702 GN=At5g38590 PE=2 SV=1","S","Function unknown","PREDICTED: FBD-associated F-box protein At5g38590-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra039715","Bra039715",0.834635,61,1.373414,100,1.523369,102,0.804389,41,0.214098,11,0.210146,11,0.00857972476975308,-1.95336281920899,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: defense response (GO:0006952);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; ","--","--","--","--","Protein of unknown function (DUF4005);; IQ calmodulin-binding motif","Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana OX=3702 GN=IQD31 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103833471 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra005435","Bra005435",0.647501,68,2.251378,234,1.945914,186,0.290083,23,0.640418,46,0.104754,8,0.00193430468594672,-2.45442434464265,"down","--","--","--","--","--","--","--","Nodulin-like;; Major Facilitator Superfamily","Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1","S","Function unknown","PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Brassica rapa]","--"]
["Bra011511","Bra011511",36.849137,4238,19.394994,2268,22.966431,2430,15.567935,1300,9.848725,778,8.400399,664,{"v":2.31347757541868e-06,"d":"2.31E-06"},-1.69279874109502,"down","[C]","Energy production and conversion","Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity (GO:0004028);; Molecular Function: aldehyde dehydrogenase (NAD) activity (GO:0004029);; Molecular Function: aldehyde dehydrogenase [NAD(P)+] activity (GO:0004030);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: cellular aldehyde metabolic process (GO:0006081);; Biological Process: response to stress (GO:0006950);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: amyloplast (GO:0009501);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: aldehyde dehydrogenase (NADP+) activity (GO:0033721);; Biological Process: response to chemical (GO:0042221);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00128|0|bna:106356928|K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | (RefSeq) ALDH3; aldehyde dehydrogenase family 3 member I1, chloroplastic-like","Glycolysis / Gluconeogenesis (ko00010);; Pentose and glucuronate interconversions (ko00040);; Ascorbate and aldarate metabolism (ko00053);; Fatty acid degradation (ko00071);; Valine, leucine and isoleucine degradation (ko00280);; Lysine degradation (ko00310);; Arginine and proline metabolism (ko00330);; Histidine metabolism (ko00340);; Tryptophan metabolism (ko00380);; beta-Alanine metabolism (ko00410);; Glycerolipid metabolism (ko00561);; Pyruvate metabolism (ko00620);; Limonene and pinene degradation (ko00903)","[C]","Energy production and conversion","Aldehyde dehydrogenase family","Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALDH3I1 PE=1 SV=2","C","Energy production and conversion","aldehyde dehydrogenase family 3 member I1, chloroplastic [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422)"]
["Bra014771","Bra014771",7.939192,975,17.648056,2188,20.641441,2345,5.689372,495,1.902136,160,2.354088,199,{"v":5.61748377755727e-06,"d":"5.62E-06"},-2.63378025422611,"down","--","--","--","K07195|0|brp:103863188|K07195 exocyst complex component 7 | (RefSeq) exocyst complex component EXO70A1","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Exo70 exocyst complex subunit","Exocyst complex component EXO70H1 OS=Arabidopsis thaliana OX=3702 GN=EXO70H1 PE=1 SV=1","S","Function unknown","PREDICTED: exocyst complex component EXO70A1 [Brassica rapa]","--"]
["Bra015561","Bra015561",3.593278,651,4.565545,828,3.890637,642,15.759245,1998,22.848037,2791,19.283639,2379,{"v":1.34776631417156e-10,"d":"1.35E-10"},1.67932962927415,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: binding (GO:0005488);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: response to heat (GO:0009408);; Biological Process: plastid organization (GO:0009657);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: membrane (GO:0016020);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: establishment of localization in cell (GO:0051649);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","AAA domain (Cdc48 subfamily)","Protein SMAX1-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SMXL6 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: protein SMAX1-LIKE 6 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179)"]
["Bra030232","Bra030232",2.861767,276,4.369536,341,2.720775,244,13.896633,769,18.388819,1016,20.028451,1102,{"v":3.27698389040395e-09,"d":"3.28E-09"},1.67045750489629,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: cell proliferation (GO:0008283);; Biological Process: response to sucrose (GO:0009744);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: stomatal lineage progression (GO:0010440);; Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);; Biological Process: DNA endoreduplication (GO:0042023);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: negative regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0045736);; Biological Process: system development (GO:0048731);; Biological Process: regulation of cell cycle (GO:0051726);; ","K18810|0|brp:103864358|K18810 cyclin D1/2/4, plant | (RefSeq) cyclin-D2-1-like","--","[D]","Cell cycle control, cell division, chromosome partitioning","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: cyclin-D2-1-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; biological process: metabolic process (GO:0008152)"]
["Bra018214","Bra018214",50.024094,8095,52.598118,8589,53.573811,8019,35.815075,4100,32.048286,3532,28.75971,3189,{"v":4.59511995081046e-11,"d":"4.60E-11"},-1.24309922269779,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Biological Process: meiotic chromosome segregation (GO:0045132);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Carbohydrate-binding protein of the ER;; Di-glucose binding within endoplasmic reticulum","Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: receptor-like protein kinase HERK 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra004064","Bra004064",14.000181,2166,3.250014,497,5.362619,744,21.627841,2348,34.826172,3746,32.636393,3504,0.00753068869162194,1.44610629631536,"up","--","--","Molecular Function: signal transducer activity (GO:0004871);; Cellular Component: late endosome (GO:0005770);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: signal transduction (GO:0007165);; Biological Process: pattern specification process (GO:0007389);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to blue light (GO:0009637);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: inflorescence development (GO:0010229);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: apical protein localization (GO:0045176);; Biological Process: meristem development (GO:0048507);; Biological Process: cotyledon development (GO:0048825);; Biological Process: cell wall organization or biogenesis (GO:0071554);; ","--","--","--","--","NPH3 family","BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana OX=3702 GN=At1g67900 PE=1 SV=1","S","Function unknown","PREDICTED: BTB/POZ domain-containing protein At1g67900 [Brassica rapa] ","molecular function: molecular transducer activity (GO:0060089);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152)"]
["Bra031623","Bra031623",2.259346,286,1.92616,236,1.868903,218,5.910594,497,7.086303,609,5.051579,434,{"v":3.24093744999191e-05,"d":"3.24E-05"},1.0055108722225,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Cellular Component: P-body (GO:0000932);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: RNA processing (GO:0006396);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: secondary cell wall (GO:0009531);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: xylem development (GO:0010089);; Biological Process: response to far red light (GO:0010218);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: GTPase activator activity (GO:0030675);; Biological Process: deadenylation-independent decapping of nuclear-transcribed mRNA (GO:0031087);; Biological Process: positive regulation of GTPase activity (GO:0032855);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: root hair cell differentiation (GO:0048765);; Molecular Function: m7G(5')pppN diphosphatase activity (GO:0050072);; ","K12611|0|bna:106420151|K12611 mRNA-decapping enzyme 1B [EC:3.-.-.-] | (RefSeq) mRNA-decapping enzyme-like protein","RNA degradation (ko03018)","[KA]","Transcription;; RNA processing and modification","Dcp1-like decapping family;; RhoGAP domain;; P21-Rho-binding domain","mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g08370 PE=1 SV=2","S","Function unknown","mRNA-decapping enzyme-like protein [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; molecular function: enzyme regulator activity (GO:0030234);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; molecular function: catalytic activity (GO:0003824)"]
["Bra012238","Bra012238",161.436855,36177,75.469141,16735,81.29427,16343,245.016452,39265,441.244969,67299,402.898259,61756,0.00103035802381972,1.24891369757704,"up","[P]","Inorganic ion transport and metabolism","Biological Process: amino acid transmembrane transport (GO:0003333);; Molecular Function: catalase activity (GO:0004096);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: cell death (GO:0008219);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: glyoxysome (GO:0009514);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: photoperiodism (GO:0009648);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: photorespiration (GO:0009853);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular response to sulfate starvation (GO:0009970);; Cellular Component: stromule (GO:0010319);; Molecular Function: amino acid transmembrane transporter activity (GO:0015171);; Molecular Function: basic amino acid transmembrane transporter activity (GO:0015174);; Molecular Function: basic amino acid transmembrane transporter activity (GO:0015326);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Molecular Function: heme binding (GO:0020037);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: cellular lipid catabolic process (GO:0044242);; Biological Process: cell redox homeostasis (GO:0045454);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Molecular Function: cobalt ion binding (GO:0050897);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: divalent metal ion transport (GO:0070838);; ","K03781|0|brp:103872849|K03781 catalase [EC:1.11.1.6] | (RefSeq) catalase-3","Tryptophan metabolism (ko00380);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200);; Peroxisome (ko04146)","[P]","Inorganic ion transport and metabolism","Catalase;; Catalase-related immune-responsive","Catalase-3 OS=Arabidopsis thaliana OX=3702 GN=CAT3 PE=1 SV=3","P","Inorganic ion transport and metabolism","PREDICTED: catalase-3 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488);; cellular component: macromolecular complex (GO:0032991);; cellular component: extracellular region (GO:0005576)"]
["Bra011479","Bra011479",16.322388,881,23.862883,1333,22.724326,1134,15.082551,557,9.039315,343,5.554476,286,{"v":8.38116690932005e-05,"d":"8.38E-05"},-1.53524555471278,"down","--","--","Biological Process: response to superoxide (GO:0000303);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: intracellular signal transduction (GO:0035556);; ","K15707|9.48403e-154|brp:103843481|K15707 RING finger protein 170 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RNF170","--","[O]","Posttranslational modification, protein turnover, chaperones","Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase RNF170 isoform X1 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra019866","Bra019866",58.002468,13398,41.472634,10842,47.345696,11463,7.531097,1514,18.515576,2936,25.34974,3570,{"v":3.75341363042795e-09,"d":"3.75E-09"},-2.14626445320217,"down","[T]","Signal transduction mechanisms","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to blue light (GO:0009637);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: pollen-pistil interaction (GO:0009875);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: mRNA modification (GO:0016556);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: recognition of pollen (GO:0048544);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; S-locus glycoprotein domain;; D-mannose binding lectin;; PAN-like domain;; Domain of unknown function (DUF3403)","G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3","T","Signal transduction mechanisms","PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra020462","Bra020462",7.862892,393,9.949421,502,9.467056,455,6.048647,218,3.391643,144,4.611053,181,{"v":1.79588318582808e-05,"d":"1.80E-05"},-1.35989012046942,"down","--","--","Biological Process: cell fate specification (GO:0001708);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: defense response (GO:0006952);; Biological Process: organelle organization (GO:0006996);; Biological Process: response to cold (GO:0009409);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: flower development (GO:0009908);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: stomatal lineage progression (GO:0010440);; Biological Process: regulation of iron ion transport (GO:0034756);; Molecular Function: bHLH transcription factor binding (GO:0043425);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to nitric oxide (GO:0071732);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor bHLH35-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra011918","Bra011918",1.346274,89,1.046651,74,1.06201,66,7.101543,337,14.883135,674,14.782787,656,{"v":7.70869582907123e-13,"d":"7.71E-13"},2.75298135771067,"up","[R]","General function prediction only","Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: photosynthesis (GO:0015979);; Biological Process: carotenoid biosynthetic process (GO:0016117);; ","--","--","--","--","--","Protein MET1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MET1 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103829781 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra000993","Bra000993",32.888857,5266,32.050436,5154,28.896622,4277,23.839952,2704,15.314827,1789,17.635165,2021,{"v":3.61887221928699e-08,"d":"3.62E-08"},-1.21469769325937,"down","--","--","Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K20781|0|brp:103858895|K20781 peptidyl serine alpha-galactosyltransferase [EC:2.4.1.-] | (RefSeq) uncharacterized LOC103858895","--","--","--","--","Peptidyl serine alpha-galactosyltransferase OS=Arabidopsis thaliana OX=3702 GN=SERGT1 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103858895 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra025467","Bra025467",7.336375,1839,9.133359,2206,11.342591,2515,2.107716,377,1.599356,266,1.855318,316,{"v":8.75499642011967e-22,"d":"8.75E-22"},-2.80770724275703,"down","[R]","General function prediction only","Molecular Function: binding (GO:0005488);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to ozone (GO:0010193);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: intracellular part (GO:0044424);; Biological Process: localization (GO:0051179);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain","Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 SV=1","S","Function unknown","PREDICTED: disease resistance protein RML1A-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: localization (GO:0051179)"]
["Bra017915","Bra017915",61.102409,4849,70.85276,5674,66.083763,4851,54.639599,3068,37.158749,2008,37.632439,2047,{"v":1.47894606021995e-05,"d":"1.48E-05"},-1.15934640633897,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","--","--","--","--","GRAS domain family","Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1","S","Function unknown","PREDICTED: scarecrow-like protein 1 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra005650","Bra005650",1.99133,85,1.41829,62,1.543392,61,0.342815,11,0.319221,10,0,0,0.00229824325012413,-2.8070575822936,"down","[R]","General function prediction only","Biological Process: cytokinesis (GO:0000910);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi stack (GO:0005795);; Cellular Component: Golgi-associated vesicle (GO:0005798);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: nucleocytoplasmic transport (GO:0006913);; Biological Process: small GTPase mediated signal transduction (GO:0007264);; Biological Process: response to heat (GO:0009408);; Cellular Component: cell plate (GO:0009504);; Biological Process: response to auxin (GO:0009733);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Molecular Function: kinase binding (GO:0019900);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Cellular Component: early endosome membrane (GO:0031901);; Biological Process: endocytic recycling (GO:0032456);; Cellular Component: trans-Golgi network membrane (GO:0032588);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: apical part of cell (GO:0045177);; Biological Process: inter-Golgi cisterna vesicle-mediated transport (GO:0048219);; Biological Process: photoperiodism, flowering (GO:0048573);; Cellular Component: exocytic vesicle (GO:0070382);; Biological Process: regulation of pollen tube growth (GO:0080092);; Cellular Component: pollen tube tip (GO:0090404);; ","K07904|8.73109e-160|brp:103867712|K07904 Ras-related protein Rab-11A | (RefSeq) ras-related protein RABA5d","Endocytosis (ko04144)","[U]","Intracellular trafficking, secretion, and vesicular transport","Ras family;; Ras of Complex, Roc, domain of DAPkinase;; ADP-ribosylation factor family;; 50S ribosome-binding GTPase","Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1","S","Function unknown","PREDICTED: ras-related protein RABA5d [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra024618","Bra024618",2.245333,234,2.116082,231,2.245107,224,2.143944,161,0.777756,72,1.28818,93,0.00959018806420882,-1.10787316575386,"down","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Cellular Component: nucleus (GO:0005634);; Biological Process: cell proliferation (GO:0008283);; Biological Process: petal formation (GO:0048451);; Biological Process: sepal formation (GO:0048453);; ","--","--","--","--","Plant protein of unknown function (DUF936)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103840736 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra035263","Bra035263",4.922579,364,2.879453,232,3.07285,215,10.615337,553,13.735971,715,11.20366,578,{"v":1.6390456341142e-05,"d":"1.64E-05"},1.1473299807908,"up","--","--","Molecular Function: triglyceride lipase activity (GO:0004806);; Cellular Component: nucleus (GO:0005634);; Biological Process: lipid metabolic process (GO:0006629);; ","--","--","--","--","Lipase (class 3)","GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana OX=3702 GN=At4g10955 PE=2 SV=1","S","Function unknown","PREDICTED: GDSL esterase/lipase At4g10955 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Brassica_rapa_newGene_11698","--",0.809782,70,0.798525,68,1.073043,62,2.052712,125,2.362342,135,3.838424,226,0.00462504945494681,1.196891178051,"up","--","--","Molecular Function: serine-type endopeptidase activity (GO:0004252);; Biological Process: proteolysis (GO:0006508);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: chloroplast organization (GO:0009658);; Cellular Component: chloroplastic endopeptidase Clp complex (GO:0009840);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: plastoglobule (GO:0010287);; ","K01358|3.79625e-17|eus:EUTSA_v10008424mg|K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] | (RefSeq) hypothetical protein","--","[O]","Posttranslational modification, protein turnover, chaperones","--","ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR2 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Capsicum annuum] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991)"]
["Bra020370","Bra020370",7.434634,462,4.938815,310,4.321304,248,3.758051,165,163.77138,6911,156.228347,6623,0.000356585179072102,3.17268889628569,"up","--","--","Molecular Function: peroxidase activity (GO:0004601);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to hypoxia (GO:0071456);; ","K00430|0|brp:103851641|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 67","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 67 OS=Arabidopsis thaliana OX=3702 GN=PER67 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 67 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; cellular component: extracellular region (GO:0005576)"]
["Bra003936","Bra003936",0.277569,9,0.882553,29,0.796502,24,2.218879,51,4.18089,92,6.267087,139,0.00910288913689726,1.90372837063257,"up","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: response to chitin (GO:0010200);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of cell cycle process (GO:0010564);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: lipid storage (GO:0019915);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: transcription factor import into nucleus (GO:0042991);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of cell differentiation (GO:0045595);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: root development (GO:0048364);; Biological Process: cotyledon development (GO:0048825);; Biological Process: response to freezing (GO:0050826);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cell division (GO:0051301);; Biological Process: cellular response to salt stress (GO:0071472);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF070 OS=Arabidopsis thaliana OX=3702 GN=ERF070 PE=1 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF070-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; biological process: multi-organism process (GO:0051704)"]
["Bra001159","Bra001159",4.500369,1552,7.933828,1948,7.38601,1357,4.399608,543,2.776874,613,4.964351,495,{"v":4.67823731874397e-11,"d":"4.68E-11"},-1.59428279901008,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: regulation of DNA replication (GO:0006275);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein complex assembly (GO:0006461);; Biological Process: cytoskeleton organization (GO:0007010);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: histone acetylation (GO:0016573);; Biological Process: cell cycle process (GO:0022402);; Molecular Function: histone methyltransferase activity (H3-K27 specific) (GO:0046976);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: histone H3-K27 methylation (GO:0070734);; ","--","--","[K]","Transcription","PHD-finger;; Ring finger domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103859105 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra000005","Bra000005",24.680856,1822,17.777307,1320,14.387337,1009,14.542911,909,11.282554,616,7.63863,349,0.00652693948520923,-1.14436059669585,"down","--","--","Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: endocytosis (GO:0006897);; Biological Process: cell cycle (GO:0007049);; Biological Process: cell-cell signaling (GO:0007267);; Molecular Function: GTPase activator activity (GO:0008060);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to auxin (GO:0009733);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: phloem or xylem histogenesis (GO:0010087);; Biological Process: floral organ abscission (GO:0010227);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Molecular Function: L,L-diaminopimelate aminotransferase activity (GO:0010285);; Biological Process: positive regulation of organelle organization (GO:0010638);; Biological Process: cell growth (GO:0016049);; Cellular Component: trans-Golgi network transport vesicle (GO:0030140);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: regulation of GTPase activity (GO:0032312);; Biological Process: activation of GTPase activity (GO:0032857);; Molecular Function: phosphatidylinositol binding (GO:0035091);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Cellular Component: nuclear part (GO:0044428);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: floral organ formation (GO:0048449);; Biological Process: developmental growth (GO:0048589);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: cell wall organization (GO:0071555);; ","K12492|0|brp:103857718|K12492 ADP-ribosylation factor GTPase-activating protein 1 | (RefSeq) ADP-ribosylation factor GTPase-activating protein AGD7-like","Endocytosis (ko04144)","[TUZ]","Signal transduction mechanisms;; Intracellular trafficking, secretion, and vesicular transport;; Cytoskeleton","Putative GTPase activating protein for Arf","ADP-ribosylation factor GTPase-activating protein AGD7 OS=Arabidopsis thaliana OX=3702 GN=AGD7 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD7-like [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; molecular function: enzyme regulator activity (GO:0030234);; biological process: multicellular organismal process (GO:0032501);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007)"]
["Bra016652","Bra016652",3.04096,225,1.499042,112,1.926774,132,4.754528,248,8.610479,433,8.547551,432,0.00412057032056229,1.19439888897965,"up","[C]","Energy production and conversion","--","K02115|0|brp:103836020|K02115 F-type H+-transporting ATPase subunit gamma | (RefSeq) ATP synthase gamma chain 2, chloroplastic","Oxidative phosphorylation (ko00190);; Photosynthesis (ko00195)","[C]","Energy production and conversion","ATP synthase","ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATPC2 PE=2 SV=1","C","Energy production and conversion","PREDICTED: ATP synthase gamma chain 2, chloroplastic [Brassica rapa]","--"]
["Bra029099","Bra029099",37.49401,4790,37.194439,4725,40.408512,4777,16.431582,1673,15.787276,1347,13.537574,1259,{"v":6.41963989276949e-20,"d":"6.42E-20"},-1.78767624844626,"down","[E]","Amino acid transport and metabolism","Cellular Component: cytoplasm (GO:0005737);; Biological Process: metabolic process (GO:0008152);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","[I]","Lipid transport and metabolism","alpha/beta hydrolase fold;; Alpha/beta hydrolase family;; Serine aminopeptidase, S33","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103857105 isoform X3 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra016914","Bra016914",56.511253,2785,75.278221,3744,73.076744,3332,31.984924,1116,21.875656,735,25.011089,845,{"v":3.08960673639265e-11,"d":"3.09E-11"},-1.91509370906586,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to hormone (GO:0009725);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[R]","General function prediction only","AN1-like Zinc finger","Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 OS=Arabidopsis thaliana OX=3702 GN=SAP11 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987)"]
["Brassica_rapa_newGene_13334","--",9.495827,743,17.023507,1331,14.579313,1142,2.536551,152,1.544685,90,2.071535,121,{"v":1.35855805769007e-15,"d":"1.36E-15"},-3.14230452542797,"down","--","--","Molecular Function: ATP binding (GO:0005524);; Biological Process: transport (GO:0006810);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC-transporter extracellular N-terminal;; ABC transporter","ABC transporter G family member 35 OS=Arabidopsis thaliana OX=3702 GN=ABCG35 PE=2 SV=1","V","Defense mechanisms","BnaA06g09870D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra024626","Bra024626",6.400491,472,4.455997,330,5.795371,400,16.679011,863,19.510472,970,22.128235,1108,{"v":8.27195723455118e-08,"d":"8.27E-08"},1.23526186901893,"up","[R]","General function prediction only","Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","NHL repeat","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103840723 isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576)"]
["Bra039569","Bra039569",2.153745,220,1.415331,157,1.046882,104,3.498064,264,5.541788,372,7.269813,535,0.00400787091798432,1.23107475416363,"up","--","--","Biological Process: response to stress (GO:0006950);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: single-organism transport (GO:0044765);; Biological Process: establishment of localization in cell (GO:0051649);; Cellular Component: cell periphery (GO:0071944);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[K]","Transcription","Tudor domain","Ribonuclease TUDOR 1 OS=Arabidopsis thaliana OX=3702 GN=TSN1 PE=1 SV=1","L","Replication, recombination and repair","BnaA01g18800D [Brassica napus]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra000235","Bra000235",2.530783,118,8.19921,386,6.542102,282,1.408985,47,1.368435,44,1.347497,43,{"v":1.26192536220001e-05,"d":"1.26E-05"},-2.498480568267,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein folding (GO:0006457);; Biological Process: response to stress (GO:0006950);; Biological Process: signal transduction (GO:0007165);; Biological Process: asymmetric cell division (GO:0008356);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: response to hydrogen peroxide (GO:0042542);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; ","K09419|2.59073e-153|bna:106437980|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat stress transcription factor B-3-like","--","[K]","Transcription","HSF-type DNA-binding","Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE=1 SV=1","K","Transcription","PREDICTED: heat stress transcription factor B-3 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699)"]
["Bra017763","Bra017763",0.734713,59,0.377267,39,0.863017,64,2.38892,133,3.233882,201,3.807421,210,0.000135817723407921,1.64098186017824,"up","[I]","Lipid transport and metabolism","Cellular Component: nucleus (GO:0005634);; Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);; Biological Process: methylation (GO:0032259);; ","--","--","--","--","SAM dependent carboxyl methyltransferase","Salicylate carboxymethyltransferase OS=Clarkia breweri OX=36903 GN=SAMT PE=1 SV=1","S","Function unknown","PREDICTED: salicylate carboxymethyltransferase-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra020046","Bra020046",1.053233,99,1.035698,96,1.56564,135,3.604681,231,5.690646,360,6.110531,360,0.000371501700379798,1.41992311179141,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103851282 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028604","Bra028604",19.492799,1818,35.444135,3448,23.343707,2962,7.680561,719,11.397309,681,8.151135,722,{"v":2.13757698991993e-08,"d":"2.14E-08"},-1.99504354506189,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: response to cold (GO:0009409);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: meiotic chromosome segregation (GO:0045132);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: petal formation (GO:0048451);; Biological Process: sepal formation (GO:0048453);; Biological Process: defense response to fungus (GO:0050832);; ","K14431|0|brp:103850347|K14431 transcription factor TGA | (RefSeq) transcription factor TGA4","Plant hormone signal transduction (ko04075)","--","--","Seed dormancy control;; bZIP transcription factor;; Basic region leucine zipper","Transcription factor TGA4 OS=Arabidopsis thaliana OX=3702 GN=TGA4 PE=1 SV=2","K","Transcription","PREDICTED: transcription factor TGA4 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra007684","Bra007684",2.743457,346,1.907719,245,1.710447,202,1.337333,126,0.528262,51,0.508957,49,0.000427414962808344,-1.76802187550881,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: protein folding (GO:0006457);; Biological Process: response to stress (GO:0006950);; Molecular Function: heat shock protein binding (GO:0031072);; ","--","--","--","--","Tetratricopeptide repeat;; Tetratricopeptide repeat","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103842063 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)"]
["Bra025562","Bra025562",1.067913,136,0.679672,87,0.913811,108,3.503048,314,3.57263,309,3.959367,344,{"v":1.1090825615926e-08,"d":"1.11E-08"},1.48763705039138,"up","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: meiosis I (GO:0007127);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: chromosome organization (GO:0051276);; ","--","--","--","--","Leucine Rich Repeat","F-box/LRR-repeat protein At3g62440 OS=Arabidopsis thaliana OX=3702 GN=At3g62440 PE=2 SV=1","S","Function unknown","PREDICTED: F-box/LRR-repeat protein At3g62440 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007)"]
["Bra000635","Bra000635",11.655351,1595,7.592801,1059,7.888194,1010,6.864145,673,4.407567,415,4.582078,439,{"v":9.37784587308601e-06,"d":"9.38E-06"},-1.27850907066539,"down","[N]","Cell motility","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: cell tip growth (GO:0009932);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Molecular Function: cellulose synthase activity (GO:0016759);; Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);; Biological Process: cellulose metabolic process (GO:0030243);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: pollen tube development (GO:0048868);; Molecular Function: mannan synthase activity (GO:0051753);; ","--","--","--","--","Glycosyltransferase like family 2;; Glycosyl transferase family group 2;; Glycosyl transferase family 2;; Glycosyl transferase family 21","Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana OX=3702 GN=CSLC12 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: probable xyloglucan glycosyltransferase 12 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra023331","Bra023331",3.869222,537,3.233233,440,2.368333,281,10.785884,1033,13.249047,1169,11.910819,1094,{"v":6.67542286191751e-08,"d":"6.68E-08"},1.34984077113561,"up","[DZ]","Cell cycle control, cell division, chromosome partitioning;; Cytoskeleton","Molecular Function: chromatin binding (GO:0003682);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: Ran GTPase binding (GO:0008536);; Cellular Component: intracellular part (GO:0044424);; ","--","--","[S]","Function unknown","Regulator of chromosome condensation (RCC1) repeat;; Regulator of chromosome condensation (RCC1) repeat","Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1","DZ","Cell cycle control, cell division, chromosome partitioning;; Cytoskeleton","PREDICTED: ultraviolet-B receptor UVR8 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)"]
["Bra013776","Bra013776",12.763849,365,6.995625,202,6.096907,161,27.89562,563,33.999043,661,38.450302,752,{"v":3.53099259679167e-05,"d":"3.53E-05"},1.4041095555032,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: seed germination (GO:0009845);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: positive regulation of gibberellic acid mediated signaling pathway (GO:0009939);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: SCF complex assembly (GO:0010265);; Biological Process: raffinose family oligosaccharide biosynthetic process (GO:0010325);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: floral organ morphogenesis (GO:0048444);; Biological Process: regulation of shoot system development (GO:0048831);; ","K14495|1.57023e-97|brp:103861839|K14495 F-box protein GID2 | (RefSeq) F-box protein GID2","Plant hormone signal transduction (ko04075)","--","--","F-box domain;; F-box-like","F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1","S","Function unknown","PREDICTED: F-box protein GID2 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; cellular component: macromolecular complex (GO:0032991)"]
["Bra008695","Bra008695",638.935913,59624,369.821411,34827,362.341797,31280,381.613129,25194,216.723083,13773,202.036972,12920,0.000459467879732887,-1.27247649735632,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: UDP-glucose 6-dehydrogenase activity (GO:0003979);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: UDP-glucuronate biosynthetic process (GO:0006065);; Biological Process: Golgi organization (GO:0007030);; Biological Process: vacuole organization (GO:0007033);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: D-xylose metabolic process (GO:0042732);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: NAD binding (GO:0051287);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00012|0|brp:103846408|K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] | (RefSeq) UDP-glucose 6-dehydrogenase 3-like","Pentose and glucuronate interconversions (ko00040);; Ascorbate and aldarate metabolism (ko00053);; Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[GT]","Carbohydrate transport and metabolism;; Signal transduction mechanisms","UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain;; UDP-glucose/GDP-mannose dehydrogenase family, central domain","UDP-glucose 6-dehydrogenase 3 OS=Arabidopsis thaliana OX=3702 GN=UGD3 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-glucose 6-dehydrogenase 3-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; molecular function: binding (GO:0005488)"]
["Bra030793","Bra030793",4.824018,262,2.465945,135,2.973372,149,11.703526,449,10.534029,389,9.948761,370,0.000383097420094688,1.10453266943447,"up","--","--","Molecular Function: double-stranded RNA binding (GO:0003725);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Cellular Component: nuclear dicing body (GO:0010445);; Biological Process: leaf proximal/distal pattern formation (GO:0010589);; Cellular Component: Cajal body (GO:0015030);; Biological Process: pre-miRNA processing (GO:0031054);; Molecular Function: miRNA binding (GO:0035198);; Biological Process: mRNA cleavage involved in gene silencing by miRNA (GO:0035279);; Biological Process: defense response to virus (GO:0051607);; Biological Process: production of siRNA involved in chromatin silencing by small RNA (GO:0070919);; ","--","--","--","--","Double-stranded RNA binding motif;; double strand RNA binding domain from DEAD END PROTEIN 1","Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1","S","Function unknown","PREDICTED: double-stranded RNA-binding protein 1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra008268","Bra008268",6.004144,200,8.056455,270,9.345479,287,0.414563,10,0,0,0,0,{"v":2.04209802879537e-07,"d":"2.04E-07"},-5.00384417721626,"down","[T]","Signal transduction mechanisms","Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: regulation of innate immune response (GO:0045088);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: defense response by callose deposition (GO:0052542);; ","K13448|1.99701e-119|brp:103853037|K13448 calcium-binding protein CML | (RefSeq) calcium-binding protein CML39-like","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF-hand domain pair;; EF-hand domain pair;; EF hand;; EF hand;; EF-hand domain;; Cytoskeletal-regulatory complex EF hand","Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calcium-binding protein CML39-like [Brassica rapa] ","biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: localization (GO:0051179)"]
["Bra017238","Bra017238",29.838364,2196,23.755798,1588,31.910905,2130,17.988775,910,14.755411,718,14.65028,715,{"v":6.64323620720135e-09,"d":"6.64E-09"},-1.3779354038892,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: microtubule nucleation (GO:0007020);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to auxin (GO:0009733);; ","--","--","--","--","Transcriptional activator","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103865544 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896)"]
["Bra016234","Bra016234",98.282036,12413,118.226662,15069,130.406784,15237,9.996052,894,2.779734,240,4.900277,425,{"v":2.55354970014305e-22,"d":"2.55E-22"},-4.64993806402511,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: pollen development (GO:0009555);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: seed germination (GO:0009845);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: detection of stimulus (GO:0051606);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: regulation of stomatal closure (GO:0090333);; Biological Process: negative regulation of defense response to bacterium (GO:1900425);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Legume lectin domain","Putative L-type lectin-domain containing receptor kinase V.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK52 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: putative L-type lectin-domain containing receptor kinase V.2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra002307","Bra002307",2.211613,124,2.073881,121,2.459145,129,13.131669,523,13.48264,524,14.514057,585,{"v":7.77285032273865e-20,"d":"7.77E-20"},2.05046029344681,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: mitotic cell cycle (GO:0007067);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: chromatin organization (GO:0016568);; Molecular Function: methylated histone binding (GO:0035064);; Biological Process: positive regulation of translation (GO:0045727);; Biological Process: root hair elongation (GO:0048767);; Biological Process: metal ion homeostasis (GO:0055065);; Biological Process: cellular response to salt stress (GO:0071472);; ","--","--","[R]","General function prediction only","Alfin;; PHD-finger","PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1","S","Function unknown","PREDICTED: PHD finger protein ALFIN-LIKE 5 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra010304","Bra010304",2.166535,148,7.441926,509,8.231155,516,1.587037,77,0.419501,21,0.274208,13,{"v":6.2229303656277e-05,"d":"6.22E-05"},-3.12820115258171,"down","[IR]","Lipid transport and metabolism;; General function prediction only","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to zinc ion (GO:0010043);; Molecular Function: lipase activity (GO:0016298);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair cell differentiation (GO:0048765);; Molecular Function: cutinase activity (GO:0050525);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: pollen tube (GO:0090406);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana OX=3702 GN=At4g30140 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: GDSL esterase/lipase At4g30140-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra023879","Bra023879",0.297887,23,0.288766,23,0.309688,22,4.665971,254,3.186035,167,4.480752,236,{"v":5.15903441116256e-17,"d":"5.16E-17"},3.1367676085411,"up","--","--","Biological Process: polar nucleus fusion (GO:0010197);; ","--","--","--","--","NYN domain","--","--","--","BnaA01g25060D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra004161","Bra004161",2.39405,103,2.098466,96,2.807135,96,7.197439,205,11.704477,304,8.331178,242,{"v":4.7319584542162e-05,"d":"4.73E-05"},1.2765477841702,"up","--","--","Molecular Function: phospholipid binding (GO:0005543);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting (GO:0006605);; Molecular Function: GTPase activator activity (GO:0008060);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: protein secretion (GO:0009306);; Biological Process: pollen development (GO:0009555);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: cellular component organization (GO:0016043);; Biological Process: vesicle-mediated transport (GO:0016192);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","[R]","General function prediction only","C2 domain","Protein C2-DOMAIN ABA-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=CAR2 PE=3 SV=1","S","Function unknown","PREDICTED: protein C2-DOMAIN ABA-RELATED 2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra036048","Bra036048",8.71165,452,9.597464,502,4.666785,224,4.536843,167,4.594409,163,2.730462,97,0.000818767473209767,-1.44958168081017,"down","--","--","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: transcription coactivator activity (GO:0003713);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: pollen tube guidance (GO:0010183);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of synergid differentiation (GO:0045697);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: organic substance transport (GO:0071702);; Biological Process: nitrogen compound transport (GO:0071705);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);; ","K09422|2.33563e-170|brp:103840922|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB44-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor MYB44-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: protein binding transcription factor activity (GO:0000988);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: signaling (GO:0023052);; biological process: locomotion (GO:0040011);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra040893","Bra040893",0.017514,2,0,0,0.089576,5,0.781827,40,3.441159,220,2.046786,120,{"v":6.16427473711504e-07,"d":"6.16E-07"},4.61052832861996,"up","[H]","Coenzyme transport and metabolism","Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Molecular Function: homogentisate prenyltransferase activity (GO:0010354);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: cell differentiation (GO:0030154);; Biological Process: bacteriochlorophyll biosynthetic process (GO:0030494);; Cellular Component: chloroplast membrane (GO:0031969);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: chlorophyll synthetase activity (GO:0046408);; ","K04040|0|brp:103848641|K04040 chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] | (RefSeq) chlorophyll synthase, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","--","--","UbiA prenyltransferase family","Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLG PE=2 SV=1","H","Coenzyme transport and metabolism","PREDICTED: chlorophyll synthase, chloroplastic [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Bra002815","Bra002815",38.935825,4843,32.012716,4037,34.213924,3961,19.424412,1723,17.898597,1523,19.336282,1651,{"v":7.27948854566451e-35,"d":"7.28E-35"},-1.4340057253163,"down","[T]","Signal transduction mechanisms","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Probable serine/threonine-protein kinase PBL16 OS=Arabidopsis thaliana OX=3702 GN=PBL16 PE=1 SV=1","T","Signal transduction mechanisms","BnaA10g10710D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra019437","Bra019437",0.227135,9,0.512242,19,0.481033,16,2.861723,73,4.494806,110,3.993351,98,{"v":1.00743157297133e-05,"d":"1.01E-05"},2.45838432379843,"up","--","--","Biological Process: response to desiccation (GO:0009269);; ","--","--","--","--","Late embryogenesis abundant protein","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873645 [Brassica rapa] ","biological process: response to stimulus (GO:0050896)"]
["Bra008011","Bra008011",25.093684,3868,46.000769,7001,46.771588,7129,27.510971,2925,14.826965,1413,9.704654,1196,0.000388824575858262,-1.72759841055824,"down","[E]","Amino acid transport and metabolism","Molecular Function: transporter activity (GO:0005215);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cation transport (GO:0006812);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to nematode (GO:0009624);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: pollen tube growth (GO:0009860);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Molecular Function: high-affinity oligopeptide transporter activity (GO:0015334);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: dipeptide transporter activity (GO:0042936);; Molecular Function: tripeptide transporter activity (GO:0042937);; Biological Process: dipeptide transport (GO:0042938);; Biological Process: tripeptide transport (GO:0042939);; Biological Process: response to leucine (GO:0043201);; Biological Process: intracellular transport (GO:0046907);; Biological Process: response to histidine (GO:0080052);; Biological Process: response to phenylalanine (GO:0080053);; ","K14638|0|pop:POPTR_0019s10860g|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) POPTRDRAFT_914816; proton-dependent oligopeptide transport family protein","--","[E]","Amino acid transport and metabolism","POT family;; Major Facilitator Superfamily","Protein NRT1/ PTR FAMILY 5.12 OS=Arabidopsis thaliana OX=3702 GN=NPF5.12 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: uncharacterized protein LOC109175999 [Ipomoea nil]","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra017031","Bra017031",6.903734,226,30.51951,1004,13.121737,396,5.159728,119,6.493503,145,2.41436,54,0.000914166616987381,-2.24721159373327,"down","--","--","Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","Pollen proteins Ole e I like","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103865767 isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576)"]
["Bra004841","Bra004841",39.824505,5522,79.600082,11138,82.503464,10583,19.945047,1957,9.833218,929,9.966057,947,{"v":1.53979339878987e-09,"d":"1.54E-09"},-2.8150294028421,"down","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; ","--","--","--","--","GDP-fucose protein O-fucosyltransferase","O-fucosyltransferase 20 OS=Brassica napus OX=3708 GN=OFUT20 PE=2 SV=2","S","Function unknown","BnaC04g03810D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra031965","Bra031965",25.992043,1227,2.534628,127,4.161023,193,0.504078,19,0.449499,15,0.409466,18,{"v":2.37885408776457e-08,"d":"2.38E-08"},-4.277278127833,"down","[P]","Inorganic ion transport and metabolism","Biological Process: sulfate assimilation (GO:0000103);; Molecular Function: adenylylsulfate kinase activity (GO:0004020);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytosol (GO:0005829);; Biological Process: tryptophan catabolic process (GO:0006569);; Cellular Component: chloroplast (GO:0009507);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: phosphorylation (GO:0016310);; Biological Process: cysteine biosynthetic process (GO:0019344);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: male gamete generation (GO:0048232);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: hydrogen sulfide biosynthetic process (GO:0070814);; ","K00860|3.67988e-148|brp:103855196|K00860 adenylylsulfate kinase [EC:2.7.1.25] | (RefSeq) adenylyl-sulfate kinase 3","Purine metabolism (ko00230);; Sulfur metabolism (ko00920)","[P]","Inorganic ion transport and metabolism","Adenylylsulphate kinase","Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana OX=3702 GN=APK3 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: adenylyl-sulfate kinase 3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra027073","Bra027073",380.74914,44776,476.529829,58528,451.071294,51735,111.521939,10334,76.459195,7166,70.932335,6914,{"v":5.63476068131443e-23,"d":"5.63E-23"},-2.70101041225931,"down","[V]","Defense mechanisms","Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: purine nucleobase transport (GO:0006863);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: response to chitin (GO:0010200);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Biological Process: cadmium ion transport (GO:0015691);; Biological Process: proline transport (GO:0015824);; Biological Process: sequestering of metal ion (GO:0051238);; Biological Process: response to karrikin (GO:0080167);; ","K03327|0|brp:103838428|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 37","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 37 OS=Arabidopsis thaliana OX=3702 GN=DTX37 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 37 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; cellular component: organelle part (GO:0044422);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007)"]
["Bra027671","Bra027671",0.643398,19,0.916264,31,0.781072,32,3.018872,71,5.107008,150,5.956568,140,0.000639438607915635,1.94882143432561,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 15 OS=Arabidopsis thaliana OX=3702 GN=HIPP15 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103838241 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000583","Bra000583",2.165474,236,1.633046,203,1.52441,169,1.161775,79,0.972944,91,0.651849,50,{"v":4.57407962135328e-05,"d":"4.57E-05"},-1.47425935102381,"down","[V]","Defense mechanisms","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: MAPK cascade (GO:0000165);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to nematode (GO:0009624);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 46, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX46 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 46, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; cellular component: organelle part (GO:0044422);; molecular function: transporter activity (GO:0005215)"]
["Bra002828","Bra002828",5.454825,724,4.550589,643,4.635992,617,16.641612,1617,18.417732,1738,19.253406,1825,{"v":6.41963989276949e-20,"d":"6.42E-20"},1.33176629987136,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: pollen germination (GO:0009846);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: response to organonitrogen compound (GO:0010243);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: cellular component organization (GO:0016043);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: establishment of cell polarity (GO:0030010);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: innate immune response (GO:0045087);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: lateral root development (GO:0048527);; ","K18835|0|bna:106418234|K18835 WRKY transcription factor 2 | (RefSeq) WRKY2; probable WRKY transcription factor 2","Plant-pathogen interaction (ko04626)","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=WRKY2 PE=1 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 2 [Brassica oleracea var. oleracea] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376)"]
["Bra033146","Bra033146",79.113274,5741,23.438601,1717,15.667907,1052,1.6118,83,0,0,0.040769,3,0.00841685660968686,-3.3051902142421,"down","[O]","Posttranslational modification, protein turnover, chaperones","Cellular Component: plant-type vacuole (GO:0000325);; Molecular Function: cysteine-type endopeptidase activity (GO:0004197);; Molecular Function: phospholipase A2 activity (GO:0004623);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: cytosol (GO:0005829);; Biological Process: glycolytic process (GO:0006096);; Biological Process: proteolysis (GO:0006508);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: programmed cell death involved in cell development (GO:0010623);; Biological Process: chlorophyll catabolic process (GO:0015996);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Papain family cysteine protease;; Cathepsin propeptide inhibitor domain (I29)","Probable cysteine protease RDL5 OS=Arabidopsis thaliana OX=3702 GN=RDL5 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable cysteine protease RDL4 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; cellular component: extracellular region (GO:0005576);; biological process: multi-organism process (GO:0051704)"]
["Bra019593","Bra019593",3.302883,584,6.618845,1246,6.942755,1156,2.140258,349,2.41749,352,3.443993,430,0.000888091548747065,-1.4460816995033,"down","[T]","Signal transduction mechanisms","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: actin binding (GO:0003779);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: signal transducer, downstream of receptor, with serine/threonine kinase activity (GO:0004702);; Molecular Function: calcium-dependent protein serine/threonine phosphatase activity (GO:0004723);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: Arp2/3 protein complex (GO:0005885);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: amino acid transport (GO:0006865);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: leaf senescence (GO:0010150);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: heat acclimation (GO:0010286);; Biological Process: protein desumoylation (GO:0016926);; Molecular Function: protein phosphatase binding (GO:0019903);; Biological Process: actin filament polymerization (GO:0030041);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","K00924|0|brp:103873490|K00924 [EC:2.7.1.-] | (RefSeq) CDPK-related kinase 6","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Lipopolysaccharide kinase (Kdo/WaaP) family;; Phosphotransferase enzyme family","CDPK-related kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: CDPK-related kinase 6 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra036815","Bra036815",0.928916,97,3.55349,377,3.348782,311,0.148715,12,0.052484,5,0.051028,4,{"v":2.85601656787909e-11,"d":"2.86E-11"},-4.79260731794575,"down","--","--","Biological Process: proteolysis (GO:0006508);; Biological Process: amino acid transport (GO:0006865);; Biological Process: defense response (GO:0006952);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Molecular Function: hydrolase activity (GO:0016787);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor N-terminal;; Xylanase inhibitor C-terminal;; Eukaryotic aspartyl protease","Aspartyl protease family protein 1 OS=Arabidopsis thaliana OX=3702 GN=APF1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: aspartyl protease family protein 1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra019753","Bra019753",1.702833,158,5.191757,494,5.000197,430,0.11919,9,0,0,0,0,{"v":1.45033522748622e-08,"d":"1.45E-08"},-5.48623185738749,"down","--","--","Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: ion transport (GO:0006811);; Biological Process: defense response (GO:0006952);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","--","--","[T]","Signal transduction mechanisms","--","Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana OX=3702 GN=At1g12290 PE=3 SV=1","S","Function unknown","PREDICTED: probable disease resistance protein At1g12290 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra015472","Bra015472",1.072484,65,2.481744,157,2.869782,162,0.092229,6,0,0,0,0,{"v":1.10205456088165e-06,"d":"1.10E-06"},-4.7665492103563,"down","[I]","Lipid transport and metabolism","Biological Process: long-chain fatty acid metabolic process (GO:0001676);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: transporter activity (GO:0005215);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: very long-chain fatty acid biosynthetic process (GO:0042761);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","[I]","Lipid transport and metabolism","Fatty acid desaturase","Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=ADS1 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: delta-9 acyl-lipid desaturase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra025375","Bra025375",15.389376,903,14.925367,884,11.525164,626,7.596234,316,1.25616,51,2.775509,113,0.000490957588620602,-2.21624359440603,"down","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: RNA splicing (GO:0008380);; Biological Process: mRNA metabolic process (GO:0016071);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular part (GO:0044424);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: xylan metabolic process (GO:0045491);; ","--","--","--","--","--","Uncharacterized protein At5g39570 OS=Arabidopsis thaliana OX=3702 GN=At5g39570 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At5g39570 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra039157","Bra039157",6.64625,359,12.004869,654,9.413593,470,1.043733,40,0.197572,8,0.271127,11,{"v":6.47054340216916e-12,"d":"6.47E-12"},-4.37472154108024,"down","--","--","Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of starch biosynthetic process (GO:0010581);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","--","--","TPL-binding domain in jasmonate signalling;; Ethylene-responsive binding factor-associated repression","Ninja-family protein AFP4 OS=Arabidopsis thaliana OX=3702 GN=AFP4 PE=1 SV=1","K","Transcription","PREDICTED: ninja-family protein AFP4 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052)"]
["Bra011986","Bra011986",17.466499,5875,13.433422,4484,15.428376,4797,7.89308,1861,6.706345,1481,7.291917,1619,{"v":9.48356344979868e-25,"d":"9.48E-25"},-1.65001788811253,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Molecular Function: hedgehog receptor activity (GO:0008158);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cholesterol transport (GO:0030301);; ","K12385|0|brp:103829698|K12385 Niemann-Pick C1 protein | (RefSeq) Niemann-Pick C1 protein-like","--","[I]","Lipid transport and metabolism","Patched family;; Niemann-Pick C1 N terminus;; Sterol-sensing domain of SREBP cleavage-activation","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: Niemann-Pick C1 protein-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; cellular component: cell junction (GO:0030054);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)"]
["Bra006781","Bra006781",4.902144,737,5.790674,878,5.497562,764,4.053597,431,3.173024,325,1.719184,177,0.000712580053654651,-1.37770833838988,"down","[K]","Transcription","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to stress (GO:0006950);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: response to hormone (GO:0009725);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: tissue development (GO:0009888);; Biological Process: cell growth (GO:0016049);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular component morphogenesis (GO:0032989);; Molecular Function: signaling receptor activity (GO:0038023);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism transport (GO:0044765);; Biological Process: stamen development (GO:0048443);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Protein tyrosine kinase;; Protein kinase domain;; Leucine Rich repeat;; Leucine Rich Repeat","Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana OX=3702 GN=At5g58150 PE=2 SV=1","S","Function unknown","PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra016787","Bra016787",0.128421,13,0.042872,5,0.023384,3,0.879323,59,1.421765,63,1.150986,75,{"v":5.25026093325185e-06,"d":"5.25E-06"},2.97924289804298,"up","[P]","Inorganic ion transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: N,N-dimethylaniline monooxygenase activity (GO:0004499);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process from homomethionine (GO:0033506);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: innate immune response (GO:0045087);; Biological Process: shoot system development (GO:0048367);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Molecular Function: NADP binding (GO:0050661);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: 3-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080102);; Molecular Function: 4-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080103);; Molecular Function: 5-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080104);; Molecular Function: 6-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080105);; Molecular Function: 7-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080106);; Molecular Function: 8-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080107);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Flavin-binding monooxygenase-like;; Pyridine nucleotide-disulphide oxidoreductase;; Pyridine nucleotide-disulphide oxidoreductase;; FAD dependent oxidoreductase;; NAD(P)-binding Rossmann-like domain;; FAD-NAD(P)-binding;; FAD binding domain;; L-lysine 6-monooxygenase (NADPH-requiring);; HI0933-like protein;; Flavin containing amine oxidoreductase","Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana OX=3702 GN=FMOGS-OX5 PE=1 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: flavin-containing monooxygenase FMO GS-OX5 isoform X1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra040801","Bra040801",22.209862,2172,41.078156,4054,39.581734,3581,24.333851,1684,20.223736,1347,22.55691,1512,0.00153786439253152,-1.17026459127047,"down","[P]","Inorganic ion transport and metabolism","Biological Process: response to hypoxia (GO:0001666);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: lateral root formation (GO:0010311);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: high-affinity secondary active ammonium transmembrane transporter activity (GO:0015398);; Biological Process: organic cation transport (GO:0015695);; Biological Process: basic amino acid transport (GO:0015802);; Biological Process: methylammonium transport (GO:0015843);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Biological Process: protein polymerization (GO:0051258);; Biological Process: ammonium transmembrane transport (GO:0072488);; Biological Process: response to karrikin (GO:0080167);; Biological Process: lateral root branching (GO:0080181);; ","K03320|0|brp:103849623|K03320 ammonium transporter, Amt family | (RefSeq) ammonium transporter 1 member 1","--","[P]","Inorganic ion transport and metabolism","Ammonium Transporter Family","Ammonium transporter 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=AMT1-1 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: ammonium transporter 1 member 1 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Bra007293","Bra007293",1.021174,75,0.63477,47,0.792773,54,2.851319,147,6.072366,299,3.923993,195,{"v":5.42240592783552e-05,"d":"5.42E-05"},1.77253656912915,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to sucrose (GO:0009744);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: alkaloid biosynthetic process (GO:0009821);; Biological Process: response to UV-B (GO:0010224);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: strictosidine synthase activity (GO:0016844);; ","--","--","[R]","General function prediction only","Strictosidine synthase;; SMP-30/Gluconolaconase/LRE-like region","Protein STRICTOSIDINE SYNTHASE-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=SSL9 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 9 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra006816","Bra006816",30.612264,1952,35.233235,2267,36.339988,2129,21.872659,964,6.487455,275,9.229115,395,0.00011110938941802,-1.9442649099859,"down","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein glycosylation (GO:0006486);; Molecular Function: galactosyltransferase activity (GO:0008378);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","[G]","Carbohydrate transport and metabolism","Galactosyltransferase","Hydroxyproline O-galactosyltransferase GALT3 OS=Arabidopsis thaliana OX=3702 GN=GALT3 PE=2 SV=1","S","Function unknown","PREDICTED: beta-1,3-galactosyltransferase 6 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra000430","Bra000430",26.230515,606,29.85412,696,30.07464,643,9.078056,149,21.081062,332,17.08317,271,0.0005457668680889,-1.38995379887161,"down","--","--","Molecular Function: copper ion binding (GO:0005507);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: trichome branching (GO:0010091);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: enzyme regulator activity (GO:0030234);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: organelle localization (GO:0051640);; ","--","--","[ZD]","Cytoskeleton;; Cell cycle control, cell division, chromosome partitioning","EF-hand domain pair","Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calcium-binding protein KIC-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: enzyme regulator activity (GO:0030234);; biological process: localization (GO:0051179)"]
["Bra039030","Bra039030",6.828688,1280,2.201268,417,2.06565,381,15.444839,2064,18.184089,2321,20.378466,2622,0.000249001139271772,1.71059653288716,"up","--","--","Molecular Function: RNA-directed 5'-3' RNA polymerase activity (GO:0003968);; Biological Process: cell communication (GO:0007154);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to virus (GO:0009615);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: seed germination (GO:0009845);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: RNA interference (GO:0016246);; Biological Process: posttranscriptional gene silencing (GO:0016441);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: lipid storage (GO:0019915);; Biological Process: reproductive process (GO:0022414);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single organism signaling (GO:0044700);; Biological Process: innate immune response (GO:0045087);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ development (GO:0048513);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: response to freezing (GO:0050826);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; Biological Process: regulation of primary metabolic process (GO:0080090);; ","K11699|0|brp:103828268|K11699 RNA-dependent RNA polymerase [EC:2.7.7.48] | (RefSeq) probable RNA-dependent RNA polymerase 5","--","[A]","RNA processing and modification","RNA dependent RNA polymerase","Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana OX=3702 GN=RDR5 PE=2 SV=2","K","Transcription","PREDICTED: probable RNA-dependent RNA polymerase 5 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376)"]
["Bra032755","Bra032755",17.246727,2036,44.799468,5334,37.278193,4062,10.954015,915,5.382339,401,5.397199,437,{"v":2.40575095629912e-07,"d":"2.41E-07"},-2.67242866420453,"down","[R]","General function prediction only","Biological Process: sulfate assimilation (GO:0000103);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Molecular Function: selenium binding (GO:0008430);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: polar nucleus fusion (GO:0010197);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: cellular response to selenium ion (GO:0071291);; ","K17285|0|brp:103863571|K17285 selenium-binding protein 1 | (RefSeq) selenium-binding protein 1-like","--","[P]","Inorganic ion transport and metabolism","56kDa selenium binding protein (SBP56)","Selenium-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=SBP1 PE=1 SV=1","S","Function unknown","PREDICTED: selenium-binding protein 1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra012797","Bra012797",1.019782,231,1.667065,441,2.041053,427,0.059915,12,0.068141,14,0,0,{"v":4.06066739304526e-09,"d":"4.06E-09"},-4.76572406764732,"down","[T]","Signal transduction mechanisms","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: cellular metal ion homeostasis (GO:0006875);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: membrane fusion (GO:0006944);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: pollen germination (GO:0009846);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: auxin polar transport (GO:0009926);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: pollen maturation (GO:0010152);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);; Biological Process: cadmium ion transport (GO:0015691);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Molecular Function: cation-transporting ATPase activity (GO:0019829);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of MAP kinase activity (GO:0043407);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: root development (GO:0048364);; Biological Process: stem cell fate determination (GO:0048867);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: cellular response to indolebutyric acid stimulus (GO:0071366);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC-2 type transporter;; ABC transporter;; Plant PDR ABC transporter associated;; AAA domain, putative AbiEii toxin, Type IV TA system;; ABC-transporter extracellular N-terminal;; ATPase family associated with various cellular activities (AAA)","ABC transporter G family member 42 OS=Arabidopsis thaliana OX=3702 GN=ABCG42 PE=2 SV=1","V","Defense mechanisms","PREDICTED: ABC transporter G family member 42-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215);; molecular function: catalytic activity (GO:0003824)"]
["Brassica_rapa_newGene_29951","--",0.721822,96,0.899782,120,0.933914,115,0.222328,21,0.02254,3,0.086467,8,{"v":1.19819386938879e-05,"d":"1.20E-05"},-3.12496449907299,"down","--","--","--","--","--","--","--","--","Uncharacterized protein At4g04775 OS=Arabidopsis thaliana OX=3702 GN=At4g04775 PE=2 SV=1","--","--","uncharacterized protein At4g04775-like [Brassica napus] ","--"]
["Bra001117","Bra001117",6.525041,487,4.335676,349,2.055232,154,14.741216,930,14.806748,855,17.307066,917,0.000495005164337098,1.40580455313003,"up","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: iron ion transport (GO:0006826);; Biological Process: nitric oxide mediated signal transduction (GO:0007263);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: pollen development (GO:0009555);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: nitrate transport (GO:0015706);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain;; Plant zinc cluster domain","Probable WRKY transcription factor 39 OS=Arabidopsis thaliana OX=3702 GN=WRKY39 PE=2 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 39 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra037722","Bra037722",21.036469,694,48.103207,1601,38.363014,1171,10.243178,240,6.39136,144,3.7095,84,{"v":6.73922159839078e-08,"d":"6.74E-08"},-2.83489067262399,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: root hair elongation (GO:0048767);; ","K13448|1.47111e-110|brp:103873524|K13448 calcium-binding protein CML | (RefSeq) calmodulin-like protein 5","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain pair;; EF hand;; EF-hand domain;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region","Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calmodulin-like protein 5 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra032056","Bra032056",4.558129,358,7.309357,691,8.10091,611,5.56169,219,4.633381,300,4.303769,230,0.00542131272439329,-1.19597660188803,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: plastid (GO:0009536);; Molecular Function: heat shock protein binding (GO:0031072);; Molecular Function: unfolded protein binding (GO:0051082);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103864590 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra026082","Bra026082",1.797171,147,1.549814,130,0.846685,92,1.046105,78,0.669382,53,0.644922,54,0.00766795124107126,-1.01063864725689,"down","--","--","Molecular Function: RNA polymerase II transcription factor activity, sequence-specific DNA binding (GO:0000981);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: regulation of glycolytic process (GO:0006110);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of transcription from RNA polymerase II promoter (GO:0006357);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of floral meristem growth (GO:0010080);; Biological Process: xylem development (GO:0010089);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: maintenance of shoot apical meristem identity (GO:0010492);; Biological Process: triglyceride biosynthetic process (GO:0019432);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: organ growth (GO:0035265);; Biological Process: regulation of growth (GO:0040008);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: positive regulation of fatty acid biosynthetic process (GO:0045723);; Biological Process: seed development (GO:0048316);; Biological Process: root development (GO:0048364);; Biological Process: plant ovule development (GO:0048481);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: leaf phyllotactic patterning (GO:0060772);; Biological Process: auxin mediated signaling pathway involved in phyllotactic patterning (GO:0060774);; Biological Process: positive regulation of cutin biosynthetic process (GO:1901959);; ","K09285|0|brp:103872406|K09285 AP2-like factor, ANT lineage | (RefSeq) AP2-like ethylene-responsive transcription factor At1g16060","--","--","--","AP2 domain","AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1","K","Transcription","PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: reproduction (GO:0000003);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: signaling (GO:0023052)"]
["Bra010405","Bra010405",1.912286,293,3.970057,686,3.744887,615,0.023777,4,0.543253,87,0.784034,75,0.000868838133884123,-2.87911594077635,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism metabolic process (GO:0044710);; Molecular Function: naringenin 3-dioxygenase activity (GO:0045486);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to stimulus (GO:0050896);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Phloem protein 2","Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=DMR6 PE=1 SV=1","S","Function unknown","PREDICTED: protein DOWNY MILDEW RESISTANCE 6-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra030674","Bra030674",11.919207,370,20.334091,637,9.762564,281,3.370672,75,1.373442,30,1.127044,24,{"v":2.49982947242188e-08,"d":"2.50E-08"},-3.18250258404851,"down","--","--","Molecular Function: RNA binding (GO:0003723);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: mRNA processing (GO:0006397);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to metal ion (GO:0010038);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: carotenoid metabolic process (GO:0016116);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cytosolic transport (GO:0016482);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: histone lysine methylation (GO:0034968);; Biological Process: regulation of programmed cell death (GO:0043067);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: DNA binding (GO:0043566);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism transport (GO:0044765);; Biological Process: innate immune response (GO:0045087);; Biological Process: gametophyte development (GO:0048229);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: phyllome development (GO:0048827);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: negative regulation of developmental process (GO:0051093);; Biological Process: organic substance transport (GO:0071702);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","--","--","--","--","BnaA08g28870D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra033482","Bra033482",144.723679,3005,200.966843,4210,211.52298,4062,76.621094,1126,23.382204,331,35.896206,511,{"v":4.96457973117233e-07,"d":"4.96E-07"},-2.49116828506136,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At4g14450, chloroplastic [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra011942","Bra011942",0.943197,43,0.567975,27,0.886495,38,4.09971,132,4.319624,134,4.766036,149,{"v":3.05238890961113e-07,"d":"3.05E-07"},1.8535304010867,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: proximal/distal pattern formation (GO:0009954);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: xylem development (GO:0010089);; Biological Process: organ boundary specification between lateral organs and the meristem (GO:0010199);; Cellular Component: membrane (GO:0016020);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: petal development (GO:0048441);; ","--","--","--","--","Lateral organ boundaries (LOB) domain","LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2","S","Function unknown","PREDICTED: LOB domain-containing protein 11-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414)"]
["Bra025219","Bra025219",0,0,0,0,0.0552,5,0.826324,56,4.797886,317,3.620982,237,{"v":2.04601483246553e-07,"d":"2.05E-07"},5.15998450961288,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: argininosuccinate lyase activity (GO:0004056);; Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (GO:0004365);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytosol (GO:0005829);; Biological Process: glycolytic process (GO:0006096);; Biological Process: rRNA processing (GO:0006364);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Cellular Component: stromule (GO:0010319);; Cellular Component: membrane (GO:0016020);; Biological Process: reductive pentose-phosphate cycle (GO:0019253);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity (GO:0047100);; Cellular Component: apoplast (GO:0048046);; Biological Process: anther wall tapetum development (GO:0048658);; Molecular Function: NADP binding (GO:0050661);; Molecular Function: NAD binding (GO:0051287);; Biological Process: primary root development (GO:0080022);; Biological Process: amino acid homeostasis (GO:0080144);; ","K05298|0|brp:103875281|K05298 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13] | (RefSeq) glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic","Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain;; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain","Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAPA1 PE=1 SV=3","G","Carbohydrate transport and metabolism","BnaA06g32740D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576);; biological process: reproductive process (GO:0022414)"]
["Bra004746","Bra004746",57.800683,4175,88.037917,6259,93.220873,6073,63.200804,3021,13.696695,747,14.180888,723,0.00288122653573577,-1.84338878233248,"down","[R]","General function prediction only","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to low fluence blue light stimulus by blue low-fluence system (GO:0010244);; Biological Process: nitrate transport (GO:0015706);; Biological Process: petal morphogenesis (GO:0048446);; ","K06911|0|brp:103866697|K06911 uncharacterized protein | (RefSeq) pirin-like protein 2","--","--","--","Pirin C-terminal cupin domain;; Pirin","Pirin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PRN2 PE=1 SV=3","S","Function unknown","PREDICTED: pirin-like protein 2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra012752","Bra012752",46.502253,3832,111.422267,9165,126.30479,9027,24.426584,1268,9.262725,493,8.496517,464,{"v":4.87306134999237e-09,"d":"4.87E-09"},-3.22887257688854,"down","--","--","Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: water transport (GO:0006833);; Molecular Function: sucrose transmembrane transporter activity (GO:0008515);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to fructose (GO:0009750);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: leaf senescence (GO:0010150);; Biological Process: sucrose transport (GO:0015770);; Molecular Function: sugar transmembrane transporter activity (GO:0051119);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to salicylic acid stimulus (GO:0071446);; Biological Process: cellular response to osmotic stress (GO:0071470);; Biological Process: fructose export from vacuole to cytoplasm (GO:1902334);; ","K15382|1.29928e-172|brp:103860813|K15382 solute carrier family 50 (sugar transporter) | (RefSeq) bidirectional sugar transporter SWEET17","--","[R]","General function prediction only","Sugar efflux transporter for intercellular exchange","Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana OX=3702 GN=SWEET17 PE=1 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: bidirectional sugar transporter SWEET17 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414)"]
["Bra028390","Bra028390",1.573398,216,4.765993,660,4.779818,607,1.01838,99,0.870867,82,1.120941,106,{"v":1.79719112961315e-05,"d":"1.80E-05"},-2.34630316208308,"down","--","--","Biological Process: tryptophan biosynthetic process (GO:0000162);; Biological Process: nuclear-transcribed mRNA catabolic process (GO:0000956);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein glycosylation (GO:0006486);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to salt stress (GO:0009651);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: response to jasmonic acid (GO:0009753);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to chitin (GO:0010200);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","--","--","GRAS domain family","Scarecrow-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1","K","Transcription","PREDICTED: scarecrow-like protein 33 isoform X3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052)"]
["Bra007740","Bra007740",6.044748,213,5.778583,205,2.705031,88,14.164722,352,20.757677,497,19.199766,462,0.00136085574378006,1.31731854628199,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plastid (GO:0009536);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842130 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra039820","Bra039820",0.549528,67,1.097133,135,1.076921,122,0.164228,15,0,0,0,0,0.00718310878003906,-3.11616311432993,"down","--","--","Molecular Function: signal transducer activity (GO:0004871);; Cellular Component: late endosome (GO:0005770);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: pattern specification process (GO:0007389);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to blue light (GO:0009637);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: xylem development (GO:0010089);; Biological Process: inflorescence development (GO:0010229);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: apical protein localization (GO:0045176);; Biological Process: meristem development (GO:0048507);; Biological Process: cotyledon development (GO:0048825);; ","--","--","--","--","NPH3 family;; BTB/POZ domain","BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1","S","Function unknown","PREDICTED: BTB/POZ domain-containing protein NPY2 [Brassica rapa]","molecular function: molecular transducer activity (GO:0060089);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152)"]
["Bra016085","Bra016085",1.043032,104,2.075843,197,2.130508,186,0.181021,14,0.057231,5,0,0,{"v":5.297530143302e-06,"d":"5.30E-06"},-4.02261998392711,"down","[E]","Amino acid transport and metabolism","--","K14638|0|brp:103831721|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 5.11-like","--","[E]","Amino acid transport and metabolism","POT family;; Major Facilitator Superfamily","Protein NRT1/ PTR FAMILY 5.11 OS=Arabidopsis thaliana OX=3702 GN=NPF5.11 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: protein NRT1/ PTR FAMILY 5.11-like isoform X1 [Brassica rapa]","--"]
["Bra007568","Bra007568",0.31463,28,0.301897,28,0.273228,23,1.157724,75,1.037026,64,0.985964,62,0.00305012371843151,1.26030402586491,"up","[EM]","Amino acid transport and metabolism;; Cell wall/membrane/envelope biogenesis","Biological Process: ubiquinone biosynthetic process (GO:0006744);; Molecular Function: 4-hydroxy-tetrahydrodipicolinate synthase (GO:0008840);; Biological Process: lysine biosynthetic process (GO:0009085);; Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Molecular Function: lyase activity (GO:0016829);; Biological Process: diaminopimelate metabolic process (GO:0046451);; ","K01714|3.58298e-176|aly:ARALYDRAFT_486562|K01714 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] | (RefSeq) dihydrodipicolinate synthase 1","Monobactam biosynthesis (ko00261);; Lysine biosynthesis (ko00300);; Biosynthesis of amino acids (ko01230)","--","--","Dihydrodipicolinate synthetase family","4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHDPS1 PE=2 SV=2","--","--","4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000140","Bra000140",4.57375,324,10.711409,722,9.289275,667,1.270312,69,1.688111,169,2.153292,216,0.00144688481419634,-1.88513584304881,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to chitin (GO:0010200);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","--","--","PDDEXK-like family of unknown function","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103857873 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra003190","Bra003190",29.130285,4124,8.030594,1151,7.144684,940,2.087346,210,0.750578,74,1.152305,113,{"v":7.7531897557256e-10,"d":"7.75E-10"},-3.68110003125325,"down","[R]","General function prediction only","Cellular Component: cytoplasm (GO:0005737);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Molecular Function: glyoxalase III activity (GO:0019172);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; ","K18881|0|brp:103829987|K18881 D-lactate dehydratase [EC:4.2.1.130] | (RefSeq) DJ-1 protein homolog F","Pyruvate metabolism (ko00620)","[RV]","General function prediction only;; Defense mechanisms","DJ-1/PfpI family","DJ-1 protein homolog F OS=Arabidopsis thaliana OX=3702 GN=DJ1F PE=1 SV=1","S","Function unknown","PREDICTED: DJ-1 protein homolog F [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra027192","Bra027192",338.287567,6367,238.264389,4525,224.607773,3911,851.532593,11337,789.508911,10119,771.853088,9954,{"v":1.10795365297175e-09,"d":"1.11E-09"},1.04946634773527,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: RNA methylation (GO:0001510);; Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Molecular Function: rRNA binding (GO:0019843);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: ribosome biogenesis (GO:0042254);; Molecular Function: metal ion binding (GO:0046872);; ","K02922|1.38513e-62|brp:103869855|K02922 large subunit ribosomal protein L37e | (RefSeq) 60S ribosomal protein L37-2-like","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein L37e","60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: 60S ribosomal protein L37-2-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra015784","Bra015784",37.703052,4167,36.292441,4046,27.808638,2930,15.179728,1173,13.000959,1012,11.256124,859,{"v":8.89990242027403e-21,"d":"8.90E-21"},-1.90087571147067,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: extracellular region (GO:0005576);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);; Biological Process: circadian rhythm (GO:0007623);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: glucan 1,4-alpha-maltotetraohydrolase activity (GO:0033910);; Molecular Function: cation binding (GO:0043169);; Cellular Component: apoplast (GO:0048046);; ","K01176|0|brp:103832061|K01176 alpha-amylase [EC:3.2.1.1] | (RefSeq) probable alpha-amylase 2","Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Alpha-amylase C-terminal beta-sheet domain;; Alpha amylase, catalytic domain","Probable alpha-amylase 2 OS=Arabidopsis thaliana OX=3702 GN=AMY2 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable alpha-amylase 2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: rhythmic process (GO:0048511);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra011701","Bra011701",89.704399,7458,108.270304,9940,118.327221,9386,56.565163,3726,34.524134,2214,49.314859,2530,{"v":6.19972083444692e-08,"d":"6.20E-08"},-1.70711300719124,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: negative regulation of gene expression (GO:0010629);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Cellular Component: intracellular part (GO:0044424);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: regulation of cell aging (GO:0090342);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K09060|0|brp:103866462|K09060 plant G-box-binding factor | (RefSeq) G-box-binding factor 1","--","--","--","G-box binding protein MFMR;; bZIP transcription factor;; Basic region leucine zipper","G-box-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=GBF1 PE=1 SV=2","K","Transcription","PREDICTED: G-box-binding factor 1 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra011880","Bra011880",55.080866,6104,70.611107,7911,68.033716,7057,15.963507,1348,7.026593,746,11.425706,947,{"v":9.21862289275066e-20,"d":"9.22E-20"},-2.81536200355925,"down","[V]","Defense mechanisms","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: MAPK cascade (GO:0000165);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to nematode (GO:0009624);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[R]","General function prediction only","MatE;; Polysaccharide biosynthesis C-terminal domain","Protein DETOXIFICATION 47, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX47 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 47, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; cellular component: organelle part (GO:0044422);; molecular function: transporter activity (GO:0005215)"]
["Bra010805","Bra010805",6.049292,254,4.07088,172,4.84357,188,17.238449,511,15.315117,437,17.347342,498,{"v":5.20790323738359e-08,"d":"5.21E-08"},1.18625592717043,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Biological Process: autophagy (GO:0006914);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: cell wall modification (GO:0042545);; ","K02882|9.75376e-127|brp:103835248|K02882 large subunit ribosomal protein L18Ae | (RefSeq) 60S ribosomal protein L18a-2","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A","60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: 60S ribosomal protein L18a-2 isoform X1 [Brassica rapa]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991)"]
["Bra009148","Bra009148",39.628986,3829,0.741802,73,0.896745,81,1.541926,106,1.167195,77,1.3339,89,0.00505642276728877,-2.92351199560091,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: binding (GO:0005488);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ion transport (GO:0006811);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: innate immune response (GO:0045087);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 71A1 OS=Persea americana OX=3435 GN=CYP71A1 PE=1 SV=2","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 71A1-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226);; biological process: immune system process (GO:0002376)"]
["Bra013803","Bra013803",26.600132,5038,10.153454,1989,9.656924,1826,3.693982,507,3.048202,459,3.613019,448,{"v":1.9439045274982e-11,"d":"1.94E-11"},-2.57101888716736,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: circadian rhythm (GO:0007623);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: cold acclimation (GO:0009631);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: carbohydrate kinase activity (GO:0019200);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: protein autophosphorylation (GO:0046777);; Molecular Function: alpha-glucan, water dikinase activity (GO:0050521);; Molecular Function: phosphoglucan, water dikinase activity (GO:0051752);; ","K08244|0|brp:103862103|K08244 alpha-glucan, water dikinase [EC:2.7.9.4] | (RefSeq) alpha-glucan water dikinase 2","--","--","--","Pyruvate phosphate dikinase, PEP/pyruvate binding domain","Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana OX=3702 GN=GWD2 PE=2 SV=3","S","Function unknown","PREDICTED: alpha-glucan water dikinase 2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: rhythmic process (GO:0048511);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699)"]
["Bra038834","Bra038834",0.462429,42,0.543053,47,0.144687,16,4.21823,312,4.198032,283,2.647749,207,{"v":2.27020771735069e-09,"d":"2.27E-09"},2.79267007915202,"up","[H]","Coenzyme transport and metabolism","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: phloem sucrose loading (GO:0009915);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Molecular Function: homogentisate phytyltransferase activity (GO:0010176);; Biological Process: vitamin E biosynthetic process (GO:0010189);; Biological Process: chlorophyll metabolic process (GO:0015994);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: regulation of lipid metabolic process (GO:0019216);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: cell differentiation (GO:0030154);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: establishment of localization in cell (GO:0051649);; Biological Process: cell wall organization (GO:0071555);; ","K09833|0|brp:103828352|K09833 homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116] | (RefSeq) homogentisate phytyltransferase 1, chloroplastic","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130)","--","--","UbiA prenyltransferase family","Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HPT1 PE=1 SV=1","H","Coenzyme transport and metabolism","PREDICTED: homogentisate phytyltransferase 1, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra019050","Bra019050",20.248535,690,22.393886,764,26.145299,818,20.232484,486,10.14343,234,10.65335,251,0.001638994159819,-1.26594404671427,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: xylan biosynthetic process (GO:0045492);; ","--","--","--","--","Protein of unknown function (DUF1218)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103861693 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra001325","Bra001325",3.016773,175,2.329334,146,2.010073,119,8.589641,360,7.75983,319,7.515616,318,{"v":1.86462744926976e-07,"d":"1.86E-07"},1.13136803802323,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);; Biological Process: phytochromobilin biosynthetic process (GO:0010024);; Molecular Function: phytochromobilin:ferredoxin oxidoreductase activity (GO:0050619);; Molecular Function: cobalt ion binding (GO:0050897);; Biological Process: oxidation-reduction process (GO:0055114);; ","K08101|0|brp:103859309|K08101 phytochromobilin:ferredoxin oxidoreductase [EC:1.3.7.4] | (RefSeq) phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like","Porphyrin and chlorophyll metabolism (ko00860)","--","--","Ferredoxin-dependent bilin reductase","Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HY2 PE=2 SV=1","H","Coenzyme transport and metabolism","PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra011786","Bra011786",8.577368,534,11.125025,686,10.88521,629,58.887181,2591,99.322173,4150,108.984846,4607,{"v":2.97006210668629e-14,"d":"2.97E-14"},2.50448577660618,"up","--","--","Cellular Component: histone acetyltransferase complex (GO:0000123);; Molecular Function: transcription regulatory region sequence-specific DNA binding (GO:0000976);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein acetylation (GO:0006473);; Biological Process: cell proliferation (GO:0008283);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: shade avoidance (GO:0009641);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: response to far red light (GO:0010218);; Biological Process: protein deneddylation (GO:0010388);; Molecular Function: H3 histone acetyltransferase activity (GO:0010484);; Biological Process: floral meristem determinacy (GO:0010582);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone methylation (GO:0016571);; Biological Process: histone acetylation (GO:0016573);; Biological Process: protein deubiquitination (GO:0016579);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Molecular Function: protein self-association (GO:0043621);; Biological Process: post-translational protein modification (GO:0043687);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: gynoecium development (GO:0048467);; Biological Process: fruit septum development (GO:0080127);; ","K09338|6.64494e-175|brp:103857600|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein HAT22","--","[K]","Transcription","Homeobox domain;; Homeobox associated leucine zipper","Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 PE=1 SV=1","K","Transcription","PREDICTED: homeobox-leucine zipper protein HAT22 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414)"]
["Bra008998","Bra008998",27.149809,2049,34.766495,2648,26.389376,1843,18.975887,1014,17.183725,884,14.095675,729,{"v":1.89108954988113e-07,"d":"1.89E-07"},-1.35773490312469,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: chloroplast (GO:0009507);; Biological Process: cellular component organization (GO:0016043);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: root hair elongation (GO:0048767);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","Plant protein of unknown function (DUF868)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103846761 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra019925","Bra019925",5.462804,195,5.379643,192,5.096391,167,17.432834,439,23.477696,565,24.742943,599,{"v":3.76398593644058e-09,"d":"3.76E-09"},1.46929243412248,"up","--","--","Biological Process: response to light intensity (GO:0009642);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: plastid nucleoid (GO:0042646);; ","--","--","--","--","--","Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRIN2 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103871831 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: nucleoid (GO:0009295);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra014235","Bra014235",5.893479,501,11.998198,1024,12.156704,925,2.82003,162,0.842762,55,0.951203,53,{"v":8.90051946071312e-08,"d":"8.90E-08"},-3.0849962687987,"down","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Molecular Function: branched-chain-amino-acid transaminase activity (GO:0004084);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: branched-chain amino acid metabolic process (GO:0009081);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Molecular Function: methionine-oxo-acid transaminase activity (GO:0010326);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Molecular Function: L-leucine transaminase activity (GO:0052654);; Molecular Function: L-valine transaminase activity (GO:0052655);; Molecular Function: L-isoleucine transaminase activity (GO:0052656);; ","K00826|0|brp:103832898|K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] | (RefSeq) putative branched-chain-amino-acid aminotransferase 7","Cysteine and methionine metabolism (ko00270);; Valine, leucine and isoleucine degradation (ko00280);; Valine, leucine and isoleucine biosynthesis (ko00290);; Pantothenate and CoA biosynthesis (ko00770);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Amino-transferase class IV","Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana OX=3702 GN=BCAT7 PE=5 SV=1","E","Amino acid transport and metabolism","PREDICTED: putative branched-chain-amino-acid aminotransferase 7 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052)"]
["Bra036272","Bra036272",71.636896,2228,131.401326,4124,145.671868,4191,32.889167,723,11.825026,250,13.8142,294,{"v":7.86662441461115e-09,"d":"7.87E-09"},-3.00413414229781,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: embryo development (GO:0009790);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Late embryogenesis abundant protein","Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1","S","Function unknown","PREDICTED: protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra041092","Bra041092",0.382561,33,0.912525,68,1.226343,83,3.106865,124,4.716931,245,5.138758,272,0.00837171551611944,1.60157384412203,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Patatin-like phospholipase","--","S","Function unknown","PREDICTED: patatin-like phospholipase domain-containing protein 4 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra037833","Bra037833",5.204563,449,3.802238,331,2.744394,219,16.173723,986,12.947762,760,10.736432,634,0.000158344846524695,1.20809745586928,"up","[D]","Cell cycle control, cell division, chromosome partitioning","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: immune system process (GO:0002376);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to organic substance (GO:0010033);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: system development (GO:0048731);; Biological Process: response to other organism (GO:0051707);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","U-box domain","U-box domain-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=PUB31 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: U-box domain-containing protein 31 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra033587","Bra033587",11.165354,1037,20.826172,1921,21.953704,1898,1.861428,129,0.656615,46,0.782774,56,{"v":4.40639989849596e-17,"d":"4.41E-17"},-4.277004631161,"down","--","--","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: cell plate assembly (GO:0000919);; Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytoskeleton (GO:0005856);; Cellular Component: microtubule associated complex (GO:0005875);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: microtubule-based process (GO:0007017);; Biological Process: male meiosis cytokinesis (GO:0007112);; Biological Process: cell proliferation (GO:0008283);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: pollen development (GO:0009555);; Biological Process: embryo sac cellularization (GO:0009558);; Biological Process: radial microtubular system formation (GO:0010245);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: histone phosphorylation (GO:0016572);; ","K11498|0|brp:103828075|K11498 centromeric protein E | (RefSeq) kinesin-like protein KIN-7F","--","[Z]","Cytoskeleton","Domain of unknown function (DUF3490)","Kinesin-like protein KIN-7F OS=Arabidopsis thaliana OX=3702 GN=KIN7F PE=2 SV=1","Z","Cytoskeleton","PREDICTED: kinesin-like protein KIN-7F [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra031235","Bra031235",24.058949,2280,18.320167,1821,22.483358,2012,7.511689,499,3.525808,265,4.114924,310,{"v":3.95848532703856e-17,"d":"3.96E-17"},-2.5222782866976,"down","[R]","General function prediction only","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA replication (GO:0006260);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cell adhesion (GO:0007155);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: histone modification (GO:0016570);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: cell cycle process (GO:0022402);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: cortical microtubule organization (GO:0043622);; Biological Process: actin nucleation (GO:0045010);; Biological Process: root hair cell differentiation (GO:0048765);; Cellular Component: cortical microtubule (GO:0055028);; Biological Process: cell wall organization (GO:0071555);; ","K08857|0|brp:103869224|K08857 NIMA (never in mitosis gene a)-related kinase 1/4/5 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase Nek6","--","[R]","General function prediction only","Protein kinase domain;; Protein tyrosine kinase;; Kinase-like","Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase Nek6 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: biological adhesion (GO:0022610);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422)"]
["Brassica_rapa_newGene_1454","--",0.234624,19,0.213023,17,0.186237,14,1.924964,96,2.467568,127,1.360269,67,{"v":1.80279976472859e-06,"d":"1.80E-06"},2.38472043175942,"up","--","--","Biological Process: formation of cytoplasmic translation initiation complex (GO:0001732);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of translation (GO:0006417);; Biological Process: cell cycle arrest (GO:0007050);; Biological Process: regulation of mitotic cell cycle (GO:0007346);; Biological Process: polar nucleus fusion (GO:0010197);; ","--","--","[S]","Function unknown","--","Mitochondrial import receptor subunit TOM40-1 OS=Arabidopsis thaliana OX=3702 GN=TOM40-1 PE=1 SV=3","S","Function unknown","BnaCnng33530D [Brassica napus]","biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra013926","Bra013926",1.449949,198,3.814171,498,3.444813,421,0.23703,26,0.084637,9,0.02411,3,{"v":1.07520601207673e-09,"d":"1.08E-09"},-4.46492414371275,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: signal transduction (GO:0007165);; Molecular Function: oxysterol binding (GO:0008142);; Biological Process: steroid metabolic process (GO:0008202);; Biological Process: response to hormone (GO:0009725);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K20464|0|brp:103863629|K20464 oxysterol-binding protein-related protein 5/8 | (RefSeq) oxysterol-binding protein-related protein 4B","--","[T]","Signal transduction mechanisms","Oxysterol-binding protein","Oxysterol-binding protein-related protein 4B OS=Arabidopsis thaliana OX=3702 GN=ORP4B PE=2 SV=2","S","Function unknown","PREDICTED: oxysterol-binding protein-related protein 4B isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra008438","Bra008438",473.103945,37635,726.311212,58676,653.940303,52593,143.999888,8824,70.067898,4143,67.460654,4188,{"v":3.03557857880131e-14,"d":"3.04E-14"},-3.1060187790617,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: alternative mRNA splicing, via spliceosome (GO:0000380);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: tRNA modification (GO:0006400);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo sac development (GO:0009553);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salt stress (GO:0009651);; Biological Process: etioplast organization (GO:0009662);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: histone H3-K36 methylation (GO:0010452);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Biological Process: positive regulation of histone methylation (GO:0031062);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Molecular Function: histone methyltransferase activity (H3-K4 specific) (GO:0042800);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: carotenoid isomerase activity (GO:0046608);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: histone methyltransferase activity (H3-K36 specific) (GO:0046975);; Cellular Component: apoplast (GO:0048046);; Biological Process: seed development (GO:0048316);; Biological Process: leaf development (GO:0048366);; Biological Process: plant ovule development (GO:0048481);; Biological Process: anther development (GO:0048653);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: sporopollenin biosynthetic process (GO:0080110);; Biological Process: 5-carbamoylmethyl uridine residue modification (GO:0080178);; ","K09753|0|brp:103853214|K09753 cinnamoyl-CoA reductase [EC:1.2.1.44] | (RefSeq) CCR2, CCR2-2; cinnamoyl-CoA reductase 2","Phenylpropanoid biosynthesis (ko00940)","[V]","Defense mechanisms","NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; NAD(P)H-binding;; NmrA-like family;; GDP-mannose 4,6 dehydratase;; Male sterility protein;; Polysaccharide biosynthesis protein;; KR domain","Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana OX=3702 GN=CCR2 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","cinnamoyl-CoA reductase 2 [Brassica napus] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; cellular component: extracellular region (GO:0005576);; biological process: multi-organism process (GO:0051704)"]
["Bra005860","Bra005860",119.484752,9223,163.023318,12653,173.286661,12368,37.737261,2036,20.708614,1073,17.986428,960,{"v":9.89954762427017e-16,"d":"9.90E-16"},-3.07154057295296,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: vacuole organization (GO:0007033);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: detection of bacterium (GO:0016045);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: flavonol synthase activity (GO:0045431);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: seed development (GO:0048316);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to karrikin (GO:0080167);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Probable 2-oxoglutarate-dependent dioxygenase At5g05600 OS=Arabidopsis thaliana OX=3702 GN=At5g05600 PE=2 SV=1","S","Function unknown","PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra010082","Bra010082",0.073973,6,0.095171,8,0,0,0.662835,39,2.298273,128,2.373609,132,{"v":5.01297868352119e-05,"d":"5.01E-05"},3.67997161125112,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cell death (GO:0008219);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: determination of bilateral symmetry (GO:0009855);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: root development (GO:0048364);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; ","K16222|3.3049e-176|brp:103874677|K16222 Dof zinc finger protein DOF5.5 | (RefSeq) cyclic dof factor 1","Circadian rhythm - plant (ko04712)","--","--","Dof domain, zinc finger","Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2","K","Transcription","PREDICTED: cyclic dof factor 1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896)"]
["Bra029491","Bra029491",4.88067,587,8.554767,1034,12.212351,1398,5.109093,448,3.073614,262,2.519199,203,0.000780376187688342,-1.75010846230986,"down","--","--","Biological Process: immune effector process (GO:0002252);; Biological Process: regulation of immune system process (GO:0002682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: cation transport (GO:0006812);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: response to chitin (GO:0010200);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: establishment of cell polarity (GO:0030010);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to boron-containing substance deprivation (GO:0080169);; ","--","--","--","--","WRKY DNA -binding domain","WRKY transcription factor 42 OS=Arabidopsis thaliana OX=3702 GN=WRKY42 PE=1 SV=1","K","Transcription","PREDICTED: LOW QUALITY PROTEIN: WRKY transcription factor 42-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152)"]
["Bra010111","Bra010111",1469.52121,176780,917.206276,111577,922.540283,103282,312.996714,26711,164.542438,13515,157.586494,13049,{"v":5.852027160303e-16,"d":"5.85E-16"},-2.84493083570513,"down","[E]","Amino acid transport and metabolism","Cellular Component: plant-type vacuole (GO:0000325);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: iron ion transport (GO:0006826);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Molecular Function: oligopeptide transporter activity (GO:0015198);; Biological Process: cellular component organization (GO:0016043);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: low-affinity nitrate transmembrane transporter activity (GO:0080054);; Biological Process: low-affinity nitrate transport (GO:0080055);; Biological Process: response to karrikin (GO:0080167);; Biological Process: phloem nitrate loading (GO:0090408);; Molecular Function: glucosinolate:proton symporter activity (GO:0090448);; Biological Process: phloem glucosinolate loading (GO:0090449);; Biological Process: glucosinolate transport (GO:1901349);; ","--","--","[E]","Amino acid transport and metabolism","POT family","Protein NRT1/ PTR FAMILY 2.11 OS=Arabidopsis thaliana OX=3702 GN=NPF2.11 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: transporter activity (GO:0005215);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501)"]
["Bra022430","Bra022430",62.083272,6328,46.205242,4790,41.269431,3957,39.466683,2831,33.522744,2294,30.28604,2227,{"v":2.47078323651138e-08,"d":"2.47E-08"},-1.06264364459602,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","Protein of unknown function (DUF620)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103869445 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra020533","Bra020533",1.152155,194,0.857155,128,0.652339,88,3.358009,368,5.391348,540,5.430477,591,{"v":8.57500969634241e-07,"d":"8.58E-07"},1.81399283019423,"up","[L]","Replication, recombination and repair","Biological Process: Group II intron splicing (GO:0000373);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Molecular Function: ATP-dependent helicase activity (GO:0008026);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: membrane (GO:0016020);; Cellular Component: protein complex (GO:0043234);; ","K16911|0|brp:103854713|K16911 ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like","--","[A]","RNA processing and modification","DEAD/DEAH box helicase;; Helicase conserved C-terminal domain;; GUCT (NUC152) domain;; Type III restriction enzyme, res subunit;; Zinc knuckle","DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH3 PE=1 SV=2","L","Replication, recombination and repair","PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991)"]
["Bra009262","Bra009262",57.370346,2416,24.156397,1027,19.675961,767,22.235783,663,12.052192,346,16.175926,467,0.00207188565100147,-1.45014880182189,"down","--","--","Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);; Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: stomatal lineage progression (GO:0010440);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: regulation of cell cycle (GO:0051726);; ","--","--","[R]","General function prediction only","Cyclin;; Cyclin, N-terminal domain","Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1","S","Function unknown","PREDICTED: cyclin-U4-2 [Brassica rapa]","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra022560","Bra022560",2.441147,268,2.10972,240,2.207823,228,7.410351,576,10.229006,755,7.853502,577,{"v":1.15652893045386e-08,"d":"1.16E-08"},1.31508843438286,"up","[E]","Amino acid transport and metabolism","Molecular Function: L-aspartate:2-oxoglutarate aminotransferase activity (GO:0004069);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of translation (GO:0006417);; Biological Process: amino acid transport (GO:0006865);; Molecular Function: aromatic-amino-acid:2-oxoglutarate aminotransferase activity (GO:0008793);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to chitin (GO:0010200);; Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: 1-aminocyclopropane-1-carboxylate biosynthetic process (GO:0042218);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: cellular response to iron ion (GO:0071281);; ","K14270|0|brp:103852131|K14270 aminotransferase | (RefSeq) probable aminotransferase ACS12","--","[T]","Signal transduction mechanisms","Aminotransferase class I and II","Probable aminotransferase ACS12 OS=Arabidopsis thaliana OX=3702 GN=ACS12 PE=2 SV=2","E","Amino acid transport and metabolism","PREDICTED: probable aminotransferase ACS12 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)"]
["Bra013761","Bra013761",0.335524,23,0.882629,57,0.629262,36,2.30376,109,3.756391,162,3.048043,134,0.00271377870041451,1.64146562603488,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: mRNA modification (GO:0016556);; Biological Process: cell differentiation (GO:0030154);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103861719 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra035856","Bra035856",1.180693,92,1.071841,108,1.264311,115,2.503623,190,4.485549,310,5.529199,324,0.00132865590627979,1.28780903144885,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","--","--","[R]","General function prediction only","Translin family","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: translin-associated protein X-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra023703","Bra023703",2.008488,159,2.372749,189,2.015552,147,0,0,0,0,0,0,{"v":2.14645622518192e-17,"d":"2.15E-17"},-7.64056800915838,"down","--","--","Cellular Component: cell wall (GO:0005618);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: defense response (GO:0006952);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to chemical (GO:0042221);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: multi-organism process (GO:0051704);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor C-terminal;; Xylanase inhibitor N-terminal","Basic 7S globulin OS=Glycine max OX=3847 GN=BG PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: basic 7S globulin-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra020862","Bra020862",5.582412,799,14.93361,2014,13.139323,1771,3.060249,253,1.244576,109,0.543138,41,{"v":7.54674787278592e-07,"d":"7.55E-07"},-3.31777133253507,"down","[V]","Defense mechanisms","Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: purine nucleobase transport (GO:0006863);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: response to chitin (GO:0010200);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Biological Process: proline transport (GO:0015824);; Biological Process: response to karrikin (GO:0080167);; ","K03327|0|brp:103834230|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 39","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 39 OS=Arabidopsis thaliana OX=3702 GN=DTX39 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 39 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; cellular component: organelle part (GO:0044422);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215)"]
["Bra011678","Bra011678",1.356122,192,0.728823,112,0.56684,64,0.083987,5,0.096679,7,0.082722,10,{"v":5.51675321741023e-10,"d":"5.52E-10"},-3.77907707743636,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: microtubule bundle formation (GO:0001578);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: steroid hydroxylase activity (GO:0008395);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: skotomorphogenesis (GO:0009647);; Biological Process: abscisic acid metabolic process (GO:0009687);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: cell tip growth (GO:0009932);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to UV-B (GO:0010224);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Biological Process: pollen exine formation (GO:0010584);; Cellular Component: membrane (GO:0016020);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: electron transport chain (GO:0022900);; Cellular Component: cytoplasmic vesicle (GO:0031410);; Biological Process: monopolar cell growth (GO:0042814);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: leaf development (GO:0048366);; Biological Process: petal development (GO:0048441);; Biological Process: stamen development (GO:0048443);; Biological Process: anther wall tapetum cell differentiation (GO:0048657);; Biological Process: root hair elongation (GO:0048767);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cell wall organization (GO:0071555);; ","K12637|0|brp:103868633|K12637 3-epi-6-deoxocathasterone 23-monooxygenase [EC:1.14.13.112] | (RefSeq) 3-epi-6-deoxocathasterone 23-monooxygenase","Brassinosteroid biosynthesis (ko00905)","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana OX=3702 GN=ROT3 PE=2 SV=3","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; biological process: reproductive process (GO:0022414)"]
["Bra012081","Bra012081",2.289446,208,1.663518,154,1.569429,154,5.769844,314,8.588861,563,7.961423,542,{"v":7.00206062317714e-05,"d":"7.00E-05"},1.39474291916848,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: chloroplast (GO:0009507);; ","K06287|2.36738e-103|brp:103829592|K06287 septum formation protein | (RefSeq) maf-like protein DDB_G0281937","--","[D]","Cell cycle control, cell division, chromosome partitioning","Maf-like protein","--","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra012256","Bra012256",0.276034,17,0.399784,25,0.435744,25,1.974097,84,2.092471,86,2.1658,90,{"v":8.60448545361688e-05,"d":"8.60E-05"},1.81772341579326,"up","--","--","Molecular Function: AT DNA binding (GO:0003680);; Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: chromatin organization (GO:0006325);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: seed germination (GO:0009845);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: leaf senescence (GO:0010150);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: lipid storage (GO:0019915);; Biological Process: response to freezing (GO:0050826);; ","--","--","--","--","Domain of unknown function (DUF296)","AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana OX=3702 GN=AHL27 PE=1 SV=1","S","Function unknown","PREDICTED: AT-hook motif nuclear-localized protein 27-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179)"]
["Bra038384","Bra038384",134.381411,28504,113.101503,24297,119.496872,23583,94.19737,14196,77.479175,11247,69.332176,10203,{"v":2.57493952129142e-10,"d":"2.57E-10"},-1.14238809996667,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: phosphopantetheine binding (GO:0031177);; ","--","--","[T]","Signal transduction mechanisms","T-complex protein 11","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103838833 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra003594","Bra003594",19.462901,1006,32.230065,1769,41.254888,1955,20.688095,722,9.6624,360,13.255669,477,0.000305680556196376,-1.64038293347338,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR1 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103830466 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028996","Bra028996",26.699785,2064,14.913594,1190,15.628316,1164,7.921624,444,3.955754,219,4.203814,249,{"v":9.14147304814998e-10,"d":"9.14E-10"},-2.24916923442828,"down","[IR]","Lipid transport and metabolism;; General function prediction only","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: multicellular organism development (GO:0007275);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: proline transport (GO:0015824);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: lipase activity (GO:0016298);; Biological Process: single-organism developmental process (GO:0044767);; Cellular Component: apoplast (GO:0048046);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana OX=3702 GN=At5g55050 PE=2 SV=1","S","Function unknown","PREDICTED: GDSL esterase/lipase At5g55050-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)"]
["Bra037033","Bra037033",52.401453,3968,164.281861,13650,166.729584,12772,5.761663,292,1.37178,80,2.08075,96,{"v":5.20892870935988e-19,"d":"5.21E-19"},-5.66466245495162,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: iron ion transport (GO:0006826);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to ozone (GO:0010193);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellulose biosynthetic process (GO:0030244);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 61 OS=Arabidopsis thaliana OX=3702 GN=At4g32950 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 61 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896)"]
["Bra010985","Bra010985",52.909767,4851,64.487233,6019,68.670365,5801,41.443873,2706,31.866639,2022,30.28701,1923,{"v":2.1570991742848e-07,"d":"2.16E-07"},-1.38035805741774,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Molecular Function: phosphoric diester hydrolase activity (GO:0008081);; Cellular Component: plastid (GO:0009536);; Biological Process: pollen development (GO:0009555);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to ethylene (GO:0009723);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: amino acid import (GO:0043090);; Biological Process: post-translational protein modification (GO:0043687);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cellular response to osmotic stress (GO:0071470);; ","--","--","[R]","General function prediction only","Tub family;; F-box domain;; F-box-like","Tubby-like F-box protein 10 OS=Arabidopsis thaliana OX=3702 GN=TULP10 PE=1 SV=1","S","Function unknown","PREDICTED: tubby-like F-box protein 10 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987)"]
["Bra024335","Bra024335",282.537772,6252,443.01946,9888,433.615799,8851,83.777613,1315,23.353632,351,29.910974,453,{"v":1.24171417817102e-10,"d":"1.24E-10"},-3.45793196629939,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: defense response, incompatible interaction (GO:0009814);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","--","--","--","--","Family of unknown function (DUF5306)","Elicitor peptide 1 OS=Arabidopsis thaliana OX=3702 GN=PEP1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: elicitor peptide 1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; cellular component: organelle (GO:0043226)"]
["Bra034562","Bra034562",56.224537,9152,71.540962,11752,76.986122,11593,34.566185,3981,22.580393,2504,21.674519,2418,{"v":1.32508381720513e-09,"d":"1.33E-09"},-1.91058505394997,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: MAPK cascade (GO:0000165);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: peptide receptor activity (GO:0001653);; Biological Process: defense response to oomycetes (GO:0002229);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: transmembrane receptor protein tyrosine kinase activity (GO:0004714);; Molecular Function: transmembrane signaling receptor activity (GO:0004888);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: endosome (GO:0005768);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to wounding (GO:0009611);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: cell tip growth (GO:0009932);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: meristem initiation (GO:0010014);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: leaf senescence (GO:0010150);; Biological Process: pollen maturation (GO:0010152);; Biological Process: response to chitin (GO:0010200);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cell growth (GO:0016049);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: protein complex (GO:0043234);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: anther development (GO:0048653);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cell wall organization (GO:0071555);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: regulation of seedling development (GO:1900140);; ","K13416|0|brp:103834483|K13416 brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like","Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat N-terminal domain;; Leucine rich repeat","BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra025425","Bra025425",6.279499,1515,19.777834,4781,21.804908,4843,0.910838,146,0.45747,78,0.77263,131,{"v":3.90341140359845e-19,"d":"3.90E-19"},-4.81088461821142,"down","[V]","Defense mechanisms","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: regulation of cell size (GO:0008361);; Molecular Function: xenobiotic-transporting ATPase activity (GO:0008559);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: plastid (GO:0009536);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to blue light (GO:0009637);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: vernalization response (GO:0010048);; Biological Process: formation of animal organ boundary (GO:0010160);; Biological Process: response to far red light (GO:0010218);; Biological Process: auxin efflux (GO:0010315);; Molecular Function: auxin influx transmembrane transporter activity (GO:0010328);; Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: acropetal auxin transport (GO:0010541);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: cellular protein complex assembly (GO:0043623);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: carpel development (GO:0048440);; Biological Process: stamen development (GO:0048443);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair elongation (GO:0048767);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: auxin influx (GO:0060919);; Biological Process: cell wall organization (GO:0071555);; ","K05658|0|brp:103875045|K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44] | (RefSeq) putative ABC transporter B family member 8","ABC transporters (ko02010)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter transmembrane region;; ABC transporter;; AAA ATPase domain;; Zeta toxin;; AAA domain;; P-loop containing region of AAA domain;; ATPase family associated with various cellular activities (AAA)","Putative ABC transporter B family member 8 OS=Arabidopsis thaliana OX=3702 GN=ABCB8 PE=5 SV=1","V","Defense mechanisms","PREDICTED: putative ABC transporter B family member 8 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414)"]
["Bra007888","Bra007888",25.391958,1940,47.510206,3561,34.571312,2445,6.353002,328,3.431336,177,1.715279,91,{"v":1.33945104925327e-12,"d":"1.34E-12"},-3.63543297986113,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; ","--","--","--","--","Domain of unknown function (DUF569);; Fascin domain;; Ricin-type beta-trefoil lectin domain-like","--","S","Function unknown","PREDICTED: uncharacterized protein LOC106322433 [Brassica oleracea var. oleracea]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra019370","Bra019370",53.626563,5012,127.779123,11003,136.568476,13115,44.683811,2639,17.852044,1129,13.469374,1031,{"v":2.74159570533624e-06,"d":"2.74E-06"},-2.57181876181898,"down","[G]","Carbohydrate transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: trehalose-phosphatase activity (GO:0004805);; Cellular Component: nucleus (GO:0005634);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to cadmium ion (GO:0046686);; ","K01087|0|brp:103861317|K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] | (RefSeq) probable trehalose-phosphate phosphatase G","Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Trehalose-phosphatase","Probable trehalose-phosphate phosphatase G OS=Arabidopsis thaliana OX=3702 GN=TPPG PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable trehalose-phosphate phosphatase G [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra003084","Bra003084",9.512216,440,9.504794,421,10.305924,414,29.547239,1007,24.723485,810,29.075229,857,{"v":1.19413713586181e-07,"d":"1.19E-07"},1.00685844247488,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Cellular Component: chloroplast (GO:0009507);; Biological Process: ribosome biogenesis (GO:0042254);; ","K02939|8.1747e-147|brp:103844789|K02939 large subunit ribosomal protein L9 | (RefSeq) 50S ribosomal protein L9-like","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein L9, N-terminal domain;; Ribosomal protein L9, C-terminal domain","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103844789 [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra010543","Bra010543",6.698449,1073,19.463188,3144,19.92079,2950,3.185646,361,1.206358,132,0.87764,97,{"v":4.31317354337554e-08,"d":"4.31E-08"},-3.44872846713866,"down","[T]","Signal transduction mechanisms","Cellular Component: nucleus (GO:0005634);; Cellular Component: late endosome (GO:0005770);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: potassium ion transport (GO:0006813);; Biological Process: regulation of pH (GO:0006885);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: endomembrane system (GO:0012505);; Molecular Function: sodium:proton antiporter activity (GO:0015385);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular potassium ion homeostasis (GO:0030007);; Biological Process: water homeostasis (GO:0030104);; Biological Process: sodium ion transmembrane transport (GO:0035725);; ","--","--","[P]","Inorganic ion transport and metabolism","Sodium/hydrogen exchanger family","Cation/H(+) antiporter 17 OS=Arabidopsis thaliana OX=3702 GN=CHX17 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: cation/H(+) antiporter 17-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: response to stimulus (GO:0050896);; molecular function: transporter activity (GO:0005215);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra020469","Bra020469",20.573825,1550,29.954105,2268,21.892655,1643,6.221701,330,7.661598,375,8.040141,412,{"v":1.90135321555005e-16,"d":"1.90E-16"},-2.31938624400331,"down","[R]","General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to osmotic stress (GO:0006970);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: response to chemical (GO:0042221);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00001|0|brp:103854788|K00001 alcohol dehydrogenase [EC:1.1.1.1] | (RefSeq) alcohol dehydrogenase-like 6","Glycolysis / Gluconeogenesis (ko00010);; Fatty acid degradation (ko00071);; Tyrosine metabolism (ko00350)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Zinc-binding dehydrogenase;; Alcohol dehydrogenase GroES-like domain","Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana OX=3702 GN=At5g24760 PE=2 SV=2","C","Energy production and conversion","PREDICTED: alcohol dehydrogenase-like 6 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra024273","Bra024273",4.033563,650,2.259878,344,2.435505,354,16.06188,1892,21.661269,2253,20.476152,2333,{"v":4.39088171680824e-16,"d":"4.39E-16"},2.21749741003211,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","Protein LNK1 OS=Arabidopsis thaliana OX=3702 GN=LNK1 PE=1 SV=1","S","Function unknown","PREDICTED: protein LNK1 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra002416","Bra002416",22.685845,2243,64.012249,6419,67.578496,6171,2.696091,191,0.248582,20,0.677262,51,{"v":7.23069472881028e-13,"d":"7.23E-13"},-5.30453984398929,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: double-strand break repair via homologous recombination (GO:0000724);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: RNA processing (GO:0006396);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Cellular Component: chloroplast (GO:0009507);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to wounding (GO:0009611);; Biological Process: gravitropism (GO:0009630);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to salt stress (GO:0009651);; Biological Process: far-red light signaling pathway (GO:0010018);; Biological Process: wax biosynthetic process (GO:0010025);; Biological Process: response to ionizing radiation (GO:0010212);; Biological Process: suberin biosynthetic process (GO:0010345);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone methylation (GO:0016571);; Biological Process: protein deubiquitination (GO:0016579);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627);; Biological Process: positive regulation of circadian rhythm (GO:0042753);; Biological Process: transcription factor import into nucleus (GO:0042991);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: long-chain-fatty-acyl-CoA reductase activity (GO:0050062);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: fatty-acyl-CoA reductase (alcohol-forming) activity (GO:0080019);; ","K13356|0|brp:103845537|K13356 alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] | (RefSeq) fatty acyl-CoA reductase 1","Cutin, suberine and wax biosynthesis (ko00073);; Peroxisome (ko04146)","[I]","Lipid transport and metabolism","Male sterility protein;; Male sterility protein;; NAD dependent epimerase/dehydratase family;; GDP-mannose 4,6 dehydratase;; 3-beta hydroxysteroid dehydrogenase/isomerase family","Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1","S","Function unknown","PREDICTED: fatty acyl-CoA reductase 1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179)"]
["Bra027623","Bra027623",45.176525,3094,50.261536,3474,50.385651,3193,27.21225,1319,8.146117,380,5.29746,249,0.000224427858177918,-2.2453038002478,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: flavonoid metabolic process (GO:0009812);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance (GO:0032260);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity (GO:0080066);; Molecular Function: 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity (GO:0080067);; Molecular Function: 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity (GO:0080068);; Molecular Function: 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (GO:0080069);; Molecular Function: 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity (GO:0080070);; Molecular Function: indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity (GO:0080071);; Molecular Function: brassinosteroid sulfotransferase activity (GO:0080118);; Molecular Function: hydroxyjasmonate sulfotransferase activity (GO:0080131);; Molecular Function: flavonoid sulfotransferase activity (GO:1990135);; ","--","--","[R]","General function prediction only","Sulfotransferase domain;; Sulfotransferase family","Cytosolic sulfotransferase 18 OS=Arabidopsis thaliana OX=3702 GN=SOT18 PE=1 SV=1","S","Function unknown","PREDICTED: cytosolic sulfotransferase 18-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: multi-organism process (GO:0051704);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824)"]
["Bra011151","Bra011151",1.203556,69,1.293329,75,1.282333,68,0.09377,4,0.104368,5,0,0,{"v":8.02161951767383e-08,"d":"8.02E-08"},-4.0833484854371,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; ","--","--","[R]","General function prediction only","Zinc knuckle","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103855070 [Brassica rapa]","molecular function: binding (GO:0005488)"]
["Bra015323","Bra015323",2.700924,338,2.028308,222,1.646211,184,5.917383,520,8.986193,721,6.401754,560,{"v":2.54508183804859e-05,"d":"2.55E-05"},1.23562135020723,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plasmodesmata-mediated intercellular transport (GO:0010497);; Biological Process: transport of virus in multicellular host (GO:0046739);; ","--","--","--","--","Salt stress response/antifungal","Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana OX=3702 GN=CRRSP3 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","BnaC05g02630D [Brassica napus]","cellular component: extracellular region (GO:0005576);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: locomotion (GO:0040011);; biological process: multi-organism process (GO:0051704)"]
["Bra006607","Bra006607",5.233419,315,3.160306,192,3.479756,194,19.136082,815,24.535069,1005,22.801229,940,{"v":2.66398823133573e-15,"d":"2.66E-15"},1.92957242496744,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: animal organ morphogenesis (GO:0009887);; Cellular Component: membrane (GO:0016020);; Biological Process: shoot system development (GO:0048367);; Biological Process: meristem development (GO:0048507);; Biological Process: developmental growth (GO:0048589);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana OX=3702 GN=At1g49730 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable receptor-like protein kinase At1g49730 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra026863","Bra026863",72.387022,11928,68.087601,11517,47.256316,10505,18.066306,2202,13.278448,2340,21.036102,2483,{"v":1.04690936096313e-65,"d":"1.05E-65"},-2.31579793575549,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphate ion transport (GO:0006817);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: endosperm development (GO:0009960);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: positive regulation of cell size (GO:0045793);; Biological Process: regulation of seed growth (GO:0080113);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","EXS family;; SPX domain","Phosphate transporter PHO1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=PHO1;H3 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: phosphate transporter PHO1 homolog 3-like isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra025024","Bra025024",47.797077,668,79.737793,1124,72.763924,941,43.630871,432,19.808422,189,25.276953,242,0.000184425177939872,-1.68748753296105,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103827739 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra005283","Bra005283",85.6661,7006,81.341916,7746,77.144677,6917,25.390506,1804,19.444882,1274,21.199896,1444,{"v":8.16692423074507e-27,"d":"8.17E-27"},-2.30244327517463,"down","[F]","Nucleotide transport and metabolism","Cellular Component: cytosol (GO:0005829);; Biological Process: inosine catabolic process (GO:0006148);; Biological Process: purine nucleoside catabolic process (GO:0006152);; Biological Process: uridine catabolic process (GO:0006218);; Biological Process: leaf senescence (GO:0010150);; Molecular Function: UDP-glucosyltransferase activity (GO:0035251);; Molecular Function: uridine nucleosidase activity (GO:0045437);; Molecular Function: adenosine nucleosidase activity (GO:0047622);; Molecular Function: inosine nucleosidase activity (GO:0047724);; Molecular Function: xanthosine nucleotidase activity (GO:0072585);; ","K01240|0|brp:103867296|K01240 uridine nucleosidase [EC:3.2.2.3] | (RefSeq) uridine nucleosidase 1-like","Pyrimidine metabolism (ko00240);; Nicotinate and nicotinamide metabolism (ko00760)","[F]","Nucleotide transport and metabolism","Inosine-uridine preferring nucleoside hydrolase","Uridine nucleosidase 1 OS=Arabidopsis thaliana OX=3702 GN=URH1 PE=1 SV=2","F","Nucleotide transport and metabolism","PREDICTED: uridine nucleosidase 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824)"]
["Bra018058","Bra018058",11.227096,1429,26.539386,3607,29.077331,4227,1.957216,130,0.260486,12,0.196049,14,{"v":2.60361599220293e-10,"d":"2.60E-10"},-5.19509383319113,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to nitrate (GO:0010167);; ","--","--","--","--","Cleavage site for pathogenic type III effector avirulence factor Avr","RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1","S","Function unknown","PREDICTED: RPM1-interacting protein 4 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra017981","Bra017981",4.05464,609,3.172474,475,2.838703,397,8.73716,916,16.455356,1675,14.5243,1490,{"v":1.12810503005365e-05,"d":"1.13E-05"},1.4077088808452,"up","--","--","Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: xylan metabolic process (GO:0045491);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873054 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra017077","Bra017077",69.492921,6698,94.309602,8791,100.429268,9016,69.776025,4805,39.237605,2520,38.210478,2563,0.000330384559299607,-1.35730939879534,"down","[I]","Lipid transport and metabolism","--","K01054|0|bna:106447472|K01054 acylglycerol lipase [EC:3.1.1.23] | (RefSeq) caffeoylshikimate esterase-like","Glycerolipid metabolism (ko00561)","[I]","Lipid transport and metabolism","Serine aminopeptidase, S33;; alpha/beta hydrolase fold;; Alpha/beta hydrolase family;; Phospholipase/Carboxylesterase;; Prolyl oligopeptidase family;; X-Pro dipeptidyl-peptidase (S15 family)","Caffeoylshikimate esterase OS=Arabidopsis thaliana OX=3702 GN=CSE PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: caffeoylshikimate esterase isoform X2 [Brassica rapa] ","--"]
["Bra014958","Bra014958",1.988156,406,2.813453,552,3.056487,552,1.453667,121,2.448036,275,2.084125,222,0.00371644352718443,-1.31360382030938,"down","[S]","Function unknown","--","K00574|0|brp:103828731|K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] | (RefSeq) uncharacterized LOC103828731","--","--","--","Mycolic acid cyclopropane synthetase;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; NAD(P)-binding Rossmann-like domain;; Methyltransferase domain;; Methyltransferase domain;; Flavin containing amine oxidoreductase;; FAD dependent oxidoreductase;; FAD binding domain;; Methyltransferase small domain;; Nodulation protein S (NodS)","3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase OS=Catharanthus roseus OX=4058 GN=NMT PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: uncharacterized protein LOC103828731 [Brassica rapa] ","--"]
["Brassica_rapa_newGene_29326","--",0,0,0.096561,3,0.21281,7,2.785572,62,2.626589,56,5.867021,124,{"v":5.2062513132023e-05,"d":"5.21E-05"},3.69720437733094,"up","--","--","--","--","--","--","--","--","--","L","Replication, recombination and repair","uncharacterized protein LOC106403258 [Brassica napus]","--"]
["Bra009678","Bra009678",2.762773,575,2.257275,508,2.071138,429,8.40769,1217,6.848119,1008,7.783324,1204,{"v":1.81137954386787e-11,"d":"1.81E-11"},1.13226796610162,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; ","--","--","--","--","Plant protein of unknown function (DUF639)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103874212 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra016002","Bra016002",61.896206,2582,29.55102,1244,25.540316,986,162.284729,4789,332.706268,9451,353.450806,10103,{"v":1.73044291865289e-07,"d":"1.73E-07"},2.26792274672771,"up","--","--","Molecular Function: endopeptidase inhibitor activity (GO:0004866);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to nitrate (GO:0010167);; Biological Process: negative regulation of endopeptidase activity (GO:0010951);; Biological Process: programmed cell death (GO:0012501);; Biological Process: nitrate transport (GO:0015706);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; ","--","--","--","--","Trypsin and protease inhibitor","Kunitz trypsin inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=KTI1 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: kunitz-type serine protease inhibitor DrTI-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra000822","Bra000822",1.286673,121,1.868689,200,2.938905,243,1.537449,92,0.353506,31,0.53253,47,0.00496720845395576,-1.7174728846596,"down","--","--","Biological Process: nuclear division (GO:0000280);; Biological Process: double-strand break repair via homologous recombination (GO:0000724);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA replication initiation (GO:0006270);; Biological Process: regulation of DNA replication (GO:0006275);; Biological Process: DNA methylation (GO:0006306);; Biological Process: cell proliferation (GO:0008283);; Cellular Component: plastid (GO:0009536);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: lateral root formation (GO:0010311);; Biological Process: regulation of G2/M transition of mitotic cell cycle (GO:0010389);; Biological Process: stomatal lineage progression (GO:0010440);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: gene silencing (GO:0016458);; Molecular Function: cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: regulation of cell proliferation (GO:0042127);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: negative regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0045736);; Biological Process: spindle assembly (GO:0051225);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: meiotic cell cycle (GO:0051321);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: positive regulation of stomatal complex development (GO:2000123);; ","K06627|0|brp:103858695|K06627 cyclin A | (RefSeq) cyclin-A2-4-like","--","[D]","Cell cycle control, cell division, chromosome partitioning","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Cyclin-A2-4 OS=Arabidopsis thaliana OX=3702 GN=CYCA2-4 PE=2 SV=1","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: cyclin-A2-4-like [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; molecular function: enzyme regulator activity (GO:0030234);; molecular function: binding (GO:0005488)"]
["Bra029523","Bra029523",9.113393,635,10.150128,710,10.598318,686,25.914593,1281,40.945212,1944,42.783635,2054,{"v":1.42524819522378e-05,"d":"1.43E-05"},1.29899572792719,"up","[F]","Nucleotide transport and metabolism","Molecular Function: adenosine deaminase activity (GO:0004000);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: adenosine catabolic process (GO:0006154);; Biological Process: purine ribonucleoside monophosphate biosynthetic process (GO:0009168);; ","--","--","[F]","Nucleotide transport and metabolism","Adenosine/AMP deaminase","--","F","Nucleotide transport and metabolism","PREDICTED: adenosine deaminase-like protein [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Brassica_rapa_newGene_3106","--",13.521902,1288,12.901267,1167,15.409455,1328,4.974376,339,1.141539,75,1.27934,86,{"v":3.16942359245579e-06,"d":"3.17E-06"},-2.79922507423429,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: carbonate dehydratase activity (GO:0004089);; Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: one-carbon metabolic process (GO:0006730);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: calcium ion transmembrane transport (GO:0070588);; ","K01674|4.72141e-164|brp:103857345|K01674 carbonic anhydrase [EC:4.2.1.1] | (RefSeq) alpha carbonic anhydrase 2-like","Nitrogen metabolism (ko00910)","[R]","General function prediction only","Eukaryotic-type carbonic anhydrase","Alpha carbonic anhydrase 2 OS=Arabidopsis thaliana OX=3702 GN=ACA2 PE=2 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: alpha carbonic anhydrase 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra012720","Bra012720",23.290161,2065,35.890774,3212,28.849144,2367,8.530326,536,15.970497,965,14.231587,865,{"v":3.0157379841315e-06,"d":"3.02E-06"},-1.71568461269036,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: defense response (GO:0006952);; Biological Process: cell communication (GO:0007154);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: flower development (GO:0009908);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: stomatal lineage progression (GO:0010440);; Biological Process: histone modification (GO:0016570);; Molecular Function: bHLH transcription factor binding (GO:0043425);; Biological Process: single organism signaling (GO:0044700);; Biological Process: cell fate commitment (GO:0045165);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: seed development (GO:0048316);; Biological Process: response to freezing (GO:0050826);; Biological Process: protein modification by small protein removal (GO:0070646);; ","--","--","--","--","bHLH-MYC and R2R3-MYB transcription factors N-terminal;; Helix-loop-helix DNA-binding domain","Transcription factor bHLH3 OS=Arabidopsis thaliana OX=3702 GN=BHLH3 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH3-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052)"]
["Bra024339","Bra024339",0.512644,90,0.207226,37,0.344074,56,5.04675,627,7.266492,869,8.923349,1074,{"v":8.80978123141771e-21,"d":"8.81E-21"},3.68350913582044,"up","[HT]","Coenzyme transport and metabolism;; Signal transduction mechanisms","Molecular Function: transporter activity (GO:0005215);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: transport (GO:0006810);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[R]","General function prediction only","ABC1 family","Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABC1K8 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103873919 [Brassica rapa]","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987)"]
["Bra002899","Bra002899",6.919044,533,6.79703,529,7.197504,513,23.796072,1297,43.871861,2302,43.120159,2276,{"v":9.57344613275388e-09,"d":"9.57E-09"},1.81558994429029,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","C2 domain","Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103844988 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra026916","Bra026916",2.004036,142,0.973098,64,1.123086,75,4.198035,192,7.140017,297,5.237818,237,0.00173787015757321,1.31661635875721,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: aminopeptidase activity (GO:0004177);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: proteolysis (GO:0006508);; Molecular Function: metalloexopeptidase activity (GO:0008235);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: vernalization response (GO:0010048);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; Biological Process: dolichol biosynthetic process (GO:0019408);; Biological Process: N-terminal protein amino acid modification (GO:0031365);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: carpel development (GO:0048440);; ","K01265|0|brp:103843063|K01265 methionyl aminopeptidase [EC:3.4.11.18] | (RefSeq) methionine aminopeptidase 1B, chloroplastic-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Metallopeptidase family M24","Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MAP1B PE=2 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra033800","Bra033800",1.378625,121,0.673751,60,1.197319,98,2.833555,176,3.440461,206,4.694786,283,0.00570065382125162,1.1799809192803,"up","--","--","Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single-organism process (GO:0044699);; ","--","--","--","--","F-box domain","F-box protein At3g26010 OS=Arabidopsis thaliana OX=3702 GN=At3g26010 PE=2 SV=1","S","Function unknown","PREDICTED: F-box protein At3g26010-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra015781","Bra015781",89.570842,17077,42.621978,8299,61.347601,7197,37.963447,5246,32.246881,2692,27.494401,2626,0.000149988541470834,-1.58657757681407,"down","[DPM]","Cell cycle control, cell division, chromosome partitioning;; Inorganic ion transport and metabolism;; Cell wall/membrane/envelope biogenesis","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Molecular Function: L-ascorbate oxidase activity (GO:0008447);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: cellulose metabolic process (GO:0030243);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: L-ascorbate oxidase homolog [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; cellular component: extracellular region (GO:0005576)"]
["Bra036217","Bra036217",117.692953,7959,119.925361,8310,120.430706,7749,79.244495,3839,50.747849,2342,46.013667,2167,{"v":7.86293692111354e-08,"d":"7.86E-08"},-1.56368504242731,"down","--","--","Biological Process: tryptophan biosynthetic process (GO:0000162);; Molecular Function: chorismate mutase activity (GO:0004106);; Cellular Component: cytosol (GO:0005829);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: L-ascorbate peroxidase activity (GO:0016688);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: chorismate metabolic process (GO:0046417);; ","K01850|0|brp:103837205|K01850 chorismate mutase [EC:5.4.99.5] | (RefSeq) chorismate mutase 1, chloroplastic-like","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","--","Chorismate mutase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CM1 PE=1 SV=3","E","Amino acid transport and metabolism","PREDICTED: chorismate mutase 1, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; molecular function: antioxidant activity (GO:0016209);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra012131","Bra012131",53.0499,3572,154.397064,10490,117.31794,7307,38.608574,1839,28.791515,1320,36.315395,1676,{"v":4.16505997047464e-06,"d":"4.17E-06"},-2.15454363667563,"down","[T]","Signal transduction mechanisms","Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoskeleton (GO:0005856);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA replication (GO:0006260);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: microtubule-based process (GO:0007017);; Molecular Function: phosphoric diester hydrolase activity (GO:0008081);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: pollen sperm cell differentiation (GO:0048235);; Biological Process: shoot system development (GO:0048367);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: protein complex subunit organization (GO:0071822);; Cellular Component: cell periphery (GO:0071944);; Biological Process: regulation of primary metabolic process (GO:0080090);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: mitogen-activated protein kinase kinase kinase 2 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; cellular component: organelle part (GO:0044422);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414)"]
["Bra033239","Bra033239",93.401296,5771,110.832761,6853,101.254856,5811,69.054052,3011,65.921919,2725,61.211493,2576,{"v":1.20735512817078e-09,"d":"1.21E-09"},-1.20224104259014,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAC002 PE=2 SV=2","S","Function unknown","PREDICTED: NAC domain-containing protein 2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra004479","Bra004479",75.368968,7322,82.584497,8156,83.431807,7548,54.038246,3657,38.878846,2563,39.140426,2608,{"v":1.55680123932939e-09,"d":"1.56E-09"},-1.43288355798531,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: activation of MAPKK activity (GO:0000186);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nematode (GO:0009624);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: cuticle development (GO:0042335);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: anther development (GO:0048653);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K13436|0|brp:103866406|K13436 pto-interacting protein 1 [EC:2.7.11.1] | (RefSeq) probable receptor-like protein kinase At2g47060","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana OX=3702 GN=At2g47060 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable receptor-like protein kinase At2g47060 [Brassica rapa]","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra022099","Bra022099",1.672091,60,1.892885,68,2.646461,87,8.029224,202,6.71813,163,8.362792,204,0.000700355249236226,1.29755199746215,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","zinc-finger of the FCS-type, C2-C2","Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103853774 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra018656","Bra018656",19.960857,2506,73.395264,9297,62.988525,7315,4.468913,397,4.237706,363,4.595772,396,{"v":1.31005564126382e-14,"d":"1.31E-14"},-3.9533976947582,"down","[P]","Inorganic ion transport and metabolism","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Biological Process: nitrate transport (GO:0015706);; Biological Process: lateral root development (GO:0048527);; Biological Process: cellular response to nitrate (GO:0071249);; Biological Process: response to karrikin (GO:0080167);; ","K02575|0|brp:103871557|K02575 MFS transporter, NNP family, nitrate/nitrite transporter | (RefSeq) NRT2.2, NRT2.1; high-affinity nitrate transporter 2.1","Nitrogen metabolism (ko00910)","--","--","Major Facilitator Superfamily","High-affinity nitrate transporter 2.1 OS=Arabidopsis thaliana OX=3702 GN=NRT2.1 PE=1 SV=1","P","Inorganic ion transport and metabolism","high-affinity nitrate transporter 2.1-like [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra017627","Bra017627",11.772956,1263,17.033466,1831,23.021365,1990,6.548765,480,8.673511,640,9.405365,698,{"v":1.7771500499181e-05,"d":"1.78E-05"},-1.53024596454977,"down","[T]","Signal transduction mechanisms","Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: cell redox homeostasis (GO:0045454);; ","--","--","--","--","CBS domain","CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1","S","Function unknown","PREDICTED: CBS domain-containing protein CBSX2, chloroplastic-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra033397","Bra033397",4.067528,293,6.796242,483,7.873821,513,2.56235,128,0.297749,16,0.247293,14,0.00104170887232984,-2.73371814190446,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: cytosol (GO:0005829);; Biological Process: aging (GO:0007568);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: post-embryonic development (GO:0009791);; Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity (GO:0009815);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: fruit development (GO:0010154);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Biological Process: chlorophyll catabolic process (GO:0015996);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana OX=3702 GN=2A6 PE=2 SV=2","S","Function unknown","PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 5-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414)"]
["Bra010292","Bra010292",10.465161,695,17.114139,977,20.477175,1022,50.184508,1948,82.399996,3238,105.017148,3718,{"v":3.53491253393358e-05,"d":"3.53E-05"},1.60784506656268,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: aging (GO:0007568);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to auxin (GO:0009733);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: plant-type cell wall loosening (GO:0009828);; Biological Process: xylem development (GO:0010089);; Biological Process: response to chitin (GO:0010200);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Molecular Function: xyloglucan-specific endo-beta-1,4-glucanase activity (GO:0033946);; Biological Process: cell wall modification (GO:0042545);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: primary root development (GO:0080022);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0080039);; ","K08235|6.38425e-161|brp:103834679|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) xyloglucan endotransglucosylase/hydrolase protein 24-like","--","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=3702 GN=XTH24 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 24-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576);; biological process: multicellular organismal process (GO:0032501)"]
["Bra033785","Bra033785",8.750499,1643,24.390798,4577,25.138735,4323,7.997241,1060,6.962879,852,6.676329,812,{"v":4.85605915097517e-05,"d":"4.86E-05"},-1.97541146531792,"down","[V]","Defense mechanisms","Biological Process: sulfate assimilation (GO:0000103);; Biological Process: nuclear division (GO:0000280);; Molecular Function: UDP-glucose transmembrane transporter activity (GO:0005460);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: transport (GO:0006810);; Biological Process: nucleolus organization (GO:0007000);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: cellular process (GO:0009987);; Biological Process: response to aluminum ion (GO:0010044);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: vesicle membrane (GO:0012506);; Biological Process: UDP-glucose transport (GO:0015786);; Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; ","--","--","[IR]","Lipid transport and metabolism;; General function prediction only","ABC transporter;; ABC-2 family transporter protein;; AAA domain, putative AbiEii toxin, Type IV TA system","ABC transporter A family member 7 OS=Arabidopsis thaliana OX=3702 GN=ABCA7 PE=3 SV=2","V","Defense mechanisms","PREDICTED: ABC transporter A family member 7-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra032162","Bra032162",3.169214,248,3.474569,266,4.131568,291,0.790754,54,0.614778,33,0.377553,22,{"v":1.1820114207934e-10,"d":"1.18E-10"},-2.85255521784183,"down","[I]","Lipid transport and metabolism","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: multicellular organism development (GO:0007275);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to lithium ion (GO:0010226);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: single-organism developmental process (GO:0044767);; Cellular Component: apoplast (GO:0048046);; Biological Process: anatomical structure development (GO:0048856);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana OX=3702 GN=At2g23540 PE=2 SV=1","S","Function unknown","GDSL esterase/lipase At2g23540 [Brassica napus]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987)"]
["Bra010586","Bra010586",2.44635,372,6.292417,1000,6.572294,931,2.397346,278,2.055813,234,3.624283,387,0.00912610653879192,-1.39120744248446,"down","[J]","Translation, ribosomal structure and biogenesis","Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: proteolysis (GO:0006508);; Molecular Function: metalloexopeptidase activity (GO:0008235);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: membrane (GO:0016020);; Biological Process: dolichol biosynthetic process (GO:0019408);; Biological Process: N-terminal protein amino acid modification (GO:0031365);; Biological Process: single-multicellular organism process (GO:0044707);; ","--","--","--","--","--","Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana OX=3702 GN=At3g27390 PE=1 SV=2","S","Function unknown","BnaA08g15530D [Brassica napus]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501)"]
["Bra007039","Bra007039",106.286902,15211,92.810443,14244,77.916147,11016,26.982846,2856,14.366652,1076,14.139984,1469,{"v":1.29539486140068e-13,"d":"1.30E-13"},-2.8755396163348,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103841319 [Brassica rapa]","--"]
["Bra036136","Bra036136",19.106495,746,28.295624,1114,26.276712,948,110.844643,3058,67.85276,1802,80.611954,2155,0.000418056898910569,1.22002868299815,"up","--","--","Molecular Function: endopeptidase inhibitor activity (GO:0004866);; Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","Trypsin and protease inhibitor","--","O","Posttranslational modification, protein turnover, chaperones","BnaA09g03390D [Brassica napus]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576)"]
["Bra022905","Bra022905",34.681042,5740,35.251453,5887,29.372005,4497,12.353737,1447,5.380785,607,4.502211,511,{"v":1.53240495840762e-09,"d":"1.53E-09"},-2.61786265931761,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: membrane fusion (GO:0006944);; Biological Process: pollen development (GO:0009555);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to insect (GO:0009625);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: seed germination (GO:0009845);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Receptor like protein kinase S.2 OS=Arabidopsis thaliana OX=3702 GN=LECRKS2 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: receptor like protein kinase S.2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra005227","Bra005227",0.081475,8,0.037285,4,0,0,0.583342,39,1.255416,81,1.128119,73,{"v":9.52971266210868e-05,"d":"9.53E-05"},3.42378393552584,"up","--","--","Biological Process: metabolic process (GO:0008152);; Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: cellular response to stress (GO:0033554);; Molecular Function: UDP-glucosyltransferase activity (GO:0035251);; Biological Process: benzene-containing compound metabolic process (GO:0042537);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana OX=3702 GN=UGT86A1 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 86A1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra037130","Bra037130",0.865345,141,1.283969,181,1.371493,171,6.774754,772,11.290172,1113,9.159601,960,{"v":7.25064496038567e-16,"d":"7.25E-16"},2.42419882093182,"up","[HC]","Coenzyme transport and metabolism;; Energy production and conversion","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Molecular Function: zeaxanthin epoxidase [overall] activity (GO:0009540);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development (GO:0009790);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to red light (GO:0010114);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Cellular Component: membrane (GO:0016020);; Biological Process: xanthophyll biosynthetic process (GO:0016123);; Biological Process: electron transport chain (GO:0022900);; Cellular Component: chloroplast membrane (GO:0031969);; Biological Process: multicellular organismal water homeostasis (GO:0050891);; Biological Process: regulation of cell division (GO:0051302);; Molecular Function: zeaxanthin epoxidase activity (GO:0052662);; Molecular Function: antheraxanthin epoxidase activity (GO:0052663);; Biological Process: oxidation-reduction process (GO:0055114);; ","K09838|0|brp:103837729|K09838 zeaxanthin epoxidase [EC:1.14.15.21] | (RefSeq) zeaxanthin epoxidase, chloroplastic-like","Carotenoid biosynthesis (ko00906)","[CR]","Energy production and conversion;; General function prediction only","RWP-RK domain;; FAD binding domain;; FHA domain;; NAD(P)-binding Rossmann-like domain;; FAD binding domain","Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ZEP PE=1 SV=1","CH","Energy production and conversion;; Coenzyme transport and metabolism","PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501)"]
["Bra003583","Bra003583",54.351949,2874,36.719722,1962,44.339261,2157,152.108141,5667,167.485724,6006,184.192102,6656,{"v":3.43171815087518e-14,"d":"3.43E-14"},1.34450777612294,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: RNA methylation (GO:0001510);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; ","K02937|1.44819e-172|bna:106353381|K02937 large subunit ribosomal protein L7e | (RefSeq) 60S ribosomal protein L7-1","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein L30p/L7e;; Ribosomal L30 N-terminal domain","60S ribosomal protein L7-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7A PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L7-1 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; cellular component: macromolecular complex (GO:0032991)"]
["Bra007437","Bra007437",55.234742,3878,136.752613,9729,139.401276,9146,17.144945,836,7.04383,333,4.209113,203,{"v":1.02924453997948e-10,"d":"1.03E-10"},-3.8847162770544,"down","[R]","General function prediction only","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to low fluence blue light stimulus by blue low-fluence system (GO:0010244);; Biological Process: nitrate transport (GO:0015706);; Biological Process: petal morphogenesis (GO:0048446);; ","K06911|2.80437e-112|brp:103841776|K06911 uncharacterized protein | (RefSeq) pirin-1","--","--","--","Pirin C-terminal cupin domain","Pirin-1 OS=Arabidopsis thaliana OX=3702 GN=PRN1 PE=1 SV=1","S","Function unknown","PREDICTED: pirin-1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra007542","Bra007542",0.565648,26,0.823318,39,0.595325,26,4.56039,148,3.430098,107,2.727535,86,0.000188988446077489,1.77313336963879,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: seed germination (GO:0009845);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","[K]","Transcription","GATA zinc finger","GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1","K","Transcription","PREDICTED: GATA transcription factor 4 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra024498","Bra024498",1.961068,84,2.8885,123,2.264152,92,5.668349,171,7.399565,222,10.784687,319,0.00844637424932741,1.15408161457019,"up","[S]","Function unknown","Cellular Component: chloroplast envelope (GO:0009941);; ","--","--","--","--","Domain of unknown function (DUF1990)","UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1","S","Function unknown","PREDICTED: UPF0548 protein At2g17695 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra011611","Bra011611",11.684187,4427,24.757322,9438,33.490586,11528,15.450172,4104,13.173034,3364,14.10643,3630,0.00695415069101793,-1.25585949279237,"down","[R]","General function prediction only","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ARF guanyl-nucleotide exchange factor activity (GO:0005086);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; Biological Process: megagametogenesis (GO:0009561);; Biological Process: gravitropism (GO:0009630);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: embryo development (GO:0009790);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: tissue development (GO:0009888);; Biological Process: vesicle-mediated transport (GO:0016192);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellulose metabolic process (GO:0030243);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: regulation of ARF protein signal transduction (GO:0032012);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: intracellular transport (GO:0046907);; Biological Process: seed development (GO:0048316);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of catalytic activity (GO:0050790);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of cellular component organization (GO:0051128);; Biological Process: multi-organism process (GO:0051704);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K18442|0|brp:103828580|K18442 brefeldin A-inhibited guanine nucleotide-exchange protein | (RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 4","Endocytosis (ko04144)","[U]","Intracellular trafficking, secretion, and vesicular transport","Sec7 domain;; Guanine nucleotide exchange factor in Golgi transport N-terminal;; Domain of unknown function (DUF1981);; Dimerisation and cyclophilin-binding domain of Mon2;; C-terminal region of Mon2 protein","Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana OX=3702 GN=BIG4 PE=3 SV=1","S","Function unknown","PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 4 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; molecular function: guanyl-nucleotide exchange factor activity (GO:0005085);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra029015","Bra029015",0.175797,17,0.074246,8,0.021513,3,1.576624,79,1.185277,67,0.85454,48,0.000252397272551236,2.55600258936984,"up","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: binding (GO:0005488);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to stress (GO:0006950);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: cell part (GO:0044464);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[R]","General function prediction only","Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeat;; Ankyrin repeats (many copies)","Ankyrin repeat-containing protein BDA1 OS=Arabidopsis thaliana OX=3702 GN=BAD1 PE=1 SV=1","S","Function unknown","BnaAnng33650D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra002721","Bra002721",2.626034,252,3.111096,311,2.76715,252,1.325683,96,0.065809,7,0.147636,15,0.00389565946079694,-2.48121238358829,"down","--","--","--","--","--","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; PMR5 N terminal Domain","Protein trichome birefringence-like 35 OS=Arabidopsis thaliana OX=3702 GN=TBL35 PE=2 SV=1","S","Function unknown","PREDICTED: protein trichome birefringence-like 35 isoform X1 [Brassica rapa] ","--"]
["Bra027070","Bra027070",3.869639,193,2.03554,103,1.996514,92,8.613789,303,11.854609,401,10.954171,373,{"v":4.77699739679508e-05,"d":"4.78E-05"},1.43005941560795,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","K15032|0|brp:103838425|K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) uncharacterized LOC103838425","--","[KR]","Transcription;; General function prediction only","mTERF","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103838425 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra036366","Bra036366",0.948871,24,0.541201,14,1.018204,24,5.389465,96,10.36913,177,10.237698,176,{"v":1.1721038160414e-07,"d":"1.17E-07"},2.68149642811201,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra001170","Bra001170",15.357688,272,39.879669,711,38.219208,625,4.709788,59,1.470149,18,0.730539,9,{"v":5.10709418289312e-08,"d":"5.11E-08"},-3.91262786485141,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103859117 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra006288","Bra006288",26.862049,605,26.617157,605,26.138334,545,17.986111,287,12.610544,194,14.248957,220,{"v":2.91576458786368e-08,"d":"2.92E-08"},-1.36511704122072,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103856121 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra005915","Bra005915",8.278403,1276,6.06314,943,7.079503,1009,4.335632,473,4.350348,457,5.024113,531,{"v":2.51161854843898e-11,"d":"2.51E-11"},-1.17988455701342,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: cellular process (GO:0009987);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular protein localization (GO:0034613);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism process (GO:0044699);; Biological Process: long-day photoperiodism, flowering (GO:0048574);; ","--","--","--","--","Plant phosphoribosyltransferase C-terminal;; C2 domain;; Integral peroxisomal membrane peroxin","FT-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=FTIP1 PE=1 SV=1","S","Function unknown","PREDICTED: FT-interacting protein 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra008169","Bra008169",6.752445,361,4.152505,224,5.155076,255,23.552802,914,26.36966,1056,29.546619,1137,{"v":4.06754515794437e-15,"d":"4.07E-15"},1.83537757179559,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: flower development (GO:0009908);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: determination of dorsal/ventral asymmetry (GO:0048262);; ","--","--","--","--","Myb-like DNA-binding domain","Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor MYB1R1-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra002622","Bra002622",27.443987,1827,44.130959,2964,41.705933,2568,13.700419,645,8.295849,376,7.054418,322,{"v":4.99838415670542e-10,"d":"5.00E-10"},-2.466846008046,"down","[G]","Carbohydrate transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K19517|0|brp:103845304|K19517 1D-myo-inositol 3-kinase [EC:2.7.1.64] | (RefSeq) inositol 3-kinase","Inositol phosphate metabolism (ko00562)","[G]","Carbohydrate transport and metabolism","pfkB family carbohydrate kinase","Inositol 3-kinase OS=Arabidopsis thaliana OX=3702 GN=At5g58730 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: inositol 3-kinase [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra038315","Bra038315",0.986897,127,0.757066,98,0.722451,86,3.738591,339,3.427888,299,3.423397,300,{"v":1.84639339941922e-11,"d":"1.85E-11"},1.53968052029356,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: post-embryonic development (GO:0009791);; Molecular Function: polysaccharide binding (GO:0030247);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; PPR repeat;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana OX=3702 GN=At1g69290 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra024180","Bra024180",4.331591,199,2.671201,158,3.078704,130,11.143626,374,10.228483,411,14.847596,493,{"v":9.37290049951399e-08,"d":"9.37E-08"},1.34283767396911,"up","[R]","General function prediction only","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: methylation (GO:0032259);; ","--","--","[J]","Translation, ribosomal structure and biogenesis","Methyltransferase small domain;; Methyltransferase domain;; Ribosomal protein L11 methyltransferase (PrmA);; Methyltransferase domain;; Putative RNA methylase family UPF0020;; Methyltransferase domain;; RNA cap guanine-N2 methyltransferase;; Conserved hypothetical protein 95","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: methyltransferase-like protein 5 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra027957","Bra027957",35.375748,2396,50.371838,3442,54.135593,3391,27.192934,1303,9.594926,443,7.867677,366,0.000119592876399756,-2.10251626887762,"down","--","--","Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","Root cap","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: uncharacterized protein LOC103838713 [Brassica rapa]","cellular component: extracellular region (GO:0005576)"]
["Bra003624","Bra003624",0.352197,10,0.19249,6,0,0,12.06691,236,33.744812,634,32.204063,608,{"v":3.98400861045513e-16,"d":"3.98E-16"},5.85984745851464,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Cellular Component: photosystem II oxygen evolving complex (GO:0009654);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; Biological Process: photosystem II oxygen evolving complex assembly (GO:0010270);; Biological Process: cysteine biosynthetic process (GO:0019344);; ","K03541|4.91371e-86|brp:103830498|K03541 photosystem II 10kDa protein | (RefSeq) PSBR; photosystem II 10 kDa polypeptide, chloroplastic","Photosynthesis (ko00195)","--","--","Photosystem II 10 kDa polypeptide PsbR","Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris OX=3711 GN=PSBR PE=2 SV=1","S","Function unknown","PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699)"]
["Bra040195","Bra040195",0.472905,50,0.317599,40,0.434189,52,1.304554,110,1.842436,143,1.874793,151,0.000197061881642182,1.41988609698319,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: integral component of peroxisomal membrane (GO:0005779);; Biological Process: protein monoubiquitination (GO:0006513);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Molecular Function: protein C-terminus binding (GO:0008022);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: embryonic morphogenesis (GO:0048598);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; ","K13345|0|brp:103848917|K13345 peroxin-12 | (RefSeq) peroxisome biogenesis protein 12","Peroxisome (ko04146)","[O]","Posttranslational modification, protein turnover, chaperones","Pex2 / Pex12 amino terminal region","Peroxisome biogenesis protein 12 OS=Arabidopsis thaliana OX=3702 GN=PEX12 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: LOW QUALITY PROTEIN: peroxisome biogenesis protein 12 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra009281","Bra009281",15.679221,1080,19.192474,1334,16.122562,1028,14.168601,691,7.79672,366,7.960027,376,0.00030530959013924,-1.29937256233973,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: regulation of meristem growth (GO:0010075);; ","--","--","--","--","Protein of unknown function (DUF4005);; IQ calmodulin-binding motif","--","S","Function unknown","protein IQ-DOMAIN 14-like isoform X1 [Brassica napus] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra015666","Bra015666",12.92234,1174,42.702225,3913,40.468243,3400,5.759413,370,4.800323,297,3.926772,245,{"v":1.19930953551974e-09,"d":"1.20E-09"},-3.16494263564004,"down","[S]","Function unknown","--","K07192|0|brp:103832196|K07192 flotillin | (RefSeq) flotillin-like protein 3","--","[UZ]","Intracellular trafficking, secretion, and vesicular transport;; Cytoskeleton","SPFH domain / Band 7 family","Flotillin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FLOT3 PE=2 SV=1","S","Function unknown","PREDICTED: flotillin-like protein 3 [Brassica rapa]","--"]
["Bra011606","Bra011606",103.84346,2861,28.317904,788,30.404633,775,25.972637,507,12.518259,235,13.429604,254,0.000479705626245505,-2.00898249894775,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: cell wall biogenesis (GO:0042546);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828983 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra007298","Bra007298",0.715863,42,0.42424,25,1.14577,62,7.698156,315,16.728449,658,0.951455,38,0.00443030033925343,2.49061475618644,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","hypothetical protein ARALYDRAFT_907164 [Arabidopsis lyrata subsp. lyrata]","--"]
["Bra008763","Bra008763",1.198088,127,0.697601,75,0.368172,32,4.58873,312,8.556756,612,8.204341,593,{"v":1.28384224025828e-06,"d":"1.28E-06"},2.57442803920372,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to blue light (GO:0009637);; Biological Process: shade avoidance (GO:0009641);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to sucrose (GO:0009744);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: red light signaling pathway (GO:0010161);; Biological Process: response to far red light (GO:0010218);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: inflorescence development (GO:0010229);; Cellular Component: cytoplasmic vesicle membrane (GO:0030659);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: transition metal ion binding (GO:0046914);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);; ","--","--","[K]","Transcription","Plastocyanin-like domain;; CCT motif","Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=1 SV=2","K","Transcription","PREDICTED: uncharacterized protein LOC103846490 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)"]
["Bra023206","Bra023206",80.77902,3383,70.075847,2962,67.550094,2617,283.671253,8408,370.936655,10587,336.56855,9663,{"v":9.69114049098806e-24,"d":"9.69E-24"},1.62708421737543,"up","[I]","Lipid transport and metabolism","Molecular Function: fatty-acyl-CoA binding (GO:0000062);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA methylation (GO:0006306);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: lipid transport (GO:0006869);; Biological Process: Golgi organization (GO:0007030);; Cellular Component: glyoxysome (GO:0009514);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Biological Process: response to absence of light (GO:0009646);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: response to lead ion (GO:0010288);; Biological Process: cytosolic transport (GO:0016482);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Molecular Function: phosphatidylcholine binding (GO:0031210);; Molecular Function: lead ion binding (GO:0032791);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: response to freezing (GO:0050826);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","K08762|6.85042e-59|brp:103840220|K08762 diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) | (RefSeq) acyl-CoA-binding protein","--","[I]","Lipid transport and metabolism","Acyl CoA binding protein","Acyl-CoA-binding protein OS=Brassica napus OX=3708 PE=3 SV=1","I","Lipid transport and metabolism","PREDICTED: acyl-CoA-binding protein [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Brassica_rapa_newGene_21965","--",0.653654,90,1.417807,194,1.451366,179,4.38883,360,4.736086,396,4.612048,417,0.00874978496437446,1.20842099899741,"up","--","--","--","--","--","[R]","General function prediction only","Retrotransposon gag protein;; Aspartyl protease","--","--","--","PREDICTED: uncharacterized protein LOC106323768 [Brassica oleracea var. oleracea]","--"]
["Bra001622","Bra001622",2.29779,142,4.476194,244,3.99776,177,0.043964,2,0,0,0,0,{"v":5.22424034361305e-18,"d":"5.22E-18"},-6.86302138894965,"down","--","--","--","--","--","[R]","General function prediction only","ML domain","MD-2-related lipid-recognition protein ROSY1 OS=Arabidopsis thaliana OX=3702 GN=ROSY1 PE=1 SV=1","--","--","PREDICTED: uncharacterized protein LOC103859654 [Brassica rapa] ","--"]
["Bra011068","Bra011068",6.767744,549,14.910875,1221,15.15471,1137,2.842229,164,2.123799,118,3.243071,181,{"v":6.13099954870256e-09,"d":"6.13E-09"},-2.64566656568949,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Biological Process: signal transduction (GO:0007165);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of programmed cell death (GO:0043067);; Cellular Component: cell part (GO:0044464);; Biological Process: innate immune response (GO:0045087);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair elongation (GO:0048767);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K10664|0|brp:103854017|K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ATL42","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-H2 zinc finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger","E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase ATL42 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: growth (GO:0040007)"]
["Bra022095","Bra022095",0.872187,114,1.00428,128,1.359648,162,0.574007,52,0.458151,49,0.598859,64,0.00161949957990414,-1.32694946869598,"down","[T]","Signal transduction mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: anion transport (GO:0006820);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: nitrogen compound transport (GO:0071705);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Salt stress response/antifungal","Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana OX=3702 GN=CRK39 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: putative cysteine-rich receptor-like protein kinase 39 isoform X1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra014696","Bra014696",4.201368,186,6.417425,286,3.075516,126,2.099946,66,1.115179,34,2.308394,70,0.000590286183572359,-1.78043397065541,"down","--","--","Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: catalytic activity (GO:0003824);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular component organization (GO:0016043);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: system development (GO:0048731);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103863107 [Brassica rapa]","biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra005822","Bra005822",1.439831,86,1.114635,68,0.988245,55,4.441222,185,6.170241,249,4.498953,166,{"v":2.12484484926124e-05,"d":"2.12E-05"},1.45802740090944,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103855587 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra005961","Bra005961",63.675452,12107,133.855595,25669,120.67188,21187,62.745806,8421,38.386464,4945,37.289754,4826,{"v":6.36745985847705e-05,"d":"6.37E-05"},-1.73258007796894,"down","[IR]","Lipid transport and metabolism;; General function prediction only","Molecular Function: NAD+ kinase activity (GO:0003951);; Molecular Function: diacylglycerol kinase activity (GO:0004143);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: membrane fusion (GO:0006944);; Biological Process: protein kinase C-activating G-protein coupled receptor signaling pathway (GO:0007205);; Biological Process: response to cold (GO:0009409);; Biological Process: response to wounding (GO:0009611);; Biological Process: phosphorylation (GO:0016310);; Biological Process: intracellular signal transduction (GO:0035556);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: leaf development (GO:0048366);; Biological Process: lateral root development (GO:0048527);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; ","K00901|0|brp:103855751|K00901 diacylglycerol kinase (ATP) [EC:2.7.1.107] | (RefSeq) diacylglycerol kinase 1-like","Glycerolipid metabolism (ko00561);; Glycerophospholipid metabolism (ko00564);; Phosphatidylinositol signaling system (ko04070)","[IT]","Lipid transport and metabolism;; Signal transduction mechanisms","Diacylglycerol kinase accessory domain;; Diacylglycerol kinase catalytic domain;; Phorbol esters/diacylglycerol binding domain (C1 domain)","Diacylglycerol kinase 1 OS=Arabidopsis thaliana OX=3702 GN=DGK1 PE=1 SV=2","I","Lipid transport and metabolism","PREDICTED: diacylglycerol kinase 1-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra009322","Bra009322",10.042316,1681,6.630969,1132,7.872626,1218,28.062648,3382,26.506809,3165,31.88183,3932,{"v":4.65085285159043e-12,"d":"4.65E-12"},1.33278149024218,"up","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: porphyrin-containing compound biosynthetic process (GO:0006779);; Biological Process: signal transduction (GO:0007165);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: response to iron ion (GO:0010039);; Biological Process: fruit dehiscence (GO:0010047);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: response to red light (GO:0010114);; Biological Process: fruit development (GO:0010154);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: pigment biosynthetic process (GO:0046148);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: carpel development (GO:0048440);; Biological Process: cellular response to inorganic substance (GO:0071241);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2","K","Transcription","PREDICTED: transcription factor BIM1 isoform X1 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501)"]
["Bra014891","Bra014891",11.037862,2012,23.404598,4456,30.030511,5126,13.183937,1994,8.681059,1204,9.39987,907,0.00341766183175951,-1.53518111552142,"down","[F]","Nucleotide transport and metabolism","--","K01937|0|brp:103828798|K01937 CTP synthase [EC:6.3.4.2] | (RefSeq) CTP synthase-like","Pyrimidine metabolism (ko00240)","[F]","Nucleotide transport and metabolism","CTP synthase N-terminus;; Glutamine amidotransferase class-I;; Peptidase C26","--","F","Nucleotide transport and metabolism","PREDICTED: CTP synthase-like [Brassica rapa] ","--"]
["Bra007472","Bra007472",2.540828,172,5.903578,402,6.369986,378,0,0,0,0,0,0,{"v":7.88585018220388e-20,"d":"7.89E-20"},-8.22329745373072,"down","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: defense response (GO:0006952);; Molecular Function: alcohol dehydrogenase (NADP+) activity (GO:0008106);; Biological Process: response to cold (GO:0009409);; Cellular Component: plastid (GO:0009536);; Biological Process: response to organic substance (GO:0010033);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0033764);; Biological Process: cuticle development (GO:0042335);; Molecular Function: (+)-neomenthol dehydrogenase activity (GO:0047501);; Molecular Function: (-)-menthol dehydrogenase activity (GO:0047504);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to karrikin (GO:0080167);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","short chain dehydrogenase;; Enoyl-(Acyl carrier protein) reductase;; KR domain;; NAD dependent epimerase/dehydratase family","(+)-neomenthol dehydrogenase OS=Arabidopsis thaliana OX=3702 GN=SDR1 PE=1 SV=1","S","Function unknown","PREDICTED: (+)-neomenthol dehydrogenase-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; biological process: developmental process (GO:0032502)"]
["Bra013978","Bra013978",1.118247,153,1.211149,172,1.479289,206,0.074934,9,0,0,0.091639,10,{"v":2.90929809039992e-08,"d":"2.91E-08"},-4.30269059090754,"down","--","--","Molecular Function: RNA polymerase II transcription factor activity, sequence-specific DNA binding (GO:0000981);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: regulation of glycolytic process (GO:0006110);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: regulation of floral meristem growth (GO:0010080);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: maintenance of shoot apical meristem identity (GO:0010492);; Biological Process: triglyceride biosynthetic process (GO:0019432);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: organ growth (GO:0035265);; Biological Process: positive regulation of fatty acid biosynthetic process (GO:0045723);; Biological Process: seed development (GO:0048316);; Biological Process: root development (GO:0048364);; Biological Process: plant ovule development (GO:0048481);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: leaf phyllotactic patterning (GO:0060772);; Biological Process: auxin mediated signaling pathway involved in phyllotactic patterning (GO:0060774);; Biological Process: positive regulation of cutin biosynthetic process (GO:1901959);; ","K09285|0|brp:103833171|K09285 AP2-like factor, ANT lineage | (RefSeq) AP2-like ethylene-responsive transcription factor BBM2","--","--","--","AP2 domain","AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708 GN=BBM2 PE=2 SV=1","K","Transcription","AP2-like ethylene-responsive transcription factor BBM2 [Brassica napus] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: reproduction (GO:0000003);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: signaling (GO:0023052)"]
["Bra006335","Bra006335",16.802409,2811,20.950554,3539,23.333929,3610,12.995135,1539,7.12099,812,7.338549,841,{"v":3.94962757601469e-06,"d":"3.95E-06"},-1.68092231895794,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: cell tip growth (GO:0009932);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: meristem initiation (GO:0010014);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: leaf senescence (GO:0010150);; Biological Process: pollen maturation (GO:0010152);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: anther development (GO:0048653);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: defense response to virus (GO:0051607);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cell wall organization (GO:0071555);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat N-terminal domain;; Leucine Rich repeats (2 copies);; Leucine rich repeat","Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: protein NSP-INTERACTING KINASE 1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425)"]
["Bra010318","Bra010318",1.593406,154,3.987607,445,3.733596,344,1.262036,88,1.100607,67,0.796193,75,0.000163820604970204,-2.02812523156613,"down","[R]","General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: response to chitin (GO:0010200);; Biological Process: histone H3-K36 methylation (GO:0010452);; Molecular Function: kinase activity (GO:0016301);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone H3-K4 methylation (GO:0051568);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; ","--","--","--","--","U-box domain;; Oligosaccharyltransferase subunit 5","U-box domain-containing protein 56 OS=Arabidopsis thaliana OX=3702 GN=PUB56 PE=2 SV=1","--","--","PREDICTED: U-box domain-containing protein 56-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra017271","Bra017271",2.784217,288,5.536237,582,3.987816,389,14.078414,1019,25.759796,1796,25.451732,1854,{"v":6.0981428334838e-05,"d":"6.10E-05"},1.75969171464407,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein metabolic process (GO:0019538);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Clp amino terminal domain, pathogenicity island component","Protein SMAX1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=SMXL3 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: protein SMAX1-LIKE 3-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152)"]
["Bra028147","Bra028147",108.649661,4223,200.270195,8176,223.207024,8394,76.25698,2103,48.49894,1357,50.19191,1348,{"v":2.76881177848596e-07,"d":"2.77E-07"},-2.14346075995252,"down","--","--","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: phospholipid binding (GO:0005543);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: GTPase activator activity (GO:0008060);; Biological Process: protein secretion (GO:0009306);; Biological Process: pollen development (GO:0009555);; Biological Process: cell growth (GO:0016049);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: endosomal transport (GO:0016197);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[R]","General function prediction only","C2 domain","Protein C2-DOMAIN ABA-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=CAR1 PE=1 SV=1","S","Function unknown","PREDICTED: protein C2-DOMAIN ABA-RELATED 1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: metabolic process (GO:0008152)"]
["Bra013682","Bra013682",0.597762,37,0.20504,54,0.542101,70,10.359992,657,16.799253,1250,13.12012,1009,{"v":1.34963954311297e-19,"d":"1.35E-19"},3.95385408787724,"up","--",null,"Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: response to chitin (GO:0010200);; Biological Process: programmed cell death (GO:0012501);; Molecular Function: kinase activity (GO:0016301);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Domain of unknown function (DUF4283);; Salt stress response/antifungal;; Phosphotransferase enzyme family;; Zinc knuckle;; Haspin like kinase domain","Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CRK24 PE=3 SV=2","T","Signal transduction mechanisms","PREDICTED: cysteine-rich receptor-like protein kinase 24 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra003939","Bra003939",98.064682,5385,125.211555,6938,102.392761,5201,6.408512,249,0.253162,11,0.699432,29,{"v":7.10419508914192e-10,"d":"7.10E-10"},-5.14840903356865,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: defense response (GO:0006952);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: type I hypersensitivity (GO:0016068);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","--","--","Pathogenesis-related protein Bet v I family;; Polyketide cyclase / dehydrase and lipid transport","MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1","S","Function unknown","PREDICTED: MLP-like protein 34 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra036463","Bra036463",9.317584,2204,19.214778,4581,20.52865,4513,7.47621,1267,8.568513,1358,9.23883,1402,0.000174748859913006,-1.53793240670031,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: amino acid transport (GO:0006865);; Biological Process: cytokinin biosynthetic process (GO:0009691);; ","--","--","--","--","DENN (AEX-3) domain;; uDENN domain","DENN domain and WD repeat-containing protein SCD1 OS=Arabidopsis thaliana OX=3702 GN=SCD1 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103828185 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra040254","Bra040254",1.192728,234,0.619662,126,0.887431,163,5.400459,693,3.609924,461,4.167921,534,{"v":2.77504734178143e-07,"d":"2.78E-07"},1.62640742447581,"up","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: karyogamy (GO:0000741);; Biological Process: response to hypoxia (GO:0001666);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: single-stranded RNA binding (GO:0003727);; Molecular Function: ATP-dependent peptidase activity (GO:0004176);; Molecular Function: serine-type endopeptidase activity (GO:0004252);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cytosol (GO:0005829);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: misfolded or incompletely synthesized protein catabolic process (GO:0006515);; Biological Process: mitochondrion organization (GO:0007005);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Biological Process: protein import into peroxisome matrix, docking (GO:0016560);; Biological Process: cellular response to oxidative stress (GO:0034599);; Biological Process: growth (GO:0040007);; Cellular Component: mitochondrial nucleoid (GO:0042645);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: lateral root development (GO:0048527);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: chaperone-mediated protein complex assembly (GO:0051131);; Biological Process: protein homooligomerization (GO:0051260);; Molecular Function: mitochondrial light strand promoter anti-sense binding (GO:0070361);; Biological Process: oxidation-dependent protein catabolic process (GO:0070407);; Biological Process: regulation of mitochondrial DNA replication (GO:0090296);; ","K08675|0|brp:103850014|K08675 Lon-like ATP-dependent protease [EC:3.4.21.-] | (RefSeq) lon protease homolog 4, chloroplastic/mitochondrial-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Lon protease (S16) C-terminal proteolytic domain;; ATP-dependent protease La (LON) substrate-binding domain;; ATPase family associated with various cellular activities (AAA);; AAA domain (Cdc48 subfamily);; AAA domain (dynein-related subfamily);; PrkA AAA domain;; Holliday junction DNA helicase ruvB N-terminus","Lon protease homolog 4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LON4 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: lon protease homolog 4, chloroplastic/mitochondrial-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: nucleoid (GO:0009295);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007)"]
["Bra013732","Bra013732",108.553912,6989,113.529625,7547,107.608021,6597,74.735651,3425,55.05518,2484,53.295472,2420,{"v":3.61332825937587e-10,"d":"3.61E-10"},-1.39045472648391,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ion transport (GO:0006811);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to virus (GO:0009615);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of multi-organism process (GO:0043900);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 PE=1 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 53 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle part (GO:0044422)"]
["Bra019846","Bra019846",48.273737,2836,11.745891,698,12.037331,654,11.354976,471,3.563248,146,3.888632,160,0.00111273277063925,-2.21120177799412,"down","[G]","Carbohydrate transport and metabolism","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to low light intensity stimulus (GO:0009645);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: response to chitin (GO:0010200);; Biological Process: xyloglucan metabolic process (GO:0010411);; Cellular Component: membrane (GO:0016020);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Molecular Function: xyloglucan-specific endo-beta-1,4-glucanase activity (GO:0033946);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0080039);; ","K08235|0|brp:103871910|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) probable xyloglucan endotransglucosylase/hydrolase protein 8","--","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana OX=3702 GN=XTH8 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824)"]
["Bra001866","Bra001866",6.11717,1757,5.659563,1428,6.417209,1512,19.752158,3426,23.576235,4169,19.863223,3433,{"v":1.88973101244234e-11,"d":"1.89E-11"},1.17781486091161,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: regulation of circadian rhythm (GO:0042752);; Biological Process: long-day photoperiodism, flowering (GO:0048574);; ","--","--","--","--","--","Protein TIME FOR COFFEE OS=Arabidopsis thaliana OX=3702 GN=TIC PE=1 SV=2","S","Function unknown","PREDICTED: protein TIME FOR COFFEE-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra026395","Bra026395",26.808043,2388,45.574181,4096,35.670277,2939,4.64916,293,2.441709,149,2.057006,126,{"v":6.71266847353302e-21,"d":"6.71E-21"},-3.99407481384968,"down","[S]","Function unknown","Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Biological Process: cell plate assembly (GO:0000919);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA replication (GO:0006260);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: response to hormone (GO:0009725);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: epidermal cell differentiation (GO:0009913);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: histone modification (GO:0016570);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: cell wall modification (GO:0042545);; Molecular Function: anion binding (GO:0043168);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: cortical microtubule organization (GO:0043622);; Biological Process: positive regulation of protein kinase activity (GO:0045860);; Biological Process: protein autophosphorylation (GO:0046777);; Cellular Component: apoplast (GO:0048046);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; RIO1 family","Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: mitogen-activated protein kinase kinase kinase ANP1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; cellular component: extracellular region (GO:0005576)"]
["Bra039310","Bra039310",1.778866,253,2.73825,406,2.659853,401,1.402357,156,1.357788,137,1.824459,198,0.00474194768005636,-1.16004256518872,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; ","--","--","[R]","General function prediction only","Glycosyl transferase family 90","--","S","Function unknown","PREDICTED: O-glucosyltransferase rumi homolog isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra007798","Bra007798",32.812927,3490,101.125799,10879,78.197228,7705,7.808387,609,1.961327,142,2.52132,200,{"v":1.21017858824387e-11,"d":"1.21E-11"},-4.29571012487728,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to chitin (GO:0010200);; ","--","--","--","--","N-terminal C2 in EEIG1 and EHBP1 proteins","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842187 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra024352","Bra024352",2.71274,263,2.370546,228,2.772492,228,7.984148,542,6.718331,437,8.438629,566,{"v":1.48072010056748e-06,"d":"1.48E-06"},1.04550439829614,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: N-terminal protein myristoylation (GO:0006499);; ","--","--","--","--","--","Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103873934 isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra014295","Bra014295",37.363682,2581,21.181711,1477,16.109394,1030,19.505262,954,14.080368,663,14.082144,667,0.00150139664992533,-1.13962832390914,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: MAP kinase kinase activity (GO:0004708);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA replication (GO:0006260);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: floral organ abscission (GO:0010227);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Biological Process: histone methylation (GO:0016571);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: positive regulation of cellular protein metabolic process (GO:0032270);; Molecular Function: histone serine kinase activity (GO:0035174);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: histone-serine phosphorylation (GO:0035404);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: protein complex (GO:0043234);; Biological Process: regulation of multi-organism process (GO:0043900);; Cellular Component: cytoskeletal part (GO:0044430);; Biological Process: gametophyte development (GO:0048229);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: protein complex subunit organization (GO:0071822);; Biological Process: regulation of stomatal complex patterning (GO:2000037);; Biological Process: regulation of stomatal complex development (GO:2000038);; ","K13413|0|brp:103832833|K13413 mitogen-activated protein kinase kinase 4/5 [EC:2.7.12.2] | (RefSeq) mitogen-activated protein kinase kinase 4-like","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Phosphotransferase enzyme family","Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana OX=3702 GN=MKK4 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: mitogen-activated protein kinase kinase 4-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422)"]
["Bra004343","Bra004343",5.081933,357,5.400021,376,5.552613,369,0.505897,47,0.160132,15,0.526144,25,{"v":1.35964774956467e-14,"d":"1.36E-14"},-3.58265158368273,"down","--","--","Molecular Function: peroxidase activity (GO:0004601);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: lignin biosynthetic process (GO:0009809);; Molecular Function: heme binding (GO:0020037);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: response to stimulus (GO:0050896);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00430|0|brp:103831297|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 11","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 11 OS=Arabidopsis thaliana OX=3702 GN=PER11 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 11 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987)"]
["Bra000247","Bra000247",0.36482,77,0.153697,33,0.170867,33,1.315087,129,6.65631,936,4.830553,695,{"v":3.19425936665693e-06,"d":"3.19E-06"},3.29347995530751,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103858004 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054)"]
["Bra004856","Bra004856",3.976597,307,3.087066,247,3.061716,210,9.668912,549,11.867456,645,13.701811,747,{"v":3.53599488258106e-08,"d":"3.54E-08"},1.29701027647065,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: protein kinase CK2 complex (GO:0005956);; Biological Process: RNA processing (GO:0006396);; Molecular Function: transcription factor binding (GO:0008134);; Molecular Function: protein kinase regulator activity (GO:0019887);; Biological Process: positive regulation of circadian rhythm (GO:0042753);; Biological Process: regulation of protein kinase activity (GO:0045859);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: regulation of protein serine/threonine kinase activity (GO:0071900);; ","K03115|8.42341e-139|brp:103866823|K03115 casein kinase II subunit beta | (RefSeq) putative casein kinase II subunit beta-4","Ribosome biogenesis in eukaryotes (ko03008);; Circadian rhythm - plant (ko04712)","[TDK]","Signal transduction mechanisms;; Cell cycle control, cell division, chromosome partitioning;; Transcription","Casein kinase II regulatory subunit","Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana OX=3702 GN=CKB4 PE=1 SV=1","DKT","Cell cycle control, cell division, chromosome partitioning;; Transcription;; Signal transduction mechanisms","PREDICTED: putative casein kinase II subunit beta-4 isoform X3 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; biological process: response to stimulus (GO:0050896)"]
["Bra022543","Bra022543",0.410126,70,1.147826,154,0.762803,119,0.064979,9,0,0,0.066213,8,{"v":1.42883170442697e-05,"d":"1.43E-05"},-3.7626903251758,"down","[T]","Signal transduction mechanisms","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: response to molecule of fungal origin (GO:0002238);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to stress (GO:0006950);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: kinase activity (GO:0016301);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: ligase activity (GO:0016874);; Biological Process: root development (GO:0048364);; Biological Process: developmental growth (GO:0048589);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; U-box domain;; Universal stress protein family","Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana OX=3702 GN=PUB53 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: putative U-box domain-containing protein 53 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007)"]
["Bra002726","Bra002726",14.31639,1428,25.237137,2540,19.966118,1842,8.617816,608,5.463179,372,5.473177,374,{"v":2.18820618529474e-08,"d":"2.19E-08"},-2.12521168132059,"down","[MDT]","Cell wall/membrane/envelope biogenesis;; Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms","Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: thylakoid (GO:0009579);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: protein catabolic process (GO:0030163);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: response to chemical (GO:0042221);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular catabolic process (GO:0044248);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Cellular Component: cell periphery (GO:0071944);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Domain associated at C-terminal with AAA;; ATPase family associated with various cellular activities (AAA)","AAA-ATPase At5g57480 OS=Arabidopsis thaliana OX=3702 GN=At5g57480 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: AAA-ATPase At5g57480 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502)"]
["Bra036763","Bra036763",6.87361,273,6.009841,241,3.473386,128,16.369843,459,21.043692,568,21.163992,574,0.000139304391230638,1.27250672448284,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: karyogamy (GO:0000741);; Cellular Component: chromatin (GO:0000785);; Biological Process: RNA methylation (GO:0001510);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: ribosome (GO:0005840);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: chromatin assembly or disassembly (GO:0006333);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: rRNA processing (GO:0006364);; Biological Process: translation (GO:0006412);; Biological Process: protein import into nucleus (GO:0006606);; Biological Process: response to cold (GO:0009409);; Biological Process: pollen development (GO:0009555);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: chloroplast relocation (GO:0009902);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: rRNA binding (GO:0019843);; Molecular Function: structural constituent of chromatin (GO:0030527);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","K02888|1.53063e-119|brp:103833583|K02888 large subunit ribosomal protein L21 | (RefSeq) 50S ribosomal protein L21, chloroplastic","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal prokaryotic L21 protein","50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL21 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: 50S ribosomal protein L21, chloroplastic [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: structural molecule activity (GO:0005198);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra013512","Bra013512",8.705629,756,17.540724,1528,16.759472,1341,4.802001,294,1.238409,73,1.019545,61,{"v":9.25931106256299e-06,"d":"9.26E-06"},-2.93305820877814,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to salt stress (GO:0009651);; Biological Process: gibberellin metabolic process (GO:0009685);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity (GO:0009815);; Biological Process: cell wall modification involved in abscission (GO:0009830);; Biological Process: seed germination (GO:0009845);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: animal organ senescence (GO:0010260);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Molecular Function: gibberellin 3-beta-dioxygenase activity (GO:0016707);; Molecular Function: ion binding (GO:0043167);; Molecular Function: gibberellin 20-oxidase activity (GO:0045544);; Biological Process: shoot system development (GO:0048367);; Molecular Function: C-19 gibberellin 2-beta-dioxygenase activity (GO:0052634);; Molecular Function: C-20 gibberellin 2-beta-dioxygenase activity (GO:0052635);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to fatty acid (GO:0071398);; ","K04125|4.53383e-130|brp:103858857|K04125 gibberellin 2-oxidase [EC:1.14.11.13] | (RefSeq) gibberellin 2-beta-dioxygenase 8","Diterpenoid biosynthesis (ko00904)","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily","Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana OX=3702 GN=GA2OX8 PE=1 SV=2","S","Function unknown","PREDICTED: gibberellin 2-beta-dioxygenase 8 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; molecular function: binding (GO:0005488)"]
["Bra033869","Bra033869",1.81859,154,2.800502,263,3.808664,344,0.940364,62,0.672943,32,0.708629,41,{"v":4.05828375170266e-06,"d":"4.06E-06"},-2.46738356101511,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Molecular Function: water channel activity (GO:0015250);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: lateral root development (GO:0048527);; ","--","--","--","--","Transcription factor regulating root and shoot growth via Pin3;; Transcription factor BRX N-terminal domain","Protein BREVIS RADIX OS=Arabidopsis thaliana OX=3702 GN=BRX PE=1 SV=2","S","Function unknown","BnaA05g16600D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra026887","Bra026887",2.701149,110,1.056236,44,1.084259,41,4.804469,138,7.353187,203,7.780213,268,0.00309059034269276,1.57218255383401,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: RNA processing (GO:0006396);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: meiosis I (GO:0007127);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone methylation (GO:0016571);; Biological Process: protein deubiquitination (GO:0016579);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","--","--","FBD;; F-box domain","F-box/FBD/LRR-repeat protein At1g13780 OS=Arabidopsis thaliana OX=3702 GN=At1g13780 PE=2 SV=1","S","Function unknown","BnaC08g40160D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra033284","Bra033284",4.457191,447,7.464155,790,7.412838,711,3.14236,234,4.147796,295,2.607266,179,0.000322924983807052,-1.49831076612843,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular process (GO:0009987);; Cellular Component: cell part (GO:0044464);; ","--","--","--","--","Protein of unknown function (DUF4005);; IQ calmodulin-binding motif","Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana OX=3702 GN=IQD1 PE=1 SV=1","S","Function unknown","PREDICTED: protein IQ-DOMAIN 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)"]
["Bra032823","Bra032823",0.902259,80,1.05375,102,0.692544,60,2.944435,190,4.327601,274,4.184324,261,{"v":5.3586595700983e-05,"d":"5.36E-05"},1.50204541579997,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: transcription, DNA-templated (GO:0006351);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf shaping (GO:0010358);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: anther development (GO:0048653);; ","--","--","--","--","SBP domain","Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=SPL10 PE=2 SV=2","K","Transcription","PREDICTED: squamosa promoter-binding-like protein 10 isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414)"]
["Bra031061","Bra031061",197.297028,3254,421.436127,7014,395.726105,6037,122.872375,1434,55.519337,624,55.975037,633,{"v":1.75626614139641e-07,"d":"1.76E-07"},-2.58099397850203,"down","--","--","Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to chitin (GO:0010200);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[L]","Replication, recombination and repair","--","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103842668 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Brassica_rapa_newGene_20419","--",10.223088,1834,12.026473,2179,13.858626,2265,1.5602,205,0.567508,70,0.607109,85,{"v":8.74648903787637e-19,"d":"8.75E-19"},-4.04251417956347,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: transport (GO:0006810);; Cellular Component: membrane (GO:0016020);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","AP2 domain","Syntaxin-112 OS=Arabidopsis thaliana OX=3702 GN=SYP112 PE=2 SV=2","K","Transcription","PREDICTED: ethylene-responsive transcription factor 13-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020)"]
["Bra030765","Bra030765",33.420614,2829,21.714896,2647,26.595781,2184,20.570089,1326,13.550406,948,19.109309,1067,{"v":1.75683724763909e-10,"d":"1.76E-10"},-1.23619603078433,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosol (GO:0005829);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein import into nucleus (GO:0006606);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Molecular Function: protein transporter activity (GO:0008565);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Biological Process: cellular component organization (GO:0016043);; Biological Process: modulation by virus of host morphology or physiology (GO:0019048);; Biological Process: symbiont intracellular protein transport in host (GO:0030581);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Biological Process: single-organism developmental process (GO:0044767);; Cellular Component: perinuclear region of cytoplasm (GO:0048471);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: system development (GO:0048731);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: response to other organism (GO:0051707);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: host response to induction by symbiont of tumor, nodule or growth in host (GO:0080034);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Armadillo/beta-catenin-like repeat;; HEAT-like repeat;; Importin beta binding domain;; HEAT repeats;; Atypical Arm repeat;; HEAT repeat;; Armadillo-like;; V-ATPase subunit H;; Rapamycin-insensitive companion of mTOR, domain 5;; Catenin-beta-like, Arm-motif containing nuclear","Importin subunit alpha-4 OS=Arabidopsis thaliana OX=3702 GN=IMPA4 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: importin subunit alpha-4 isoform X1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra009090","Bra009090",78.715101,12995,133.296265,21785,146.108272,21674,53.029856,6989,44.989155,5392,39.079759,4992,{"v":6.74456455166732e-07,"d":"6.74E-07"},-1.75052686575622,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: response to chitin (GO:0010200);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","TFIIS helical bundle-like domain","Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis thaliana OX=3702 GN=MED26B PE=2 SV=1","S","Function unknown","PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra039755","Bra039755",33.555376,2046,39.473855,2248,37.968022,2077,11.89164,493,25.852624,1039,30.406268,1243,0.00356506397424313,-1.21784735825607,"down","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: nucleotide binding (GO:0000166);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to karrikin (GO:0080167);; ","K08081|0|brp:103852316|K08081 tropinone reductase I [EC:1.1.1.206] | (RefSeq) tropinone reductase homolog At1g07440-like","Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)","[R]","General function prediction only","Enoyl-(Acyl carrier protein) reductase;; short chain dehydrogenase;; KR domain","Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana OX=3702 GN=At1g07440 PE=1 SV=1","S","Function unknown","PREDICTED: tropinone reductase homolog At1g07440-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Brassica_rapa_newGene_6284","--",80.571869,9390,17.662722,2078,32.770027,3533,24.340967,2007,17.207842,1366,19.903933,1590,0.00385601108014267,-1.51122072269561,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: chloroplast (GO:0009507);; Biological Process: alkaloid biosynthetic process (GO:0009821);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: strictosidine synthase activity (GO:0016844);; ","--","--","[R]","General function prediction only","Strictosidine synthase;; SMP-30/Gluconolaconase/LRE-like region","Protein STRICTOSIDINE SYNTHASE-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=SSL8 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 8-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)"]
["Bra026089","Bra026089",2.796198,347,1.090095,152,1.8491,225,0.777494,74,0.618082,61,1.214199,106,0.000471283797733453,-1.55861899558655,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: iron ion transmembrane transporter activity (GO:0005381);; Molecular Function: manganese ion transmembrane transporter activity (GO:0005384);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular metal ion homeostasis (GO:0006875);; Biological Process: cellular iron ion homeostasis (GO:0006879);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to ethylene (GO:0009723);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: response to iron ion (GO:0010039);; Biological Process: response to aluminum ion (GO:0010044);; Molecular Function: aluminum ion transmembrane transporter activity (GO:0015083);; Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);; Molecular Function: inorganic anion transmembrane transporter activity (GO:0015103);; Biological Process: aluminum cation transport (GO:0015690);; Biological Process: lead ion transport (GO:0015692);; Biological Process: inorganic anion transport (GO:0015698);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: iron ion transmembrane transport (GO:0034755);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: system development (GO:0048731);; Biological Process: cellular localization (GO:0051641);; Biological Process: manganese ion homeostasis (GO:0055071);; Biological Process: cadmium ion transmembrane transport (GO:0070574);; Biological Process: manganese ion transmembrane transport (GO:0071421);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: positive regulation of reactive oxygen species metabolic process (GO:2000379);; ","K03322|0|brp:103872398|K03322 manganese transport protein | (RefSeq) metal transporter Nramp6","--","[P]","Inorganic ion transport and metabolism","Natural resistance-associated macrophage protein","Metal transporter Nramp6 OS=Arabidopsis thaliana OX=3702 GN=NRAMP6 PE=2 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: metal transporter Nramp6 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; cellular component: membrane part (GO:0044425);; biological process: developmental process (GO:0032502)"]
["Bra027759","Bra027759",0.630349,52,0.305994,26,0.374407,29,3.407836,196,2.501876,139,4.625042,258,{"v":1.38576624537878e-07,"d":"1.39E-07"},2.36088071361601,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","--","Probable membrane-associated kinase regulator 2 OS=Arabidopsis thaliana OX=3702 GN=MAKR2 PE=2 SV=1","S","Function unknown","PREDICTED: probable membrane-associated kinase regulator 2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896)"]
["Bra004285","Bra004285",2.317566,210,3.496133,331,3.737359,317,1.941882,112,0.535455,33,1.064266,72,0.000488595891964501,-1.95957283035102,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to absence of light (GO:0009646);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: establishment of cell polarity (GO:0030010);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of defense response to virus by host (GO:0050691);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=WRKY9 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 9 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra031152","Bra031152",22.300452,2652,25.752613,3110,29.471131,3263,4.228562,343,3.980185,303,2.289509,196,{"v":1.02263151046497e-28,"d":"1.02E-28"},-3.43358272360028,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: single-organism cellular process (GO:0044763);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","Arabidopsis phospholipase-like protein (PEARLI 4)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842568 isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020)"]
["Bra023112","Bra023112",3.295298,311,1.729655,166,2.274698,190,0.497683,39,0.119137,7,0.150858,12,{"v":8.64243143886415e-07,"d":"8.64E-07"},-3.27080934447058,"down","--","--","Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: pollen germination (GO:0009846);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: epidermal cell fate specification (GO:0009957);; Biological Process: seed coat development (GO:0010214);; Biological Process: response to organonitrogen compound (GO:0010243);; Biological Process: heat acclimation (GO:0010286);; Biological Process: cellular component organization (GO:0016043);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: cellular response to heat (GO:0034605);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: innate immune response (GO:0045087);; Biological Process: anatomical structure development (GO:0048856);; ","--","--","--","--","WRKY DNA -binding domain","WRKY transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=WRKY44 PE=1 SV=2","K","Transcription","PREDICTED: WRKY transcription factor 44 isoform X4 [Brassica rapa]","biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: immune system process (GO:0002376)"]
["Bra040829","Bra040829",4.316269,142,2.536427,84,4.548957,138,8.344773,194,15.058468,337,13.106413,295,0.00919136563270503,1.10218297053353,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: protein self-association (GO:0043621);; Biological Process: regulation of DNA methylation (GO:0044030);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; ","--","--","--","--","RNA-directed DNA methylation 1","Protein RDM1 OS=Arabidopsis thaliana OX=3702 GN=RDM1 PE=1 SV=1","S","Function unknown","PREDICTED: protein RDM1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra022981","Bra022981",112.424339,2487,227.344482,5075,298.440277,6107,75.254387,1178,26.339603,397,33.459328,508,{"v":1.61621043277257e-06,"d":"1.62E-06"},-2.67137489978211,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein binding (GO:0005515);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; ","--","--","--","--","Divergent CCT motif","Protein TIFY 5B OS=Arabidopsis thaliana OX=3702 GN=TIFY 5B PE=2 SV=1","--","--","protein TIFY 5B-like [Brassica napus]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra033176","Bra033176",12.57342,647,14.676932,762,15.955821,759,3.980541,145,8.400258,295,8.376476,296,{"v":8.52978099601199e-05,"d":"8.53E-05"},-1.57710304901402,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cell communication (GO:0007154);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to chitin (GO:0010200);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: proline transport (GO:0015824);; Cellular Component: membrane (GO:0016020);; Biological Process: membrane organization (GO:0016044);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: regulation of programmed cell death (GO:0043067);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: root hair cell differentiation (GO:0048765);; ","K04733|0|brp:103853555|K04733 interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1] | (RefSeq) probable receptor-like protein kinase At4g10390","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Probable receptor-like protein kinase At4g10390 OS=Arabidopsis thaliana OX=3702 GN=At4g10390 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein kinase At4g10390 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra017178","Bra017178",46.813576,945,48.601986,990,22.86746,427,22.966434,328,15.003837,207,14.603872,202,{"v":4.70722778280231e-05,"d":"4.71E-05"},-1.66168307895618,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nucleosome assembly (GO:0006334);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: thylakoid (GO:0009579);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11254|1.24465e-50|zma:103634846|K11254 histone H4 | (RefSeq) histone H4","--","[B]","Chromatin structure and dynamics","Centromere kinetochore component CENP-T histone fold;; TATA box binding protein associated factor (TAF)","Histone H4 OS=Glycine max OX=3847 PE=3 SV=1","B","Chromatin structure and dynamics","histone H4 [Zea mays]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054)"]
["Bra007943","Bra007943",18.670597,479,23.691769,613,23.392735,555,4.235215,77,3.287327,58,1.646806,29,{"v":2.57731702372271e-14,"d":"2.58E-14"},-3.28543556129116,"down","--","--","--","--","--","[R]","General function prediction only","--","Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At4g22758-like [Brassica rapa] ","--"]
["Bra026948","Bra026948",0.291766,23,0.09962,8,0.112944,9,2.190706,121,10.523565,557,8.880839,473,{"v":7.62738412134696e-11,"d":"7.63E-11"},4.42416503201942,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: argininosuccinate lyase activity (GO:0004056);; Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (GO:0004365);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytosol (GO:0005829);; Biological Process: glycolytic process (GO:0006096);; Biological Process: rRNA processing (GO:0006364);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Cellular Component: stromule (GO:0010319);; Cellular Component: membrane (GO:0016020);; Biological Process: reductive pentose-phosphate cycle (GO:0019253);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity (GO:0047100);; Cellular Component: apoplast (GO:0048046);; Biological Process: anther wall tapetum development (GO:0048658);; Molecular Function: NADP binding (GO:0050661);; Molecular Function: NAD binding (GO:0051287);; Biological Process: primary root development (GO:0080022);; Biological Process: amino acid homeostasis (GO:0080144);; ","K05298|0|brp:103843097|K05298 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13] | (RefSeq) GAPDH-A; glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic","Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain;; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain","Glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAPA2 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576);; biological process: reproductive process (GO:0022414)"]
["Bra021835","Bra021835",8.112508,1063,3.732479,497,4.337024,541,1.893829,192,0.216082,25,0.65085,64,0.000118199468587125,-2.67584510520731,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: membrane (GO:0016020);; ","--","--","[S]","Function unknown","Serine incorporator (Serinc);; Plant self-incompatibility protein S1","S-protein homolog 11 OS=Arabidopsis thaliana OX=3702 GN=SPH11 PE=3 SV=1","S","Function unknown","BnaA04g19250D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra038862","Bra038862",1.02088,96,3.015485,286,2.70558,235,0.12027,8,0.127057,9,0.220978,15,{"v":2.5150532996817e-10,"d":"2.52E-10"},-4.0320771435328,"down","--","--","Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: iron ion transport (GO:0006826);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to toxic substance (GO:0009636);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: lignin metabolic process (GO:0009808);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Biological Process: xenobiotic catabolic process (GO:0042178);; Cellular Component: cytoplasmic part (GO:0044444);; Molecular Function: coniferyl-alcohol glucosyltransferase activity (GO:0047209);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; ","K12356|0|brp:103872738|K12356 coniferyl-alcohol glucosyltransferase [EC:2.4.1.111] | (RefSeq) UDP-glycosyltransferase 72E1-like","Phenylpropanoid biosynthesis (ko00940)","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 72E1 OS=Arabidopsis thaliana OX=3702 GN=UGT72E1 PE=1 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 72E1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824)"]
["Bra037965","Bra037965",13.20066,321,17.688137,433,16.844561,378,8.940049,154,9.786655,162,12.731047,212,0.000589114151873702,-1.1456090454068,"down","--","--","Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871072 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)"]
["Bra026603","Bra026603",1.174863,69,4.774985,270,4.757917,248,0.870066,37,0.376288,15,0.460567,24,{"v":7.04262844935639e-05,"d":"7.04E-05"},-2.79398648026955,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","--","--","Phloem protein 2;; F-box domain","F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1","S","Function unknown","PREDICTED: F-box protein PP2-B10-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179)"]
["Bra003749","Bra003749",0.710288,46,0.547412,36,0.575491,35,2.640443,121,2.441959,108,2.117962,94,{"v":8.79666697830913e-05,"d":"8.80E-05"},1.39149496598025,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: pattern specification process (GO:0007389);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: gynoecium development (GO:0048467);; ","--","--","--","--","Domain of unknown function (DUF702)","Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1","S","Function unknown","PREDICTED: protein SHI RELATED SEQUENCE 5-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414)"]
["Bra017166","Bra017166",0.19542,15,0.278963,21,0.181367,13,2.681827,140,1.539357,77,1.200706,61,{"v":7.38926066316513e-05,"d":"7.39E-05"},2.30116888043684,"up","[Z]","Cytoskeleton","Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: cytoskeleton (GO:0005856);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to auxin (GO:0009733);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: seed germination (GO:0009845);; Biological Process: pollen tube growth (GO:0009860);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Biological Process: actin cytoskeleton organization (GO:0030036);; Biological Process: regulation of protein localization (GO:0032880);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell division (GO:0051301);; ","K10355|0|brp:103865617|K10355 actin, other eukaryote | (RefSeq) actin-1-like","--","[Z]","Cytoskeleton","Actin","Actin-3 OS=Arabidopsis thaliana OX=3702 GN=ACT3 PE=1 SV=1","Z","Cytoskeleton","PREDICTED: actin-1-like [Brassica rapa]","molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576)"]
["Bra003310","Bra003310",14.381705,428,44.397745,1323,46.050104,1266,6.988096,144,3.099725,73,6.980253,142,{"v":1.16999607687264e-07,"d":"1.17E-07"},-2.99885136695562,"down","--","--","Cellular Component: autophagosome membrane (GO:0000421);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar lumen (GO:0005775);; Cellular Component: autophagosome (GO:0005776);; Cellular Component: microtubule (GO:0005874);; Biological Process: postreplication repair (GO:0006301);; Biological Process: phosphatidylinositol biosynthetic process (GO:0006661);; Biological Process: autophagy (GO:0006914);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: cellular response to starvation (GO:0009267);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; Molecular Function: Atg8 ligase activity (GO:0019776);; Molecular Function: Atg8 activating enzyme activity (GO:0019779);; Molecular Function: Atg8-specific protease activity (GO:0019786);; Biological Process: protein localization by the Cvt pathway (GO:0032258);; Cellular Component: Cvt vesicle membrane (GO:0033110);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; ","K08341|1.19949e-81|brp:103830129|K08341 GABA(A) receptor-associated protein | (RefSeq) autophagy-related protein 8e-like","Regulation of autophagy (ko04140)","[Z]","Cytoskeleton","Autophagy protein Atg8 ubiquitin like;; Ubiquitin-like autophagy protein Apg12","Autophagy-related protein 8e OS=Arabidopsis thaliana OX=3702 GN=ATG8E PE=1 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: autophagy-related protein 8e-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179)"]
["Bra007921","Bra007921",11.425947,996,6.858177,1025,6.801808,958,1.162945,135,0.328956,38,0.803225,91,{"v":1.37552247341372e-13,"d":"1.38E-13"},-3.42180075389958,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Biological Process: ion transport (GO:0006811);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to heat (GO:0009408);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular response to extracellular stimulus (GO:0031668);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular biosynthetic process (GO:0044249);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Salt stress response/antifungal","Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: cysteine-rich receptor-like protein kinase 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra009691","Bra009691",8.839706,577,8.841978,582,6.793648,410,1.636876,76,0.893132,40,0.432315,20,{"v":8.58738787080233e-12,"d":"8.59E-12"},-3.41546245791132,"down","[I]","Lipid transport and metabolism","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: defense response (GO:0006952);; Biological Process: metabolic process (GO:0008152);; Biological Process: cell death (GO:0008219);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to organic cyclic compound (GO:0014070);; Biological Process: single-organism transport (GO:0044765);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: organic substance transport (GO:0071702);; ","--","--","[V]","Defense mechanisms","alpha/beta hydrolase fold;; Carboxylesterase family;; Steryl acetyl hydrolase","Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: probable carboxylesterase 18 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179)"]
["Bra021403","Bra021403",588.331303,65531,626.217117,70611,612.181862,63736,386.88403,30379,174.995499,13276,168.084291,12841,{"v":3.93190155583269e-06,"d":"3.93E-06"},-1.83724227514187,"down","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: extracellular region (GO:0005576);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: proline transport (GO:0015824);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Biological Process: primary metabolic process (GO:0044238);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; Biological Process: organic substance metabolic process (GO:0071704);; ","K01051|0|brp:103843688|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase/pectinesterase inhibitor 20","Pentose and glucuronate interconversions (ko00040);; Starch and sucrose metabolism (ko00500)","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana OX=3702 GN=PME20 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: probable pectinesterase/pectinesterase inhibitor 20 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Brassica_rapa_newGene_28129","--",1.929945,246,6.574554,653,6.890378,622,2.595803,163,1.475245,145,1.69544,112,0.000361156687179088,-1.8694515753982,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; ","--","--","[R]","General function prediction only","--","--","--","--","PREDICTED: uncharacterized protein LOC106323108 [Brassica oleracea var. oleracea]","molecular function: binding (GO:0005488)"]
["Bra028405","Bra028405",2.316761,157,1.002795,70,0.877472,57,6.058127,285,8.14822,377,7.126924,332,{"v":4.66192702539675e-05,"d":"4.66E-05"},1.75338460678696,"up","[I]","Lipid transport and metabolism","Molecular Function: catalytic activity (GO:0003824);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plastid (GO:0009536);; Cellular Component: membrane (GO:0016020);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","--","--","--","--","Alpha/beta hydrolase family;; alpha/beta hydrolase fold;; Serine aminopeptidase, S33","Methylesterase 1 OS=Arabidopsis thaliana OX=3702 GN=MES1 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103850110 isoform X1 [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra036865","Bra036865",0.581324,122,0.321655,75,0.381775,81,1.427118,220,1.260574,196,1.854091,282,0.000127270184969309,1.27204157954544,"up","--","--","Biological Process: Group II intron splicing (GO:0000373);; Biological Process: RNA processing (GO:0006396);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: seed development (GO:0048316);; ","--","--","[L]","Replication, recombination and repair","CRS1 / YhbY (CRM) domain","CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM3B PE=3 SV=1","S","Function unknown","PREDICTED: CRM-domain containing factor CFM3B, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra019491","Bra019491",1.433346,101,0.863664,81,1.588245,125,7.879089,371,9.126691,388,9.592891,452,{"v":8.01447321524582e-09,"d":"8.01E-09"},1.88028769060055,"up","--","--","--","--","--","--","--","Protein of unknown function (DUF3223)","Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1","S","Function unknown","protein DCL homolog, chloroplastic-like isoform X1 [Brassica napus] ","--"]
["Bra018215","Bra018215",5.399024,554,13.219869,1412,17.595135,1589,2.09694,146,1.554965,139,1.104341,89,{"v":7.44813740320157e-10,"d":"7.45E-10"},-3.19573186843844,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: response to chitin (GO:0010200);; Biological Process: amino acid import (GO:0043090);; ","--","--","--","--","Carbohydrate-binding protein of the ER","Uncharacterized protein At1g24485 OS=Arabidopsis thaliana OX=3702 GN=RWK1 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein At1g24485 isoform X1 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896)"]
["Bra017757","Bra017757",3.352545,475,5.599803,810,5.7324,736,2.656575,293,1.999963,111,1.752739,179,0.000225463222242603,-1.80599393508213,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: steroid hydroxylase activity (GO:0008395);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: monopolar cell growth (GO:0042814);; Biological Process: petal development (GO:0048441);; Biological Process: stamen development (GO:0048443);; Biological Process: oxidation-reduction process (GO:0055114);; ","K12637|0|brp:103862467|K12637 3-epi-6-deoxocathasterone 23-monooxygenase [EC:1.14.13.112] | (RefSeq) 3-epi-6-deoxocathasterone 23-monooxygenase-like","Brassinosteroid biosynthesis (ko00905)","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana OX=3702 GN=ROT3 PE=2 SV=3","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Brassica_rapa_newGene_31601","--",0.668673,62,0.34429,35,0.451286,39,2.270795,154,2.645676,166,4.197164,275,{"v":3.29153135450621e-06,"d":"3.29E-06"},2.03298503201711,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","--","--","S","Function unknown","uncharacterized protein LOC110229131 [Arabidopsis lyrata subsp. lyrata]","molecular function: binding (GO:0005488)"]
["Bra033412","Bra033412",0.131592,5,0.058827,3,0.040429,2,2.119379,52,4.181899,98,3.886378,91,{"v":9.88557291093233e-10,"d":"9.89E-10"},4.15414380539745,"up","--","--","Biological Process: rRNA processing (GO:0006364);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Biological Process: plastid organization (GO:0009657);; Biological Process: photosystem II repair (GO:0010206);; Biological Process: photosystem II assembly (GO:0010207);; Cellular Component: chloroplast photosystem II (GO:0030095);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; ","K08902|7.45565e-70|brp:103844493|K08902 photosystem II Psb27 protein | (RefSeq) photosystem II repair protein PSB27-H1, chloroplastic","Photosynthesis (ko00195)","--","--","Photosystem II Pbs27","Photosystem II repair protein PSB27-H1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSB27-1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Bra006495","Bra006495",9.04164,361,0.886421,167,6.858365,397,26.964837,715,23.893602,1106,26.144957,1151,0.000431287184944736,1.57511047077204,"up","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: nucleocytoplasmic transport (GO:0006913);; Biological Process: response to stress (GO:0006950);; Cellular Component: protein serine/threonine phosphatase complex (GO:0008287);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);; Cellular Component: nuclear speck (GO:0016607);; Cellular Component: integral component of endoplasmic reticulum membrane (GO:0030176);; Cellular Component: nuclear membrane (GO:0031965);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: tetrapyrrole binding (GO:0046906);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: negative regulation of chlorophyll biosynthetic process (GO:1902325);; ","K04460|0|brp:103856368|K04460 serine/threonine-protein phosphatase 5 [EC:3.1.3.16] | (RefSeq) uncharacterized LOC103856368","--","[R]","General function prediction only","Aluminium induced protein;; Calcineurin-like phosphoesterase;; PPP5 TPR repeat region;; Glutamine amidotransferase domain;; Glutamine amidotransferase domain","Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana OX=3702 GN=PAPP5 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: uncharacterized protein LOC103856368 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra011195","Bra011195",15.56032,330,51.377899,1097,20.907272,409,1.286665,20,0.311066,5,2.029556,30,{"v":3.77974585273476e-11,"d":"3.78E-11"},-4.64872427759255,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: cytosol (GO:0005829);; Biological Process: double-strand break repair (GO:0006302);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to gamma radiation (GO:0010332);; Biological Process: suberin biosynthetic process (GO:0010345);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","--","--","--","--","--","--","PREDICTED: counting factor 45-1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824)"]
["Bra034056","Bra034056",0.618708,43,1.229085,81,0.731263,45,3.635528,169,4.268999,191,5.870041,260,0.000171891704925538,1.7471139945019,"up","[K]","Transcription","Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid chromosome (GO:0009508);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","--","--","Transcription termination factor nusG","--","K","Transcription","PREDICTED: uncharacterized protein LOC103848245 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra011130","Bra011130",6.247243,546,7.420254,654,8.132526,657,3.426253,212,0.20388,13,0.152475,10,0.00764837126507238,-2.54603514518603,"down","[R]","General function prediction only","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: nucleotide metabolic process (GO:0009117);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","[R]","General function prediction only","Type I phosphodiesterase / nucleotide pyrophosphatase;; Sulfatase","--","S","Function unknown","PREDICTED: venom phosphodiesterase 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra037204","Bra037204",51.471241,2607,158.527662,7996,153.698563,7068,32.666642,1151,28.387799,974,27.635794,966,{"v":2.77194199547398e-07,"d":"2.77E-07"},-2.51113832884402,"down","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: glutathione transferase activity (GO:0004364);; Molecular Function: glutathione peroxidase activity (GO:0004602);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: inorganic anion transport (GO:0015698);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: glucosinolate metabolic process (GO:0019760);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: glutathione binding (GO:0043295);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: lateral root development (GO:0048527);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of flavonol biosynthetic process (GO:1900384);; Biological Process: alpha-amino acid catabolic process (GO:1901606);; ","K00799|0|brp:103837644|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase F14","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain","Glutathione S-transferase F14 OS=Arabidopsis thaliana OX=3702 GN=GSTF14 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase F14 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra001519","Bra001519",2.536994,135,1.644347,89,3.611165,167,0.208817,10,0.731134,26,0.097657,6,{"v":9.34331889408246e-06,"d":"9.34E-06"},-3.00652357508015,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: multicellular organism development (GO:0007275);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: protein ubiquitination (GO:0016567);; ","--","--","[R]","General function prediction only","Seven in absentia protein family","Probable inactive E3 ubiquitin-protein ligase SINAT6 OS=Arabidopsis thaliana OX=3702 GN=SINAT6 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra031890","Bra031890",24.101059,1483,63.977494,3971,65.757571,3742,6.56949,287,2.788851,117,2.196146,93,{"v":2.27153933688162e-12,"d":"2.27E-12"},-4.05451156396651,"down","--","--","Molecular Function: peroxidase activity (GO:0004601);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: calcium-dependent phospholipid binding (GO:0005544);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: chromatin assembly or disassembly (GO:0006333);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: cell surface (GO:0009986);; Biological Process: polysaccharide transport (GO:0015774);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: calcium ion transmembrane transport (GO:0070588);; Biological Process: potassium ion export (GO:0071435);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Annexin","Annexin D2 OS=Arabidopsis thaliana OX=3702 GN=ANN2 PE=1 SV=1","S","Function unknown","PREDICTED: annexin D2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576)"]
["Bra015070","Bra015070",1.50783,142,3.037149,280,2.643818,259,0.989823,66,0.301968,20,0.774341,52,0.00020699576970326,-2.24546501981677,"down","[G]","Carbohydrate transport and metabolism","--","K01728|0|brp:103828610|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) probable pectate lyase 10","Pentose and glucuronate interconversions (ko00040)","--","--","Pectate lyase","Probable pectate lyase 10 OS=Arabidopsis thaliana OX=3702 GN=At3g24670 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: probable pectate lyase 10 [Brassica rapa]","--"]
["Bra009968","Bra009968",0.178859,21,0.030473,4,0.160362,15,0.809667,44,1.989345,134,2.62211,158,0.000473830616826877,2.71622105363088,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: response to nitrate (GO:0010167);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: nitrate transport (GO:0015706);; Biological Process: monosaccharide transport (GO:0015749);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: glucose homeostasis (GO:0042593);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana OX=3702 GN=SFP1 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: sugar transporter ERD6-like 17 isoform X1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra025170","Bra025170",6.003061,372,3.740466,234,3.274982,188,20.301403,889,24.97134,1053,22.689371,963,{"v":4.35802618225014e-12,"d":"4.36E-12"},1.83002792061138,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein import into nucleus (GO:0006606);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: cutin biosynthetic process (GO:0010143);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: wax metabolic process (GO:0010166);; Cellular Component: membrane (GO:0016020);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: leaf development (GO:0048366);; Biological Process: nitrogen compound transport (GO:0071705);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana OX=3702 GN=ERF119 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF119 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: reproduction (GO:0000003);; cellular component: membrane (GO:0016020)"]
["Bra039673","Bra039673",0.322624,61,0.710284,134,0.523345,91,0.022871,4,0,0,0,0,{"v":3.01884195514005e-08,"d":"3.02E-08"},-5.05129739374777,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: anion transport (GO:0006820);; Molecular Function: mechanically-gated ion channel activity (GO:0008381);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to hexose (GO:0009746);; Biological Process: detection of mechanical stimulus (GO:0050982);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: response to karrikin (GO:0080167);; ","--","--","[M]","Cell wall/membrane/envelope biogenesis","Mechanosensitive ion channel","Mechanosensitive ion channel protein 4 OS=Arabidopsis thaliana OX=3702 GN=MSL4 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: mechanosensitive ion channel protein 4 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896)"]
["Bra019749","Bra019749",3.034825,491,4.331817,617,3.881445,508,3.307921,375,2.172837,201,1.953449,235,0.00436295511645395,-1.03868365715164,"down","[G]","Carbohydrate transport and metabolism","--","K01193|0|brp:103872021|K01193 beta-fructofuranosidase [EC:3.2.1.26] | (RefSeq) acid beta-fructofuranosidase 4, vacuolar-like","Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolases family 32 N-terminal domain;; Glycosyl hydrolases family 32 C terminal;; Domain of unknown function (DUF3357)","Acid beta-fructofuranosidase 4, vacuolar OS=Arabidopsis thaliana OX=3702 GN=BFRUCT4 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: acid beta-fructofuranosidase 4, vacuolar-like [Brassica rapa]","--"]
["Bra008760","Bra008760",0.903001,82,0.433412,46,0.441809,47,3.201567,211,2.959654,183,3.628552,272,{"v":4.62678181614119e-07,"d":"4.63E-07"},1.85832814371032,"up","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: iron ion binding (GO:0005506);; Biological Process: response to stress (GO:0006950);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: skotomorphogenesis (GO:0009647);; Biological Process: abscisic acid metabolic process (GO:0009687);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: positive regulation of flower development (GO:0009911);; Molecular Function: steroid 22-alpha hydroxylase activity (GO:0010012);; Biological Process: response to UV-B (GO:0010224);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Biological Process: pollen exine formation (GO:0010584);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: leaf development (GO:0048366);; Biological Process: petal development (GO:0048441);; Biological Process: anther wall tapetum cell differentiation (GO:0048657);; Biological Process: oxidation-reduction process (GO:0055114);; ","K12639|0|brp:103846487|K12639 cytochrome P450 family 724 subfamily B polypeptide 1 [EC:1.14.13.-] | (RefSeq) cytochrome P450 724B1","Brassinosteroid biosynthesis (ko00905)","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Cytochrome P450 724B1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYP724B1 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 724B1 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; molecular function: electron carrier activity (GO:0009055);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414)"]
["Bra030775","Bra030775",1.181182,142,2.01593,247,1.990865,223,6.144123,511,9.351468,741,8.474641,705,{"v":8.59786661396199e-05,"d":"8.60E-05"},1.55645931792731,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: glucose-6-phosphate dehydrogenase activity (GO:0004345);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: pentose-phosphate shunt, oxidative branch (GO:0009051);; Cellular Component: chloroplast (GO:0009507);; Biological Process: single-organism process (GO:0044699);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: NADP binding (GO:0050661);; ","K00036|0|brp:103836338|K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] | (RefSeq) glucose-6-phosphate 1-dehydrogenase 4, chloroplastic","Pentose phosphate pathway (ko00030);; Glutathione metabolism (ko00480);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","Glucose-6-phosphate dehydrogenase, C-terminal domain;; Glucose-6-phosphate dehydrogenase, NAD binding domain","Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g09420 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: glucose-6-phosphate 1-dehydrogenase 4, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra026157","Bra026157",18.763953,5597,32.863105,8803,21.383198,3913,3.426,724,7.087843,1441,8.898211,1819,{"v":3.39979825312343e-06,"d":"3.40E-06"},-2.16022026015021,"down","[V]","Defense mechanisms","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to wounding (GO:0009611);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);; Biological Process: cadmium ion transport (GO:0015691);; Biological Process: lead ion transport (GO:0015692);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: lupeol synthase activity (GO:0042299);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: negative regulation of MAP kinase activity (GO:0043407);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: cadmium ion transmembrane transport (GO:0070574);; Biological Process: cellular response to indolebutyric acid stimulus (GO:0071366);; Biological Process: abscisic acid transport (GO:0080168);; Biological Process: p-coumaryl alcohol transport (GO:1901140);; Biological Process: regulation of lignin biosynthetic process (GO:1901141);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC-2 type transporter;; ABC transporter;; Plant PDR ABC transporter associated;; ABC-transporter extracellular N-terminal;; AAA domain, putative AbiEii toxin, Type IV TA system;; ATPase family associated with various cellular activities (AAA)","ABC transporter G family member 35 OS=Arabidopsis thaliana OX=3702 GN=ABCG35 PE=2 SV=1","V","Defense mechanisms","PREDICTED: ABC transporter G family member 35 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; molecular function: transporter activity (GO:0005215);; molecular function: catalytic activity (GO:0003824)"]
["Bra005574","Bra005574",1.462507,83,1.249907,72,1.351313,71,3.732464,150,6.562593,253,3.387633,132,0.00639604205773775,1.16247507185973,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103867625 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra025561","Bra025561",0.76022,77,0.335399,28,0.74778,60,3.081389,201,3.547004,201,3.111817,176,0.000194582892552873,1.71020065957404,"up","[C]","Energy production and conversion","Molecular Function: glycerol-3-phosphate dehydrogenase [NAD+] activity (GO:0004367);; Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: glycerol-3-phosphate biosynthetic process (GO:0046167);; Biological Process: glycerol-3-phosphate catabolic process (GO:0046168);; Biological Process: glycerolipid metabolic process (GO:0046486);; Molecular Function: glycerol-3-phosphate dehydrogenase [NAD(P)+] activity (GO:0047952);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00006|0|brp:103864010|K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8] | (RefSeq) glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic","Glycerophospholipid metabolism (ko00564)","[C]","Energy production and conversion","NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus;; Bromodomain extra-terminal - transcription regulation","Glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHAPRD PE=1 SV=1","C","Energy production and conversion","PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)"]
["Bra031385","Bra031385",2.337425,157,4.998233,338,6.09078,374,0.738931,32,0,0,0,0,0.00618405055755286,-3.22906822821413,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: alternative mRNA splicing, via spliceosome (GO:0000380);; Molecular Function: transcription antitermination factor activity, RNA binding (GO:0001072);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose metabolic process (GO:0006006);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein targeting to vacuole (GO:0006623);; Molecular Function: poly(U) RNA binding (GO:0008266);; Biological Process: cell proliferation (GO:0008283);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: embryo sac development (GO:0009553);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: cold acclimation (GO:0009631);; Biological Process: response to salt stress (GO:0009651);; Biological Process: etioplast organization (GO:0009662);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: seed germination (GO:0009845);; Biological Process: negative regulation of flower development (GO:0009910);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: histone H3-K36 methylation (GO:0010452);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: base conversion or substitution editing (GO:0016553);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Biological Process: positive regulation of histone methylation (GO:0031062);; Biological Process: transcription antitermination (GO:0031564);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Molecular Function: histone methyltransferase activity (H3-K4 specific) (GO:0042800);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: RNA stabilization (GO:0043489);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: small molecule biosynthetic process (GO:0044283);; Molecular Function: carotenoid isomerase activity (GO:0046608);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: histone methyltransferase activity (H3-K36 specific) (GO:0046975);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: anther development (GO:0048653);; Biological Process: cell wall organization (GO:0071555);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; ","--","--","[R]","General function prediction only","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1","S","Function unknown","BnaA09g30710D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; cellular component: extracellular region (GO:0005576)"]
["Bra001944","Bra001944",0.4365,91,0.420388,88,0.214764,42,1.5758,231,1.693946,239,1.449821,206,{"v":4.02308669627329e-05,"d":"4.02E-05"},1.54800869306396,"up","[KL]","Transcription;; Replication, recombination and repair","Molecular Function: DNA binding (GO:0003677);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: double-strand break repair (GO:0006302);; Biological Process: DNA recombination (GO:0006310);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: cell communication (GO:0007154);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to hormone (GO:0009725);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: regulation of flower development (GO:0009909);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: histone modification (GO:0016570);; Biological Process: cell cycle process (GO:0022402);; Biological Process: histone lysine methylation (GO:0034968);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: single organism signaling (GO:0044700);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: animal organ development (GO:0048513);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: cellular response to organic substance (GO:0071310);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K10875|0|brp:103860031|K10875 DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-] | (RefSeq) SNF2 domain-containing protein CLASSY 4-like","Homologous recombination (ko03440)","[L]","Replication, recombination and repair","SNF2 family N-terminal domain;; Helicase conserved C-terminal domain;; Type III restriction enzyme, res subunit","SNF2 domain-containing protein CLASSY 4 OS=Arabidopsis thaliana OX=3702 GN=CLSY4 PE=1 SV=1","L","Replication, recombination and repair","PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra020075","Bra020075",0.878846,110,1.071349,126,0.775908,84,4.451161,367,4.488218,359,4.191396,332,{"v":1.53585502410192e-10,"d":"1.54E-10"},1.65823692806045,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; ","--","--","[A]","RNA processing and modification","WD domain, G-beta repeat","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103851313 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: macromolecular complex (GO:0032991)"]
["Bra000506","Bra000506",6.80867,541,1.29402,88,1.342313,83,0.073429,13,0,0,0.118302,15,0.000295291552460485,-3.63325674126744,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: transcription cofactor activity (GO:0003712);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Molecular Function: phosphatidylethanolamine binding (GO:0008429);; Cellular Component: plastid (GO:0009536);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: inflorescence development (GO:0010229);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: vesicle (GO:0031982);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: short-day photoperiodism, flowering (GO:0048575);; Biological Process: negative regulation of cell aging (GO:0090344);; ","--","--","[R]","General function prediction only","Phosphatidylethanolamine-binding protein","Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1","S","Function unknown","protein CENTRORADIALIS-like [Brassica napus] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: protein binding transcription factor activity (GO:0000988);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular process (GO:0009987)"]
["Brassica_rapa_newGene_23422","--",0.288192,34,0.237967,28,0.273175,30,1.601228,131,2.038389,161,2.428677,193,{"v":8.08121683614946e-10,"d":"8.08E-10"},2.29445097429121,"up","--","--","--","--","--","[R]","General function prediction only","zinc-binding in reverse transcriptase;; Reverse transcriptase-like","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103841086 isoform X1 [Brassica rapa]","--"]
["Bra027139","Bra027139",4.090101,554,6.266988,856,5.669748,710,4.114623,394,3.688815,340,3.934003,365,0.00163750012154154,-1.00484536780872,"down","[R]","General function prediction only","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: aldo-keto reductase (NADP) activity (GO:0004033);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to sucrose (GO:0009744);; Biological Process: coumarin biosynthetic process (GO:0009805);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: single-organism transport (GO:0044765);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: sucrose induced translational repression (GO:0080149);; ","--","--","[C]","Energy production and conversion","Aldo/keto reductase family","Probable aldo-keto reductase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g60730 PE=2 SV=1","C","Energy production and conversion","Aldo/keto reductase [Corchorus olitorius]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179)"]
["Bra008788","Bra008788",15.056922,890,34.195991,1941,37.174868,1843,2.571702,133,2.19333,77,1.804464,102,{"v":1.06217302348252e-17,"d":"1.06E-17"},-3.85547962924398,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: flower development (GO:0009908);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: leaf senescence (GO:0010150);; Biological Process: innate immune response (GO:0045087);; Biological Process: animal organ formation (GO:0048645);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 SV=1","--","--","PREDICTED: NAC domain-containing protein 83 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra002022","Bra002022",11.563778,1120,14.450728,1412,10.803544,968,7.982158,547,7.177197,474,6.01181,399,{"v":3.41773762650407e-07,"d":"3.42E-07"},-1.34111628393717,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: carbohydrate transport (GO:0008643);; Cellular Component: chloroplast (GO:0009507);; Biological Process: trichoblast differentiation (GO:0010054);; Molecular Function: glycerol-3-phosphate transmembrane transporter activity (GO:0015169);; Biological Process: nitrate transport (GO:0015706);; Biological Process: polyol transport (GO:0015791);; Biological Process: glycerol-3-phosphate transport (GO:0015794);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: phosphate ion homeostasis (GO:0055062);; Biological Process: transmembrane transport (GO:0055085);; ","K13783|0|brp:103845993|K13783 MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2 | (RefSeq) putative glycerol-3-phosphate transporter 5","--","[G]","Carbohydrate transport and metabolism","Major Facilitator Superfamily","Putative glycerol-3-phosphate transporter 5 OS=Arabidopsis thaliana OX=3702 GN=At2g13100 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: putative glycerol-3-phosphate transporter 5 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Bra018749","Bra018749",0.476938,62,0.578046,76,0.830367,94,0.006285,1,0,0,0,0,{"v":2.38470001576179e-11,"d":"2.38E-11"},-6.04122060868524,"down","[R]","General function prediction only","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: detection of fungus (GO:0016046);; Biological Process: benzoate metabolic process (GO:0018874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: positive regulation of plant-type hypersensitive response (GO:0034052);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: interspecies interaction between organisms (GO:0044419);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: 4-aminobenzoate amino acid synthetase activity (GO:0052625);; Molecular Function: benzoate amino acid synthetase activity (GO:0052626);; Molecular Function: vanillate amino acid synthetase activity (GO:0052627);; Molecular Function: 4-hydroxybenzoate amino acid synthetase activity (GO:0052628);; Biological Process: cellular response to hypoxia (GO:0071456);; ","K14487|0|brp:103871447|K14487 auxin responsive GH3 gene family | (RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana OX=3702 GN=GH3.12 PE=1 SV=1","--","--","PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824)"]
["Bra022787","Bra022787",15.415708,563,14.235872,524,17.526087,592,9.718606,251,7.918889,197,10.683788,268,{"v":6.67623425236666e-07,"d":"6.68E-07"},-1.27559502799255,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: defense response (GO:0006952);; Biological Process: cell communication (GO:0007154);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to organic substance (GO:0010033);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","LURP-one-related","Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=1","S","Function unknown","PREDICTED: protein LURP-one-related 7 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra013867","Bra013867",3.511833,223,1.690473,119,1.593322,117,6.121924,321,6.453214,316,8.077442,419,0.00070340095305467,1.16151200885226,"up","[R]","General function prediction only","Biological Process: defense response to insect (GO:0002213);; Molecular Function: acid phosphatase activity (GO:0003993);; Cellular Component: vacuole (GO:0005773);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: response to copper ion (GO:0046688);; ","--","--","--","--","HAD superfamily, subfamily IIIB (Acid phosphatase)","Acid phosphatase 1 OS=Solanum lycopersicum OX=4081 GN=APS1 PE=2 SV=1","S","Function unknown","PREDICTED: acid phosphatase 1 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991)"]
["Bra028714","Bra028714",5.353967,499,24.600519,2315,21.875263,1890,0,0,0,0,0,0,{"v":3.41489288224586e-30,"d":"3.41E-30"},-9.90651715945082,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: binding (GO:0005488);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: endoplasmic reticulum (GO:0005783);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: positive gravitropism (GO:0009958);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: root development (GO:0048364);; Biological Process: flavonol metabolic process (GO:0051554);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: thalianol metabolic process (GO:0080003);; Molecular Function: thalian-diol desaturase activity (GO:0080004);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","3,9-dihydroxypterocarpan 6A-monooxygenase OS=Glycine max OX=3847 GN=CYP93A1 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: beta-amyrin 24-hydroxylase [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987)"]
["Bra039871","Bra039871",0.992152,140,2.386217,341,2.36974,298,0.501182,48,0.056336,5,0.413003,47,0.000689640882559534,-2.70801592984194,"down","--","--","Biological Process: embryo sac development (GO:0009553);; Biological Process: pollen development (GO:0009555);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","Zinc finger, C3HC4 type (RING finger)","Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS34 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103833423 [Brassica rapa]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra039672","Bra039672",2.375797,216,2.219147,206,2.122599,177,6.774155,432,8.983014,550,6.837694,420,{"v":1.09845030386834e-06,"d":"1.10E-06"},1.16898060963966,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871127 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra040624","Bra040624",35.51074,7895,55.749775,12091,49.789332,10387,18.566646,2907,9.790948,1563,10.980064,1754,{"v":1.367194850103e-10,"d":"1.37E-10"},-2.31261200471141,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: MAPK cascade (GO:0000165);; Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: meiosis I (GO:0007127);; Biological Process: oligosaccharide metabolic process (GO:0009311);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: cellular water homeostasis (GO:0009992);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: lateral root development (GO:0048527);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: chromosome organization (GO:0051276);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Wall-associated receptor kinase C-terminal;; Wall-associated receptor kinase galacturonan-binding","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.4 PE=2 SV=2","T","Signal transduction mechanisms","BnaA02g12620D [Brassica napus]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra028836","Bra028836",165.155848,16519,300.371135,30580,278.814744,26042,72.041017,5019,50.455902,3372,49.789199,3389,{"v":3.461010778731e-13,"d":"3.46E-13"},-2.6566583018909,"down","--","--","Cellular Component: chromatin (GO:0000785);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin silencing (GO:0006342);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Molecular Function: phosphatidylinositol-5-phosphate binding (GO:0010314);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: metal ion transport (GO:0030001);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: response to chemical (GO:0042221);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: single-organism metabolic process (GO:0044710);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: histone H3-K4 methylation (GO:0051568);; ","--","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 6 OS=Arabidopsis thaliana OX=3702 GN=HIPP06 PE=1 SV=1","S","Function unknown","PREDICTED: heavy metal-associated isoprenylated plant protein 3 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179)"]
["Bra001732","Bra001732",4.831427,58,13.197127,158,16.235252,178,0.364781,4,0.239719,2,0,0,{"v":7.42157127032087e-10,"d":"7.42E-10"},-5.1932103365486,"down","--","--","Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; ","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103859789 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra010283","Bra010283",70.436605,7117,311.906153,37211,195.988806,21062,22.232365,1354,40.308928,1956,14.200871,988,{"v":3.76813476076271e-10,"d":"3.77E-10"},-3.76164125825793,"down","[F]","Nucleotide transport and metabolism","Cellular Component: cytosol (GO:0005829);; Biological Process: glutamine metabolic process (GO:0006541);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; Biological Process: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine (GO:0019281);; Biological Process: glucosinolate metabolic process (GO:0019760);; Molecular Function: gamma-glutamyl-peptidase activity (GO:0034722);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[F]","Nucleotide transport and metabolism","Glutamine amidotransferase class-I;; Peptidase C26;; Homoserine O-succinyltransferase","Gamma-glutamyl peptidase 1 OS=Arabidopsis thaliana OX=3702 GN=GGP1 PE=1 SV=1","F","Nucleotide transport and metabolism","PREDICTED: gamma-glutamyl peptidase 1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra019257","Bra019257",2.378327,400,3.892569,709,4.813816,718,0.687974,92,0.586163,86,0.447672,65,{"v":2.41887383303536e-12,"d":"2.42E-12"},-2.9080988997209,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978);; Cellular Component: Golgi stack (GO:0005795);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: galactose metabolic process (GO:0006012);; Biological Process: response to stress (GO:0006950);; Biological Process: signal transduction (GO:0007165);; Biological Process: pollen development (GO:0009555);; Biological Process: response to hormone (GO:0009725);; Biological Process: xyloglucan biosynthetic process (GO:0009969);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: rhamnogalacturonan I biosynthetic process (GO:0010246);; Biological Process: rhamnogalacturonan II biosynthetic process (GO:0010306);; Biological Process: arabinose biosynthetic process (GO:0019567);; Biological Process: UDP-L-arabinose biosynthetic process (GO:0033358);; Biological Process: capsule polysaccharide biosynthetic process (GO:0045227);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: UDP-arabinose 4-epimerase activity (GO:0050373);; Molecular Function: coenzyme binding (GO:0050662);; ","K01784|0|brp:103861448|K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] | (RefSeq) UDP-glucose 4-epimerase 2","Galactose metabolism (ko00052);; Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; Polysaccharide biosynthesis protein;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; RmlD substrate binding domain;; short chain dehydrogenase;; NAD(P)H-binding;; KR domain;; Male sterility protein","UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=UGE2 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-glucose 4-epimerase 2 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra000087","Bra000087",3.118594,465,4.807378,694,6.06783,793,2.460153,242,1.142465,113,2.202445,215,{"v":8.27127172047451e-05,"d":"8.27E-05"},-1.80009086343893,"down","[HJ]","Coenzyme transport and metabolism;; Translation, ribosomal structure and biogenesis","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: response to chitin (GO:0010200);; Molecular Function: indole-3-acetic acid amido synthetase activity (GO:0010279);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: detection of fungus (GO:0016046);; Biological Process: benzoate metabolic process (GO:0018874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: positive regulation of plant-type hypersensitive response (GO:0034052);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: interspecies interaction between organisms (GO:0044419);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: 4-aminobenzoate amino acid synthetase activity (GO:0052625);; Molecular Function: benzoate amino acid synthetase activity (GO:0052626);; Molecular Function: vanillate amino acid synthetase activity (GO:0052627);; Molecular Function: 4-hydroxybenzoate amino acid synthetase activity (GO:0052628);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: positive regulation of camalexin biosynthetic process (GO:1901183);; ","K14487|0|brp:103857806|K14487 auxin responsive GH3 gene family | (RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana OX=3702 GN=GH3.12 PE=1 SV=1","--","--","PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12-like isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra032544","Bra032544",11.770699,3188,30.177064,6748,24.396223,6177,11.231075,2199,7.719042,1788,8.792472,1911,0.000201726021684586,-1.50171134823509,"down","[S]","Function unknown","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: cytokinesis (GO:0000910);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA recombination (GO:0006310);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: organelle organization (GO:0006996);; Biological Process: positive regulation of cell proliferation (GO:0008284);; Biological Process: asymmetric cell division (GO:0008356);; Biological Process: epidermis development (GO:0008544);; Biological Process: response to cold (GO:0009409);; Biological Process: pollen development (GO:0009555);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Cellular Component: cortical microtubule, transverse to long axis (GO:0010005);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Cellular Component: membrane (GO:0016020);; Molecular Function: kinase activity (GO:0016301);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: regulation of meiotic nuclear division (GO:0040020);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: leaf development (GO:0048366);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of primary metabolic process (GO:0080090);; ","K20098|0|brp:103843687|K20098 DNA excision repair protein ERCC-6-like 2 [EC:3.6.4.-] | (RefSeq) switch 2","--","[KL]","Transcription;; Replication, recombination and repair","Protein kinase domain;; SNF2 family N-terminal domain;; Protein tyrosine kinase;; Helicase conserved C-terminal domain;; Type III restriction enzyme, res subunit","Switch 2 OS=Arabidopsis thaliana OX=3702 GN=SWI2 PE=3 SV=1","L","Replication, recombination and repair","BnaA09g50860D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422)"]
["Bra033436","Bra033436",224.269928,14924,398.394165,26754,363.59082,22383,71.463348,3365,57.769093,2618,59.92057,2733,{"v":1.87108420628816e-18,"d":"1.87E-18"},-2.9025131177298,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: SNAP receptor activity (GO:0005484);; Cellular Component: vacuole (GO:0005773);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: vacuolar transport (GO:0007034);; Biological Process: cell proliferation (GO:0008283);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: cell plate (GO:0009504);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: transpiration (GO:0010148);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: endomembrane system (GO:0012505);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Biological Process: sterol biosynthetic process (GO:0016126);; Cellular Component: transport vesicle (GO:0030133);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Cellular Component: SNARE complex (GO:0031201);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Molecular Function: protein anchor (GO:0043495);; Biological Process: regulation of multi-organism process (GO:0043900);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: spindle assembly (GO:0051225);; Biological Process: negative regulation of cellular defense response (GO:0051245);; Biological Process: maintenance of protein location in plasma membrane (GO:0072660);; Biological Process: protein localization to plasma membrane (GO:0072661);; ","K08486|0|brp:103863466|K08486 syntaxin 1B/2/3 | (RefSeq) syntaxin-122","SNARE interactions in vesicular transport (ko04130)","[U]","Intracellular trafficking, secretion, and vesicular transport","Syntaxin;; SNARE domain","Syntaxin-122 OS=Arabidopsis thaliana OX=3702 GN=SYP122 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: syntaxin-122 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425)"]
["Bra025053","Bra025053",1.146311,148,1.791822,233,1.351751,162,0.733621,67,0.875275,77,0.72372,64,0.000324984411450992,-1.41223453938118,"down","--",null,"Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to stress (GO:0006950);; Biological Process: signal transduction (GO:0007165);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: cell differentiation (GO:0030154);; Biological Process: regulation of defense response (GO:0031347);; Molecular Function: signaling receptor activity (GO:0038023);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: stamen development (GO:0048443);; Biological Process: developmental growth (GO:0048589);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","Protein tyrosine kinase;; Leucine rich repeat;; Protein kinase domain;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Calmodulin-binding receptor kinase CaMRLK OS=Arabidopsis thaliana OX=3702 GN=CAMRLK PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; cellular component: organelle (GO:0043226)"]
["Bra034012","Bra034012",2.904275,711,3.426624,795,2.16965,508,1.414542,270,1.201384,215,1.537571,250,{"v":6.5510878841952e-09,"d":"6.55E-09"},-1.48280014556021,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: nuclear lamina (GO:0005652);; Cellular Component: cytosol (GO:0005829);; Cellular Component: cytoskeleton (GO:0005856);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: nucleus organization (GO:0006997);; Biological Process: flower development (GO:0009908);; Biological Process: gene silencing (GO:0016458);; Biological Process: histone modification (GO:0016570);; Biological Process: cell cycle process (GO:0022402);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Cellular Component: nuclear periphery (GO:0034399);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Cellular Component: cytoplasmic part (GO:0044444);; ","--","--","--","--","--","Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana OX=3702 GN=CRWN1 PE=1 SV=1","S","Function unknown","PREDICTED: protein CROWDED NUCLEI 1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra017435","Bra017435",4.23766,326,5.141223,401,5.031335,357,15.040171,836,16.881753,892,20.046953,1065,{"v":6.08206687763525e-07,"d":"6.08E-07"},1.28847184488685,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; ","--","--","[I]","Lipid transport and metabolism","START domain","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: uncharacterized protein LOC103839466 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra017813","Bra017813",22.67938,1171,26.052998,1357,16.845724,805,9.629518,352,2.437826,86,2.952435,105,{"v":1.43931998411744e-05,"d":"1.44E-05"},-2.51497727307579,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to chitin (GO:0010200);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);; ","K09422|0|brp:103862529|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB44-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor MYB44-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra003997","Bra003997",4.952259,528,2.900991,525,3.888731,534,16.252872,1282,10.635668,1084,13.229087,1398,{"v":2.48379314102197e-08,"d":"2.48E-08"},1.17851344861459,"up","[K]","Transcription","Molecular Function: binding (GO:0005488);; Cellular Component: intracellular (GO:0005622);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: tissue development (GO:0009888);; Biological Process: response to ozone (GO:0010193);; Biological Process: cellular component organization (GO:0016043);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: animal organ development (GO:0048513);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain;; Leucine Rich Repeat;; ATPase family associated with various cellular activities (AAA)","Disease resistance protein TAO1 OS=Arabidopsis thaliana OX=3702 GN=TAO1 PE=4 SV=1","S","Function unknown","PREDICTED: disease resistance protein TAO1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra025003","Bra025003",28.537174,1946,23.976752,1552,30.023728,1782,23.671609,1042,9.898197,494,7.085448,396,0.000581726103117366,-1.46438114101352,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","PLATZ transcription factor","--","--","--","PREDICTED: uncharacterized protein LOC103827715 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra014776","Bra014776",4.645357,1159,9.622861,2421,9.486349,2188,1.302945,230,0.204446,35,0.19121,33,{"v":1.21349090670194e-07,"d":"1.21E-07"},-3.92472188327103,"down","[V]","Defense mechanisms","Cellular Component: vacuolar lumen (GO:0005775);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: amino acid transport (GO:0006865);; Biological Process: vacuolar transport (GO:0007034);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to organic substance (GO:0010033);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: antibiotic transport (GO:0042891);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: innate immune response (GO:0045087);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC-2 type transporter;; ABC transporter;; AAA ATPase domain;; RsgA GTPase;; AAA domain, putative AbiEii toxin, Type IV TA system;; P-loop containing region of AAA domain;; NACHT domain;; AAA domain;; 50S ribosome-binding GTPase;; AAA domain;; ArgK protein;; Thymidylate kinase;; RNA helicase","ABC transporter G family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCG16 PE=2 SV=2","V","Defense mechanisms","PREDICTED: ABC transporter G family member 16 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: immune system process (GO:0002376)"]
["Bra006834","Bra006834",3.98481,764,4.897112,949,3.478858,618,0.094244,14,0,0,0,0,0.00228074348121744,-3.75620920216433,"down","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Cellular Component: lytic vacuole (GO:0000323);; Molecular Function: protein binding (GO:0005515);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: asymmetric cell division (GO:0008356);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to blue light (GO:0009637);; Biological Process: photomorphogenesis (GO:0009640);; Molecular Function: auxin:proton symporter activity (GO:0009672);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to glucose (GO:0009749);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: determination of bilateral symmetry (GO:0009855);; Cellular Component: auxin efflux carrier complex (GO:0009921);; Cellular Component: basal plasma membrane (GO:0009925);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: positive gravitropism (GO:0009958);; Cellular Component: cell surface (GO:0009986);; Biological Process: meristem initiation (GO:0010014);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of root meristem growth (GO:0010082);; Biological Process: xylem development (GO:0010089);; Biological Process: response to far red light (GO:0010218);; Biological Process: inflorescence development (GO:0010229);; Biological Process: auxin homeostasis (GO:0010252);; Biological Process: auxin efflux (GO:0010315);; Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);; Biological Process: leaf formation (GO:0010338);; Biological Process: leaf shaping (GO:0010358);; Cellular Component: vesicle membrane (GO:0012506);; Biological Process: proton transport (GO:0015992);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Cellular Component: lateral plasma membrane (GO:0016328);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Cellular Component: apical part of cell (GO:0045177);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: stamen development (GO:0048443);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: root hair initiation (GO:0048766);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cotyledon morphogenesis (GO:0048826);; Biological Process: adventitious root development (GO:0048830);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: cell wall organization (GO:0071555);; Molecular Function: auxin transmembrane transporter activity (GO:0080161);; ","K13947|0|brp:103856772|K13947 auxin efflux carrier family | (RefSeq) auxin efflux carrier component 2-like","--","--","--","Membrane transport protein","Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: auxin efflux carrier component 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: growth (GO:0040007);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414);; cellular component: organelle part (GO:0044422)"]
["Bra022772","Bra022772",242.219315,17670,363.039581,26725,327.435486,22096,105.913383,5466,58.129486,2888,55.467075,2773,{"v":5.5232442109536e-12,"d":"5.52E-12"},-2.5907617385979,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: response to osmotic stress (GO:0006970);; Cellular Component: protein serine/threonine phosphatase complex (GO:0008287);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: stomatal lineage progression (GO:0010440);; Biological Process: cellular component organization (GO:0016043);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: interspecies interaction between organisms (GO:0044419);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Protein phosphatase 2C","Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana OX=3702 GN=At2g30020 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 25 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: macromolecular complex (GO:0032991);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra028683","Bra028683",4.427788,393,4.030676,374,3.685884,297,3.49334,218,2.016834,150,2.081046,151,0.000108333417936619,-1.06911409594811,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: N,N-dimethylaniline monooxygenase activity (GO:0004499);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: phosphatidylinositol biosynthetic process (GO:0006661);; Biological Process: ion transport (GO:0006811);; Biological Process: signal transduction (GO:0007165);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to hormone (GO:0009725);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process from homomethionine (GO:0033506);; Biological Process: response to lipid (GO:0033993);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: innate immune response (GO:0045087);; Biological Process: shoot system development (GO:0048367);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Molecular Function: NADP binding (GO:0050661);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: 3-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080102);; Molecular Function: 4-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080103);; Molecular Function: 5-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080104);; Molecular Function: 6-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080105);; Molecular Function: 7-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080106);; Molecular Function: 8-methylthiopropyl glucosinolate S-oxygenase activity (GO:0080107);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Flavin-binding monooxygenase-like;; Pyridine nucleotide-disulphide oxidoreductase;; Pyridine nucleotide-disulphide oxidoreductase;; NAD(P)-binding Rossmann-like domain;; FAD dependent oxidoreductase;; L-lysine 6-monooxygenase (NADPH-requiring);; HI0933-like protein;; Pyridine nucleotide-disulphide oxidoreductase;; FAD binding domain;; FAD binding domain","Flavin-containing monooxygenase FMO GS-OX-like 9 OS=Arabidopsis thaliana OX=3702 GN=At5g07800 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 9 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra009884","Bra009884",0.485331,189,0.763893,300,0.649049,233,2.140847,588,1.875398,496,2.587515,688,0.000522741463513841,1.20067490485698,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","N-terminal C2 in EEIG1 and EHBP1 proteins","Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=PMIR2 PE=2 SV=1","S","Function unknown","PREDICTED: protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028288","Bra028288",12.283155,1102,11.531467,1118,11.727878,848,31.519459,2321,36.384334,2901,22.59495,2154,{"v":1.97734623661451e-08,"d":"1.98E-08"},1.21101084779126,"up","[ER]","Amino acid transport and metabolism;; General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: L-iditol 2-dehydrogenase activity (GO:0003939);; Cellular Component: cytosol (GO:0005829);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: ion transport (GO:0006811);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: plasmodesma (GO:0009506);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: L-idonate catabolic process (GO:0046183);; Biological Process: response to stimulus (GO:0050896);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","K00008|0|brp:103832662|K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] | (RefSeq) sorbitol dehydrogenase","Pentose and glucuronate interconversions (ko00040);; Fructose and mannose metabolism (ko00051)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Alcohol dehydrogenase GroES-like domain;; Zinc-binding dehydrogenase;; Glucose dehydrogenase C-terminus","Sorbitol dehydrogenase OS=Arabidopsis thaliana OX=3702 GN=SDH PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: sorbitol dehydrogenase [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896)"]
["Bra036266","Bra036266",1.837862,147,0.560022,45,0.504022,38,4.848129,273,6.73745,365,7.212188,394,0.000179025930806066,2.07707949972072,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: regulation of circadian rhythm (GO:0042752);; Biological Process: leaf development (GO:0048366);; Biological Process: photoperiodism, flowering (GO:0048573);; ","--","--","--","--","--","Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2","S","Function unknown","PREDICTED: phytochrome A-associated F-box protein isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra018370","Bra018370",0.274729,59,0.308956,33,0.089549,18,1.601853,137,3.379732,288,2.559028,200,{"v":1.19658075770539e-05,"d":"1.20E-05"},2.38117432191291,"up","[G]","Carbohydrate transport and metabolism","--","--","--","[G]","Carbohydrate transport and metabolism","Major Facilitator Superfamily","Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ANTR1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Brassica rapa] ","--"]
["Bra015869","Bra015869",3.112853,179,1.09778,65,1.892362,104,8.753101,315,11.5744,499,12.532717,486,{"v":4.36325272847714e-05,"d":"4.36E-05"},1.82356650615415,"up","--","--","--","--","--","--","--","Sin3 binding region of histone deacetylase complex subunit SAP30","--","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103831967 [Brassica rapa]","--"]
["Bra039700","Bra039700",47.093361,1161,73.440102,1827,80.176926,1828,11.529745,201,8.423687,142,6.912597,117,{"v":1.98638186523297e-19,"d":"1.99E-19"},-3.38595077483545,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","zinc-finger of the FCS-type, C2-C2","Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103871102 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra034030","Bra034030",29.838283,2725,77.103468,6996,71.295667,6040,33.66235,2137,16.40391,995,15.292577,970,0.000223341097751326,-1.9494140409775,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: mannose-6-phosphate isomerase activity (GO:0004476);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: GDP-mannose biosynthetic process (GO:0009298);; Biological Process: response to absence of light (GO:0009646);; Biological Process: response to sucrose (GO:0009744);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: L-ascorbic acid biosynthetic process (GO:0019853);; Biological Process: response to cobalt ion (GO:0032025);; Biological Process: response to L-ascorbic acid (GO:0033591);; Biological Process: response to DDT (GO:0046680);; Biological Process: response to cadmium ion (GO:0046686);; ","K01809|0|brp:103852367|K01809 mannose-6-phosphate isomerase [EC:5.3.1.8] | (RefSeq) PMI2; mannose-6-phosphate isomerase 2","Fructose and mannose metabolism (ko00051);; Amino sugar and nucleotide sugar metabolism (ko00520)","[G]","Carbohydrate transport and metabolism","Phosphomannose isomerase type I;; Cupin domain","Mannose-6-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=PMI2 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: mannose-6-phosphate isomerase 2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra011897","Bra011897",6.343775,976,12.434104,1967,12.110536,1774,6.688689,703,3.697614,341,4.491477,454,0.00026134845848764,-1.68690822024398,"down","--",null,"Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: defense response to oomycetes (GO:0002229);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: early endosome (GO:0005769);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: disaccharide metabolic process (GO:0005984);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: DNA replication (GO:0006260);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: actin filament organization (GO:0007015);; Biological Process: cell death (GO:0008219);; Biological Process: oligosaccharide biosynthetic process (GO:0009312);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: embryo sac cellularization (GO:0009558);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: microsporocyte differentiation (GO:0010480);; Biological Process: regulation of hormone levels (GO:0010817);; Molecular Function: beta-amylase activity (GO:0016161);; Biological Process: histone modification (GO:0016570);; Molecular Function: amino acid binding (GO:0016597);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: cellular carbohydrate biosynthetic process (GO:0034637);; Biological Process: response to topologically incorrect protein (GO:0035966);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: innate immune response (GO:0045087);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: pollen tube development (GO:0048868);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: protein complex subunit organization (GO:0071822);; Biological Process: regulation of defense response to fungus (GO:1900150);; Biological Process: regulation of defense response to bacterium (GO:1900424);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);; Biological Process: regulation of stem cell division (GO:2000035);; Biological Process: regulation of post-embryonic root development (GO:2000069);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; ACT domain","Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase STY46-like isoform X3 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: immune system process (GO:0002376)"]
["Bra016936","Bra016936",226.909668,4667,215.595093,4475,169.113892,3218,78.910454,1149,62.480186,876,58.774288,829,{"v":1.06533251175639e-23,"d":"1.07E-23"},-2.13956825378188,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: cellular component organization (GO:0016043);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: root hair elongation (GO:0048767);; Biological Process: pollen tube development (GO:0048868);; Biological Process: regulation of nitric oxide metabolic process (GO:0080164);; ","K13448|1.7175e-68|brp:103865883|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML35","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF hand;; EF-hand domain;; EF-hand domain pair;; EF-hand domain pair","Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 PE=2 SV=2","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML35 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra012168","Bra012168",10.392164,592,16.359225,884,13.293406,550,8.777059,295,4.589496,186,6.98913,215,{"v":7.49825430384535e-06,"d":"7.50E-06"},-1.57041451763693,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103829498 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra031563","Bra031563",10.53318,480,3.982338,269,4.206886,223,33.057251,958,31.421503,1258,44.561775,1076,{"v":2.8178071879935e-08,"d":"2.82E-08"},1.71989315761482,"up","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: nucleolin 1-like [Brassica rapa]","--"]
["Bra022786","Bra022786",39.136781,3040,81.178819,6416,95.634373,6924,35.582488,2009,16.736004,909,11.360874,785,{"v":5.33707654784594e-05,"d":"5.34E-05"},-2.14353371801285,"down","--","--","Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: immune effector process (GO:0002252);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to 1-aminocyclopropane-1-carboxylic acid (GO:0009961);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: reproductive process (GO:0022414);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; Biological Process: cellular heat acclimation (GO:0070370);; ","K13423|0|brp:103857301|K13423 WRKY transcription factor 25 | (RefSeq) probable WRKY transcription factor 25","Plant-pathogen interaction (ko04626)","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=WRKY25 PE=1 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 25 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra023126","Bra023126",293.018341,30073,488.148712,50557,450.018127,42726,391.967255,28460,145.562698,10174,133.068817,9359,0.00932204007376328,-1.38388459096938,"down","[C]","Energy production and conversion","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762);; Molecular Function: electron carrier activity (GO:0009055);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Biological Process: response to stimulus (GO:0050896);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","FAD binding domain;; Berberine and berberine like","Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana OX=3702 GN=At1g30730 PE=2 SV=1","C","Energy production and conversion","PREDICTED: reticuline oxidase-like protein [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: electron carrier activity (GO:0009055);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra018301","Bra018301",165.386581,8279,152.038071,7680,144.205948,6678,103.142151,3653,84.082321,2867,90.555931,3106,{"v":3.75576524697888e-17,"d":"3.76E-17"},-1.27700952125758,"down","--","--","--","K11275|1.34715e-33|brp:103867940|K11275 histone H1/5 | (RefSeq) histone H1.2-like","--","--","--","linker histone H1 and H5 family","Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1","S","Function unknown","PREDICTED: histone H1.2-like [Brassica rapa]","--"]
["Bra005336","Bra005336",2.923706,503,3.041678,515,3.107807,482,1.00945,125,1.398412,166,2.278356,270,0.000236034597542163,-1.43429440410078,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to superoxide (GO:0000303);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein glycosylation (GO:0006486);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: nitric oxide biosynthetic process (GO:0006809);; Biological Process: water transport (GO:0006833);; Biological Process: membrane fusion (GO:0006944);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: embryo development (GO:0009790);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: lateral root morphogenesis (GO:0010102);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of reactive oxygen species metabolic process (GO:2000377);; ","--","--","--","--","RCD1-SRO-TAF4 (RST) plant domain","Probable inactive poly [ADP-ribose] polymerase SRO1 OS=Arabidopsis thaliana OX=3702 GN=SRO1 PE=1 SV=2","S","Function unknown","BnaA05g08530D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501)"]
["Brassica_rapa_newGene_959","--",0,0,0,0,0,0,2.095965,63,4.893806,140,2.259767,66,{"v":4.30565068492113e-11,"d":"4.31E-11"},6.5149111651201,"up","--","--","Cellular Component: extracellular region (GO:0005576);; ","K20729|1.41279e-15|brp:103831696|K20729 protein EPIDERMAL PATTERNING FACTOR 1/2 | (RefSeq) EPIDERMAL PATTERNING FACTOR-like protein 7","--","--","--","Epidermal patterning factor proteins","EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 7 [Brassica rapa] ","cellular component: extracellular region (GO:0005576)"]
["Bra030899","Bra030899",0.533182,47,0.655143,44,1.004769,64,3.692247,185,3.2452,199,3.09365,187,{"v":1.241995722022e-06,"d":"1.24E-06"},1.77175540608747,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Biological Process: response to UV (GO:0009411);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: pollen development (GO:0009555);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: somatic embryogenesis (GO:0010262);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Cellular Component: CCAAT-binding factor complex (GO:0016602);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; ","K08064|2.54039e-150|brp:103832630|K08064 nuclear transcription factor Y, alpha | (RefSeq) nuclear transcription factor Y subunit A-5-like","--","[K]","Transcription","CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B","Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1","K","Transcription","PREDICTED: nuclear transcription factor Y subunit A-5-like isoform X1 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra012673","Bra012673",22.473423,650,41.751759,1218,49.040268,1312,11.917795,244,20.267771,399,13.583571,270,{"v":5.15414944199738e-05,"d":"5.15E-05"},-1.82643180930446,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","Pollen proteins Ole e I like","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103860901 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000466","Bra000466",5.176346,488,1.519937,183,1.993834,191,7.79808,577,14.000083,992,10.581851,879,0.00145637269426088,1.46128776034306,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: phytochrome binding (GO:0010313);; Biological Process: negative regulation of translation (GO:0017148);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: mRNA 5'-UTR binding (GO:0048027);; ","--","--","[R]","General function prediction only","Zinc finger C-x8-C-x5-C-x3-H type (and similar);; RNA-binding, Nab2-type zinc finger","Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana OX=3702 GN=At2g47850 PE=2 SV=2","S","Function unknown","PREDICTED: zinc finger CCCH domain-containing protein 32-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra040642","Bra040642",69.318909,5205,125.863548,9537,102.07486,7090,37.078979,1970,39.878757,2040,33.740559,1736,{"v":2.70841746285906e-09,"d":"2.71E-09"},-1.96483431169403,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chitin (GO:0010200);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: ligase activity (GO:0016874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: cellular response to nitrogen levels (GO:0043562);; Biological Process: single-organism process (GO:0044699);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K10664|0|brp:103848994|K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ATL6-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger;; Anaphase-promoting complex subunit 11 RING-H2 finger","E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra013790","Bra013790",39.357319,1688,123.611572,5349,113.307007,4495,9.879923,300,13.632974,399,10.384617,306,{"v":3.67533650927691e-12,"d":"3.68E-12"},-3.45964809869304,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Protein of unknown function (DUF679)","Protein DMP3 OS=Arabidopsis thaliana OX=3702 GN=DMP3 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103861987 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra039120","Bra039120",63.812294,7936,190.75238,23939,188.074173,21637,36.869484,3244,61.174141,5181,61.736591,5261,0.000141016548030484,-1.97363749752046,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Biological Process: fatty acid alpha-oxidation (GO:0001561);; Biological Process: long-chain fatty acid metabolic process (GO:0001676);; Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Biological Process: iron ion transport (GO:0006826);; Biological Process: cell death (GO:0008219);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: cell wall modification involved in abscission (GO:0009830);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: linoleate 13S-lipoxygenase activity (GO:0016165);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Molecular Function: heme binding (GO:0020037);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: cellular response to salicylic acid stimulus (GO:0071446);; Biological Process: cellular response to nitric oxide (GO:0071732);; ","K10529|0|brp:103870978|K10529 alpha-dioxygenase [EC:1.-.-.-] | (RefSeq) alpha-dioxygenase 1","alpha-Linolenic acid metabolism (ko00592)","[R]","General function prediction only","Animal haem peroxidase","Alpha-dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=DOX1 PE=1 SV=1","S","Function unknown","PREDICTED: alpha-dioxygenase 1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: extracellular region (GO:0005576);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra041012","Bra041012",40.259576,5316,79.21343,10562,74.07788,9038,31.994782,2986,25.058734,2255,23.664088,2142,{"v":2.54958936004762e-06,"d":"2.55E-06"},-1.7979928732509,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to cold (GO:0009409);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: ion binding (GO:0043167);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: leaf development (GO:0048366);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana OX=3702 GN=PLL4 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 23 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra037471","Bra037471",43.720969,2427,43.389877,2459,43.50565,2245,32.670103,1258,33.398974,1230,26.105791,983,{"v":9.06634076563494e-09,"d":"9.07E-09"},-1.0873319107786,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to chitin (GO:0010200);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; zinc-RING finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger","Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 OS=Arabidopsis thaliana OX=3702 GN=At5g05130 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin-protein ligase DTX3 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra007993","Bra007993",4.642635,487,2.933423,308,2.8648,266,9.118513,687,11.954614,869,12.355341,899,{"v":2.06620672023277e-05,"d":"2.07E-05"},1.17439543606986,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Molecular Function: magnesium ion transmembrane transporter activity (GO:0015095);; Biological Process: magnesium ion transport (GO:0015693);; ","--","--","[S]","Function unknown","Magnesium transporter NIPA","Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g71900 PE=2 SV=1","S","Function unknown","PREDICTED: probable magnesium transporter NIPA4 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215)"]
["Bra031269","Bra031269",1.901715,71,2.065693,78,1.801804,63,9.016149,238,7.521117,191,10.898516,279,{"v":2.05189988503451e-07,"d":"2.05E-07"},1.65793144303652,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: guard cell differentiation (GO:0010052);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to chitin (GO:0010200);; Biological Process: cysteine biosynthetic process (GO:0019344);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: root development (GO:0048364);; Biological Process: regulation of cell wall pectin metabolic process (GO:1902066);; ","--","--","--","--","Dof domain, zinc finger","Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2","K","Transcription","PREDICTED: dof zinc finger protein DOF3.1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152)"]
["Bra029990","Bra029990",81.581696,4670,48.058968,2776,33.691021,1784,21.878685,886,8.946642,349,5.79129,228,{"v":4.7038077310382e-06,"d":"4.70E-06"},-2.52853454738809,"down","--","--","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: transcription coactivator activity (GO:0003713);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: pollen tube guidance (GO:0010183);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of synergid differentiation (GO:0045697);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);; ","K09422|0|brp:103827837|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB44-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor MYB44-like [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: protein binding transcription factor activity (GO:0000988);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: locomotion (GO:0040011);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra030611","Bra030611",4.659746,1000,2.58353,596,2.541631,524,8.55939,1354,8.285349,1270,11.295927,1712,0.000436174008974762,1.00048500308733,"up","--","--","Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: exonuclease activity (GO:0004527);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: auxin metabolic process (GO:0009850);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: procambium histogenesis (GO:0010067);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);; Biological Process: dephosphorylation (GO:0016311);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: inositol trisphosphate metabolic process (GO:0032957);; Molecular Function: phosphatidylinositol bisphosphate phosphatase activity (GO:0034593);; Molecular Function: phosphatidylinositol phosphate 5-phosphatase activity (GO:0034595);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: inositol trisphosphate phosphatase activity (GO:0046030);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: inositol phosphate dephosphorylation (GO:0046855);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Biological Process: inositol phosphate-mediated signaling (GO:0048016);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","--","Type IV inositol polyphosphate 5-phosphatase 6 OS=Arabidopsis thaliana OX=3702 GN=IP5P6 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: type IV inositol polyphosphate 5-phosphatase 6 isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: signaling (GO:0023052)"]
["Bra011868","Bra011868",2.722312,142,1.679936,95,1.813062,98,8.84789,366,8.232855,344,9.576344,382,{"v":1.60336072353389e-12,"d":"1.60E-12"},1.65215288913894,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103836677 isoform X2 [Brassica rapa] ","--"]
["Bra000364","Bra000364",553.467834,21046,938.868835,36027,795.976562,28000,227.728409,6127,391.769684,10146,337.894012,8805,{"v":6.76342682549552e-07,"d":"6.76E-07"},-1.79327384234795,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellular component organization (GO:0016043);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","--","Plastocyanin-like domain","Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=1 SV=1","S","Function unknown","PREDICTED: uclacyanin-2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Brassica_rapa_newGene_17766","--",1.108168,160,2.485686,342,2.116361,286,0.120397,12,0.123766,10,0.014337,2,{"v":6.21943350438181e-13,"d":"6.22E-13"},-4.70505338043095,"down","--","--","--","K07466|0|bna:106434110|K07466 replication factor A1 | (RefSeq) uncharacterized LOC106434110","DNA replication (ko03030);; Nucleotide excision repair (ko03420);; Mismatch repair (ko03430);; Homologous recombination (ko03440)","[D]","Cell cycle control, cell division, chromosome partitioning","Replication factor-A C terminal domain","--","L","Replication, recombination and repair","BnaAnng22330D [Brassica napus]","--"]
["Bra031638","Bra031638",2.270098,111,3.860957,184,3.76311,164,0.103177,4,0,0,0,0,{"v":2.99645181631812e-13,"d":"3.00E-13"},-5.89174682266876,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: iron ion transport (GO:0006826);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; ","K12471|3.59547e-145|brp:103843386|K12471 epsin | (RefSeq) clathrin interactor 1","--","[F]","Nucleotide transport and metabolism","ENTH domain","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: clathrin interactor 1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra025807","Bra025807",10.981481,546,38.231041,1917,33.480133,1539,0,0,2.149899,73,0.538229,19,0.00478638337900716,-3.40124531849217,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","--","Uncharacterized protein At1g76070 OS=Arabidopsis thaliana OX=3702 GN=At1g76070 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At1g76070 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra034716","Bra034716",1.535131,98,1.249314,82,0.839429,52,6.159659,290,5.315801,247,6.080488,256,{"v":1.07686788102006e-08,"d":"1.08E-08"},1.7151582064228,"up","[J]","Translation, ribosomal structure and biogenesis","Cellular Component: mitochondrion (GO:0005739);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast (GO:0009507);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: protein targeting to chloroplast (GO:0045036);; ","--","--","--","--","Ribosomal silencing factor during starvation","Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1","S","Function unknown","PREDICTED: protein Iojap, chloroplastic-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179)"]
["Bra023998","Bra023998",220.615722,15138,298.179212,20781,281.555792,17832,133.172112,6434,91.674998,4361,85.701363,3998,{"v":2.8080693585354e-10,"d":"2.81E-10"},-1.90333390677302,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: iron ion transport (GO:0006826);; Biological Process: amino acid transport (GO:0006865);; Biological Process: nitric oxide mediated signal transduction (GO:0007263);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: nitrate transport (GO:0015706);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","WRKY DNA -binding domain;; Plant zinc cluster domain","Probable WRKY transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=WRKY11 PE=2 SV=2","K","Transcription","PREDICTED: probable WRKY transcription factor 11 isoform X1 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra022675","Bra022675",1.09634,52,0.42313,21,1.060674,47,4.952228,165,8.975582,287,6.359212,205,{"v":3.53348865959498e-06,"d":"3.53E-06"},2.30772418884444,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","VQ motif","VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1","S","Function unknown","PREDICTED: VQ motif-containing protein 33 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra026005","Bra026005",17.472805,1961,48.82226,5440,54.676804,5712,4.774267,412,3.607505,279,2.215146,194,{"v":5.35602092938287e-13,"d":"5.36E-13"},-3.79939514397902,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: binding (GO:0005488);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: isoprenoid metabolic process (GO:0006720);; Molecular Function: steroid hydroxylase activity (GO:0008395);; Biological Process: lipid biosynthetic process (GO:0008610);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Cellular Component: membrane (GO:0016020);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: developmental process (GO:0032502);; Biological Process: hormone biosynthetic process (GO:0042446);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism process (GO:0044699);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: brassinosteroid binding (GO:0090411);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; ","K15638|0|brp:103872492|K15638 cytochrome P450 family 72 subfamily C polypeptide 1 | (RefSeq) cytochrome P450 72C1","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Cytochrome P450 72C1 OS=Arabidopsis thaliana OX=3702 GN=CYP72C1 PE=2 SV=2","Q","Secondary metabolites biosynthesis, transport and catabolism","BnaAnng25600D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422)"]
["Bra020059","Bra020059",0.822868,133,0.684231,112,0.943774,141,2.211697,252,6.21423,635,7.855612,563,0.000105406987961729,1.78961695461005,"up","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Biological Process: response to UV (GO:0009411);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cell wall modification (GO:0042545);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; Cellular Component: pollen tube (GO:0090406);; ","K01051|0|brp:103851295|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase 53","Pentose and glucuronate interconversions (ko00040);; Starch and sucrose metabolism (ko00500)","--","--","Pectinesterase;; Transferrin receptor-like dimerisation domain","Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1","G","Carbohydrate transport and metabolism","BnaA02g04440D [Brassica napus]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra026725","Bra026725",5.265055,145,0.950143,25,0.474916,11,6.905034,141,33.610868,599,40.21159,738,0.00253543833883886,2.66473242549021,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein import into nucleus (GO:0006606);; Molecular Function: ATP-dependent helicase activity (GO:0008026);; Biological Process: megagametogenesis (GO:0009561);; Biological Process: post-embryonic development (GO:0009791);; Cellular Component: pollen tube (GO:0090406);; ","K14778|6.46798e-11|bna:106415293|K14778 ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 36","--","[A]","RNA processing and modification","--","DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1","--","--","PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Brassica oleracea var. oleracea]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra034103","Bra034103",279.889736,18346,240.238164,15977,239.252069,14216,182.730693,8369,160.180716,7179,147.067401,6650,{"v":1.90135321555005e-16,"d":"1.90E-16"},-1.17006813768931,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Biological Process: heat acclimation (GO:0010286);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: Golgi localization (GO:0051645);; Biological Process: mitochondrion localization (GO:0051646);; Biological Process: peroxisome localization (GO:0060151);; ","K13448|7.32767e-119|bna:106381204|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML49","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain;; EF-hand domain pair;; EF hand","Probable calcium-binding protein CML49 OS=Arabidopsis thaliana OX=3702 GN=CML49 PE=2 SV=1","S","Function unknown","BnaA01g31850D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra009775","Bra009775",5.014408,243,10.221616,499,10.436172,467,0.739394,26,3.600984,119,2.299059,77,0.000312049799678768,-2.34224075905859,"down","[S]","Function unknown","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","Protein of unknown function, DUF599","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103874325 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra013667","Bra013667",2.941977,321,3.079364,339,3.615945,365,3.175993,245,2.036885,152,1.723889,129,0.00854327062547382,-1.00785351528824,"down","[E]","Amino acid transport and metabolism","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: catalytic activity (GO:0003824);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: defense response (GO:0006952);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[H]","Coenzyme transport and metabolism","--","--","E","Amino acid transport and metabolism","PREDICTED: uncharacterized protein LOC103860679 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra004637","Bra004637",8.62314,492,11.143327,642,10.844684,573,2.242519,91,1.386246,54,1.572577,62,{"v":4.49150023928353e-19,"d":"4.49E-19"},-3.04925600072467,"down","--","--","Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: chloroplast organization (GO:0009658);; Cellular Component: cortical endoplasmic reticulum (GO:0032541);; ","--","--","--","--","Protein of unknown function, DUF617","Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana OX=3702 GN=MIZ1 PE=1 SV=1","S","Function unknown","PREDICTED: protein MIZU-KUSSEI 1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra026787","Bra026787",1.056822,107,2.268745,230,3.196604,297,0.81234,58,0.704805,49,1.123245,78,0.00224359988301959,-1.77702917977241,"down","[E]","Amino acid transport and metabolism","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Biological Process: proteolysis (GO:0006508);; Biological Process: single-organism cellular process (GO:0044763);; ","K09645|0|brp:103843176|K09645 vitellogenic carboxypeptidase-like protein [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 50","--","[OE]","Posttranslational modification, protein turnover, chaperones;; Amino acid transport and metabolism","Serine carboxypeptidase","Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana OX=3702 GN=SCPL50 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: serine carboxypeptidase-like 50 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Brassica_rapa_newGene_26235","--",162.350388,9943,105.506424,6521,105.750168,5992,78.807549,3415,25.459389,1062,24.877565,1044,0.000138570424994452,-1.96840848931255,"down","--","--","Molecular Function: copper ion binding (GO:0005507);; Cellular Component: vacuole (GO:0005773);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","--","Plastocyanin-like domain","Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=1 SV=1","S","Function unknown","PREDICTED: lamin-like protein [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra024493","Bra024493",2.124645,195,1.378387,151,0.980963,101,4.645405,347,4.224023,320,3.669515,314,0.000104758423792124,1.09274671454363,"up","--","--","--","--","--","--","--","--","F-box/LRR-repeat protein At3g58940 OS=Arabidopsis thaliana OX=3702 GN=At3g58940 PE=2 SV=1","S","Function unknown","PREDICTED: F-box/LRR-repeat protein At3g58930-like isoform X4 [Brassica rapa]","--"]
["Bra037747","Bra037747",2.762523,169,4.9876,308,5.432767,308,0.046885,3,0.388705,17,0,0,{"v":1.36472706546398e-06,"d":"1.36E-06"},-4.4271912460129,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endosome (GO:0005768);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: iron ion transport (GO:0006826);; Biological Process: receptor-mediated endocytosis (GO:0006898);; Biological Process: vacuole organization (GO:0007033);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: response to wounding (GO:0009611);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to UV-B (GO:0010224);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: nitrate transport (GO:0015706);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: ion binding (GO:0043167);; Molecular Function: flavonol synthase activity (GO:0045431);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: response to karrikin (GO:0080167);; ","K05278|0|bna:106364152|K05278 flavonol synthase [EC:1.14.11.23] | (RefSeq) flavonol synthase/flavanone 3-hydroxylase-like","Flavonoid biosynthesis (ko00941)","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana OX=3702 GN=FLS1 PE=1 SV=1","S","Function unknown","flavonol synthase/flavanone 3-hydroxylase-like [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra000562","Bra000562",1.920022,78,2.028747,83,3.980538,149,0,0,0,0,0,0,{"v":1.90899844600882e-12,"d":"1.91E-12"},-6.82428802052501,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: pectinesterase inhibitor activity (GO:0046910);; Biological Process: response to stimulus (GO:0050896);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; ","--","--","--","--","Plant invertase/pectin methylesterase inhibitor","21 kDa protein OS=Daucus carota OX=4039 PE=2 SV=1","S","Function unknown","PREDICTED: 21 kDa protein-like [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; molecular function: enzyme regulator activity (GO:0030234);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra002475","Bra002475",11.645181,753,15.188845,991,13.796646,825,0.221754,11,0.004147,1,0,0,{"v":7.8344576636125e-21,"d":"7.83E-21"},-6.9120008889186,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; ","--","--","--","--","Root cap","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103845468 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra022795","Bra022795",0.397251,13,0.18975,13,0.255657,16,1.674247,57,5.861698,189,9.336026,320,{"v":2.34140311157395e-06,"d":"2.34E-06"},3.3495801880649,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: plastid (GO:0009536);; Biological Process: guard cell differentiation (GO:0010052);; Biological Process: negative regulation of stomatal complex development (GO:2000122);; ","--","--","--","--","Epidermal patterning factor proteins","EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1","S","Function unknown","PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra032882","Bra032882",52.485592,2862,101.603516,5590,99.818474,5035,37.907013,1462,39.758652,1477,39.988251,1494,{"v":8.15138640106226e-06,"d":"8.15E-06"},-1.65367489723415,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: intracellular signal transduction (GO:0035556);; ","--","--","--","--","Domain of unknown function (DUF4228)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103838980 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra008033","Bra008033",227.129072,14706,214.617889,13764,213.51277,12921,105.583876,4808,78.107532,3607,85.424313,4070,{"v":1.2505338425826e-26,"d":"1.25E-26"},-1.7734144898312,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: innate immune response (GO:0045087);; Biological Process: anatomical structure development (GO:0048856);; ","K13464|0|brp:103852783|K13464 jasmonate ZIM domain-containing protein | (RefSeq) protein TIFY 11B-like","Plant hormone signal transduction (ko04075)","--","--","tify domain;; Divergent CCT motif","Protein TIFY 11B OS=Arabidopsis thaliana OX=3702 GN=TIFY11B PE=1 SV=1","K","Transcription","PREDICTED: protein TIFY 11B-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376)"]
["Bra016422","Bra016422",8.419604,623,4.430449,333,6.001866,410,24.517474,1264,29.555496,1480,28.565093,1454,{"v":1.71055140249628e-09,"d":"1.71E-09"},1.57312523015099,"up","[K]","Transcription","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: cell communication (GO:0007154);; Biological Process: heat acclimation (GO:0010286);; Biological Process: lateral root formation (GO:0010311);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; Biological Process: growth (GO:0040007);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of cell division (GO:0051781);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: negative regulation of lateral root development (GO:1901332);; ","K03875|0|brp:103835748|K03875 F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2) | (RefSeq) F-box protein SKP2A","Ubiquitin mediated proteolysis (ko04120)","[R]","General function prediction only","Leucine Rich repeat;; Leucine Rich repeats (2 copies);; F-box domain;; F-box-like;; Leucine Rich Repeat","F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1","S","Function unknown","PREDICTED: F-box protein SKP2A [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007)"]
["Bra025696","Bra025696",32.971825,5011,42.846297,6442,38.029942,5230,24.912103,2495,15.471294,1566,14.733537,1467,{"v":1.06893722984022e-07,"d":"1.07E-07"},-1.63369527294771,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: calcium-dependent protein kinase C activity (GO:0004698);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of pollen tube growth (GO:0080092);; Biological Process: regulation of inward rectifier potassium channel activity (GO:1901979);; ","K13412|0|brp:103872695|K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 10-like","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; EF hand;; Protein tyrosine kinase;; EF-hand domain pair;; EF-hand domain;; EF-hand domain pair;; EF hand;; Cytoskeletal-regulatory complex EF hand;; Lipopolysaccharide kinase (Kdo/WaaP) family","Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: calcium-dependent protein kinase 10-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704)"]
["Bra015915","Bra015915",81.99617,7270,69.477531,6217,52.490688,4306,43.54707,2732,30.082815,1817,27.495533,1671,{"v":3.78518872384507e-08,"d":"3.79E-08"},-1.53077542070048,"down","--","--","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: protein binding (GO:0005515);; Cellular Component: endosome (GO:0005768);; Cellular Component: trans-Golgi network (GO:0005802);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: xyloglucan metabolic process (GO:0010411);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Molecular Function: xyloglucan 6-xylosyltransferase activity (GO:0033843);; Biological Process: root hair elongation (GO:0048767);; ","K08238|0|brp:103831911|K08238 xyloglucan 6-xylosyltransferase [EC:2.4.2.39] | (RefSeq) probable xyloglucan 6-xylosyltransferase 5","--","[GM]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis","galactosyl transferase GMA12/MNN10 family","Probable xyloglucan 6-xylosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=XXT5 PE=1 SV=1","S","Function unknown","PREDICTED: probable xyloglucan 6-xylosyltransferase 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Brassica_rapa_newGene_27569","--",1.000507,165,0.618673,104,0.697118,108,2.221289,233,3.728141,416,3.482251,338,0.000315530628973491,1.32991980312508,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: nucleic acid binding (GO:0003676);; ","--","--","[IU]","Lipid transport and metabolism;; Intracellular trafficking, secretion, and vesicular transport","--","Phospholipase SGR2 OS=Arabidopsis thaliana OX=3702 GN=SGR2 PE=1 SV=1","S","Function unknown","BnaCnng17770D [Brassica napus]","molecular function: binding (GO:0005488)"]
["Bra004835","Bra004835",95.618595,9488,32.572624,3294,32.271986,3020,40.400058,2896,23.405306,1523,23.392679,1552,0.00763285651481323,-1.336787581215,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: glucan exo-1,3-beta-glucosidase activity (GO:0004338);; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Molecular Function: beta-galactosidase activity (GO:0004565);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: alkaloid biosynthetic process (GO:0009821);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: regulation of anion channel activity (GO:0010359);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: carbohydrate catabolic process (GO:0016052);; Molecular Function: beta-D-fucosidase activity (GO:0033907);; Molecular Function: cation binding (GO:0043169);; Molecular Function: beta-L-arabinosidase activity (GO:0047701);; Cellular Component: apoplast (GO:0048046);; Molecular Function: strictosidine beta-glucosidase activity (GO:0050422);; Molecular Function: beta-gentiobiose beta-glucosidase activity (GO:0080083);; ","K01188|0|brp:103866799|K01188 beta-glucosidase [EC:3.2.1.21] | (RefSeq) beta-glucosidase 15-like","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Beta-glucosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGLU15 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-glucosidase 15-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra030868","Bra030868",156.212219,1789,120.850822,1396,133.67865,1416,31.006142,252,12.282389,96,11.354644,90,{"v":9.70992666513159e-14,"d":"9.71E-14"},-3.32162530200618,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: cysteine biosynthetic process (GO:0019344);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: root hair elongation (GO:0048767);; ","--","--","--","--","--","Arabinogalactan protein 21 OS=Arabidopsis thaliana OX=3702 GN=AGP21 PE=1 SV=1","--","--","transmembrane protein [Arabidopsis thaliana] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra021325","Bra021325",15.650672,597,13.440162,513,14.983824,526,47.723758,1280,44.156398,1137,40.64609,1061,{"v":3.96787500912207e-10,"d":"3.97E-10"},1.03232724640407,"up","--","--","Cellular Component: nucleolus (GO:0005730);; Biological Process: response to heat (GO:0009408);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to hydrogen peroxide (GO:0042542);; ","--","--","--","--","Hsp20/alpha crystallin family","Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 GN=ACD22.3 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: alpha-crystallin domain-containing protein 22.3, partial [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra000341","Bra000341",2.316121,177,0.901373,85,1.17235,93,4.577103,279,8.32324,428,5.071666,319,0.000143098673693614,1.4785440694453,"up","--","--","Biological Process: RNA methylation (GO:0001510);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; ","K02937|2.64842e-115|bna:106438209|K02937 large subunit ribosomal protein L7e | (RefSeq) 60S ribosomal protein L7-3-like","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal L30 N-terminal domain","60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L7-3-like [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; cellular component: macromolecular complex (GO:0032991)"]
["Bra009519","Bra009519",5.624055,559,4.716832,472,5.753136,540,1.628534,117,0.630488,46,1.069104,75,{"v":1.96083247138926e-11,"d":"1.96E-11"},-2.70290287358957,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: tissue development (GO:0009888);; Biological Process: cell differentiation (GO:0030154);; ","--","--","--","--","Domain of unknown function (DUF4378)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103847370 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra030259","Bra030259",152.162735,5403,138.728409,4971,120.873741,3970,100.894867,2535,52.83289,1278,58.050999,1413,{"v":5.36819595379357e-06,"d":"5.37E-06"},-1.47786056596792,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to wounding (GO:0009611);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; ","--","--","--","--","PLAT/LH2 domain;; Embryo-specific protein 3, (ATS3)","PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1","S","Function unknown","PREDICTED: PLAT domain-containing protein 2 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra019102","Bra019102",5.038293,312,13.89326,912,12.089017,720,1.119125,55,0.435634,25,0.146142,9,{"v":1.66917275570344e-09,"d":"1.67E-09"},-4.14821705685456,"down","--","--","--","K13448|1.02122e-133|brp:103861633|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML21","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region","Probable calcium-binding protein CML21 OS=Arabidopsis thaliana OX=3702 GN=CML21 PE=2 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML21 [Brassica rapa]","--"]
["Bra020628","Bra020628",22.930835,1918,20.400905,1779,28.619568,2212,14.377125,848,7.661694,455,6.836688,427,{"v":6.93659929038799e-07,"d":"6.94E-07"},-1.80147123506781,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to cold (GO:0009409);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: pollen germination (GO:0009846);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 48 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502)"]
["Bra031567","Bra031567",0.197741,22,0.041448,5,0,0,3.009445,216,8.370708,559,8.524585,568,{"v":3.47803494169864e-08,"d":"3.48E-08"},4.81158882870566,"up","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: maltose metabolic process (GO:0000023);; Cellular Component: chloroplast (GO:0009507);; Biological Process: starch biosynthetic process (GO:0019252);; ","--","--","--","--","Tetratricopeptide repeat;; Tetratricopeptide repeat","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103843466 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra011487","Bra011487",42.376584,10688,30.037629,7476,34.164946,7794,28.727939,5009,24.191065,4077,21.767238,3702,{"v":5.99349056381263e-08,"d":"5.99E-08"},-1.05448325144663,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: isoprenoid biosynthetic process (GO:0008299);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: wax biosynthetic process (GO:0010025);; Biological Process: cutin biosynthetic process (GO:0010143);; Biological Process: suberin biosynthetic process (GO:0010345);; Biological Process: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (GO:1900490);; ","K10661|0|brp:103842338|K10661 E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin ligase SUD1","Protein processing in endoplasmic reticulum (ko04141)","[A]","RNA processing and modification","RING-variant domain","Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Brassica_rapa_newGene_9996","--",11.570505,1376,9.872706,1120,12.652681,1340,5.179784,438,5.284946,411,6.25097,499,{"v":9.87218337630737e-14,"d":"9.87E-14"},-1.55145882779582,"down","--","--","Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: response to auxin (GO:0009733);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: lyase activity (GO:0016829);; ","--","--","--","--","--","--","--","--","BnaC09g42400D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)"]
["Bra026569","Bra026569",1.715491,109,1.329531,80,1.583954,104,19.96562,1412,55.397738,3783,49.596574,3409,{"v":1.76537821852202e-27,"d":"1.77E-27"},4.66509404369372,"up","--","--","Molecular Function: structural constituent of cell wall (GO:0005199);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: syncytium formation (GO:0006949);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Biological Process: plant-type cell wall modification involved in multidimensional cell growth (GO:0009831);; Biological Process: xylem development (GO:0010089);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of stomatal movement (GO:0010119);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: expansin-A15 [Brassica rapa]","molecular function: structural molecule activity (GO:0005198);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152)"]
["Brassica_rapa_newGene_22154","--",0.690522,70,1.531923,156,1.285441,120,0.371092,7,0.239487,17,0.52872,37,0.00186554063848216,-2.32786145824072,"down","--","--","--","--","--","[R]","General function prediction only","--","Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1","L","Replication, recombination and repair","PREDICTED: uncharacterized protein LOC103844987 [Brassica rapa]","--"]
["Bra031693","Bra031693",120.260292,22725,105.028038,20028,107.425415,18779,60.129147,8039,54.128235,6966,50.740807,6571,{"v":2.50955934889378e-32,"d":"2.51E-32"},-1.55575916485298,"down","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: organelle organization (GO:0006996);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: epidermis development (GO:0008544);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: seed germination (GO:0009845);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: endosperm development (GO:0009960);; Biological Process: meristem initiation (GO:0010014);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: lateral root morphogenesis (GO:0010102);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: microsporocyte differentiation (GO:0010480);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cell growth (GO:0016049);; Molecular Function: beta-amylase activity (GO:0016161);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: cell cycle process (GO:0022402);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: protein self-association (GO:0043621);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: single-organism transport (GO:0044765);; Biological Process: pectin catabolic process (GO:0045490);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: gametophyte development (GO:0048229);; Biological Process: leaf development (GO:0048366);; Biological Process: stamen development (GO:0048443);; Biological Process: embryonic meristem development (GO:0048508);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Cellular Component: micropyle (GO:0070825);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cell wall organization (GO:0071555);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: regulation of seed maturation (GO:2000034);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana OX=3702 GN=IKU2 PE=1 SV=1","S","Function unknown","PREDICTED: receptor-like protein kinase HAIKU2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; cellular component: organelle part (GO:0044422);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007)"]
["Bra023648","Bra023648",3.664015,582,10.241891,1765,12.538326,1912,1.12578,136,0.87767,103,1.05428,124,{"v":5.88025815150088e-11,"d":"5.88E-11"},-3.4785010555137,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to ozone (GO:0010193);; Cellular Component: membrane (GO:0016020);; Molecular Function: ADP binding (GO:0043531);; Biological Process: single-organism cellular process (GO:0044763);; ","--","--","--","--","TIR domain;; C1 domain;; NB-ARC domain;; TIR domain","Probable disease resistance protein RPP1 OS=Arabidopsis thaliana OX=3702 GN=RPP1 PE=2 SV=1","--","--","PREDICTED: probable disease resistance protein RPP1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699)"]
["Bra014140","Bra014140",2.981648,370,1.633132,205,1.536127,177,1.083431,96,0.735255,63,0.646249,55,{"v":1.80033289308771e-05,"d":"1.80E-05"},-1.77717730648243,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: polysaccharide catabolic process (GO:0000272);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: structural constituent of ribosome (GO:0003735);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: translation (GO:0006412);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: response to fungus (GO:0009620);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: cell wall modification (GO:0042545);; Biological Process: amino acid import (GO:0043090);; Cellular Component: apical part of cell (GO:0045177);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: root hair elongation (GO:0048767);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: positive regulation of secondary growth (GO:2000605);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeats (2 copies)","Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable inactive receptor kinase At1g48480 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: structural molecule activity (GO:0005198);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra002719","Bra002719",264.11167,21409,199.353645,16156,252.864293,19131,60.448944,3133,11.772068,499,19.715744,887,{"v":1.74491009250215e-08,"d":"1.74E-08"},-3.45776797164547,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: xylem development (GO:0010089);; Biological Process: response to chitin (GO:0010200);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Molecular Function: xyloglucan-specific endo-beta-1,4-glucanase activity (GO:0033946);; Biological Process: cell wall modification (GO:0042545);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: primary root development (GO:0080022);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0080039);; ","K14504|0|brp:103845192|K14504 xyloglucan:xyloglucosyl transferase TCH4 [EC:2.4.1.207] | (RefSeq) xyloglucan endotransglucosylase/hydrolase protein 22-like","Plant hormone signal transduction (ko04075)","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=3702 GN=XTH22 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra024537","Bra024537",4.693146,328,2.691976,189,2.498169,162,8.222787,410,10.004221,482,11.790973,571,0.0012213566389208,1.07314333776453,"up","--","--","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: methionine biosynthetic process (GO:0009086);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103840828 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699)"]
["Brassica_rapa_newGene_5529","--",7.675829,261,20.235559,694,15.633548,492,4.478644,108,2.169819,51,1.29091,31,{"v":4.6263274744511e-06,"d":"4.63E-06"},-2.82224774821909,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra023972","Bra023972",10.461477,1256,8.615579,1073,11.65541,1164,25.198099,2189,33.502529,2789,37.406048,3169,{"v":6.06997649632221e-07,"d":"6.07E-07"},1.1608073995822,"up","[T]","Signal transduction mechanisms","Molecular Function: phosphorelay response regulator activity (GO:0000156);; Biological Process: phosphorelay signal transduction system (GO:0000160);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: regulation of root meristem growth (GO:0010082);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: leaf senescence (GO:0010150);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Biological Process: regulation of anthocyanin metabolic process (GO:0031537);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: regulation of shoot system development (GO:0048831);; Biological Process: primary root development (GO:0080022);; Biological Process: regulation of seed growth (GO:0080113);; ","K14491|0|bna:106420511|K14491 two-component response regulator ARR-B family | (RefSeq) two-component response regulator ARR10-like","Plant hormone signal transduction (ko04075)","[K]","Transcription","Response regulator receiver domain;; Myb-like DNA-binding domain","Two-component response regulator ARR10 OS=Arabidopsis thaliana OX=3702 GN=ARR10 PE=1 SV=1","T","Signal transduction mechanisms","BnaA03g51830D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra003418","Bra003418",9.241558,234,7.745841,198,4.810819,113,2.177452,39,4.244268,73,3.567522,62,0.000366149838824936,-1.60989088458966,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC106298939 isoform X2 [Brassica oleracea var. oleracea] ","--"]
["Bra040906","Bra040906",5.464132,446,14.39653,1002,16.263031,1338,4.48997,267,0.431742,25,1.914484,113,0.00103504999779962,-2.58238672117747,"down","[V]","Defense mechanisms","Molecular Function: endoribonuclease activity (GO:0004521);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: deaminase activity (GO:0019239);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: response to cadmium ion (GO:0046686);; ","--","--","[J]","Translation, ribosomal structure and biogenesis","Endoribonuclease L-PSP","Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896)"]
["Brassica_rapa_newGene_26052","--",8.339429,1134,11.687306,1585,12.061782,1517,5.92449,553,4.126299,383,4.556806,425,{"v":7.00061598473727e-08,"d":"7.00E-08"},-1.68656205699554,"down","[O]","Posttranslational modification, protein turnover, chaperones","Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; Molecular Function: dipeptidase activity (GO:0016805);; ","K01301|0|brp:103846201|K01301 N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21] | (RefSeq) probable glutamate carboxypeptidase 2","--","[OPR]","Posttranslational modification, protein turnover, chaperones;; Inorganic ion transport and metabolism;; General function prediction only","Transferrin receptor-like dimerisation domain;; Peptidase family M28;; PA domain","Probable glutamate carboxypeptidase LAMP1 OS=Arabidopsis thaliana OX=3702 GN=LAMP1 PE=2 SV=1","S","Function unknown","PREDICTED: probable glutamate carboxypeptidase 2, partial [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra010967","Bra010967",3.570086,293,0.811401,68,0.86688,66,0.309342,18,0.321835,18,0,0,0.00714298656153462,-2.77847108018959,"down","[K]","Transcription","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: binding (GO:0005488);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: transferase activity (GO:0016740);; Biological Process: cell cycle process (GO:0022402);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: protein complex (GO:0043234);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ development (GO:0048513);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[R]","General function prediction only","WD domain, G-beta repeat;; PQQ-like domain","Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1","S","Function unknown","PREDICTED: myosin heavy chain kinase B-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422)"]
["Bra007738","Bra007738",49.61949,3990,51.627199,4634,64.408024,4815,34.965316,1985,33.049818,1821,35.539475,1976,{"v":1.75397535036952e-08,"d":"1.75E-08"},-1.27472852442856,"down","[T]","Signal transduction mechanisms","Biological Process: regulation of response to biotic stimulus (GO:0002831);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA replication (GO:0006260);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: embryo development (GO:0009790);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: gene silencing (GO:0016458);; Biological Process: covalent chromatin modification (GO:0016569);; Biological Process: cell cycle process (GO:0022402);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: regulation of multi-organism process (GO:0043900);; Cellular Component: membrane part (GO:0044425);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: seed development (GO:0048316);; Biological Process: cell development (GO:0048468);; Biological Process: regulation of meristem development (GO:0048509);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: phyllome development (GO:0048827);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cell division (GO:0051301);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cell wall organization or biogenesis (GO:0071554);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2","T","Signal transduction mechanisms","BnaA09g55660D [Brassica napus]","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; cellular component: organelle part (GO:0044422);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra001905","Bra001905",79.597443,1607,67.328445,1371,55.68301,1040,42.185757,603,26.329,362,20.006956,277,{"v":1.69031776386731e-06,"d":"1.69E-06"},-1.69726525644498,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At4g14450, chloroplastic [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra023092","Bra023092",1.368605,248,0.591265,108,0.864252,139,5.724691,720,5.46594,671,4.539598,562,{"v":1.77084196559943e-08,"d":"1.77E-08"},1.92111526496897,"up","--","--","Biological Process: telomere maintenance (GO:0000723);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: chromosome (GO:0005694);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to lipid (GO:0033993);; Molecular Function: telomeric DNA binding (GO:0042162);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Telomere-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TBP1 PE=1 SV=2","S","Function unknown","uncharacterized protein LOC106441055 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra021242","Bra021242",25.781035,1870,34.077748,2481,38.738236,2591,12.551979,642,10.061618,499,7.336942,384,{"v":1.47426056940525e-11,"d":"1.47E-11"},-2.22276064112416,"down","[NW]","Cell motility;; Extracellular structures","Biological Process: activation of MAPKK activity (GO:0000186);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nematode (GO:0009624);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cuticle development (GO:0042335);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: anther development (GO:0048653);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K13436|0|brp:103839298|K13436 pto-interacting protein 1 [EC:2.7.11.1] | (RefSeq) pto-interacting protein 1-like","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: pto-interacting protein 1-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra018989","Bra018989",16.561175,1011,65.079134,3987,77.70195,4380,0,0,0,0,0,0,{"v":1.97638749388809e-37,"d":"1.98E-37"},-10.75945207949,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Molecular Function: gibberellin 3-beta-dioxygenase activity (GO:0016707);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 OS=Arabidopsis thaliana OX=3702 GN=AOP1.2 PE=2 SV=1","S","Function unknown","PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP3 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra009147","Bra009147",0.693241,57,2.602739,198,2.349476,182,0.246995,18,0.252663,18,0.13802,10,{"v":7.68905672200526e-06,"d":"7.69E-06"},-3.06919335349431,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: nucleus (GO:0005634);; Biological Process: DNA repair (GO:0006281);; Biological Process: DNA recombination (GO:0006310);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: cytokinin metabolic process (GO:0009690);; Biological Process: response to arsenic-containing substance (GO:0046685);; Molecular Function: cytokinin 7-beta-glucosyltransferase activity (GO:0047807);; Biological Process: seed development (GO:0048316);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: cytokinin 9-beta-glucosyltransferase activity (GO:0080062);; Biological Process: regulation of anthocyanin catabolic process (GO:1900000);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 76C4 OS=Arabidopsis thaliana OX=3702 GN=UGT76C4 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 76C5-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra007051","Bra007051",308.657512,20317,433.180305,29090,468.469185,29045,221.183929,10420,192.251868,8690,198.158724,9085,{"v":9.83130641329184e-08,"d":"9.83E-08"},-1.53388824813316,"down","[H]","Coenzyme transport and metabolism","Cellular Component: cytosol (GO:0005829);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: methylation (GO:0032259);; Biological Process: intracellular signal transduction (GO:0035556);; ","--","--","[R]","General function prediction only","Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103841333 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra022847","Bra022847",117.69783,2763,253.866104,6014,296.22998,6433,76.267639,1267,45.222153,723,53.163761,856,{"v":1.34895991942394e-07,"d":"1.35E-07"},-2.42882641289158,"down","--","--","Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to chitin (GO:0010200);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103857380 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra017121","Bra017121",165.961294,11410,227.765221,15826,247.650159,15739,98.612585,4784,28.476695,1335,30.087381,1412,{"v":7.6174382580964e-06,"d":"7.62E-06"},-2.46282977558353,"down","--","--","--","K00430|0|brp:103865666|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase C3","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase C3 OS=Armoracia rusticana OX=3704 GN=PRXC3 PE=3 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase C3 [Brassica rapa]","--"]
["Bra037475","Bra037475",2.117744,141,2.523904,170,1.816125,113,12.901103,606,14.419599,651,17.495402,796,{"v":1.01397632232994e-15,"d":"1.01E-15"},2.19772013504612,"up","--","--","Biological Process: maltose metabolic process (GO:0000023);; Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: positive regulation of catalytic activity (GO:0043085);; ","--","--","--","--","Protein of unknown function (DUF760)","UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g17800 PE=2 SV=1","S","Function unknown","PREDICTED: UV-B-induced protein At3g17800, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra032907","Bra032907",6.252231,599,4.626257,441,4.180707,356,12.422208,828,16.496774,1051,17.784106,1148,{"v":2.38830134253246e-05,"d":"2.39E-05"},1.07776583941233,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103838953 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra038579","Bra038579",103.143177,16655,197.604124,32254,210.394794,31199,51.270964,5824,39.098277,4361,36.141487,3986,{"v":6.93622398586645e-11,"d":"6.94E-11"},-2.52429923506879,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to chitin (GO:0010200);; Biological Process: membrane organization (GO:0016044);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: regulation of programmed cell death (GO:0043067);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: recognition of pollen (GO:0048544);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; S-locus glycoprotein domain;; D-mannose binding lectin;; PAN-like domain","G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana OX=3702 GN=At1g61360 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra040152","Bra040152",13.311161,942,40.777442,2892,43.720323,2844,14.060143,707,9.964984,477,14.227607,686,0.000513644081841332,-1.85350628916971,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: flower development (GO:0009908);; Biological Process: leaf senescence (GO:0010150);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: innate immune response (GO:0045087);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: negative regulation of biological process (GO:0048519);; ","--","--","--","--","No apical meristem (NAM) protein","NAC transcription factor 47 OS=Arabidopsis thaliana OX=3702 GN=NAC047 PE=2 SV=1","K","Transcription","PREDICTED: NAC domain-containing protein 67-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376)"]
["Bra016281","Bra016281",0.300847,48,0.889756,117,0.391855,52,4.080739,412,2.999203,279,2.852822,299,{"v":5.17321342705368e-05,"d":"5.17E-05"},2.02739536660529,"up","--","--","--","--","--","--","--","Plant protein of unknown function (DUF863)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103835604 [Brassica rapa] ","--"]
["Bra035271","Bra035271",19.891148,1807,17.228909,1579,17.019493,1430,10.656048,685,11.334179,701,12.64988,788,{"v":2.9420654469129e-16,"d":"2.94E-16"},-1.18753068129762,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: autophagy (GO:0006914);; Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Biological Process: flavonoid metabolic process (GO:0009812);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: single-organism metabolic process (GO:0044710);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 91C1 OS=Arabidopsis thaliana OX=3702 GN=UGT91C1 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 91C1-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699)"]
["Bra039397","Bra039397",99.784897,1220,182.818481,2255,202.616074,2291,63.262051,548,16.961601,142,21.130281,177,{"v":8.33766558633043e-06,"d":"8.34E-06"},-2.65762993571472,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: cysteine biosynthetic process (GO:0019344);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: root hair elongation (GO:0048767);; ","--","--","--","--","--","Arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=AGP12 PE=1 SV=1","S","Function unknown","PREDICTED: arabinogalactan peptide 12-like [Raphanus sativus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra036337","Bra036337",13.570758,727,15.800422,820,19.539397,930,7.926611,274,3.348479,121,2.811416,103,{"v":6.83914986063139e-07,"d":"6.84E-07"},-2.30407011686349,"down","[I]","Lipid transport and metabolism","Molecular Function: triglyceride lipase activity (GO:0004806);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; ","--","--","[I]","Lipid transport and metabolism","Lipase (class 3)","Phospholipase A1-Igamma2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g30550 PE=1 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103854371 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020)"]
["Bra002211","Bra002211",1.400154,114,2.605675,213,2.134212,160,0.046129,3,0,0,0,0,{"v":4.40884744304839e-15,"d":"4.41E-15"},-6.28124864796416,"down","--","--","Biological Process: defense response (GO:0006952);; Biological Process: response to biotic stimulus (GO:0009607);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: multi-organism process (GO:0051704);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor C-terminal;; Xylanase inhibitor N-terminal","Basic 7S globulin 2 OS=Glycine max OX=3847 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: basic 7S globulin 2-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Brassica_rapa_newGene_15428","--",0.517602,97,0.628917,146,0.550474,85,3.031021,275,3.132992,314,3.298989,446,{"v":9.905807037078e-05,"d":"9.91E-05"},1.56091786262715,"up","[K]","Transcription","--","--","--","[R]","General function prediction only","Reverse transcriptase (RNA-dependent DNA polymerase);; Domain of unknown function (DUF4283);; Leucine rich repeat;; Leucine Rich repeats (2 copies)","Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana OX=3702 GN=RFK1 PE=2 SV=3","S","Function unknown","PREDICTED: uncharacterized protein LOC108808278 [Raphanus sativus]","--"]
["Bra020471","Bra020471",4.927701,278,5.797199,330,6.032358,314,26.052,1037,25.1971,966,23.860577,920,{"v":3.69323284305014e-12,"d":"3.69E-12"},1.5853852147683,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to glucose stimulus (GO:0071333);; Biological Process: positive regulation of seed maturation (GO:2000693);; ","--","--","--","--","bZIP transcription factor;; Basic region leucine zipper;; Basic leucine-zipper C terminal;; bZIP Maf transcription factor","Basic leucine zipper 9 OS=Arabidopsis thaliana OX=3702 GN=BZIP9 PE=1 SV=1","K","Transcription","PREDICTED: basic leucine zipper 9-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra000812","Bra000812",3.708014,191,5.323569,325,6.808672,381,0.625419,26,0.281011,10,0.135788,6,{"v":4.67891656164336e-11,"d":"4.68E-11"},-4.17582742958739,"down","--","--","Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","--","Heavy metal-associated isoprenylated plant protein 47 OS=Arabidopsis thaliana OX=3702 GN=HIPP47 PE=3 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103858683 [Brassica rapa] ","molecular function: binding (GO:0005488)"]
["Bra008592","Bra008592",37.560684,2765,50.914433,3782,60.733706,4122,23.227306,1210,17.43807,874,16.832806,849,{"v":3.21972072477963e-09,"d":"3.22E-09"},-1.91076676237326,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: cell morphogenesis (GO:0000902);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: SNAP receptor activity (GO:0005484);; Cellular Component: nucleus (GO:0005634);; Cellular Component: late endosome (GO:0005770);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: Golgi to vacuole transport (GO:0006896);; Biological Process: membrane fusion (GO:0006944);; Biological Process: Golgi organization (GO:0007030);; Biological Process: vacuole organization (GO:0007033);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: cell plate (GO:0009504);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: amyloplast organization (GO:0009660);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: negative gravitropism (GO:0009959);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: transpiration (GO:0010148);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cell growth (GO:0016049);; Cellular Component: trans-Golgi network transport vesicle (GO:0030140);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Molecular Function: protein anchor (GO:0043495);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: late endosome to vacuole transport (GO:0045324);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: negative regulation of cellular defense response (GO:0051245);; Biological Process: callose deposition in cell wall (GO:0052543);; Biological Process: maintenance of protein location in plasma membrane (GO:0072660);; Biological Process: protein localization to plasma membrane (GO:0072661);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Syntaxin-like protein;; SNARE domain","Syntaxin-21 OS=Arabidopsis thaliana OX=3702 GN=SYP21 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: syntaxin-21 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007)"]
["Bra015053","Bra015053",99.322916,13045,100.67892,13404,104.841039,12794,52.74447,4965,34.961129,3179,35.315222,3302,{"v":2.39728620768564e-13,"d":"2.40E-13"},-1.81910280594326,"down","[T]","Signal transduction mechanisms","--","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: proline-rich receptor-like protein kinase PERK1 [Brassica rapa] ","--"]
["Bra014929","Bra014929",24.051077,1488,41.712886,2608,44.863871,2558,21.931828,995,12.426541,564,16.259961,711,{"v":8.72538818693876e-05,"d":"8.73E-05"},-1.59700895425178,"down","--","--","--","K09422|0|brp:103828761|K09422 myb proto-oncogene protein, plant | (RefSeq) myb-related protein Myb4","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB15 OS=Arabidopsis thaliana OX=3702 GN=MYB15 PE=1 SV=1","K","Transcription","PREDICTED: myb-related protein Myb4 [Brassica rapa]","--"]
["Bra039040","Bra039040",0.284294,25,0.677063,60,0.774908,52,10.293419,540,6.704703,311,6.967816,336,{"v":8.95073301735045e-09,"d":"8.95E-09"},2.88504718418265,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to insect (GO:0009625);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: very long-chain fatty acid biosynthetic process (GO:0042761);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103837037|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB30-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor MYB30-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra039745","Bra039745",5.20716,705,2.583715,274,4.341139,446,2.295947,215,1.755723,186,1.640721,125,0.00114912193030253,-1.41687929269175,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: RNA methylation (GO:0001510);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: small nucleolar ribonucleoprotein complex (GO:0005732);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: fruit dehiscence (GO:0010047);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: leaf senescence (GO:0010150);; Biological Process: formation of animal organ boundary (GO:0010160);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: positive regulation of cell fate commitment (GO:0010455);; Cellular Component: Cajal body (GO:0015030);; Cellular Component: membrane (GO:0016020);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: protein histidine kinase binding (GO:0043424);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: regulation of timing of animal organ formation (GO:0048504);; Biological Process: root cap development (GO:0048829);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 86 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020)"]
["Bra001385","Bra001385",0.999348,146,4.421508,640,5.197067,701,0.546706,57,0.174232,18,0.285121,29,{"v":4.82240595604807e-07,"d":"4.82E-07"},-3.59079765459358,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: regulation of biological quality (GO:0065008);; ","--","--","--","--","LURP-one-related","Protein LURP-one-related 9 OS=Arabidopsis thaliana OX=3702 GN=At3g10986 PE=3 SV=1","--","--","protein LURP-one-related 9-like [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra020152","Bra020152",0.573648,67,0.218282,48,0.211188,36,1.030424,157,1.288229,183,1.160506,171,{"v":3.49352196878107e-07,"d":"3.49E-07"},1.69820835126316,"up","--","--","Molecular Function: translation initiation factor activity (GO:0003743);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nuclear euchromatin (GO:0005719);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: translational initiation (GO:0006413);; Biological Process: meiotic cell cycle (GO:0007126);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: adaxial/abaxial pattern specification (GO:0009955);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: negative regulation of transposition (GO:0010529);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: Cajal body (GO:0015030);; Biological Process: stem cell population maintenance (GO:0019827);; Biological Process: production of siRNA involved in RNA interference (GO:0030422);; Biological Process: gene silencing by miRNA (GO:0035195);; Molecular Function: siRNA binding (GO:0035197);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: gametophyte development (GO:0048229);; Biological Process: root development (GO:0048364);; Biological Process: leaf development (GO:0048366);; Biological Process: plant ovule development (GO:0048481);; Biological Process: meristem development (GO:0048507);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","K11593|0|brp:103851403|K11593 eukaryotic translation initiation factor 2C | (RefSeq) protein argonaute 9-like","--","[J]","Translation, ribosomal structure and biogenesis","Piwi domain;; N-terminal domain of argonaute;; PAZ domain;; Argonaute linker 1 domain;; Argonaute linker 2 domain;; Mid domain of argonaute","Protein argonaute 9 OS=Arabidopsis thaliana OX=3702 GN=AGO9 PE=2 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: protein argonaute 9-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra012083","Bra012083",0.154213,10,0.092861,7,0.257668,16,9.442423,432,21.59819,951,20.544737,910,{"v":5.03227769985216e-29,"d":"5.03E-29"},5.74601045022074,"up","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein targeting to membrane (GO:0006612);; Molecular Function: poly(U) RNA binding (GO:0008266);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Biological Process: detection of biotic stimulus (GO:0009595);; Cellular Component: photosystem II oxygen evolving complex (GO:0009654);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to chitin (GO:0010200);; Biological Process: photoinhibition (GO:0010205);; Biological Process: photosystem II assembly (GO:0010207);; Molecular Function: oxygen evolving activity (GO:0010242);; Cellular Component: plastoglobule (GO:0010287);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Cellular Component: extrinsic component of membrane (GO:0019898);; Biological Process: cellular cation homeostasis (GO:0030003);; Cellular Component: chloroplast photosystem II (GO:0030095);; Biological Process: cell differentiation (GO:0030154);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: photosystem II stabilization (GO:0042549);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: divalent metal ion transport (GO:0070838);; ","K02716|0|brp:103829589|K02716 photosystem II oxygen-evolving enhancer protein 1 | (RefSeq) PsbO; oxygen-evolving enhancer protein 1-1, chloroplastic","Photosynthesis (ko00195)","--","--","Manganese-stabilising protein / photosystem II polypeptide","Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBO1 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: oxygen-evolving enhancer protein 1-1, chloroplastic [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576)"]
["Bra000252","Bra000252",3.190588,169,7.242863,388,6.581482,323,2.136157,81,0.939075,34,1.80047,66,{"v":5.32044483997462e-05,"d":"5.32E-05"},-2.2492042277836,"down","--","--","Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: protein-disulfide reductase activity (GO:0047134);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","--","--","C1 domain;; Phorbol esters/diacylglycerol binding domain (C1 domain)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103858009 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra040047","Bra040047",1.46087,155,6.935276,731,6.807831,654,0,0,0.117355,11,0,0,0.00586888585013688,-3.44704735918293,"down","[V]","Defense mechanisms","Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: cellular iron ion homeostasis (GO:0006879);; Biological Process: defense response (GO:0006952);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: citrate transmembrane transporter activity (GO:0015137);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Biological Process: nitrate transport (GO:0015706);; Biological Process: citrate transport (GO:0015746);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to nitric oxide (GO:0071732);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","--","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 43-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: transporter activity (GO:0005215);; cellular component: organelle (GO:0043226);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra022354","Bra022354",29.235235,1214,19.026968,798,19.665911,756,16.125601,474,8.559821,243,8.003272,228,{"v":4.81171834919093e-05,"d":"4.81E-05"},-1.54697424324977,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: pollen development (GO:0009555);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: response to chitin (GO:0010200);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: regulation of jasmonic acid biosynthetic process (GO:0080141);; ","K19040|1.2315e-136|brp:103869527|K19040 E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27] | (RefSeq) RING-H2 finger protein ATL77","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger)","RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: RING-H2 finger protein ATL77 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra005512","Bra005512",0.318724,56,0.746091,126,1.077897,154,3.719583,423,3.588134,379,2.39283,265,0.00686231161082799,1.48329438442722,"up","[E]","Amino acid transport and metabolism","Biological Process: cell fate specification (GO:0001708);; Biological Process: amino acid transmembrane transport (GO:0003333);; Molecular Function: L-tyrosine transmembrane transporter activity (GO:0005302);; Biological Process: purine nucleobase transport (GO:0006863);; Cellular Component: plastid (GO:0009536);; Biological Process: tyrosine transport (GO:0015828);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Tryptophan/tyrosine permease family;; Transmembrane amino acid transporter protein","--","E","Amino acid transport and metabolism","PREDICTED: uncharacterized protein LOC103867552 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra031422","Bra031422",2.304005,313,2.035826,276,2.111933,261,8.096381,733,11.085803,932,7.880272,739,{"v":5.79691379757511e-12,"d":"5.80E-12"},1.44262730708365,"up","[R]","General function prediction only","Biological Process: polyamine biosynthetic process (GO:0006596);; Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810);; Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (GO:0016811);; ","K12251|3.85956e-13|rcu:8271935|K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] | (RefSeq) N-carbamoylputrescine amidase","Arginine and proline metabolism (ko00330)","[E]","Amino acid transport and metabolism","--","N-carbamoylputrescine amidase OS=Solanum tuberosum OX=4113 GN=CPA PE=2 SV=1","--","--","Carbon-nitrogen hydrolase [Macleaya cordata]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)"]
["Brassica_rapa_newGene_12094","--",132.782349,4886,171.382568,6364,147.061905,5006,105.185547,2739,29.122313,730,31.905579,805,0.000659536814251135,-1.89620426498669,"down","[R]","General function prediction only","Cellular Component: extracellular region (GO:0005576);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Stigma-specific protein, Stig1","Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g50720 PE=2 SV=1","S","Function unknown","stigma-specific STIG1-like protein 1 [Brassica napus]","cellular component: extracellular region (GO:0005576);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra005725","Bra005725",0.409902,40,0.645601,56,0.874133,74,7.84934,483,8.827024,530,7.065952,424,{"v":5.81571373886493e-14,"d":"5.82E-14"},2.91472175860481,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: tissue development (GO:0009888);; Biological Process: response to chitin (GO:0010200);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: animal organ development (GO:0048513);; ","--","--","--","--","Dof domain, zinc finger","Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV=1","S","Function unknown","PREDICTED: dof zinc finger protein DOF5.1-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra038285","Bra038285",2.662354,279,2.540601,269,2.281182,222,10.480562,777,11.236326,802,10.887838,782,{"v":1.05275014118843e-21,"d":"1.05E-21"},1.56287487403153,"up","--","--","Molecular Function: binding (GO:0005488);; Biological Process: cellular process (GO:0009987);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Reverse transcriptase-like;; IBR domain, a half RING-finger domain","ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01020 PE=3 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103873416 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)"]
["Bra025490","Bra025490",2.562692,88,2.487829,86,5.264893,166,0.167099,5,0,0,0,0,{"v":9.12765835975256e-08,"d":"9.13E-08"},-4.96846407598614,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=2 SV=1","K","Transcription","BnaA04g11210D [Brassica napus]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra009154","Bra009154",9.556541,1285,5.740048,763,5.688538,699,5.571475,537,5.017023,447,4.352266,395,0.000318768424457895,-1.00391215282669,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: proteolysis (GO:0006508);; Biological Process: lipid transport (GO:0006869);; Molecular Function: peptidase activity (GO:0008233);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","--","Probable lipid transfer","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103846942 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra027044","Bra027044",11.623661,1665,4.91782,711,5.481987,727,3.972623,403,1.842203,180,2.420933,238,{"v":4.35982534921757e-05,"d":"4.36E-05"},-1.85954322338014,"down","[K]","Transcription","Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: structural constituent of cell wall (GO:0005199);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: unidimensional cell growth (GO:0009826);; Molecular Function: histidine phosphotransfer kinase activity (GO:0009927);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair elongation (GO:0048767);; ","--","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain","Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=2 SV=1","S","Function unknown","leucine-rich repeat extensin-like protein 2 [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: growth (GO:0040007);; biological process: metabolic process (GO:0008152);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; biological process: multicellular organismal process (GO:0032501)"]
["Bra022525","Bra022525",0.039254,5,0.017711,2,0.112039,8,0.963158,71,1.640295,105,2.206203,128,{"v":2.95187905298703e-09,"d":"2.95E-09"},3.92061526712853,"up","[R]","General function prediction only","Cellular Component: extracellular region (GO:0005576);; Biological Process: steroid metabolic process (GO:0008202);; Biological Process: lipid biosynthetic process (GO:0008610);; Cellular Component: plastid (GO:0009536);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to brassinosteroid (GO:0009741);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Molecular Function: 11-beta-hydroxysteroid dehydrogenase (NADP+) activity (GO:0070524);; Molecular Function: 17-beta-ketosteroid reductase activity (GO:0072555);; Molecular Function: 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (GO:0072582);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","short chain dehydrogenase;; Enoyl-(Acyl carrier protein) reductase","11-beta-hydroxysteroid dehydrogenase-like 6 OS=Arabidopsis thaliana OX=3702 GN=HSD6 PE=2 SV=1","S","Function unknown","BnaA02g11550D [Brassica napus]","cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987)"]
["Bra026404","Bra026404",1.900453,214,5.293199,608,4.874821,536,0.091827,9,0,0,0,0,{"v":4.51065021410715e-10,"d":"4.51E-10"},-5.84810004372036,"down","[R]","General function prediction only","Molecular Function: phosphatidate cytidylyltransferase activity (GO:0004605);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: phospholipid biosynthetic process (GO:0008654);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: CDP-diacylglycerol biosynthetic process (GO:0016024);; Biological Process: dolichol biosynthetic process (GO:0019408);; ","K00981|0|brp:103866590|K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] | (RefSeq) phosphatidate cytidylyltransferase 3","Glycerophospholipid metabolism (ko00564);; Phosphatidylinositol signaling system (ko04070)","[I]","Lipid transport and metabolism","Cytidylyltransferase family","Phosphatidate cytidylyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=CDS3 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: phosphatidate cytidylyltransferase 3 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra013647","Bra013647",13.179907,1857,8.316038,1224,10.381591,1319,1.004913,116,0.349503,43,0.320792,32,{"v":8.41682641305098e-19,"d":"8.42E-19"},-4.36571937640036,"down","[OT]","Posttranslational modification, protein turnover, chaperones;; Signal transduction mechanisms","Cellular Component: cytosol (GO:0005829);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to abscisic acid (GO:0009737);; Molecular Function: amino acid binding (GO:0016597);; ","--","--","--","--","ACT domain;; Reverse transcriptase-like;; ACT domain;; ACT domain","ACT domain-containing protein ACR7 OS=Arabidopsis thaliana OX=3702 GN=ACR7 PE=2 SV=1","S","Function unknown","BnaA01g12490D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)"]
["Bra016801","Bra016801",1.32172,224,0.662949,112,0.623262,96,5.679857,679,6.410229,719,5.524649,667,{"v":2.41058860090469e-11,"d":"2.41E-11"},2.2055694046814,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; ","K15601|0|brp:103836196|K15601 lysine-specific demethylase 3 [EC:1.14.11.-] | (RefSeq) lysine-specific demethylase JMJ25","--","[K]","Transcription","JmjC domain, hydroxylase","Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana OX=3702 GN=JMJ25 PE=1 SV=1","S","Function unknown","PREDICTED: lysine-specific demethylase JMJ25 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra001768","Bra001768",0.116238,28,0.044999,11,0.062976,14,0.278343,47,0.396569,65,0.433681,71,0.00419941752861915,1.67333116521618,"up","--","--","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: motor activity (GO:0003774);; Molecular Function: enzyme inhibitor activity (GO:0004857);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: regulation of carbohydrate metabolic process (GO:0006109);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein acetylation (GO:0006473);; Biological Process: cellular iron ion homeostasis (GO:0006879);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: enzyme activator activity (GO:0008047);; Biological Process: response to cold (GO:0009409);; Cellular Component: cell plate (GO:0009504);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: phragmoplast (GO:0009524);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: embryo development (GO:0009790);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: photosystem II assembly (GO:0010207);; Cellular Component: stromule (GO:0010319);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: myosin complex (GO:0016459);; Molecular Function: Rab GTPase binding (GO:0017137);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: GTP-dependent protein binding (GO:0030742);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: positive regulation of programmed cell death (GO:0043068);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: intracellular transport (GO:0046907);; Cellular Component: apoplast (GO:0048046);; Biological Process: seed development (GO:0048316);; Biological Process: gynoecium development (GO:0048467);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell division (GO:0051301);; Biological Process: Golgi localization (GO:0051645);; Biological Process: mitochondrion localization (GO:0051646);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: peroxisome localization (GO:0060151);; Biological Process: leaf pavement cell development (GO:0090436);; ","K10357|0|brp:103859831|K10357 myosin V | (RefSeq) myosin-1-like","--","[Z]","Cytoskeleton","Myosin head (motor domain);; IQ calmodulin-binding motif","Myosin-1 OS=Arabidopsis thaliana OX=3702 GN=VIII-1 PE=1 SV=1","Z","Cytoskeleton","PREDICTED: myosin-1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: catalytic activity (GO:0003824);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991);; molecular function: transporter activity (GO:0005215);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra030589","Bra030589",53.295283,3281,43.256261,2703,45.162995,2558,17.610348,766,6.199425,337,6.117183,279,{"v":5.75305803766087e-10,"d":"5.75E-10"},-2.59642869670398,"down","[R]","General function prediction only","Biological Process: chloroplast organization (GO:0009658);; ","--","--","--","--","Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis thaliana OX=3702 GN=At1g04770 PE=2 SV=1","S","Function unknown","PREDICTED: protein SULFUR DEFICIENCY-INDUCED 2-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra004745","Bra004745",6.47443,383,5.037038,303,2.762626,180,13.056485,549,14.954584,613,19.729912,833,0.000843134501927196,1.16178910767345,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","U3-containing 90S pre-ribosomal complex subunit","--","S","Function unknown","PREDICTED: protein CMSS1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra003045","Bra003045",0.644206,60,0.328394,29,0.336993,27,2.111461,110,1.894922,113,2.342901,130,0.000488595891964501,1.54064037067603,"up","[R]","General function prediction only","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: response to stress (GO:0006950);; Biological Process: pyridoxal 5'-phosphate salvage (GO:0009443);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: plastoglobule (GO:0010287);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: pyridoxal biosynthetic process (GO:0042821);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: single-organism transport (GO:0044765);; Molecular Function: 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity (GO:0047006);; Molecular Function: pyridoxine:NADP 4-dehydrogenase activity (GO:0050236);; Biological Process: cellular response to stimulus (GO:0051716);; Molecular Function: NADPH binding (GO:0070402);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","K05275|0|brp:103844833|K05275 pyridoxine 4-dehydrogenase [EC:1.1.1.65] | (RefSeq) pyridoxal reductase, chloroplastic","Vitamin B6 metabolism (ko00750)","[C]","Energy production and conversion","Aldo/keto reductase family","Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PLR1 PE=1 SV=1","C","Energy production and conversion","PREDICTED: pyridoxal reductase, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra010610","Bra010610",1.22425,133,0.649505,71,0.802605,106,4.368291,255,4.277961,268,4.608303,279,{"v":5.767891989729e-05,"d":"5.77E-05"},1.30847719826729,"up","--","--","Molecular Function: RNA polymerase II transcription factor activity, sequence-specific DNA binding (GO:0000981);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: regulation of glycolytic process (GO:0006110);; Biological Process: DNA methylation (GO:0006306);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: gamete generation (GO:0007276);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: xylem development (GO:0010089);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: maintenance of shoot apical meristem identity (GO:0010492);; Biological Process: RNA interference (GO:0016246);; Biological Process: triglyceride biosynthetic process (GO:0019432);; Biological Process: stem cell population maintenance (GO:0019827);; Biological Process: regulation of cell proliferation (GO:0042127);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: positive regulation of fatty acid biosynthetic process (GO:0045723);; Biological Process: seed development (GO:0048316);; Biological Process: root development (GO:0048364);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: plant ovule development (GO:0048481);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: phyllotactic patterning (GO:0060771);; Biological Process: positive regulation of cutin biosynthetic process (GO:1901959);; ","K09285|0|brp:103835046|K09285 AP2-like factor, ANT lineage | (RefSeq) AP2-like ethylene-responsive transcription factor ANT","--","--","--","AP2 domain","AP2-like ethylene-responsive transcription factor ANT OS=Arabidopsis thaliana OX=3702 GN=ANT PE=1 SV=2","K","Transcription","PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X2 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502)"]
["Bra013148","Bra013148",0.809335,65,0.5619,46,0.587877,48,17.663631,976,26.070194,1391,23.781364,1276,{"v":2.4862111515466e-60,"d":"2.49E-60"},4.41926147695524,"up","[EF]","Amino acid transport and metabolism;; Nucleotide transport and metabolism","Molecular Function: serine-pyruvate transaminase activity (GO:0004760);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: water transport (GO:0006833);; Molecular Function: alanine-glyoxylate transaminase activity (GO:0008453);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: photorespiration (GO:0009853);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Cellular Component: apoplast (GO:0048046);; Molecular Function: serine-glyoxylate transaminase activity (GO:0050281);; Biological Process: divalent metal ion transport (GO:0070838);; ","K00830|0|bna:106439758|K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] | (RefSeq) serine--glyoxylate aminotransferase-like","Alanine, aspartate and glutamate metabolism (ko00250);; Glycine, serine and threonine metabolism (ko00260);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200);; Peroxisome (ko04146)","[R]","General function prediction only","Aminotransferase class-V","Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana OX=3702 GN=AGT1 PE=1 SV=2","E","Amino acid transport and metabolism","serine--glyoxylate aminotransferase isoform X1 [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Brassica_rapa_newGene_27374","--",0.214594,27,0.417083,52,0.308397,36,1.404048,123,1.844001,155,1.499829,127,0.000305942097318474,1.68266621859362,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","--","--","--","--","PREDICTED: probable calcium-binding protein CML41 [Raphanus sativus]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)"]
["Bra029036","Bra029036",1.681777,162,1.576366,145,0.79417,78,4.389556,299,4.673375,281,3.664896,234,0.00344911038025551,1.03238601725924,"up","--","--","Biological Process: rRNA processing (GO:0006364);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to wounding (GO:0009611);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to ozone (GO:0010193);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to UV-B (GO:0010224);; Cellular Component: membrane (GO:0016020);; Cellular Component: chloroplast photosystem II (GO:0030095);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; ","--","--","--","--","--","Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBT PE=3 SV=2","--","--","hypothetical protein AALP_AA4G045700 [Arabis alpina]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Brassica_rapa_newGene_20503","--",3.596662,368,2.424098,251,2.915531,276,7.885755,571,10.535334,734,12.816381,898,{"v":1.4423023156558e-05,"d":"1.44E-05"},1.24546592235296,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra017798","Bra017798",9.52912,791,24.65737,2045,28.865614,2172,2.309124,135,0.757034,48,1.032719,59,{"v":2.77437953466906e-13,"d":"2.77E-13"},-4.20922169022294,"down","[R]","General function prediction only","Molecular Function: phospholipase activity (GO:0004620);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lateral root formation (GO:0010311);; Molecular Function: nutrient reservoir activity (GO:0045735);; ","--","--","[I]","Lipid transport and metabolism","Patatin-like phospholipase","Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2","S","Function unknown","PREDICTED: patatin-like protein 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: nutrient reservoir activity (GO:0045735)"]
["Bra004721","Bra004721",0.922473,67,0.831933,75,1.921788,124,8.374438,396,8.934894,429,9.863341,430,{"v":2.80495250112199e-07,"d":"2.80E-07"},2.09007779812692,"up","[C]","Energy production and conversion","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: protein binding (GO:0005515);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein folding (GO:0006457);; Biological Process: response to stress (GO:0006950);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Molecular Function: heat shock protein binding (GO:0031072);; Biological Process: response to chemical (GO:0042221);; Molecular Function: unfolded protein binding (GO:0051082);; Molecular Function: iron-sulfur cluster binding (GO:0051536);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","DnaJ domain;; 4Fe-4S single cluster domain of Ferredoxin I;; 4Fe-4S single cluster domain","Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJC76 PE=2 SV=1","C","Energy production and conversion","PREDICTED: uncharacterized protein LOC103866667 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: electron carrier activity (GO:0009055);; cellular component: membrane (GO:0016020)"]
["Bra015882","Bra015882",5.903112,216,9.969222,367,8.689241,294,5.61003,145,4.49177,112,6.442769,162,0.00642331048251001,-1.11154215139743,"down","--","--","Biological Process: defense response to insect (GO:0002213);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to chitin (GO:0010200);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana OX=3702 GN=ERF018 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF018 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra027214","Bra027214",2.204485,88,2.467902,101,1.168336,54,6.349343,194,6.7384,183,7.435853,204,0.000636615384891476,1.1936106024606,"up","[U]","Intracellular trafficking, secretion, and vesicular transport","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: signal peptide processing (GO:0006465);; Biological Process: proteolysis (GO:0006508);; Molecular Function: serine-type peptidase activity (GO:0008236);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; ","K13280|2.96996e-125|brp:103869883|K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] | (RefSeq) signal peptidase complex catalytic subunit SEC11C-like","Protein export (ko03060)","[U]","Intracellular trafficking, secretion, and vesicular transport","Peptidase S24-like","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: signal peptidase complex catalytic subunit SEC11C-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425)"]
["Bra014802","Bra014802",2.824096,285,1.748063,166,1.456418,133,0.357316,39,0.303667,32,0.460187,48,{"v":4.79479412214897e-08,"d":"4.79E-08"},-2.24115671960786,"down","--","--","Cellular Component: male germ cell nucleus (GO:0001673);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen development (GO:0009555);; Biological Process: response to ethylene (GO:0009723);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: embryo development (GO:0009790);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: generative cell mitosis (GO:0055047);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to glucose stimulus (GO:0071333);; Biological Process: positive regulation of seed maturation (GO:2000693);; ","--","--","--","--","Basic leucine-zipper C terminal;; bZIP transcription factor;; Basic region leucine zipper;; bZIP Maf transcription factor","F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1","S","Function unknown","PREDICTED: F-box/LRR-repeat protein 17-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra010209","Bra010209",2.774987,258,3.624202,340,4.373363,376,1.626521,107,0.890955,57,0.78402,50,{"v":1.91877285105749e-06,"d":"1.92E-06"},-2.18726947449474,"down","[K]","Transcription","Biological Process: MAPK cascade (GO:0000165);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: defense response (GO:0006952);; Biological Process: organelle organization (GO:0006996);; Biological Process: signal transduction (GO:0007165);; Biological Process: epidermis development (GO:0008544);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: embryo development (GO:0009790);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: response to organic substance (GO:0010033);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Biological Process: phosphorylation (GO:0016310);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of anatomical structure morphogenesis (GO:0022603);; Biological Process: cell differentiation (GO:0030154);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: regulation of growth (GO:0040008);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism transport (GO:0044765);; Biological Process: gametophyte development (GO:0048229);; Biological Process: meristem development (GO:0048507);; Biological Process: developmental growth (GO:0048589);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anther development (GO:0048653);; Biological Process: cell division (GO:0051301);; Biological Process: response to karrikin (GO:0080167);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat;; Leucine Rich repeat","LRR receptor-like serine/threonine-protein kinase FLS2 OS=Oryza sativa subsp. japonica OX=39947 GN=FLS2 PE=1 SV=1","S","Function unknown","LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase ERL1 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414)"]
["Bra015692","Bra015692",1.954288,120,1.521072,95,1.50259,87,4.38112,194,5.524182,233,6.024726,262,{"v":7.27474185023713e-05,"d":"7.27E-05"},1.13581812314374,"up","--","--","--","--","--","--","--","RimP N-terminal domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103832165 [Brassica rapa]","--"]
["Bra023979","Bra023979",41.615985,3632,39.656471,3726,40.10008,3453,19.804104,1407,23.602211,1616,22.583574,1612,{"v":1.82616899713203e-13,"d":"1.83E-13"},-1.26997843564026,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Cellular Component: protein serine/threonine phosphatase complex (GO:0008287);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: cellular response to water deprivation (GO:0042631);; Cellular Component: cytoplasmic part (GO:0044444);; Molecular Function: metal ion binding (GO:0046872);; ","K17499|0|brp:103862087|K17499 protein phosphatase 1G [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 60","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Stage II sporulation protein E (SpoIIE)","Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana OX=3702 GN=At4g31860 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 60 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra019294","Bra019294",2.96443,248,3.506714,301,2.610469,235,0.355594,26,0.729632,49,0.435829,30,{"v":7.06339833269846e-13,"d":"7.06E-13"},-2.87034455746195,"down","[E]","Amino acid transport and metabolism","Biological Process: regulation of cell growth by extracellular stimulus (GO:0001560);; Molecular Function: L-alanine:2-oxoglutarate aminotransferase activity (GO:0004021);; Molecular Function: L-aspartate:2-oxoglutarate aminotransferase activity (GO:0004069);; Molecular Function: cystathionine beta-lyase activity (GO:0004121);; Molecular Function: L-tyrosine:2-oxoglutarate aminotransferase activity (GO:0004838);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: L-phenylalanine catabolic process (GO:0006559);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: tyrosine catabolic process (GO:0006572);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to microbial phytotoxin (GO:0010188);; Biological Process: vitamin E biosynthetic process (GO:0010189);; Cellular Component: membrane (GO:0016020);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: nicotianamine aminotransferase activity (GO:0033855);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Cellular Component: apoplast (GO:0048046);; Biological Process: adventitious root development (GO:0048830);; Molecular Function: L-tryptophan:2-oxoglutarate aminotransferase activity (GO:0050362);; Molecular Function: S-alkylthiohydroximate lyase activity (GO:0080108);; ","K00815|0|brp:103861408|K00815 tyrosine aminotransferase [EC:2.6.1.5] | (RefSeq) probable aminotransferase TAT4","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Cysteine and methionine metabolism (ko00270);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Aminotransferase class I and II","Probable aminotransferase TAT4 OS=Arabidopsis thaliana OX=3702 GN=At4g23590 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: probable aminotransferase TAT4 [Brassica rapa]","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: extracellular region (GO:0005576)"]
["Bra008088","Bra008088",5.143698,214,8.248717,346,6.522758,251,0.1049,4,0.071692,3,0,0,{"v":1.18780426029754e-22,"d":"1.19E-22"},-6.31616651917263,"down","--","--","Molecular Function: endopeptidase inhibitor activity (GO:0004866);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to nitrate (GO:0010167);; Biological Process: programmed cell death (GO:0012501);; Biological Process: nitrate transport (GO:0015706);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; ","--","--","--","--","Trypsin and protease inhibitor","Kunitz trypsin inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=KTI1 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: alpha-amylase/subtilisin inhibitor-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra036896","Bra036896",36.606049,2411,32.513207,2421,35.33272,2219,23.471885,1219,12.503844,616,12.413251,612,{"v":8.28670436669459e-06,"d":"8.29E-06"},-1.55456579166143,"down","--","--","Cellular Component: anchored component of membrane (GO:0031225);; ","--","--","--","--","--","--","S","Function unknown","BnaA01g19010D [Brassica napus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra014968","Bra014968",1.209943,79,0.971724,64,1.196062,72,0.265994,13,0.777417,35,0.559733,25,0.00794326973577388,-1.51828032283827,"down","[J]","Translation, ribosomal structure and biogenesis","--","K10760|0|brp:103828720|K10760 adenylate dimethylallyltransferase (cytokinin synthase) [EC:2.5.1.27 2.5.1.112] | (RefSeq) BrIPT7; adenylate isopentenyltransferase 7, mitochondrial","Zeatin biosynthesis (ko00908)","[J]","Translation, ribosomal structure and biogenesis","IPP transferase;; Isopentenyl transferase","Adenylate isopentenyltransferase 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IPT7 PE=2 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: adenylate isopentenyltransferase 7, mitochondrial [Brassica rapa]","--"]
["Bra001742","Bra001742",0.512856,46,0.555681,50,0.74935,54,1.586589,110,6.784756,380,1.613305,143,0.00225410344380446,1.88821360309042,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: photoperiodism (GO:0009648);; Biological Process: response to salt stress (GO:0009651);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: glucose mediated signaling pathway (GO:0010255);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K14432|0|brp:103859804|K14432 ABA responsive element binding factor | (RefSeq) ABSCISIC ACID-INSENSITIVE 5-like protein 7","Plant hormone signal transduction (ko04075)","--","--","bZIP transcription factor;; Basic region leucine zipper","ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=ABF4 PE=1 SV=1","K","Transcription","PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra000301","Bra000301",1.32767,47,0.150824,6,0.220628,8,3.0359,76,11.96377,287,14.823202,357,0.000216513417550626,3.13231995096935,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast (GO:0009507);; ","--","--","[R]","General function prediction only","Protein of unknown function (DUF1685)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103858065 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra001617","Bra001617",2.213754,219,2.775515,255,2.353367,181,0.804565,29,1.266413,84,1.666878,75,0.000708405989466482,-1.76143834344883,"down","[P]","Inorganic ion transport and metabolism","--","K17471|0|brp:103859652|K17471 sulfate transporter 3 | (RefSeq) probable sulfate transporter 3.4","--","[P]","Inorganic ion transport and metabolism","Sulfate permease family;; STAS domain","Probable sulfate transporter 3.4 OS=Arabidopsis thaliana OX=3702 GN=SULTR3;4 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: probable sulfate transporter 3.4 [Brassica rapa]","--"]
["Bra000867","Bra000867",4.807966,287,4.980232,312,5.610706,279,16.609124,751,50.228964,2063,42.800771,1867,{"v":2.36621888866536e-07,"d":"2.37E-07"},2.28339600729193,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: regulation of protein localization (GO:0032880);; ","--","--","--","--","Dormancy/auxin associated protein","Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1","S","Function unknown","dormancy-associated protein homolog 3-like isoform X2 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra018885","Bra018885",2.974936,1005,0.913667,358,1.013513,332,4.801062,1195,7.394511,1530,7.125348,1578,0.00368798566140871,1.31471531557185,"up","--","--","--","K00888|0|brp:103871306|K00888 phosphatidylinositol 4-kinase A [EC:2.7.1.67] | (RefSeq) phosphatidylinositol 4-kinase alpha 1","Inositol phosphate metabolism (ko00562);; Phosphatidylinositol signaling system (ko04070)","[T]","Signal transduction mechanisms","Phosphatidylinositol 3- and 4-kinase;; Phosphoinositide 3-kinase family, accessory domain (PIK domain)","Phosphatidylinositol 4-kinase alpha 1 OS=Arabidopsis thaliana OX=3702 GN=PI4KA1 PE=1 SV=2","BDLTU","Chromatin structure and dynamics;; Cell cycle control, cell division, chromosome partitioning;; Replication, recombination and repair;; Signal transduction mechanisms;; Intracellular trafficking, secretion, and vesicular transport","PREDICTED: phosphatidylinositol 4-kinase alpha 1 isoform X1 [Brassica rapa]","--"]
["Bra008371","Bra008371",0.129734,8,0.340393,20,0.335592,18,1.621871,65,2.665961,103,2.101404,82,0.000331826003474767,2.20367996256442,"up","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: glycolytic process (GO:0006096);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to bacterium (GO:0009617);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: shade avoidance (GO:0009641);; Biological Process: response to salt stress (GO:0009651);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Cellular Component: nuclear speck (GO:0016607);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","B-box zinc finger","B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2","S","Function unknown","PREDICTED: B-box zinc finger protein 22-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: rhythmic process (GO:0048511);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422)"]
["Bra007229","Bra007229",2.009845,124,3.763235,231,3.877422,218,0.20415,13,0.367554,17,0.298264,18,{"v":9.79122268466885e-12,"d":"9.79E-12"},-3.48711220243627,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to hormone (GO:0009725);; Biological Process: proximal/distal pattern formation (GO:0009954);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: floral organ abscission (GO:0010227);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Cellular Component: Cul3-RING ubiquitin ligase complex (GO:0031463);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K10523|0|brp:103841532|K10523 speckle-type POZ protein | (RefSeq) BTB/POZ domain-containing protein At3g56230","--","[DR]","Cell cycle control, cell division, chromosome partitioning;; General function prediction only","BTB/POZ domain","BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana OX=3702 GN=At3g56230 PE=2 SV=1","S","Function unknown","PREDICTED: BTB/POZ domain-containing protein At3g56230 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: metabolic process (GO:0008152);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra003753","Bra003753",1.579481,148,2.086093,206,1.848995,163,6.776212,450,7.196235,463,8.088802,522,{"v":1.67697160013945e-06,"d":"1.68E-06"},1.38956613003108,"up","--","--","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: regionalization (GO:0003002);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: fatty acid metabolic process (GO:0006631);; Biological Process: coenzyme metabolic process (GO:0006732);; Biological Process: signal transduction (GO:0007165);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: serine family amino acid metabolic process (GO:0009069);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: positive regulation of biosynthetic process (GO:0009891);; Biological Process: maintenance of meristem identity (GO:0010074);; Biological Process: fruit development (GO:0010154);; Biological Process: polar nucleus fusion (GO:0010197);; Biological Process: response to continuous far red light stimulus by the high-irradiance response system (GO:0010201);; Biological Process: membrane organization (GO:0016044);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: regulation of lipid metabolic process (GO:0019216);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Biological Process: innate immune response (GO:0045087);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: animal organ formation (GO:0048645);; Biological Process: cellular response to organic cyclic compound (GO:0071407);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; ","--","--","[K]","Transcription","Associated with HOX;; Homeobox KN domain;; Homeobox domain","BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana OX=3702 GN=BLH3 PE=1 SV=1","K","Transcription","PREDICTED: BEL1-like homeodomain protein 3 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376)"]
["Bra001414","Bra001414",3.619462,357,3.575665,381,3.146256,302,9.650844,736,9.934036,679,14.170327,993,{"v":1.43040493934027e-05,"d":"1.43E-05"},1.14789670434987,"up","--","--","--","--","--","--","--","Lipid-droplet associated hydrolase;; Alpha/beta hydrolase family","--","S","Function unknown","PREDICTED: lipid droplet-associated hydrolase-like [Brassica rapa] ","--"]
["Bra030159","Bra030159",20.814886,1192,20.298557,1184,19.693002,1057,9.682342,400,11.403394,465,12.734762,509,{"v":4.20544426631884e-12,"d":"4.21E-12"},-1.36244369886433,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: cation transport (GO:0006812);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of salicylic acid metabolic process (GO:0010337);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: ATPase-coupled arsenite transmembrane transporter activity (GO:0015446);; Biological Process: arsenite transport (GO:0015700);; Cellular Component: membrane (GO:0016020);; Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity (GO:0016756);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: cadmium ion binding (GO:0046870);; Biological Process: phytochelatin biosynthetic process (GO:0046938);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: phytochelatin transmembrane transporter activity (GO:0071992);; ","--","--","--","--","MAC/Perforin domain","MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana OX=3702 GN=CAD1 PE=2 SV=1","--","--","PREDICTED: MACPF domain-containing protein CAD1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: multi-organism process (GO:0051704)"]
["Bra037352","Bra037352",1.589387,100,3.248837,205,2.859971,174,0,0,0,0,0.118504,5,{"v":3.80809338385049e-10,"d":"3.81E-10"},-5.49249632205452,"down","--","--","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: actin binding (GO:0003779);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: actin filament (GO:0005884);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: cell growth (GO:0016049);; Biological Process: actin filament depolymerization (GO:0030042);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: Golgi vesicle transport (GO:0048193);; ","K05765|3.15684e-99|brp:103836903|K05765 cofilin | (RefSeq) actin-depolymerizing factor 8","--","[Z]","Cytoskeleton","Cofilin/tropomyosin-type actin-binding protein;; Remorin, C-terminal region","Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2","S","Function unknown","BnaA09g51810D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; cellular component: extracellular region (GO:0005576)"]
["Bra012150","Bra012150",24.802715,2411,44.874569,4100,46.192833,3869,8.557035,589,8.682555,575,9.573835,594,{"v":4.34051767646625e-15,"d":"4.34E-15"},-2.59425247190753,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: binding (GO:0005488);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Biological Process: response to UV (GO:0009411);; Biological Process: response to auxin (GO:0009733);; Cellular Component: membrane (GO:0016020);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: flavonoid 3'-monooxygenase activity (GO:0016711);; Biological Process: glucosinolate metabolic process (GO:0019760);; Molecular Function: oxygen binding (GO:0019825);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: terpene biosynthetic process (GO:0046246);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to iron ion (GO:0071281);; Molecular Function: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity (GO:0097007);; Molecular Function: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity (GO:0097008);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 81D1 OS=Arabidopsis thaliana OX=3702 GN=CYP81D1 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 81D1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704)"]
["Brassica_rapa_newGene_2156","--",0.08192,8,0.068871,7,0.200343,17,2.485313,153,4.673517,279,4.767518,286,{"v":2.83162403401908e-13,"d":"2.83E-13"},4.14298573561928,"up","--","--","--","K09534|3.26713e-42|eus:EUTSA_v10003750mg|K09534 DnaJ homolog subfamily C member 14 | (RefSeq) hypothetical protein","--","[O]","Posttranslational modification, protein turnover, chaperones","--","--","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC18012097 [Eutrema salsugineum] ","--"]
["Bra017317","Bra017317",98.028374,10792,115.099305,12853,129.690685,13197,65.769503,5176,47.617988,3606,43.737338,3312,{"v":6.58705362432991e-09,"d":"6.59E-09"},-1.65668179341919,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to superoxide (GO:0000303);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein glycosylation (GO:0006486);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: nitric oxide biosynthetic process (GO:0006809);; Biological Process: water transport (GO:0006833);; Biological Process: membrane fusion (GO:0006944);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: embryo development (GO:0009790);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: lateral root morphogenesis (GO:0010102);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of reactive oxygen species metabolic process (GO:2000377);; ","--","--","--","--","RCD1-SRO-TAF4 (RST) plant domain","Probable inactive poly [ADP-ribose] polymerase SRO1 OS=Arabidopsis thaliana OX=3702 GN=SRO1 PE=1 SV=2","S","Function unknown","PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO1 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501)"]
["Bra026834","Bra026834",24.373681,2905,49.058337,5922,50.151299,5521,19.052015,1614,13.02962,1047,12.08301,990,{"v":2.12759737082673e-06,"d":"2.13E-06"},-2.00625863523614,"down","[T]","Signal transduction mechanisms","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K00924|0|brp:103842971|K00924 [EC:2.7.1.-] | (RefSeq) protein kinase 2A, chloroplastic","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PBL2 OS=Arabidopsis thaliana OX=3702 GN=PBL2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: protein kinase 2A, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra003219","Bra003219",42.271865,4724,18.90922,2134,19.449572,2026,17.527492,1404,8.794378,673,8.09233,626,0.000256448478777724,-1.66667469812477,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103830022 isoform X1 [Brassica rapa]","--"]
["Bra024717","Bra024717",1.375876,141,2.190015,227,2.083182,198,4.277079,310,23.435524,1635,22.603733,1587,0.000195251289537199,2.388897677227,"up","[C]","Energy production and conversion","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: endoplasmic reticulum (GO:0005783);; Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to chitin (GO:0010200);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to hypoxia (GO:0071456);; ","--","--","--","--","FAD binding domain;; Berberine and berberine like","Berberine bridge enzyme-like 7 OS=Arabidopsis thaliana OX=3702 GN=FOX5 PE=3 SV=1","C","Energy production and conversion","PREDICTED: flavin-dependent oxidoreductase FOX5-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)"]
["Bra027285","Bra027285",59.165619,4848,39.771956,3284,38.674851,2971,126.616021,7311,144.213672,8009,133.960575,7577,{"v":2.89390269780849e-08,"d":"2.89E-08"},1.01050410429911,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cytidine to uridine editing (GO:0016554);; Biological Process: root development (GO:0048364);; Biological Process: cell development (GO:0048468);; Biological Process: developmental growth (GO:0048589);; Molecular Function: cobalt ion binding (GO:0050897);; Biological Process: mitochondrial mRNA modification (GO:0080156);; ","--","--","--","--","--","Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1","S","Function unknown","PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: growth (GO:0040007)"]
["Bra000469","Bra000469",0.062672,10,0.117756,26,0.150655,14,0.259383,51,2.669589,268,1.793049,223,{"v":6.48611274872395e-05,"d":"6.49E-05"},3.01746580887843,"up","[T]","Signal transduction mechanisms","Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);; Molecular Function: ATPase-coupled organic phosphonate transmembrane transporter activity (GO:0015416);; Biological Process: cadmium ion transport (GO:0015691);; Biological Process: lead ion transport (GO:0015692);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: lupeol synthase activity (GO:0042299);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: ATP-binding cassette (ABC) transporter complex (GO:0043190);; Biological Process: negative regulation of MAP kinase activity (GO:0043407);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: cellular response to indolebutyric acid stimulus (GO:0071366);; Biological Process: abscisic acid transport (GO:0080168);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC-2 type transporter;; ABC transporter;; Plant PDR ABC transporter associated;; ABC-transporter extracellular N-terminal;; AAA domain, putative AbiEii toxin, Type IV TA system;; RsgA GTPase;; AAA domain;; P-loop containing region of AAA domain;; AAA domain;; AAA domain;; ATPase family associated with various cellular activities (AAA)","ABC transporter G family member 31 OS=Arabidopsis thaliana OX=3702 GN=ABCG31 PE=1 SV=1","V","Defense mechanisms","PREDICTED: ABC transporter G family member 31 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; molecular function: transporter activity (GO:0005215);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra038726","Bra038726",7.48892,481,8.360164,542,7.401391,440,0.177731,9,0,0,0,0,{"v":2.08757785348669e-14,"d":"2.09E-14"},-6.30322181305924,"down","[G]","Carbohydrate transport and metabolism","Biological Process: polysaccharide catabolic process (GO:0000272);; Molecular Function: chitinase activity (GO:0004568);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Biological Process: chitin catabolic process (GO:0006032);; Molecular Function: chitin binding (GO:0008061);; Molecular Function: endochitinase activity (GO:0008843);; Biological Process: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway (GO:0009871);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: beta-N-acetylglucosaminidase activity (GO:0016231);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Biological Process: response to chemical (GO:0042221);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Cellular Component: cell periphery (GO:0071944);; ","K20547|0|brp:103845514|K20547 basic endochitinase B [EC:3.2.1.14] | (RefSeq) endochitinase CH25-like","Amino sugar and nucleotide sugar metabolism (ko00520)","[R]","General function prediction only","Chitinase class I;; Chitin recognition protein","Endochitinase CH25 OS=Brassica napus OX=3708 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: endochitinase CH25-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra007742","Bra007742",2.615026,267,1.45128,150,1.826136,173,1.456103,106,0.378498,27,0.799575,56,0.00770030472786687,-1.58218900344232,"down","--","--","Biological Process: growth (GO:0040007);; Biological Process: single-organism cellular process (GO:0044763);; ","--","--","--","--","Domain of unknown function (DUF4378);; DUF761-associated sequence motif","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842131 [Brassica rapa]","biological process: growth (GO:0040007);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra012140","Bra012140",8.298847,305,6.090015,226,4.716342,160,17.748089,461,24.865652,621,23.787703,598,{"v":2.6222305424063e-05,"d":"2.62E-05"},1.2411400393254,"up","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of cell death (GO:0010941);; Biological Process: cellular response to heat (GO:0034605);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cellular response to freezing (GO:0071497);; Biological Process: regulation of pectin biosynthetic process (GO:1900030);; ","K09286|1.83923e-109|brp:103829530|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor ERF010","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF010 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: multi-organism process (GO:0051704)"]
["Bra000284","Bra000284",0.274398,26,0.790454,75,0.773621,67,12.99061,858,21.443289,1363,22.800705,1458,{"v":1.39830608751511e-16,"d":"1.40E-16"},4.15541114651186,"up","[E]","Amino acid transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: primary amine oxidase activity (GO:0008131);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plastid (GO:0009536);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: histone modification (GO:0016570);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: single-organism developmental process (GO:0044767);; Molecular Function: polyamine oxidase activity (GO:0046592);; Biological Process: system development (GO:0048731);; Biological Process: oxidation-reduction process (GO:0055114);; ","K17839|0|brp:103858041|K17839 polyamine oxidase [EC:1.5.3.17 1.5.3.-] | (RefSeq) probable polyamine oxidase 2","Arginine and proline metabolism (ko00330);; beta-Alanine metabolism (ko00410)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Flavin containing amine oxidoreductase;; NAD(P)-binding Rossmann-like domain;; FAD binding domain;; Pyridine nucleotide-disulphide oxidoreductase;; Pyridine nucleotide-disulphide oxidoreductase","Probable polyamine oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PAO2 PE=2 SV=1","S","Function unknown","PREDICTED: probable polyamine oxidase 2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502)"]
["Bra010351","Bra010351",1.980415,70,1.535788,55,2.321828,76,5.661374,140,7.360539,176,7.879,189,0.000649230653661666,1.2452116873966,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: glutathione-disulfide reductase activity (GO:0004362);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: electron transport chain (GO:0022900);; Biological Process: cell redox homeostasis (GO:0045454);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);; ","K03676|3.04975e-75|brp:103834744|K03676 glutaredoxin 3 | (RefSeq) glutaredoxin-C5, chloroplastic-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Glutaredoxin","Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutaredoxin-C5, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: electron carrier activity (GO:0009055);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra025818","Bra025818",3.080343,329,1.417593,149,2.269269,215,6.25729,468,6.877608,494,6.998992,494,0.00226106679113736,1.02581562990313,"up","[DPM]","Cell cycle control, cell division, chromosome partitioning;; Inorganic ion transport and metabolism;; Cell wall/membrane/envelope biogenesis","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Molecular Function: L-ascorbate oxidase activity (GO:0008447);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: cellulose metabolic process (GO:0030243);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: L-ascorbate oxidase homolog [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; cellular component: extracellular region (GO:0005576)"]
["Bra023449","Bra023449",5.456121,417,5.050689,397,5.594084,406,2.162544,111,1.130589,69,0.712949,37,{"v":6.19952883521003e-08,"d":"6.20E-08"},-2.46067776569307,"down","--","--","Molecular Function: peroxidase activity (GO:0004601);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: steroid biosynthetic process (GO:0006694);; Biological Process: iron ion transport (GO:0006826);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: heme binding (GO:0020037);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: alcohol biosynthetic process (GO:0046165);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00430|0|brp:103850917|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 55-like","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase;; Protein of unknown function (DUF3339)","Peroxidase 55 OS=Arabidopsis thaliana OX=3702 GN=PER55 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 55-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra004996","Bra004996",6.987516,651,10.515475,989,8.37918,722,2.473262,163,6.901837,438,5.804424,371,0.0080832539877546,-1.29010771351166,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: O-acyltransferase activity (GO:0008374);; Biological Process: epidermis development (GO:0008544);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: N-acyltransferase activity (GO:0016410);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism developmental process (GO:0044767);; Molecular Function: anthranilate N-benzoyltransferase activity (GO:0047672);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: response to stimulus (GO:0050896);; Biological Process: localization (GO:0051179);; Biological Process: response to karrikin (GO:0080167);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","Transferase family","Protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 OS=Arabidopsis thaliana OX=3702 GN=EPS1 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized acetyltransferase At3g50280 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179)"]
["Bra034423","Bra034423",1.615422,97,0.756167,45,0.558119,34,3.278108,135,6.490995,238,4.575833,176,0.00213999399857399,1.57415559398698,"up","[G]","Carbohydrate transport and metabolism","Biological Process: maltose metabolic process (GO:0000023);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: lipid transport (GO:0006869);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: oligosaccharide metabolic process (GO:0009311);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: lithium ion transport (GO:0010351);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: glycoside catabolic process (GO:0016139);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: glycosylceramide catabolic process (GO:0046477);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: raffinose alpha-galactosidase activity (GO:0052692);; ","--","--","[G]","Carbohydrate transport and metabolism","Alpha galactosidase A","Alpha-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=AGAL3 PE=1 SV=1","G","Carbohydrate transport and metabolism","BnaA05g18270D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824)"]
["Bra016621","Bra016621",0.509892,57,1.241611,130,1.179861,120,0.204377,17,0.086363,7,0.100699,9,{"v":4.06840330583928e-06,"d":"4.07E-06"},-3.05148539599289,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: binding (GO:0005488);; Biological Process: isoprenoid metabolic process (GO:0006720);; Molecular Function: steroid hydroxylase activity (GO:0008395);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: brassinosteroid homeostasis (GO:0010268);; Cellular Component: membrane (GO:0016020);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: developmental process (GO:0032502);; Biological Process: hormone biosynthetic process (GO:0042446);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism process (GO:0044699);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; ","K15638|0|brp:103835976|K15638 cytochrome P450 family 72 subfamily C polypeptide 1 | (RefSeq) cytochrome P450 72C1-like","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Cytochrome P450 72C1 OS=Arabidopsis thaliana OX=3702 GN=CYP72C1 PE=2 SV=2","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 72C1-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; biological process: developmental process (GO:0032502);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422)"]
["Bra000299","Bra000299",26.296038,373,57.195049,818,54.127842,710,15.143756,152,6.80519,66,7.160751,70,{"v":4.08681699320073e-07,"d":"4.09E-07"},-2.68092641569971,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to cadmium ion (GO:0046686);; ","K13448|6.90828e-44|brp:103858062|K13448 calcium-binding protein CML | (RefSeq) calmodulin-like protein 5","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain;; EF hand;; EF-hand domain pair;; EF-hand domain pair","Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calmodulin-like protein 5 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra030345","Bra030345",14.617504,1241,13.71855,1201,16.784972,1344,8.873289,560,4.746121,311,5.410508,344,{"v":1.49618077289298e-07,"d":"1.50E-07"},-1.67660738791687,"down","[JM]","Translation, ribosomal structure and biogenesis;; Cell wall/membrane/envelope biogenesis","Molecular Function: mannose-1-phosphate guanylyltransferase activity (GO:0004475);; Molecular Function: binding (GO:0005488);; Cellular Component: peroxisome (GO:0005777);; Biological Process: response to stress (GO:0006950);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: photorespiration (GO:0009853);; Molecular Function: nucleotidyltransferase activity (GO:0016779);; Biological Process: starch biosynthetic process (GO:0019252);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: monosaccharide biosynthetic process (GO:0046364);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K00966|0|brp:103864220|K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] | (RefSeq) mannose-1-phosphate guanyltransferase alpha","Fructose and mannose metabolism (ko00051);; Amino sugar and nucleotide sugar metabolism (ko00520)","[GMO]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis;; Posttranslational modification, protein turnover, chaperones","Nucleotidyl transferase;; Bacterial transferase hexapeptide (six repeats);; MobA-like NTP transferase domain","Mannose-1-phosphate guanylyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=CYT1 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: mannose-1-phosphate guanyltransferase alpha isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra009385","Bra009385",8.997353,557,4.205916,263,5.615527,322,16.490944,723,33.94408,1431,38.21817,1621,0.000137244552640312,1.65625997683439,"up","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: pattern specification process (GO:0007389);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: flower development (GO:0009908);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: regulation of biological quality (GO:0065008);; ","--","--","--","--","--","Transcription factor bHLH143 OS=Arabidopsis thaliana OX=3702 GN=BHLH143 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH143 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra004798","Bra004798",5.887014,232,11.029759,439,9.634889,352,2.964431,83,1.264153,34,2.668186,73,{"v":2.80195995495221e-06,"d":"2.80E-06"},-2.39865764889679,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","Late embryogenesis abundant protein","Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: late embryogenesis abundant protein At1g64065 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra020731","Bra020731",147.806864,14322,385.418473,37662,375.583034,33641,125.193166,8578,66.506964,4394,62.522794,4155,{"v":5.61748377755727e-06,"d":"5.62E-06"},-2.31777903085748,"down","[E]","Amino acid transport and metabolism","Molecular Function: 1-pyrroline-5-carboxylate dehydrogenase activity (GO:0003842);; Molecular Function: proline dehydrogenase activity (GO:0004657);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: glutamate biosynthetic process (GO:0006537);; Biological Process: proline catabolic process (GO:0006562);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00318|0|brp:103854501|K00318 proline dehydrogenase [EC:1.5.-.-] | (RefSeq) proline dehydrogenase 1, mitochondrial","Arginine and proline metabolism (ko00330)","[E]","Amino acid transport and metabolism","Proline dehydrogenase","Proline dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=POX1 PE=1 SV=2","E","Amino acid transport and metabolism","proline dehydrogenase 1, mitochondrial [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra038454","Bra038454",2.47314,166,2.516548,134,2.47214,134,0,0,0,0,0,0,{"v":1.12328157192228e-16,"d":"1.12E-16"},-7.49613949030827,"down","--","--","--","--","--","--","--","--","F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1","L","Replication, recombination and repair","BnaA05g34450D [Brassica napus]","--"]
["Bra026335","Bra026335",8.89769,754,22.597471,1955,19.456118,1534,10.877117,710,5.108312,391,8.535426,520,0.00412803743324456,-1.42600400805546,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: adenosine kinase activity (GO:0004001);; Molecular Function: ribokinase activity (GO:0004747);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: D-ribose metabolic process (GO:0006014);; Biological Process: AMP biosynthetic process (GO:0006167);; Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosynthesis (GO:0015979);; Biological Process: phosphorylation (GO:0016310);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: transcription from plastid promoter (GO:0042793);; ","--","--","[G]","Carbohydrate transport and metabolism","pfkB family carbohydrate kinase","Adenosine kinase OS=Physcomitrella patens subsp. patens OX=3218 GN=ADK PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: uncharacterized protein LOC103867304 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra007714","Bra007714",0.302287,7,0,0,0,0,8.444028,120,15.035806,205,14.076545,193,{"v":2.54104060710032e-09,"d":"2.54E-09"},5.21703394198001,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: arsenate reductase (glutaredoxin) activity (GO:0008794);; Molecular Function: electron carrier activity (GO:0009055);; Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; Biological Process: cell redox homeostasis (GO:0045454);; Biological Process: anther development (GO:0048653);; ","K03676|8.65277e-69|brp:103842097|K03676 glutaredoxin 3 | (RefSeq) monothiol glutaredoxin-S6","--","[O]","Posttranslational modification, protein turnover, chaperones","Glutaredoxin","Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana OX=3702 GN=GRXS6 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: monothiol glutaredoxin-S6 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra028181","Bra028181",0.141028,4,0.103153,3,0.289277,11,16.194699,370,56.36276,1242,48.080673,1059,{"v":2.23165225336652e-23,"d":"2.23E-23"},6.51077661921796,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: monooxygenase activity (GO:0004497);; Cellular Component: cell wall (GO:0005618);; Cellular Component: chloroplast ribulose bisphosphate carboxylase complex (GO:0009573);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to blue light (GO:0009637);; Biological Process: photorespiration (GO:0009853);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to red light (GO:0010114);; Biological Process: response to far red light (GO:0010218);; Cellular Component: membrane (GO:0016020);; Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984);; Biological Process: reductive pentose-phosphate cycle (GO:0019253);; Cellular Component: cytosolic ribosome (GO:0022626);; Cellular Component: apoplast (GO:0048046);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: chloroplast ribulose bisphosphate carboxylase complex biogenesis (GO:0080158);; ","K01602|7.64199e-120|bna:106444894|K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] | (RefSeq) rbcS; ribulose bisphosphate carboxylase small chain, chloroplastic","Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)","--","--","Ribulose bisphosphate carboxylase, small chain;; Ribulose-1,5-bisphosphate carboxylase small subunit","Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus OX=3708 GN=RBCS PE=2 SV=2","C","Energy production and conversion","ribulose bisphosphate carboxylase small chain, chloroplastic [Brassica napus] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: extracellular region (GO:0005576);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra017518","Bra017518",22.309317,567,57.58754,1477,57.947174,1363,0,0,0,0,0,0,{"v":3.66971436619105e-31,"d":"3.67E-31"},-9.79601868403867,"down","--","--","--","--","--","--","--","Hydrophobic seed protein;; Protease inhibitor/seed storage/LTP family;; Probable lipid transfer","pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: 14 kDa proline-rich protein DC2.15-like [Brassica oleracea var. oleracea] ","--"]
["Bra001769","Bra001769",16.991881,1496,28.074046,2539,22.851603,1926,6.361924,447,2.925095,262,1.350442,115,{"v":1.14351627809971e-07,"d":"1.14E-07"},-2.79171805176321,"down","--","--","Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","[S]","Function unknown","Eukaryotic protein of unknown function (DUF829)","--","S","Function unknown","PREDICTED: transmembrane protein 53-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra038816","Bra038816",123.554056,12536,102.794549,10450,102.48838,9646,55.737652,3947,34.013576,2414,25.725185,2323,{"v":2.70361442188933e-13,"d":"2.70E-13"},-1.93335674531816,"down","--","--","Molecular Function: NAD+ kinase activity (GO:0003951);; Molecular Function: diacylglycerol kinase activity (GO:0004143);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: protein kinase C-activating G-protein coupled receptor signaling pathway (GO:0007205);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: phosphorylation (GO:0016310);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: root development (GO:0048364);; Biological Process: leaf development (GO:0048366);; ","K00901|0|brp:103828372|K00901 diacylglycerol kinase (ATP) [EC:2.7.1.107] | (RefSeq) diacylglycerol kinase 3","Glycerolipid metabolism (ko00561);; Glycerophospholipid metabolism (ko00564);; Phosphatidylinositol signaling system (ko04070)","[IT]","Lipid transport and metabolism;; Signal transduction mechanisms","Diacylglycerol kinase accessory domain;; Diacylglycerol kinase catalytic domain","Diacylglycerol kinase 3 OS=Arabidopsis thaliana OX=3702 GN=DGK3 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: diacylglycerol kinase 3 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra000132","Bra000132",64.684198,7954,91.445409,11345,86.633787,9964,36.074483,3159,26.929525,2234,29.736401,2531,{"v":1.07345228586994e-11,"d":"1.07E-11"},-1.93153028979599,"down","[I]","Lipid transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: metabolic process (GO:0008152);; Molecular Function: hydrolase activity (GO:0016787);; ","K01054|0|brp:103857865|K01054 acylglycerol lipase [EC:3.1.1.23] | (RefSeq) caffeoylshikimate esterase-like","--","[I]","Lipid transport and metabolism","Serine aminopeptidase, S33;; alpha/beta hydrolase fold;; Alpha/beta hydrolase family;; Prolyl oligopeptidase family","Caffeoylshikimate esterase OS=Arabidopsis thaliana OX=3702 GN=CSE PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: caffeoylshikimate esterase-like [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra003474","Bra003474",5.032335,653,5.985213,783,5.714699,686,3.12002,287,4.27674,378,3.345775,298,{"v":9.58478001124862e-06,"d":"9.58E-06"},-1.1857853559284,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","[S]","Function unknown","Uncharacterized conserved protein (DUF2043)","UV-stimulated scaffold protein A homolog OS=Arabidopsis thaliana OX=3702 GN=At3g61800 PE=3 SV=1","S","Function unknown","PREDICTED: UV-stimulated scaffold protein A homolog [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra032931","Bra032931",5.166611,724,4.866021,688,4.919428,638,13.970073,1385,21.904369,2090,19.890144,1910,{"v":7.05154259309106e-08,"d":"7.05E-08"},1.331112356594,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: oligosaccharide metabolic process (GO:0009311);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: glycoside catabolic process (GO:0016139);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: glycosylceramide catabolic process (GO:0046477);; Molecular Function: raffinose alpha-galactosidase activity (GO:0052692);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[G]","Carbohydrate transport and metabolism","Plant specific eukaryotic initiation factor 4B;; Alpha galactosidase A","Alpha-galactosidase OS=Coffea arabica OX=13443 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable alpha-galactosidase B isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987)"]
["Bra036105","Bra036105",0.222411,29,0.011233,3,0.061267,11,1.419293,178,2.033647,196,2.742401,261,{"v":1.69602195124831e-07,"d":"1.70E-07"},3.56183879758308,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Frigida-like protein","FRIGIDA-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=FRL5 PE=2 SV=1","S","Function unknown","PREDICTED: FRIGIDA-like protein 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra003220","Bra003220",14.198206,1830,8.425962,1112,11.827116,1116,5.109918,473,2.831644,197,3.127615,219,{"v":2.2869042038099e-07,"d":"2.29E-07"},-2.15724557188315,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: nucleus (GO:0005634);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: response to stress (GO:0006950);; Biological Process: metabolic process (GO:0008152);; Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: cytokinin metabolic process (GO:0009690);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Molecular Function: cytokinin 7-beta-glucosyltransferase activity (GO:0047807);; Biological Process: seed development (GO:0048316);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: cytokinin 9-beta-glucosyltransferase activity (GO:0080062);; Biological Process: regulation of anthocyanin catabolic process (GO:1900000);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","Protein of unknown function (DUF620);; UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 76F1 OS=Arabidopsis thaliana OX=3702 GN=UGT76F1 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 76F1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra005432","Bra005432",11.136952,1186,2.253721,275,1.821973,223,30.302646,2438,35.057327,2686,39.171863,3026,0.000196552067703451,2.18515272945432,"up","[V]","Defense mechanisms","--","K03327|0|brp:103867462|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 15","--","[R]","General function prediction only","MatE;; Polysaccharide biosynthesis C-terminal domain","Protein DETOXIFICATION 15 OS=Arabidopsis thaliana OX=3702 GN=DTX15 PE=3 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 15 [Brassica rapa]","--"]
["Bra000230","Bra000230",43.75109,2405,38.060929,2112,44.071406,2233,107.28296,4167,153.945379,5754,180.866821,6132,{"v":5.62338356509285e-07,"d":"5.62E-07"},1.18810544379242,"up","[V]","Defense mechanisms","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: S-formylglutathione hydrolase activity (GO:0018738);; Biological Process: formaldehyde catabolic process (GO:0046294);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; ","K01070|0|brp:103857985|K01070 S-formylglutathione hydrolase [EC:3.1.2.12] | (RefSeq) S-formylglutathione hydrolase","Carbon metabolism (ko01200)","[R]","General function prediction only","Putative esterase;; Prolyl oligopeptidase family;; Dienelactone hydrolase family","S-formylglutathione hydrolase OS=Arabidopsis thaliana OX=3702 GN=SFGH PE=1 SV=2","S","Function unknown","PREDICTED: S-formylglutathione hydrolase [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576)"]
["Bra022997","Bra022997",24.010477,4230,40.318649,7168,44.93277,7323,5.18231,646,1.575837,190,1.655114,200,{"v":2.29171849411865e-13,"d":"2.29E-13"},-4.03551801660126,"down","[K]","Transcription","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: defense response (GO:0006952);; Biological Process: organelle organization (GO:0006996);; Biological Process: signal transduction (GO:0007165);; Biological Process: pattern specification process (GO:0007389);; Biological Process: epidermis development (GO:0008544);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: embryo development (GO:0009790);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: seed maturation (GO:0010431);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Biological Process: phosphorylation (GO:0016310);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular component morphogenesis (GO:0032989);; Biological Process: response to lipid (GO:0033993);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: single-organism transport (GO:0044765);; Biological Process: meristem development (GO:0048507);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: anther development (GO:0048653);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cell wall organization (GO:0071555);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: response to alcohol (GO:0097305);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2","S","Function unknown","PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; biological process: growth (GO:0040007);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179)"]
["Bra013234","Bra013234",0.532153,59,0.916799,116,0.705721,77,9.182215,693,7.328153,544,7.556927,592,{"v":5.38877797966549e-13,"d":"5.39E-13"},2.71541450066932,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: plant-type vacuole (GO:0000325);; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);; Biological Process: response to karrikin (GO:0080167);; ","K01188|0|eus:EUTSA_v10002493mg|K01188 beta-glucosidase [EC:3.2.1.21] | (RefSeq) hypothetical protein","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGLU3 PE=3 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: beta-glucosidase 3-like [Raphanus sativus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020)"]
["Bra038333","Bra038333",1.841387,221,1.48044,179,1.477359,164,4.090105,347,5.218984,426,5.593136,459,{"v":8.60545920074037e-06,"d":"8.61E-06"},1.07708372968129,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At1g68980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g68980 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At1g68980, mitochondrial [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra033432","Bra033432",15.454271,2100,10.735041,1472,10.519007,1313,3.207544,304,5.359252,486,5.049149,462,{"v":3.10465385537766e-12,"d":"3.10E-12"},-1.96321250611956,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Biological Process: defense response to insect (GO:0002213);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: aerenchyma formation (GO:0010618);; Biological Process: positive regulation of cell death (GO:0010942);; Molecular Function: lipase activity (GO:0016298);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","--","Lipase-like PAD4 OS=Arabidopsis thaliana OX=3702 GN=PAD4 PE=1 SV=1","--","--","BnaA04g05430D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824)"]
["Bra031250","Bra031250",2.368186,321,1.253132,163,1.094943,154,3.945544,422,4.93989,488,5.324739,507,0.000912894488250844,1.11842233756545,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=At5g12440 PE=2 SV=3","S","Function unknown","PREDICTED: zinc finger CCCH domain-containing protein 55 isoform X4 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra032222","Bra032222",111.089363,1811,191.228851,3145,169.74884,2560,36.993446,427,28.033222,312,20.595278,230,{"v":7.66937230956303e-15,"d":"7.67E-15"},-2.95857752497314,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","BnaA05g17740D [Brassica napus]","--"]
["Bra017143","Bra017143",66.13023,9816,54.172671,8092,50.426016,6950,41.731523,4389,22.47537,2276,21.919234,2248,{"v":5.75384434112178e-06,"d":"5.75E-06"},-1.49645804580942,"down","--","--","--","K12349|0|brp:103865645|K12349 neutral ceramidase [EC:3.5.1.23] | (RefSeq) neutral ceramidase-like","Sphingolipid metabolism (ko00600)","[T]","Signal transduction mechanisms","Neutral/alkaline non-lysosomal ceramidase, N-terminal;; Neutral/alkaline non-lysosomal ceramidase, C-terminal","Neutral ceramidase 2 OS=Arabidopsis thaliana OX=3702 GN=NCER2 PE=3 SV=1","S","Function unknown","PREDICTED: neutral ceramidase-like [Brassica rapa]","--"]
["Bra019880","Bra019880",0.527422,51,0.480426,48,0.417128,37,1.17881,80,1.713449,112,2.201439,146,0.00547300294923122,1.23370640468384,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","BnaC05g08490D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra008232","Bra008232",0.754151,70,3.062548,285,2.012811,172,0.619521,41,0.087392,6,0.015655,1,0.00506895307288492,-2.84221711495359,"down","[IQ]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: acetate-CoA ligase activity (GO:0003987);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Biological Process: acetate metabolic process (GO:0006083);; Biological Process: glyoxylate cycle (GO:0006097);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Molecular Function: o-succinylbenzoate-CoA ligase activity (GO:0008756);; Cellular Component: chloroplast (GO:0009507);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: chlorophyll catabolic process (GO:0015996);; Molecular Function: benzoate-CoA ligase activity (GO:0018858);; Biological Process: butyrate metabolic process (GO:0019605);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: purine ribonucleoside binding (GO:0032550);; Molecular Function: adenyl ribonucleotide binding (GO:0032559);; Molecular Function: anion binding (GO:0043168);; Molecular Function: butyrate-CoA ligase activity (GO:0047760);; ","--","--","[I]","Lipid transport and metabolism","AMP-binding enzyme;; AMP-binding enzyme C-terminal domain","Probable acyl-activating enzyme 5, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE5 PE=1 SV=1","IQ","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: probable acyl-activating enzyme 5, peroxisomal [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra015757","Bra015757",21.898141,2441,76.781908,8629,74.904396,7710,2.829731,219,1.681658,129,1.399125,108,{"v":6.71266847353302e-21,"d":"6.71E-21"},-5.16617609837334,"down","[R]","General function prediction only","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: amino acid transport (GO:0006865);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cuticle development (GO:0042335);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: cell wall organization (GO:0071555);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; ","K04733|0|brp:103832093|K04733 interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase NAK","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: probable serine/threonine-protein kinase NAK [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra035599","Bra035599",14.736345,2496,19.325146,3159,11.126809,1757,38.067433,4336,54.7969,6244,49.435297,5683,0.000498412231195473,1.0738366055397,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose metabolic process (GO:0006006);; Biological Process: protein folding (GO:0006457);; Biological Process: protein secretion (GO:0009306);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to salt stress (GO:0009651);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: defense response signaling pathway, resistance gene-dependent (GO:0009870);; Biological Process: flower development (GO:0009908);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: heat acclimation (GO:0010286);; Cellular Component: membrane (GO:0016020);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: leaf development (GO:0048366);; Biological Process: shoot system development (GO:0048367);; Biological Process: protein stabilization (GO:0050821);; Molecular Function: unfolded protein binding (GO:0051082);; Biological Process: cellular response to calcium ion (GO:0071277);; Cellular Component: cell periphery (GO:0071944);; Biological Process: stomatal closure (GO:0090332);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K04079|0|bna:106389639|K04079 molecular chaperone HtpG | (RefSeq) heat shock protein 90-2-like","Protein processing in endoplasmic reticulum (ko04141);; Plant-pathogen interaction (ko04626)","[O]","Posttranslational modification, protein turnover, chaperones","Hsp90 protein;; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase","Heat shock protein 90-4 OS=Arabidopsis thaliana OX=3702 GN=HSP90-4 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","Heat shock protein 83 [Triticum urartu]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576)"]
["Bra031103","Bra031103",22.49284,1720,17.872931,1379,17.143297,1213,13.417171,726,7.324812,382,8.598611,451,{"v":1.41530159372145e-06,"d":"1.42E-06"},-1.4865544138227,"down","[K]","Transcription","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: signal transduction (GO:0007165);; Biological Process: pattern specification process (GO:0007389);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: cell tip growth (GO:0009932);; Biological Process: meristem initiation (GO:0010014);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: anther wall tapetum cell fate specification (GO:0010234);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: cell cycle process (GO:0022402);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single-organism transport (GO:0044765);; Biological Process: leaf development (GO:0048366);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: chromosome organization (GO:0051276);; Biological Process: cell division (GO:0051301);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: cell wall organization (GO:0071555);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: regulation of seed maturation (GO:2000034);; ","--","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=LRX4 PE=1 SV=1","S","Function unknown","PREDICTED: leucine-rich repeat extensin-like protein 6 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179)"]
["Bra018769","Bra018769",1.884628,133,6.01469,428,7.969946,512,3.093463,157,1.14676,65,1.412922,73,0.00726308285596196,-1.83235214700186,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasmodesma (GO:0009506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[S]","Function unknown","2OG-Fe(II) oxygenase superfamily","--","L","Replication, recombination and repair","PREDICTED: uncharacterized protein LOC103871430 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra033568","Bra033568",101.643346,8165,172.360809,14022,165.837813,12352,36.083693,2099,36.356099,1990,36.591912,2025,{"v":1.04175498147224e-15,"d":"1.04E-15"},-2.53388317274676,"down","[HC]","Coenzyme transport and metabolism;; Energy production and conversion","Molecular Function: monooxygenase activity (GO:0004497);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to stress (GO:0006950);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: innate immune response (GO:0045087);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[CR]","Energy production and conversion;; General function prediction only","FAD binding domain;; Lycopene cyclase protein;; FAD dependent oxidoreductase;; FAD binding domain;; NAD(P)-binding Rossmann-like domain","Monooxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=MO2 PE=2 SV=1","CH","Energy production and conversion;; Coenzyme transport and metabolism","PREDICTED: uncharacterized protein LOC103828095 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376)"]
["Bra036588","Bra036588",5.186468,347,4.051665,279,8.697896,543,1.698561,92,0.853185,38,1.089676,55,{"v":2.55227478055822e-07,"d":"2.55E-07"},-2.62154935505151,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: defense response (GO:0006952);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of secondary cell wall biogenesis (GO:2000652);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103837136|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB86-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor MYB86-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra025699","Bra025699",1.924088,211,1.517389,178,2.347901,252,8.876348,611,9.06191,615,12.566831,800,{"v":2.37076777476703e-07,"d":"2.37E-07"},1.57106484944525,"up","--","--","Biological Process: cytokinesis (GO:0000910);; Cellular Component: nucleus (GO:0005634);; Biological Process: microtubule-based process (GO:0007017);; ","K15075|2.26286e-47|bna:106429023|K15075 DNA repair/transcription protein MET18/MMS19 | (RefSeq) MMS19 nucleotide excision repair protein homolog","--","[LK]","Replication, recombination and repair;; Transcription","Dos2-interacting transcription regulator of RNA-Pol-II","MMS19 nucleotide excision repair protein homolog OS=Arabidopsis thaliana OX=3702 GN=MMS19 PE=1 SV=1","S","Function unknown","BnaA06g13110D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra006956","Bra006956",0.445789,22,0.508215,30,0.314642,22,2.421141,117,2.400483,108,1.815773,92,{"v":1.99340431643616e-06,"d":"1.99E-06"},1.9801163020514,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA repair (GO:0006281);; Biological Process: DNA recombination (GO:0006310);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818);; Biological Process: response to deep water (GO:0030912);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: chloroplast part (GO:0044434);; Molecular Function: protein phosphorylated amino acid binding (GO:0045309);; Biological Process: root development (GO:0048364);; Biological Process: leaf development (GO:0048366);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: regulation of nematode larval development (GO:0061062);; ","--","--","--","--","WRC;; QLQ","Growth-regulating factor 4 OS=Arabidopsis thaliana OX=3702 GN=GRF4 PE=1 SV=1","K","Transcription","PREDICTED: growth-regulating factor 4-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra032616","Bra032616",22.863748,2027,27.771352,2520,26.710578,2193,19.334568,1168,12.180493,725,16.87097,907,{"v":3.7180384112375e-06,"d":"3.72E-06"},-1.31631301746836,"down","[CP]","Energy production and conversion;; Inorganic ion transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Molecular Function: inorganic diphosphatase activity (GO:0004427);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Biological Process: signal transduction (GO:0007165);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Biological Process: lipid storage (GO:0019915);; Molecular Function: polysaccharide binding (GO:0030247);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: innate immune response (GO:0045087);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: response to other organism (GO:0051707);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K01507|1.02518e-145|brp:103843767|K01507 inorganic pyrophosphatase [EC:3.6.1.1] | (RefSeq) soluble inorganic pyrophosphatase 1","Oxidative phosphorylation (ko00190)","[C]","Energy production and conversion","Inorganic pyrophosphatase","Soluble inorganic pyrophosphatase 1 OS=Arabidopsis thaliana OX=3702 GN=PPA1 PE=1 SV=1","C","Energy production and conversion","PREDICTED: soluble inorganic pyrophosphatase 1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra024097","Bra024097",31.993419,4502,17.555508,2493,28.906727,3763,17.005091,1693,12.874363,1234,10.540935,1015,{"v":5.04492321515273e-06,"d":"5.04E-06"},-1.46837285170629,"down","--","--","Cellular Component: chromatin silencing complex (GO:0005677);; Biological Process: cell adhesion (GO:0007155);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: negative regulation of gene expression (GO:0010629);; Biological Process: protein desumoylation (GO:0016926);; Cellular Component: PcG protein complex (GO:0031519);; Biological Process: circadian regulation of gene expression (GO:0032922);; Molecular Function: methylated histone binding (GO:0035064);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: actin nucleation (GO:0045010);; Biological Process: regulation of short-day photoperiodism, flowering (GO:0048587);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Biological Process: cellular response to cold (GO:0070417);; Biological Process: cell wall organization (GO:0071555);; Biological Process: positive regulation of histone H3-K9 dimethylation (GO:1900111);; ","--","--","--","--","PHD - plant homeodomain finger protein;; Fibronectin type III domain","VIN3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=VIL2 PE=1 SV=1","S","Function unknown","PREDICTED: VIN3-like protein 2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological adhesion (GO:0022610);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: rhythmic process (GO:0048511);; molecular function: binding (GO:0005488)"]
["Bra007915","Bra007915",0.68927,76,0.897767,104,0.870433,100,0.195135,15,0.175259,14,0,0,0.0037402686340876,-2.76383168318172,"down","--",null,"Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: seed germination (GO:0009845);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: cuticle development (GO:0042335);; Biological Process: cell wall modification (GO:0042545);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: animal organ formation (GO:0048645);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: root hair elongation (GO:0048767);; Biological Process: pollen tube development (GO:0048868);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to misfolded protein (GO:0051788);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Proline-rich receptor-like protein kinase PERK13 OS=Arabidopsis thaliana OX=3702 GN=PERK13 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: proline-rich receptor-like protein kinase PERK13 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra026029","Bra026029",1.439224,179,1.218564,149,1.160121,133,5.694117,486,7.711342,633,8.607267,709,{"v":1.2629427924355e-13,"d":"1.26E-13"},1.92503442381399,"up","[R]","General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translational initiation (GO:0006413);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: protein autophosphorylation (GO:0046777);; Cellular Component: apoplast (GO:0048046);; ","--","--","[G]","Carbohydrate transport and metabolism","NAD(P)H-binding;; NmrA-like family;; Complex I intermediate-associated protein 30 (CIA30);; NAD dependent epimerase/dehydratase family","Uncharacterized protein At5g02240 OS=Arabidopsis thaliana OX=3702 GN=At5g02240 PE=1 SV=1","GM","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis","PREDICTED: uncharacterized protein LOC103872461 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576)"]
["Bra038749","Bra038749",5.174805,658,12.205797,1635,11.10745,1393,2.535045,192,1.960176,143,0.316067,33,{"v":1.9467911084262e-06,"d":"1.95E-06"},-3.15278912638595,"down","[V]","Defense mechanisms","Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: response to chitin (GO:0010200);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Biological Process: proline transport (GO:0015824);; ","K03327|0|brp:103861257|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 39-like","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 39 OS=Arabidopsis thaliana OX=3702 GN=DTX39 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 39-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215)"]
["Bra003587","Bra003587",2.555731,352,12.760196,1547,13.970422,1527,0.34556,33,0.188395,20,0.212058,22,{"v":6.84028271937895e-17,"d":"6.84E-17"},-5.21464094437974,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: iron ion transmembrane transporter activity (GO:0005381);; Molecular Function: manganese ion transmembrane transporter activity (GO:0005384);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular metal ion homeostasis (GO:0006875);; Biological Process: cellular iron ion homeostasis (GO:0006879);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to ethylene (GO:0009723);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: response to iron ion (GO:0010039);; Biological Process: response to aluminum ion (GO:0010044);; Molecular Function: aluminum ion transmembrane transporter activity (GO:0015083);; Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);; Molecular Function: inorganic anion transmembrane transporter activity (GO:0015103);; Biological Process: aluminum cation transport (GO:0015690);; Biological Process: lead ion transport (GO:0015692);; Biological Process: inorganic anion transport (GO:0015698);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: iron ion transmembrane transport (GO:0034755);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: system development (GO:0048731);; Biological Process: cellular localization (GO:0051641);; Biological Process: manganese ion homeostasis (GO:0055071);; Biological Process: cadmium ion transmembrane transport (GO:0070574);; Biological Process: manganese ion transmembrane transport (GO:0071421);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: positive regulation of reactive oxygen species metabolic process (GO:2000379);; ","--","--","[P]","Inorganic ion transport and metabolism","Natural resistance-associated macrophage protein","Metal transporter Nramp1 OS=Arabidopsis thaliana OX=3702 GN=NRAMP1 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: metal transporter Nramp1-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; cellular component: membrane part (GO:0044425);; biological process: developmental process (GO:0032502)"]
["Bra030040","Bra030040",4.862382,457,2.496699,294,4.012035,342,7.251095,635,13.339258,818,18.08043,1056,0.000229535051585371,1.14489895184398,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: leaf shaping (GO:0010358);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of biological process (GO:0050789);; ","--","--","--","--","SBP domain","Squamosa promoter-binding-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=SPL11 PE=2 SV=2","K","Transcription","PREDICTED: squamosa promoter-binding-like protein 11 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra000147","Bra000147",3.40213,298,2.311378,263,2.088165,231,5.345416,379,9.937551,631,10.917941,676,0.00210873395390687,1.03088598602584,"up","--","--","Biological Process: nuclear-transcribed mRNA catabolic process (GO:0000956);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of protein ubiquitination (GO:0031396);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: cellular response to salt stress (GO:0071472);; ","K10523|0|brp:103857880|K10523 speckle-type POZ protein | (RefSeq) BTB/POZ and MATH domain-containing protein 3-like","--","[DR]","Cell cycle control, cell division, chromosome partitioning;; General function prediction only","BTB/POZ domain;; MATH domain","BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1","S","Function unknown","PREDICTED: BTB/POZ and MATH domain-containing protein 3-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)"]
["Bra012641","Bra012641",5.436984,475,16.30512,1540,17.309086,1400,2.386299,172,0.312701,27,1.108085,69,{"v":1.62552504559159e-06,"d":"1.63E-06"},-3.43108904069962,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103860942|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB39","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB39 OS=Arabidopsis thaliana OX=3702 GN=MYB39 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor MYB39 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra020400","Bra020400",31.378357,5903,42.877753,8426,35.961724,6253,28.694838,4006,12.75906,1625,11.978804,1554,0.000845586139229352,-1.53540018855624,"down","--","--","Molecular Function: cysteine-type peptidase activity (GO:0008234);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Biological Process: response to salt stress (GO:0009651);; Biological Process: flower development (GO:0009908);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular part (GO:0044424);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: seed development (GO:0048316);; Biological Process: leaf development (GO:0048366);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: organic substance catabolic process (GO:1901575);; ","K11855|0|bna:106388485|K11855 ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin carboxyl-terminal hydrolase;; Ubiquitin carboxyl-terminal hydrolase","Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana OX=3702 GN=UBP23 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","BnaA02g07970D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra028775","Bra028775",8.118197,1034,30.865239,3983,32.038774,3804,2.04121,183,1.048945,94,1.061846,94,{"v":8.07122035277086e-14,"d":"8.07E-14"},-4.38952202436489,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to hormone (GO:0009725);; Biological Process: dephosphorylation (GO:0016311);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: inositol trisphosphate metabolic process (GO:0032957);; Molecular Function: phosphatidylinositol bisphosphate phosphatase activity (GO:0034593);; Molecular Function: phosphatidylinositol phosphate 5-phosphatase activity (GO:0034595);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: inositol phosphate dephosphorylation (GO:0046855);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Endonuclease/Exonuclease/phosphatase family;; Centromere protein B dimerisation domain","Type I inositol polyphosphate 5-phosphatase 10 OS=Arabidopsis thaliana OX=3702 GN=IP5P10 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: type I inositol polyphosphate 5-phosphatase 10 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502)"]
["Bra010367","Bra010367",34.385036,487,106.611404,1524,81.883087,1073,22.284708,224,14.072746,136,17.823551,173,{"v":1.35864353344808e-06,"d":"1.36E-06"},-2.50743449081154,"down","--","--","Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103834760 [Brassica rapa] ","cellular component: extracellular region (GO:0005576)"]
["Bra030116","Bra030116",11.64077,944,9.681528,807,10.324254,829,6.282729,349,5.734056,305,5.348338,319,{"v":5.77912627425207e-19,"d":"5.78E-19"},-1.45052371237176,"down","--","--","--","--","--","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; PMR5 N terminal Domain","Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 PE=2 SV=1","S","Function unknown","PREDICTED: protein trichome birefringence-like 38 [Brassica rapa] ","--"]
["Bra016301","Bra016301",5.372088,466,12.857259,1278,11.744415,1070,4.60347,281,2.805507,183,3.049779,186,{"v":2.60299203071986e-05,"d":"2.60E-05"},-2.1191110440471,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: chloroplast (GO:0009507);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PBL4 OS=Arabidopsis thaliana OX=3702 GN=PBL4 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: protein kinase 2B, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra008004","Bra008004",1.793016,215,1.321381,163,1.98662,234,5.335691,478,6.001124,506,9.095697,793,{"v":6.13097098847985e-05,"d":"6.13E-05"},1.44790018443053,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular protein modification process (GO:0006464);; Molecular Function: 5S rRNA binding (GO:0008097);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Molecular Function: 5S rDNA binding (GO:0080084);; Biological Process: regulation of primary metabolic process (GO:0080090);; ","K09191|0|brp:103852749|K09191 general transcription factor IIIA | (RefSeq) transcription factor IIIA","--","[R]","General function prediction only","Zinc finger, C2H2 type;; C2H2-type zinc finger","Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1","S","Function unknown","PREDICTED: transcription factor IIIA [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699)"]
["Bra033427","Bra033427",0.971121,167,1.23084,204,1.063427,165,6.083337,709,6.504074,708,5.983097,669,{"v":5.52604476680666e-17,"d":"5.53E-17"},1.88569112519173,"up","[O]","Posttranslational modification, protein turnover, chaperones","Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to heat (GO:0009408);; Cellular Component: chloroplast (GO:0009507);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Clp amino terminal domain, pathogenicity island component","Protein SMAX1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=SMXL3 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: protein SMAX1-LIKE 3-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra007346","Bra007346",0.263326,22,0.0271,4,0.100198,9,2.34969,159,5.53456,295,4.589019,270,{"v":2.20382007855014e-11,"d":"2.20E-11"},4.07088213218971,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: tissue development (GO:0009888);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: transmitting tissue development (GO:0010500);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: root development (GO:0048364);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[R]","General function prediction only","--","Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: zinc finger protein WIP2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501)"]
["Bra022154","Bra022154",2.060913,155,7.901342,598,8.90388,617,1.51901,81,0.352675,18,0.207853,11,{"v":6.56127688489791e-05,"d":"6.56E-05"},-3.28706246672094,"down","--","--","Molecular Function: phosphorelay sensor kinase activity (GO:0000155);; Biological Process: phosphorelay signal transduction system (GO:0000160);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: structural molecule activity (GO:0005198);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuole (GO:0005773);; Cellular Component: microtubule (GO:0005874);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: RNA processing (GO:0006396);; Biological Process: response to stress (GO:0006950);; Biological Process: microtubule-based movement (GO:0007018);; Biological Process: regulation of cell size (GO:0008361);; Cellular Component: plastid (GO:0009536);; Biological Process: phototropism (GO:0009638);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to sucrose (GO:0009744);; Biological Process: blue light signaling pathway (GO:0009785);; Molecular Function: blue light photoreceptor activity (GO:0009882);; Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);; Biological Process: chloroplast avoidance movement (GO:0009903);; Biological Process: chloroplast accumulation movement (GO:0009904);; Biological Process: positive gravitropism (GO:0009958);; Cellular Component: cell surface (GO:0009986);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of proton transport (GO:0010155);; Molecular Function: FMN binding (GO:0010181);; Biological Process: response to far red light (GO:0010218);; Biological Process: negative regulation of anion channel activity by blue light (GO:0010362);; Biological Process: ncRNA metabolic process (GO:0034660);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: stamen development (GO:0048443);; Biological Process: root hair initiation (GO:0048766);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cotyledon development (GO:0048825);; Biological Process: response to karrikin (GO:0080167);; Biological Process: regulation of auxin polar transport (GO:2000012);; ","--","--","--","--","--","Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana OX=3702 GN=D6PKL2 PE=1 SV=1","S","Function unknown","BnaA02g25690D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra026703","Bra026703",0.117228,5,0.074406,3,0.208199,8,4.806918,128,5.0057,129,4.042592,105,{"v":4.17529634930544e-14,"d":"4.18E-14"},4.17935377765623,"up","[T]","Signal transduction mechanisms","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: plastid (GO:0009536);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: red light signaling pathway (GO:0010161);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: interspecies interaction between organisms (GO:0044419);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Stage II sporulation protein E (SpoIIE)","Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana OX=3702 GN=At1g78200 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 17 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576)"]
["Bra003015","Bra003015",2.277945,140,1.404842,88,1.386623,85,4.220158,193,6.134558,242,5.933252,256,0.000605693549235297,1.09664578292427,"up","--","--","Molecular Function: structural molecule activity (GO:0005198);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: regulation of protein localization (GO:0032880);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","MSP (Major sperm protein) domain","Vesicle-associated protein 4-1 OS=Arabidopsis thaliana OX=3702 GN=PVA41 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: vesicle-associated protein 4-1-like [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra032790","Bra032790",27.873297,428,83.749931,1296,89.059135,1263,24.80224,269,30.746449,321,25.236853,266,0.000645790187831509,-1.81852755293222,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103839078 [Brassica rapa] ","--"]
["Bra039792","Bra039792",1.791243,118,1.760973,132,2.114433,113,0.210421,12,0.958144,42,0.892204,47,0.00472378933660779,-1.77071054872736,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103863409 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra035490","Bra035490",0.072646,4,0.230139,9,0.110833,6,3.843878,111,8.701538,271,5.965123,194,{"v":1.49487340828909e-13,"d":"1.49E-13"},4.51128349964166,"up","[C]","Energy production and conversion","Molecular Function: protein binding (GO:0005515);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: ferredoxin metabolic process (GO:0006124);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: electron transport chain (GO:0022900);; Biological Process: small molecule metabolic process (GO:0044281);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to karrikin (GO:0080167);; ","K02639|3.41282e-131|brp:103833653|K02639 ferredoxin | (RefSeq) ferredoxin-2-like","Photosynthesis (ko00195)","--","--","2Fe-2S iron-sulfur cluster binding domain","Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1","C","Energy production and conversion","PREDICTED: uncharacterized protein LOC103833653 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra025592","Bra025592",2.716388,189,4.106528,257,3.864055,211,10.209528,409,15.012662,605,14.421202,589,0.000355966738815072,1.20198597630882,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","Domain of unknown function (DUF588)","CASP-like protein 4A1 OS=Arabidopsis thaliana OX=3702 GN=At5g40300 PE=2 SV=1","S","Function unknown","PREDICTED: CASP-like protein 4A1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra012427","Bra012427",1.618221,332,7.757444,1643,7.569346,1452,0.651989,100,1.363193,207,1.196775,155,{"v":2.13713962410514e-05,"d":"2.14E-05"},-2.77478987980795,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; ","--","--","--","--","Domain of unknown function (DUF569);; Fascin domain","--","S","Function unknown","BnaA07g09180D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra038739","Bra038739",246.740067,7516,274.73465,8445,227.866028,6421,78.824036,1699,84.076805,1745,76.876144,1605,{"v":4.05482581053559e-37,"d":"4.05E-37"},-2.18844860715151,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Biological Process: glucose catabolic process (GO:0006007);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plastid (GO:0009536);; Biological Process: protein autoubiquitination (GO:0051865);; ","--","--","[R]","General function prediction only","AN1-like Zinc finger;; A20-like zinc finger","Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana OX=3702 GN=SAP5 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987)"]
["Bra011377","Bra011377",0.990097,97,0.552216,55,0.655598,60,2.074462,143,3.095949,206,3.662032,245,0.00047265423870409,1.42149959260165,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","--","--","--","--","uncharacterized protein LOC106354945 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra024284","Bra024284",129.66507,3145,74.37384,1821,105.779968,2374,47.147923,809,27.341761,452,24.737125,412,{"v":1.68611431072131e-09,"d":"1.69E-09"},-2.12873952985092,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to chitin (GO:0010200);; Cellular Component: membrane (GO:0016020);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","--","Classical arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=AGP1 PE=2 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: classical arabinogalactan protein 1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152)"]
["Bra004357","Bra004357",6.69858,636,10.552638,1019,11.177372,968,5.222266,357,0.911647,76,1.881941,134,0.000439821720929494,-2.1537577793094,"down","[OT]","Posttranslational modification, protein turnover, chaperones;; Signal transduction mechanisms","Biological Process: nuclear division (GO:0000280);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of cellular amino acid metabolic process (GO:0006521);; Biological Process: nucleolus organization (GO:0007000);; Cellular Component: chloroplast (GO:0009507);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: regulation of asymmetric cell division (GO:0009786);; Biological Process: seed germination (GO:0009845);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: meristem structural organization (GO:0009933);; Cellular Component: cell surface (GO:0009986);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: lateral root formation (GO:0010311);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: amino acid binding (GO:0016597);; Molecular Function: transmembrane receptor protein kinase activity (GO:0019199);; Biological Process: lipid storage (GO:0019915);; Cellular Component: endocytic vesicle (GO:0030139);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: cotyledon development (GO:0048825);; Biological Process: root cap development (GO:0048829);; Biological Process: response to freezing (GO:0050826);; ","--","--","--","--","ACT domain;; ACT domain;; ACT domain","ACT domain-containing protein ACR4 OS=Arabidopsis thaliana OX=3702 GN=ACR4 PE=2 SV=1","S","Function unknown","PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: signaling (GO:0023052);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; biological process: localization (GO:0051179)"]
["Bra004736","Bra004736",2.060388,113,3.957837,218,4.019748,203,12.100782,467,13.336754,496,12.121486,453,0.00196807378261605,1.28322373992821,"up","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: proline biosynthetic process (GO:0006561);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: flower development (GO:0009908);; Biological Process: camalexin biosynthetic process (GO:0010120);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","--","--","--","--","No apical meristem (NAM) protein","Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana OX=3702 GN=JUB1 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor JUNGBRUNNEN 1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra000550","Bra000550",3.177217,594,2.609728,477,2.822867,514,9.209783,1196,9.037465,1149,10.689008,1314,{"v":3.90324917496489e-12,"d":"3.90E-12"},1.15343360069322,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to hormone (GO:0009725);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: meristem initiation (GO:0010014);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: histone H3-K9 methylation (GO:0051567);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; ","K14558|0|brp:103858364|K14558 periodic tryptophan protein 2 | (RefSeq) topless-related protein 4","Ribosome biogenesis in eukaryotes (ko03008)","[R]","General function prediction only","Anaphase-promoting complex subunit 4 WD40 domain;; WD domain, G-beta repeat","Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2","S","Function unknown","PREDICTED: topless-related protein 4 isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: signaling (GO:0023052);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: macromolecular complex (GO:0032991)"]
["Bra011180","Bra011180",548.876172,30158,825.412354,49067,853.003967,46220,132.838595,5210,64.143397,2464,60.746337,2390,{"v":1.37965241203411e-17,"d":"1.38E-17"},-3.60789150463818,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: xylem development (GO:0010089);; Biological Process: response to chitin (GO:0010200);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Molecular Function: xyloglucan-specific endo-beta-1,4-glucanase activity (GO:0033946);; Biological Process: cell wall modification (GO:0042545);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: primary root development (GO:0080022);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0080039);; ","K08235|0|brp:103852780|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) probable xyloglucan endotransglucosylase/hydrolase protein 18","--","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana OX=3702 GN=XTH18 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 18 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra032284","Bra032284",11.106439,1691,15.62694,2461,14.79744,2128,4.100739,400,0.628541,70,0.435926,51,{"v":4.03201723546654e-06,"d":"4.03E-06"},-3.32621625365675,"down","[I]","Lipid transport and metabolism","Biological Process: long-chain fatty acid metabolic process (GO:0001676);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: long-chain fatty acid-CoA ligase activity (GO:0004467);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: plastid (GO:0009536);; Biological Process: response to wounding (GO:0009611);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: wax biosynthetic process (GO:0010025);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: cutin biosynthetic process (GO:0010143);; Biological Process: response to ozone (GO:0010193);; Biological Process: lateral root formation (GO:0010311);; Molecular Function: acid-thiol ligase activity (GO:0016878);; Molecular Function: very long-chain fatty acid-CoA ligase activity (GO:0031957);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: carboxylic acid catabolic process (GO:0046395);; Biological Process: defense response to fungus (GO:0050832);; ","K01897|0|brp:103868651|K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] | (RefSeq) long chain acyl-CoA synthetase 2","Fatty acid biosynthesis (ko00061);; Fatty acid degradation (ko00071);; Fatty acid metabolism (ko01212);; Peroxisome (ko04146)","[I]","Lipid transport and metabolism","AMP-binding enzyme;; AMP-binding enzyme C-terminal domain","Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana OX=3702 GN=LACS2 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: long chain acyl-CoA synthetase 2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra032728","Bra032728",1.597764,88,1.53443,97,1.062753,55,4.088218,158,4.924039,180,4.068772,168,0.00355760949845988,1.01718898543754,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103863610 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra036915","Bra036915",5.940471,586,16.222626,1775,19.690043,1878,1.161218,77,0.872038,56,0.603918,41,{"v":7.07602323775228e-16,"d":"7.08E-16"},-4.4538712981066,"down","[L]","Replication, recombination and repair","Molecular Function: acid phosphatase activity (GO:0003993);; Cellular Component: cytosol (GO:0005829);; ","K03787|0|brp:103871492|K03787 5'-nucleotidase [EC:3.1.3.5] | (RefSeq) 5'-nucleotidase SurE","Purine metabolism (ko00230);; Pyrimidine metabolism (ko00240);; Nicotinate and nicotinamide metabolism (ko00760)","--","--","Survival protein SurE","--","F","Nucleotide transport and metabolism","PREDICTED: uncharacterized protein LOC103871492 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra003196","Bra003196",9.071105,584,10.991462,692,5.633551,472,42.358788,1762,23.493266,1317,23.616917,1373,{"v":1.97467443162308e-07,"d":"1.97E-07"},1.28290245696226,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: water channel activity (GO:0015250);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root hair elongation (GO:0048767);; Biological Process: hydrogen peroxide transmembrane transport (GO:0080170);; ","K09872|0|brp:103829995|K09872 aquaporin PIP | (RefSeq) probable aquaporin PIP2-5","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Probable aquaporin PIP2-5 OS=Arabidopsis thaliana OX=3702 GN=PIP2-5 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable aquaporin PIP2-5 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra034156","Bra034156",3.987671,569,2.22849,321,1.848075,244,1.428212,145,0.790313,77,0.257284,26,0.00155319523867488,-2.05110331331705,"down","[F]","Nucleotide transport and metabolism","Molecular Function: purine nucleobase transmembrane transporter activity (GO:0005345);; Biological Process: adenine transport (GO:0015853);; Biological Process: guanine transport (GO:0015854);; Biological Process: nucleobase-containing compound transport (GO:0015931);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: kinase activity (GO:0016301);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: transmembrane transport (GO:0055085);; Cellular Component: cell periphery (GO:0071944);; ","K06901|0|brp:103847198|K06901 putative MFS transporter, AGZA family, xanthine/uracil permease | (RefSeq) adenine/guanine permease AZG1-like","--","--","--","Permease family","Adenine/guanine permease AZG1 OS=Arabidopsis thaliana OX=3702 GN=AZG1 PE=2 SV=1","S","Function unknown","PREDICTED: adenine/guanine permease AZG1-like isoform X1 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra039402","Bra039402",1.696875,156,3.09658,282,2.339573,199,1.541047,91,1.736258,90,1.096673,74,0.00132865590627979,-1.35369761584139,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein methylation (GO:0006479);; Molecular Function: protein methyltransferase activity (GO:0008276);; ","K19589|5.66655e-178|bna:106375061|K19589 release factor glutamine methyltransferase [EC:2.1.1.297] | (RefSeq) hemK methyltransferase family member 2","--","[J]","Translation, ribosomal structure and biogenesis","Methyltransferase small domain","--","J","Translation, ribosomal structure and biogenesis","BnaC01g37640D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)"]
["Bra020971","Bra020971",1.16091,125,1.837185,181,1.894849,185,7.561922,573,15.507051,1131,16.533293,1193,{"v":2.37229125552488e-08,"d":"2.37E-08"},2.40651847763403,"up","[T]","Signal transduction mechanisms","Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","Transglutaminase-like superfamily","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103834108 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra010483","Bra010483",6.116328,354,3.956781,232,3.211642,172,12.601576,514,19.535657,770,19.426506,772,{"v":3.67280671543623e-05,"d":"3.67E-05"},1.39721161107101,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: nucleotide binding (GO:0000166);; Biological Process: alternative mRNA splicing, via spliceosome (GO:0000380);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cytosol (GO:0005829);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: RNA processing (GO:0006396);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: poly(U) RNA binding (GO:0008266);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: cold acclimation (GO:0009631);; Biological Process: response to salt stress (GO:0009651);; Biological Process: etioplast organization (GO:0009662);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: defense response, incompatible interaction (GO:0009814);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Cellular Component: stromule (GO:0010319);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: base conversion or substitution editing (GO:0016553);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: intracellular ribonucleoprotein complex (GO:0030529);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: cell wall modification (GO:0042545);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: RNA stabilization (GO:0043489);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: innate immune response (GO:0045087);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: carotenoid isomerase activity (GO:0046608);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[R]","General function prediction only","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; RNA recognition motif","31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1","S","Function unknown","PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; cellular component: macromolecular complex (GO:0032991);; cellular component: extracellular region (GO:0005576)"]
["Bra038929","Bra038929",135.419754,4887,112.68235,4104,119.860298,4002,57.609711,1471,42.258556,1039,46.076118,1140,{"v":4.15424109132087e-23,"d":"4.15E-23"},-1.86866100121834,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: defense response (GO:0006952);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: lignan biosynthetic process (GO:0009807);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: biological regulation (GO:0065007);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; ","--","--","--","--","Dirigent-like protein","Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1","S","Function unknown","PREDICTED: dirigent protein 19 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra020752","Bra020752",8.30614,332,17.919817,723,18.878035,698,2.040389,58,1.190174,33,0.875374,24,{"v":5.62134023675376e-13,"d":"5.62E-13"},-3.82307186621014,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: amino acid transport (GO:0006865);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Domain of unknown function (DUF588)","CASP-like protein 1D2 OS=Arabidopsis thaliana OX=3702 GN=At3g06390 PE=1 SV=1","S","Function unknown","PREDICTED: CASP-like protein 1D2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425)"]
["Bra021642","Bra021642",3.484126,355,1.893687,195,1.567272,148,0.082827,6,0,0,0,0,{"v":1.93565838070353e-12,"d":"1.94E-12"},-5.82893773708242,"down","[I]","Lipid transport and metabolism","Molecular Function: triglyceride lipase activity (GO:0004806);; Cellular Component: lipid droplet (GO:0005811);; Biological Process: protein targeting to membrane (GO:0006612);; Molecular Function: phosphatidylcholine 1-acylhydrolase activity (GO:0008970);; Biological Process: response to UV (GO:0009411);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: leaf senescence (GO:0010150);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: triglyceride catabolic process (GO:0019433);; Biological Process: lipid storage (GO:0019915);; Biological Process: negative regulation of cell growth (GO:0030308);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: diacylglycerol catabolic process (GO:0046340);; Molecular Function: acylglycerol lipase activity (GO:0047372);; Molecular Function: galactolipase activity (GO:0047714);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: monoacylglycerol catabolic process (GO:0052651);; ","--","--","[I]","Lipid transport and metabolism","Lipase (class 3)","Phospholipase A1-Igamma2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g30550 PE=1 SV=2","S","Function unknown","PREDICTED: phospholipase A1-Igamma2, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra015837","Bra015837",1.34412,94,0.820958,72,0.748823,47,4.494241,214,12.2612,562,9.201811,503,{"v":5.08121315170776e-07,"d":"5.08E-07"},2.46100016372666,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: pattern specification process (GO:0007389);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: gynoecium development (GO:0048467);; ","--","--","--","--","Domain of unknown function (DUF702)","Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1","S","Function unknown","PREDICTED: protein SHI RELATED SEQUENCE 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414)"]
["Bra002064","Bra002064",0.732071,86,2.609264,306,3.167889,341,0.948507,78,0.330151,27,0.397776,32,0.00151828537553582,-2.30910735093202,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Biological Process: defense response to oomycetes (GO:0002229);; Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: membrane fusion (GO:0006944);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: transmembrane receptor protein serine/threonine kinase signaling pathway (GO:0007178);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: focal adhesion assembly (GO:0048041);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to salt stress (GO:0071472);; ","--","--","--","--","Legume lectin domain;; Protein kinase domain;; Protein tyrosine kinase","L-type lectin-domain containing receptor kinase I.3 OS=Arabidopsis thaliana OX=3702 GN=LECRK13 PE=1 SV=1","T","Signal transduction mechanisms","BnaA07g02650D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra000311","Bra000311",67.184013,3507,36.817875,1940,32.946976,1591,390.945282,14434,1147.429143,40782,1076.236234,38489,{"v":4.96651034419273e-15,"d":"4.97E-15"},3.58959168522066,"up","[R]","General function prediction only","Biological Process: polysaccharide catabolic process (GO:0000272);; Molecular Function: chitinase activity (GO:0004568);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: cell wall (GO:0005618);; Biological Process: chitin catabolic process (GO:0006032);; Biological Process: defense response (GO:0006952);; Molecular Function: chitin binding (GO:0008061);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Biological Process: defense response to fungus (GO:0050832);; ","K01183|2.4964e-164|brp:103858080|K01183 chitinase [EC:3.2.1.14] | (RefSeq) BcCHB4, Bcchi, CHB4, chitinase; basic endochitinase CHB4","Amino sugar and nucleotide sugar metabolism (ko00520)","[R]","General function prediction only","Chitinase class I;; Chitin recognition protein","Basic endochitinase CHB4 OS=Brassica napus OX=3708 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: basic endochitinase CHB4 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704)"]
["Bra012366","Bra012366",3.227164,132,5.783898,238,5.980096,226,0.984821,29,1.248315,35,1.059822,30,{"v":1.74914339451771e-08,"d":"1.75E-08"},-2.64222906433015,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: response to stress (GO:0006950);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism transport (GO:0044765);; Molecular Function: pectinesterase inhibitor activity (GO:0046910);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Plant invertase/pectin methylesterase inhibitor","21 kDa protein OS=Daucus carota OX=4039 PE=2 SV=1","S","Function unknown","PREDICTED: 21 kDa protein-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: enzyme regulator activity (GO:0030234)"]
["Bra030223","Bra030223",0.672109,37,0.763097,46,0.832387,46,3.487787,132,4.185756,176,5.152046,205,{"v":3.83369669222909e-06,"d":"3.83E-06"},1.87395799724906,"up","--","--","--","K14012|2.07078e-159|brp:103864368|K14012 UBX domain-containing protein 1 | (RefSeq) plant UBX domain-containing protein 5-like","Protein processing in endoplasmic reticulum (ko04141)","[Y]","Nuclear structure","SEP domain;; UBX domain;; UBA-like domain","Plant UBX domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PUX5 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","BnaA04g13040D [Brassica napus]","--"]
["Bra017823","Bra017823",40.315083,1588,7.73037,308,10.009142,365,7.062833,197,2.837416,77,5.854636,158,0.00121899917574245,-2.16783239190046,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: anchored component of membrane (GO:0031225);; ","--","--","--","--","--","--","S","Function unknown","lysine-rich arabinogalactan protein 18-like [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)"]
["Brassica_rapa_newGene_23438","--",8.215697,927,3.632358,456,6.87429,747,2.856896,253,2.14511,196,2.259386,178,{"v":2.89321656412172e-07,"d":"2.89E-07"},-1.76916828047491,"down","--","--","--","K07466|5.06091e-21|ath:AT5G61000|K07466 replication factor A1 | (RefSeq) RPA70D; Replication factor-A protein 1-like protein","DNA replication (ko03030);; Nucleotide excision repair (ko03420);; Mismatch repair (ko03430);; Homologous recombination (ko03440)","[L]","Replication, recombination and repair","--","Replication protein A 70 kDa DNA-binding subunit D OS=Arabidopsis thaliana OX=3702 GN=RPA1D PE=2 SV=1","L","Replication, recombination and repair","BnaC09g51190D [Brassica napus]","--"]
["Bra021049","Bra021049",18.998659,1040,42.889965,2368,34.658337,1755,11.606428,450,6.915756,258,6.732507,253,{"v":9.88346589326838e-08,"d":"9.88E-08"},-2.42537744495475,"down","--","--","Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K09286|0|brp:103834015|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor 6-like","--","--","--","AP2 domain","Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=ERF6 PE=2 SV=2","K","Transcription","PREDICTED: ethylene-responsive transcription factor 6-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052)"]
["Bra003276","Bra003276",22.744038,4800,33.59672,7297,31.114724,6326,14.415606,2259,10.55544,1599,10.704672,1618,{"v":7.75595454126105e-09,"d":"7.76E-09"},-1.79721136344101,"down","[P]","Inorganic ion transport and metabolism","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: carbonate dehydratase activity (GO:0004089);; Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: one-carbon metabolic process (GO:0006730);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: cellular zinc ion homeostasis (GO:0006882);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to nematode (GO:0009624);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to ethylene (GO:0009723);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Molecular Function: protein self-association (GO:0043621);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: anion homeostasis (GO:0055081);; Biological Process: calcium ion transmembrane transport (GO:0070588);; ","K01537|0|brp:103830094|K01537 Ca2+-transporting ATPase [EC:3.6.3.8] | (RefSeq) putative calcium-transporting ATPase 11, plasma membrane-type","--","[P]","Inorganic ion transport and metabolism","Cation transporting ATPase, C-terminus;; E1-E2 ATPase;; haloacid dehalogenase-like hydrolase;; Cation transport ATPase (P-type);; Ca2+-ATPase N terminal autoinhibitory domain;; Cation transporter/ATPase, N-terminus;; haloacid dehalogenase-like hydrolase","Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA11 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052)"]
["Bra029262","Bra029262",1.106136,70,4.102974,262,4.134406,241,0,0,0,0,0,0,{"v":2.76566873067081e-14,"d":"2.77E-14"},-7.3461225803496,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Molecular Function: alcohol dehydrogenase (NADP+) activity (GO:0008106);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Molecular Function: steroid dehydrogenase activity (GO:0016229);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity (GO:0047006);; Molecular Function: codeinone reductase (NADPH) activity (GO:0047036);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: NADP+ binding (GO:0070401);; Biological Process: ecgonine methyl ester catabolic process (GO:1901868);; Biological Process: ecgonine methyl ester biosynthetic process (GO:1901869);; Biological Process: ecgonone methyl ester catabolic process (GO:1901871);; Biological Process: ecgonone methyl ester biosynthetic process (GO:1901872);; ","--","--","[R]","General function prediction only","Aldo/keto reductase family","Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum OX=3469 GN=COR2 PE=1 SV=1","S","Function unknown","PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)"]
["Bra039323","Bra039323",25.460462,3824,25.050767,3328,28.226848,3755,22.06298,2268,18.172517,1796,17.156777,1367,{"v":6.8282540754939e-05,"d":"6.83E-05"},-1.05268358075526,"down","[I]","Lipid transport and metabolism","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: binding (GO:0005488);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Biological Process: anion transport (GO:0006820);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: pollen tube growth (GO:0009860);; Cellular Component: membrane (GO:0016020);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; Biological Process: innate immune response (GO:0045087);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: organic substance transport (GO:0071702);; Biological Process: nitrogen compound transport (GO:0071705);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K13510|0|brp:103866226|K13510 lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [EC:2.3.1.23 2.3.1.67] | (RefSeq) lysophospholipid acyltransferase LPEAT2","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565)","[I]","Lipid transport and metabolism","EF-hand domain;; EF hand;; Acyltransferase;; EF-hand domain pair","Lysophospholipid acyltransferase LPEAT2 OS=Arabidopsis thaliana OX=3702 GN=LPEAT2 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: immune system process (GO:0002376)"]
["Bra011698","Bra011698",2.880245,648,2.478184,563,3.697848,770,1.190424,190,1.474171,226,2.501841,386,0.00110206121495997,-1.33035955725789,"down","[K]","Transcription","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: developmental process involved in reproduction (GO:0003006);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: transcription from RNA polymerase II promoter (GO:0006366);; Biological Process: carbohydrate transport (GO:0008643);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","--","--","Protein of unknown function (DUF1195);; Transcription factor TFIIB repeat","Plant-specific TFIIB-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PBRP1 PE=2 SV=1","S","Function unknown","plant-specific TFIIB-related protein 1 isoform X4 [Capsella rubella]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501)"]
["Bra027052","Bra027052",11.698243,1771,26.475685,4044,26.714758,3740,2.785624,299,1.588503,164,1.48233,154,{"v":1.6644975681877e-16,"d":"1.66E-16"},-3.88943731813974,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","[R]","General function prediction only","Calcium-dependent channel, 7TM region, putative phosphate;; Late exocytosis, associated with Golgi transport;; Cytosolic domain of 10TM putative phosphate transporter","CSC1-like protein At1g62320 OS=Arabidopsis thaliana OX=3702 GN=At1g62320 PE=3 SV=2","S","Function unknown","PREDICTED: CSC1-like protein At1g62320 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)"]
["Bra037737","Bra037737",0.498479,40,0.2695,17,0.184382,17,0.675935,46,1.836741,152,1.231885,98,0.0065543980287881,1.84519889435478,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; Molecular Function: peptidase activity (GO:0008233);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: single-multicellular organism process (GO:0044707);; ","--","--","[R]","General function prediction only","Signal peptide peptidase;; PA domain","Signal peptide peptidase-like 3 OS=Arabidopsis thaliana OX=3702 GN=SPPL3 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","BnaA04g24810D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra003980","Bra003980",6.55569,398,6.400077,363,5.320193,283,13.222355,588,21.853381,817,21.001324,860,{"v":5.5110328724262e-05,"d":"5.51E-05"},1.06680963892456,"up","--","--","Molecular Function: transcription regulatory region sequence-specific DNA binding (GO:0000976);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Biological Process: gravitropism (GO:0009630);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to sucrose (GO:0009744);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to nitrate (GO:0010167);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: nitrate transport (GO:0015706);; Biological Process: chlorophyll catabolic process (GO:0015996);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cotyledon morphogenesis (GO:0048826);; ","K09338|0|bna:106357079|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein ATHB-13-like","--","[K]","Transcription","Homeobox domain;; Homeobox associated leucine zipper","Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-13 PE=2 SV=2","K","Transcription","homeobox-leucine zipper protein ATHB-13 [Brassica napus] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra006305","Bra006305",10.688975,529,7.59009,379,11.487251,526,38.905853,1362,49.123863,1656,43.952545,1490,{"v":9.66625363357809e-11,"d":"9.67E-11"},1.58262790485083,"up","[HI]","Coenzyme transport and metabolism;; Lipid transport and metabolism","Molecular Function: acetyl-CoA carboxylase activity (GO:0003989);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: acetyl-CoA carboxylase complex (GO:0009317);; Molecular Function: biotin binding (GO:0009374);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; ","K02160|9.41941e-131|brp:103856142|K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein | (RefSeq) biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic","Fatty acid biosynthesis (ko00061);; Pyruvate metabolism (ko00620);; Propanoate metabolism (ko00640);; Carbon metabolism (ko01200);; Fatty acid metabolism (ko01212)","--","--","Biotin-requiring enzyme;; Biotin-lipoyl like","Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422)"]
["Bra031090","Bra031090",72.732383,4866,69.491137,4634,72.491543,4427,255.580101,11926,240.287279,10728,257.767801,11712,{"v":4.81654868326048e-22,"d":"4.82E-22"},1.24595777298709,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: aconitate hydratase activity (GO:0003994);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: citrate metabolic process (GO:0006101);; Biological Process: isocitrate metabolic process (GO:0006102);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: vacuole organization (GO:0007033);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to salt stress (GO:0009651);; Biological Process: ethylene biosynthetic process (GO:0009693);; Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity (GO:0009815);; Biological Process: xylem development (GO:0010089);; Biological Process: photosynthesis (GO:0015979);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: mRNA 5'-UTR binding (GO:0048027);; Cellular Component: apoplast (GO:0048046);; Biological Process: cellular response to potassium ion starvation (GO:0051365);; Biological Process: iron ion homeostasis (GO:0055072);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to fatty acid (GO:0071398);; Biological Process: cellular response to nitric oxide (GO:0071732);; ","K05933|0|brp:103842633|K05933 aminocyclopropanecarboxylate oxidase [EC:1.14.17.4] | (RefSeq) 1-aminocyclopropane-1-carboxylate oxidase 1","Cysteine and methionine metabolism (ko00270)","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","1-aminocyclopropane-1-carboxylate oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=ACO1 PE=2 SV=1","S","Function unknown","PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; cellular component: extracellular region (GO:0005576);; biological process: biological regulation (GO:0065007)"]
["Bra001308","Bra001308",1.580024,219,4.549953,673,4.806859,683,0.622015,59,0.096532,11,0.095936,11,{"v":3.50446747587423e-07,"d":"3.50E-07"},-3.90858780717357,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: ion binding (GO:0043167);; Biological Process: single-organism transport (GO:0044765);; Biological Process: innate immune response (GO:0045087);; Biological Process: intracellular transport (GO:0046907);; Biological Process: leaf development (GO:0048366);; Biological Process: animal organ development (GO:0048513);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic substance transport (GO:0071702);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Stage II sporulation protein E (SpoIIE)","Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana OX=3702 GN=PLL3 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 36 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra017743","Bra017743",47.280727,5981,67.393333,8603,55.885551,6540,24.041586,2152,20.122925,1734,14.206515,1232,{"v":6.76644469174223e-11,"d":"6.77E-11"},-2.07657478841669,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: actin cytoskeleton organization (GO:0030036);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: defense response by callose deposition (GO:0052542);; Cellular Component: pollen tube tip (GO:0090404);; ","--","--","--","--","Armadillo/beta-catenin-like repeat","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103862451 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra035625","Bra035625",17.888294,608,32.107685,1101,28.577747,898,19.106894,459,7.605032,176,9.353827,218,0.00125380909757822,-1.62782795368851,"down","--","--","Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: nuclear speck (GO:0016607);; Biological Process: response to cadmium ion (GO:0046686);; ","--","--","[K]","Transcription","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103851817 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra032578","Bra032578",9.502196,454,12.568643,603,11.689708,515,8.070773,274,4.005793,130,4.942231,162,0.000188676226106368,-1.50401802897986,"down","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: glutathione transferase activity (GO:0004364);; Molecular Function: glutathione peroxidase activity (GO:0004602);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to abiotic stimulus (GO:0009628);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to metal ion (GO:0010038);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: inorganic anion transport (GO:0015698);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: anion binding (GO:0043168);; Molecular Function: glutathione binding (GO:0043295);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: transition metal ion binding (GO:0046914);; Cellular Component: apoplast (GO:0048046);; Biological Process: lateral root development (GO:0048527);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of flavonol biosynthetic process (GO:1900384);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: alpha-amino acid catabolic process (GO:1901606);; Molecular Function: sulfur compound binding (GO:1901681);; ","K00799|0|brp:103843727|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase F4-like","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain","Glutathione S-transferase F4 OS=Arabidopsis thaliana OX=3702 GN=GSTF4 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase F4-like [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra024353","Bra024353",1.225422,186,3.79064,547,3.585683,496,0.215112,20,0.440585,38,0.327811,35,{"v":7.71918823701981e-10,"d":"7.72E-10"},-3.58523279375439,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: dephosphorylation (GO:0016311);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: inositol trisphosphate metabolic process (GO:0032957);; Molecular Function: phosphatidylinositol phosphate 5-phosphatase activity (GO:0034595);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: intracellular part (GO:0044424);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: inositol phosphate dephosphorylation (GO:0046855);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: biological regulation (GO:0065007);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Endonuclease/Exonuclease/phosphatase family","Type I inositol polyphosphate 5-phosphatase 5 OS=Arabidopsis thaliana OX=3702 GN=IP5P5 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: type I inositol polyphosphate 5-phosphatase 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007)"]
["Bra009387","Bra009387",10.578459,269,13.589598,349,15.358321,362,1.093943,20,0.259997,5,0.041126,1,{"v":5.01431455984884e-10,"d":"5.01E-10"},-4.7168070681136,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","chloride intracellular channel protein 5-like [Brassica napus] ","--"]
["Brassica_rapa_newGene_14830","--",0.365835,35,0.557218,53,0.55934,49,2.753736,182,2.710106,172,4.044316,258,{"v":1.57951498766321e-06,"d":"1.58E-06"},2.02421778358294,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","Thaumatin family","Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1","S","Function unknown","PREDICTED: thaumatin-like protein 1b [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra017207","Bra017207",396.120782,20872,470.261357,25433,423.519364,20512,184.501085,6655,142.914911,4887,140.589089,4739,{"v":1.88894067104168e-18,"d":"1.89E-18"},-2.07828564512771,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to chitin (GO:0010200);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","PLAC8 family","Cell number regulator 8 OS=Zea mays OX=4577 GN=CNR8 PE=2 SV=1","S","Function unknown","PREDICTED: cell number regulator 8-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020)"]
["Bra010818","Bra010818",0.080219,6,0.324332,23,0.122977,6,1.553599,67,1.937363,87,1.015437,48,0.00423792945934774,2.20441950058118,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: chloroplast (GO:0009507);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","--","--","Beta-lactamase superfamily domain;; Beta-lactamase superfamily domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103835263 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra033890","Bra033890",531.629578,22282,343.684708,14763,423.357407,14646,313.29232,9177,268.047493,7547,251.884148,7149,{"v":5.4469018877372e-09,"d":"5.45E-09"},-1.14048308115585,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of translation (GO:0006417);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: lateral root development (GO:0048527);; Biological Process: regulation of biological quality (GO:0065008);; ","K14484|3.43102e-108|brp:103868947|K14484 auxin-responsive protein IAA | (RefSeq) auxin-responsive protein IAA2","Plant hormone signal transduction (ko04075)","--","--","AUX/IAA family","Auxin-responsive protein IAA2 OS=Arabidopsis thaliana OX=3702 GN=IAA2 PE=1 SV=3","K","Transcription","PREDICTED: auxin-responsive protein IAA2 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501)"]
["Bra013797","Bra013797",473.011354,21291,618.581051,28161,577.430607,24108,137.214226,4427,80.117043,2475,87.796096,2732,{"v":8.71090823200664e-21,"d":"8.71E-21"},-2.95055722296136,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: proline transport (GO:0015824);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","[E]","Amino acid transport and metabolism","Serine hydrolase (FSH1);; Phospholipase/Carboxylesterase","Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=STR6 PE=2 SV=1","S","Function unknown","PREDICTED: esterase CG5412 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824)"]
["Bra019910","Bra019910",19.432927,2086,26.74793,2887,26.605589,2690,12.418482,1103,12.794728,1025,11.08785,897,{"v":4.22892774736795e-07,"d":"4.23E-07"},-1.3966016420831,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: metal ion binding (GO:0046872);; ","K19042|0|brp:103871847|K19042 E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27] | (RefSeq) probable BOI-related E3 ubiquitin-protein ligase 2","--","[O]","Posttranslational modification, protein turnover, chaperones","Zinc finger, C3HC4 type (RING finger)","Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1","S","Function unknown","PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra012141","Bra012141",1.589294,212,0.643084,87,0.781977,97,4.279863,403,8.703891,788,8.213835,748,{"v":1.27576047989904e-06,"d":"1.28E-06"},2.20764965403161,"up","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: response to organic substance (GO:0010033);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: regulation of growth (GO:0040008);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular organelle part (GO:0044446);; Cellular Component: plasma membrane part (GO:0044459);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism transport (GO:0044765);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: multi-organism process (GO:0051704);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies)","Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana OX=3702 GN=At5g67200 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable inactive receptor kinase At5g67200 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704)"]
["Brassica_rapa_newGene_24280","--",0.516308,53,0.442126,45,0.233027,24,1.17897,80,2.381843,164,1.738748,126,0.00374858889993886,1.51135225337531,"up","--","--","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: sugar:proton symporter activity (GO:0005351);; Biological Process: carbohydrate transport (GO:0008643);; Biological Process: proton transport (GO:0015992);; Cellular Component: integral component of membrane (GO:0016021);; ","K15272|9.93041e-13|thj:104804307|K15272 solute carrier family 35 (UDP-sugar transporter), member A1/2/3 | (RefSeq) CMP-sialic acid transporter 4","--","[G]","Carbohydrate transport and metabolism","--","CMP-sialic acid transporter 4 OS=Arabidopsis thaliana OX=3702 GN=At4g35335 PE=2 SV=1","EG","Amino acid transport and metabolism;; Carbohydrate transport and metabolism","BnaC09g52620D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Bra027104","Bra027104",0.556613,99,2.479314,444,2.798726,459,0.448186,57,0.376692,46,0.112519,14,0.000151206537355699,-2.88331625459573,"down","--","--","Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: cell differentiation (GO:0030154);; Biological Process: root development (GO:0048364);; ","--","--","--","--","--","Uncharacterized protein At4g04980 OS=Arabidopsis thaliana OX=3702 GN=At4g04980 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At4g04980-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501)"]
["Bra009735","Bra009735",2.438536,243,2.06225,207,2.245333,210,13.151397,930,8.840165,597,10.654943,724,{"v":2.38470001576179e-11,"d":"2.38E-11"},1.69890742615273,"up","[K]","Transcription","Molecular Function: plastid sigma factor activity (GO:0001053);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: DNA-templated transcription, initiation (GO:0006352);; Biological Process: multicellular organism development (GO:0007275);; Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: response to red light (GO:0010114);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cellular response to blue light (GO:0071483);; ","K03093|0|brp:103874286|K03093 RNA polymerase sigma factor | (RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like","--","--","--","Sigma-70 region 3;; Sigma-70, region 4;; Sigma-70 region 2","RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIGE PE=1 SV=1","K","Transcription","PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: protein binding transcription factor activity (GO:0000988);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896)"]
["Bra004392","Bra004392",3.699753,202,3.212109,186,2.018833,107,21.444364,836,36.895346,1374,36.796883,1409,{"v":1.11767660203976e-15,"d":"1.12E-15"},2.7835433203519,"up","--","--","Molecular Function: structural constituent of cell wall (GO:0005199);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: syncytium formation (GO:0006949);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Biological Process: plant-type cell wall modification involved in multidimensional cell growth (GO:0009831);; Biological Process: xylem development (GO:0010089);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of stomatal movement (GO:0010119);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1","G","Carbohydrate transport and metabolism","expansin-A1 precursor [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152)"]
["Bra001339","Bra001339",0.707317,26,0.371211,14,0.248422,9,2.989314,75,4.050289,99,3.239806,80,{"v":2.37276930930235e-05,"d":"2.37E-05"},2.24853051221327,"up","--","--","--","--","--","--","--","Protein of unknown function, DUF538","Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At5g01610-like [Brassica rapa]","--"]
["Bra018216","Bra018216",0.288317,9,1.211855,38,0.529453,16,6.739435,147,6.480278,136,8.161591,172,{"v":5.85851652657571e-05,"d":"5.86E-05"},2.56966855753295,"up","[O]","Posttranslational modification, protein turnover, chaperones","Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein folding (GO:0006457);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: heat acclimation (GO:0010286);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; ","K13993|2.00265e-102|brp:103873314|K13993 HSP20 family protein | (RefSeq) BcHSP, BcHSP17.6; 17.4 kDa class I heat shock protein","Protein processing in endoplasmic reticulum (ko04141)","[O]","Posttranslational modification, protein turnover, chaperones","Hsp20/alpha crystallin family","17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: 17.4 kDa class I heat shock protein [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra039737","Bra039737",47.746522,2329,125.928558,6225,116.232921,5245,49.336707,1703,23.12953,772,23.198475,779,{"v":9.95874497687146e-05,"d":"9.96E-05"},-2.08192770117069,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: amino acid transport (GO:0006865);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Cellular Component: membrane (GO:0016020);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","Late embryogenesis abundant protein","NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1","S","Function unknown","PREDICTED: NDR1/HIN1-Like protein 3 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra037188","Bra037188",6.490573,701,5.499989,572,3.147195,337,11.652341,894,16.46984,1223,15.958903,1281,0.00136756891374815,1.04031477971017,"up","[D]","Cell cycle control, cell division, chromosome partitioning","Molecular Function: fatty-acyl-CoA binding (GO:0000062);; Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: voltage-gated potassium channel activity (GO:0005249);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: endocytosis (GO:0006897);; Molecular Function: GTPase activator activity (GO:0008060);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: glyoxysome (GO:0009514);; Biological Process: response to auxin (GO:0009733);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: flower development (GO:0009908);; Biological Process: cell tip growth (GO:0009932);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: phloem or xylem histogenesis (GO:0010087);; Biological Process: response to lead ion (GO:0010288);; Biological Process: positive regulation of organelle organization (GO:0010638);; Biological Process: monovalent inorganic cation transport (GO:0015672);; Biological Process: cytosolic transport (GO:0016482);; Biological Process: metal ion transport (GO:0030001);; Cellular Component: trans-Golgi network transport vesicle (GO:0030140);; Molecular Function: lead ion binding (GO:0032791);; Biological Process: cellular protein localization (GO:0034613);; Molecular Function: phosphatidylinositol binding (GO:0035091);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: organic substance transport (GO:0071702);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[R]","General function prediction only","Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeat","Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AKRP PE=1 SV=2","S","Function unknown","BnaA09g08100D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: enzyme regulator activity (GO:0030234);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152)"]
["Bra007276","Bra007276",0.925769,51,0.42198,24,0.795958,41,2.657757,104,2.570369,97,3.44649,130,0.00185393429352374,1.42324033860644,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: glucose mediated signaling pathway (GO:0010255);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: reproductive structure development (GO:0048608);; ","K14432|0|brp:103841583|K14432 ABA responsive element binding factor | (RefSeq) ABSCISIC ACID-INSENSITIVE 5-like protein 2","Plant hormone signal transduction (ko04075)","--","--","bZIP transcription factor;; Basic region leucine zipper","ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DPBF3 PE=1 SV=1","K","Transcription","PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra037832","Bra037832",4.597513,239,4.213495,220,3.127722,156,12.900822,481,15.339097,544,21.540787,771,{"v":1.55575296328868e-06,"d":"1.56E-06"},1.48636521949756,"up","--","--","Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: peroxiredoxin activity (GO:0051920);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[S]","Function unknown","AhpC/TSA antioxidant enzyme;; AhpC/TSA family","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: thioredoxin-like protein AAED1, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra004693","Bra004693",1.774628,85,2.477968,119,2.793164,123,0.893362,31,0.901743,30,0.654916,22,{"v":2.59794294187952e-05,"d":"2.60E-05"},-1.97777731901497,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: plastid (GO:0009536);; Biological Process: specification of symmetry (GO:0009799);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: proximal/distal pattern formation (GO:0009954);; Biological Process: xylem development (GO:0010089);; Biological Process: organ boundary specification between lateral organs and the meristem (GO:0010199);; Biological Process: lateral root formation (GO:0010311);; Biological Process: response to organic cyclic compound (GO:0014070);; Biological Process: petal development (GO:0048441);; Biological Process: meristem development (GO:0048507);; Biological Process: regulation of defense response to fungus (GO:1900150);; ","K13944|2.64046e-122|brp:103866636|K13944 LOB domain-containing protein 16 | (RefSeq) LOB domain-containing protein 16","--","--","--","Lateral organ boundaries (LOB) domain","LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1","S","Function unknown","PREDICTED: LOB domain-containing protein 16 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414)"]
["Bra000551","Bra000551",17.459402,2605,15.004516,2262,23.374606,3235,9.970972,1023,11.374115,1148,10.692885,1069,{"v":2.48853327756868e-07,"d":"2.49E-07"},-1.37350110122813,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","zinc-finger of the FCS-type, C2-C2","Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103858365 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra014390","Bra014390",54.491438,6228,64.642504,7453,54.629013,5778,47.480343,3838,35.601409,2770,29.967467,2348,{"v":2.24611841235974e-05,"d":"2.25E-05"},-1.16466411225221,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell communication (GO:0007154);; Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Molecular Function: racemase and epimerase activity, acting on carbohydrates and derivatives (GO:0016857);; Biological Process: dTDP-rhamnose biosynthetic process (GO:0019305);; Biological Process: D-xylose metabolic process (GO:0042732);; Molecular Function: UDP-glucuronate decarboxylase activity (GO:0048040);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: cellular response to stimulus (GO:0051716);; ","K08678|0|brp:103862773|K08678 UDP-glucuronate decarboxylase [EC:4.1.1.35] | (RefSeq) UDP-glucuronic acid decarboxylase 2","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[GM]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; Male sterility protein;; RmlD substrate binding domain","UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-glucuronic acid decarboxylase 2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Brassica_rapa_newGene_3617","--",4.868769,426,3.742901,331,4.47335,349,12.632273,729,13.901763,732,17.804704,946,{"v":1.5356325054834e-06,"d":"1.54E-06"},1.06866321305103,"up","--","--","--","--","--","--","--","Peptidase inhibitor I9","Subtilisin-like protease SBT3.8 OS=Arabidopsis thaliana OX=3702 GN=SBT3.8 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: subtilisin-like protease SBT3.8 [Brassica rapa]","--"]
["Bra014227","Bra014227",3.106174,264,1.669551,134,1.862467,139,5.761805,355,9.252902,526,8.110003,487,0.000290005472149659,1.30589072720484,"up","--","--","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: double-stranded telomeric DNA binding (GO:0003691);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: single-stranded telomeric DNA binding (GO:0043047);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: nucleic acid metabolic process (GO:0090304);; ","K09422|4.31493e-151|brp:103832906|K09422 myb proto-oncogene protein, plant | (RefSeq) telomere repeat-binding factor 1-like","--","--","--","Myb-like DNA-binding domain;; linker histone H1 and H5 family","Telomere repeat-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=TRB1 PE=1 SV=1","K","Transcription","PREDICTED: telomere repeat-binding factor 1-like isoform X1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra027526","Bra027526",0.641167,76,3.338327,379,3.641773,386,0.313669,33,0.12067,13,0.04002,5,{"v":1.14481952724389e-05,"d":"1.14E-05"},-3.62593339688,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of salicylic acid metabolic process (GO:0010337);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: ATPase-coupled arsenite transmembrane transporter activity (GO:0015446);; Biological Process: arsenite transport (GO:0015700);; Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity (GO:0016756);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: cadmium ion binding (GO:0046870);; Biological Process: phytochelatin biosynthetic process (GO:0046938);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: phytochelatin transmembrane transporter activity (GO:0071992);; Biological Process: phytochelatin transmembrane transport (GO:0071994);; ","K05941|0|brp:103839206|K05941 glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15] | (RefSeq) glutathione gamma-glutamylcysteinyltransferase 1-like","--","[P]","Inorganic ion transport and metabolism","Domain of unknown function (DUF1984);; Phytochelatin synthase","Glutathione gamma-glutamylcysteinyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=PCS1 PE=1 SV=1","S","Function unknown","PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: multi-organism process (GO:0051704)"]
["Bra018143","Bra018143",38.126804,1362,90.484146,3260,94.478561,3120,5.831804,148,1.521152,37,3.47129,85,{"v":1.0200723207941e-15,"d":"1.02E-15"},-4.63931887010582,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; ","K13448|1.56589e-128|brp:103873239|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML47","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region","Probable calcium-binding protein CML47 OS=Arabidopsis thaliana OX=3702 GN=CML47 PE=2 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML47 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra020409","Bra020409",0.224067,15,0.435674,30,0.26944,19,1.51491,72,1.701004,81,1.331602,63,0.00310810520143156,1.60453007114714,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Zein-binding","Myosin-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=MYOB7 PE=1 SV=1","S","Function unknown","BnaA02g08060D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra005827","Bra005827",1.973425,156,1.736409,140,1.169172,76,4.314416,238,5.450441,291,5.769267,322,0.00155319523867488,1.14486540502117,"up","[C]","Energy production and conversion","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: protein binding (GO:0005515);; Biological Process: lipid biosynthetic process (GO:0008610);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Biological Process: chlorophyll catabolic process (GO:0015996);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Molecular Function: chlorophyll(ide) b reductase activity (GO:0034256);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: response to stimulus (GO:0050896);; Biological Process: oxidation-reduction process (GO:0055114);; ","K13606|0|brp:103855594|K13606 chlorophyll(ide) b reductase [EC:1.1.1.294] | (RefSeq) chlorophyll(ide) b reductase NOL, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","[R]","General function prediction only","short chain dehydrogenase;; Enoyl-(Acyl carrier protein) reductase;; KR domain;; Polysaccharide biosynthesis protein","Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NOL PE=1 SV=1","S","Function unknown","PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Bra022963","Bra022963",4.259205,500,6.403221,781,7.510379,833,0.192208,13,0,0,0.056057,7,{"v":3.5582660881873e-18,"d":"3.56E-18"},-6.12935057254185,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: chloroplast (GO:0009507);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Cellular Component: membrane (GO:0016020);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","--","--","EF hand;; EF-hand domain;; EF-hand domain pair;; EF hand","Sodium/calcium exchanger NCL OS=Arabidopsis thaliana OX=3702 GN=NCL PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103857518 isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020)"]
["Bra015842","Bra015842",45.669334,5319,118.383438,13797,119.465126,13095,40.121716,3380,16.341504,1295,7.088195,785,{"v":7.7198274370242e-05,"d":"7.72E-05"},-2.48730387744841,"down","[C]","Energy production and conversion","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Molecular Function: primary amine oxidase activity (GO:0008131);; Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762);; Cellular Component: plastid (GO:0009536);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cytokinin catabolic process (GO:0009823);; Biological Process: xylem development (GO:0010089);; Biological Process: inflorescence development (GO:0010229);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);; Molecular Function: cytokinin dehydrogenase activity (GO:0019139);; Biological Process: electron transport chain (GO:0022900);; Biological Process: secretion by cell (GO:0032940);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: meristem development (GO:0048507);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; ","K00279|0|brp:103831996|K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 5","Zeatin biosynthesis (ko00908)","[C]","Energy production and conversion","Cytokinin dehydrogenase 1, FAD and cytokinin binding;; FAD binding domain","Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana OX=3702 GN=CKX5 PE=2 SV=1","C","Energy production and conversion","PREDICTED: cytokinin dehydrogenase 5 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra034004","Bra034004",1.412202,107,2.603484,203,1.701635,121,1.237865,67,0.85903,51,0.969059,51,0.0040414276200283,-1.36874830595412,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","MYND finger","F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1","S","Function unknown","PREDICTED: F-box protein At1g67340-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra031619","Bra031619",39.916805,3253,9.098335,749,8.947913,675,0.314365,19,0.418621,24,0.145214,9,{"v":6.8538773546553e-21,"d":"6.85E-21"},-5.94228945090903,"down","[E]","Amino acid transport and metabolism","Molecular Function: prephenate dehydratase activity (GO:0004664);; Cellular Component: cytosol (GO:0005829);; Biological Process: tyrosine biosynthetic process (GO:0006571);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: L-phenylalanine biosynthetic process (GO:0009094);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: vernalization response (GO:0010048);; Biological Process: response to low fluence blue light stimulus by blue low-fluence system (GO:0010244);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: arogenate dehydratase activity (GO:0047769);; Biological Process: carpel development (GO:0048440);; Biological Process: response to karrikin (GO:0080167);; ","K05359|0|brp:103843407|K05359 arogenate/prephenate dehydratase [EC:4.2.1.91 4.2.1.51] | (RefSeq) arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Prephenate dehydratase","Arogenate dehydratase/prephenate dehydratase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADT6 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra000628","Bra000628",0,0,0,0,0,0,2.462425,122,1.544443,74,1.828005,88,{"v":1.57060113145337e-12,"d":"1.57E-12"},6.75929425308154,"up","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: Golgi trans cisterna (GO:0000138);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: glucose catabolic process (GO:0006007);; Molecular Function: glycogenin glucosyltransferase activity (GO:0008466);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);; Cellular Component: cytosolic ribosome (GO:0022626);; Cellular Component: cell junction (GO:0030054);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: UDP-L-arabinose metabolic process (GO:0033356);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: UDP-arabinopyranose mutase activity (GO:0052691);; Biological Process: cell wall organization (GO:0071555);; ","K13379|0|brp:103858454|K13379 reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30] | (RefSeq) probable UDP-arabinopyranose mutase 4","Amino sugar and nucleotide sugar metabolism (ko00520)","--","--","Reversibly glycosylated polypeptide","Probable UDP-arabinopyranose mutase 4 OS=Arabidopsis thaliana OX=3702 GN=RGP4 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable UDP-arabinopyranose mutase 4 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991)"]
["Bra020107","Bra020107",5.914289,293,4.20399,211,3.686982,169,24.30926,852,27.263002,919,34.726272,1178,{"v":1.39984586000899e-15,"d":"1.40E-15"},2.07955147877461,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: mitotic cell cycle (GO:0007067);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: chromatin organization (GO:0016568);; Molecular Function: methylated histone binding (GO:0035064);; Biological Process: positive regulation of translation (GO:0045727);; Biological Process: root hair elongation (GO:0048767);; Biological Process: metal ion homeostasis (GO:0055065);; Biological Process: cellular response to salt stress (GO:0071472);; ","--","--","[R]","General function prediction only","Alfin;; PHD-finger","PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1","S","Function unknown","PREDICTED: PHD finger protein ALFIN-LIKE 5 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra032646","Bra032646",14.811813,1692,13.762049,1593,13.248918,1413,9.239742,764,6.458799,615,9.096616,707,{"v":2.55350243053759e-14,"d":"2.55E-14"},-1.21563556814607,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; Cellular Component: endosome membrane (GO:0010008);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: single-multicellular organism process (GO:0044707);; ","K09597|0|brp:103843803|K09597 signal peptide peptidase-like 2B [EC:3.4.23.-] | (RefSeq) signal peptide peptidase-like 4","--","[R]","General function prediction only","Signal peptide peptidase;; PA domain","Signal peptide peptidase-like 4 OS=Arabidopsis thaliana OX=3702 GN=SPPL4 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: signal peptide peptidase-like 4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra025334","Bra025334",19.949049,2303,31.389944,3657,27.151033,2900,18.29356,1494,11.735139,923,11.233702,889,{"v":4.65450010918744e-05,"d":"4.65E-05"},-1.46675059649416,"down","[K]","Transcription","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Molecular Function: lipid binding (GO:0008289);; Biological Process: response to UV (GO:0009411);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen development (GO:0009555);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: tissue development (GO:0009888);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: developmental maturation (GO:0021700);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: cellular biosynthetic process (GO:0044249);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism transport (GO:0044765);; Biological Process: innate immune response (GO:0045087);; Biological Process: external encapsulating structure organization (GO:0045229);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: anther wall tapetum cell differentiation (GO:0048657);; Biological Process: negative regulation of cell death (GO:0060548);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cellular response to organic cyclic compound (GO:0071407);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Inactive LRR receptor-like serine/threonine-protein kinase BIR2 OS=Arabidopsis thaliana OX=3702 GN=BIR2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414)"]
["Bra023635","Bra023635",42.097748,3839,25.748003,2370,20.844664,1759,84.219467,5433,95.87561,5954,94.486328,5904,{"v":6.18749197435327e-05,"d":"6.19E-05"},1.09189616863807,"up","[MDT]","Cell wall/membrane/envelope biogenesis;; Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms","Cellular Component: proteasome complex (GO:0000502);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: response to stress (GO:0006950);; Biological Process: female gamete generation (GO:0007292);; Molecular Function: peptidase activity (GO:0008233);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: embryo sac development (GO:0009553);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to blue light (GO:0009637);; Biological Process: plastid organization (GO:0009657);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: response to organic substance (GO:0010033);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Molecular Function: ion binding (GO:0043167);; Biological Process: cellular protein complex assembly (GO:0043623);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: thylakoid part (GO:0044436);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: cell development (GO:0048468);; Biological Process: meristem development (GO:0048507);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: establishment of localization (GO:0051234);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Cellular Component: cell periphery (GO:0071944);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Domain associated at C-terminal with AAA;; ATPase family associated with various cellular activities (AAA);; AAA domain (dynein-related subfamily);; Holliday junction DNA helicase ruvB N-terminus","AAA-ATPase At5g17760 OS=Arabidopsis thaliana OX=3702 GN=At5g17760 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: AAA-ATPase At5g17760-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra035753","Bra035753",0.187258,36,0.718848,125,0.340212,64,1.89275,233,2.105685,260,2.45561,340,0.0036975288437861,1.70136800222787,"up","--","--","--","--","--","[S]","Function unknown","--","--","S","Function unknown","BnaA05g20220D [Brassica napus]","--"]
["Bra015807","Bra015807",3.700091,142,5.009421,194,4.495959,159,1.05877,29,1.234641,33,0.943229,25,{"v":2.5020172237668e-10,"d":"2.50E-10"},-2.50216043792763,"down","[R]","General function prediction only","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: sphingomyelin phosphodiesterase activity (GO:0004767);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: spindle (GO:0005819);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: actin filament organization (GO:0007015);; Biological Process: small GTPase mediated signal transduction (GO:0007264);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: phragmoplast (GO:0009524);; Cellular Component: secondary cell wall (GO:0009531);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: protein transport (GO:0015031);; Biological Process: regulation of exocytosis (GO:0017157);; Molecular Function: protein kinase binding (GO:0019901);; Molecular Function: protein phosphatase binding (GO:0019903);; Cellular Component: site of polarized growth (GO:0030427);; Biological Process: regulation of actin filament polymerization (GO:0030833);; Biological Process: regulation of actin filament depolymerization (GO:0030834);; Molecular Function: GTPase activating protein binding (GO:0032794);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Cellular Component: apical part of cell (GO:0045177);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: root hair elongation (GO:0048767);; Biological Process: establishment of vesicle localization (GO:0051650);; Biological Process: cell wall organization (GO:0071555);; ","K04392|2.48141e-131|brp:103832035|K04392 Ras-related C3 botulinum toxin substrate 1 | (RefSeq) rac-like GTP-binding protein ARAC5","Phagosome (ko04145);; AGE-RAGE signaling pathway in diabetic complications (ko04933)","[R]","General function prediction only","Ras family;; Ras of Complex, Roc, domain of DAPkinase","Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana OX=3702 GN=ARAC5 PE=1 SV=1","S","Function unknown","PREDICTED: rac-like GTP-binding protein ARAC5 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501)"]
["Bra029977","Bra029977",23.688043,1303,67.015249,3820,58.474679,2871,9.013882,323,7.759673,259,5.059857,164,{"v":2.72688472585889e-11,"d":"2.73E-11"},-3.35960374860514,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: RNA modification (GO:0009451);; Biological Process: megasporogenesis (GO:0009554);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: root development (GO:0048364);; ","--","--","--","--","--","--","--","--","predicted protein [Arabidopsis lyrata subsp. lyrata]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501)"]
["Bra028468","Bra028468",3.435678,441,1.844207,204,1.672632,197,6.01031,562,8.217152,752,9.850147,814,0.000609582345981768,1.30165758724583,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana OX=3702 GN=At3g27390 PE=1 SV=2","S","Function unknown","PREDICTED: uncharacterized membrane protein At3g27390-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)"]
["Bra006248","Bra006248",4.138712,137,1.95643,66,2.65196,81,14.239153,333,9.785886,220,14.149673,320,{"v":4.3416549649774e-05,"d":"4.34E-05"},1.55592903756654,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: mitochondrial small ribosomal subunit (GO:0005763);; Biological Process: DNA-templated transcription, elongation (GO:0006354);; Biological Process: translation (GO:0006412);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: ribosome biogenesis (GO:0042254);; ","K02952|1.65519e-110|brp:103856071|K02952 small subunit ribosomal protein S13 | (RefSeq) 30S ribosomal protein S13, chloroplastic","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein S13/S18","30S ribosomal protein S13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS13 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica rapa] ","molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra011567","Bra011567",6.074769,842,5.126902,740,4.154042,676,16.79083,1659,21.607083,2776,18.030969,2359,{"v":1.348069569785e-08,"d":"1.35E-08"},1.52774883250336,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: sucrose alpha-glucosidase activity (GO:0004575);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: sucrose catabolic process (GO:0005987);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: regulation of meristem growth (GO:0010075);; Molecular Function: glycopeptide alpha-N-acetylgalactosaminidase activity (GO:0033926);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root development (GO:0048364);; ","--","--","--","--","Alkaline and neutral invertase;; Amylo-alpha-1,6-glucosidase","Probable alkaline/neutral invertase B OS=Arabidopsis thaliana OX=3702 GN=INVB PE=1 SV=1","S","Function unknown","PREDICTED: probable alkaline/neutral invertase B [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra003493","Bra003493",27.354845,4773,33.648724,5937,36.594384,5916,20.901183,2585,19.236758,2289,18.37065,2200,{"v":1.09141525898534e-07,"d":"1.09E-07"},-1.29140701119284,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","--","--","S","Function unknown","PREDICTED: zinc finger protein 598 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra001725","Bra001725",49.752908,5220,79.180057,8446,73.06437,7174,46.703038,3466,23.824944,1706,20.176823,1468,0.00013867173991949,-1.67754452852448,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Molecular Function: galactose transmembrane transporter activity (GO:0005354);; Molecular Function: glucose transmembrane transporter activity (GO:0005355);; Molecular Function: myo-inositol transmembrane transporter activity (GO:0005365);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: seed germination (GO:0009845);; Molecular Function: D-xylose transmembrane transporter activity (GO:0015148);; Molecular Function: glycerol transmembrane transporter activity (GO:0015168);; Molecular Function: mannitol transmembrane transporter activity (GO:0015575);; Molecular Function: sorbitol transmembrane transporter activity (GO:0015576);; Molecular Function: D-ribose transmembrane transporter activity (GO:0015591);; Biological Process: monosaccharide transport (GO:0015749);; Biological Process: D-ribose transport (GO:0015752);; Biological Process: D-xylose transport (GO:0015753);; Biological Process: galactose transport (GO:0015757);; Biological Process: glucose transport (GO:0015758);; Biological Process: glycerol transport (GO:0015793);; Biological Process: sorbitol transport (GO:0015795);; Biological Process: mannitol transport (GO:0015797);; Biological Process: myo-inositol transport (GO:0015798);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: amino acid import (GO:0043090);; Biological Process: positive regulation of post-embryonic development (GO:0048582);; Biological Process: oxidation-reduction process (GO:0055114);; Cellular Component: pollen tube (GO:0090406);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Polyol transporter 5 OS=Arabidopsis thaliana OX=3702 GN=PLT5 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: polyol transporter 5 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra002264","Bra002264",0.845509,64,0.430282,37,0.565529,40,3.622824,193,3.420383,189,3.902213,214,{"v":4.90268003437006e-10,"d":"4.90E-10"},2.01102892262826,"up","[HR]","Coenzyme transport and metabolism;; General function prediction only","Molecular Function: catalytic activity (GO:0003824);; Biological Process: multicellular organism development (GO:0007275);; Cellular Component: plastid (GO:0009536);; Biological Process: response to abiotic stimulus (GO:0009628);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[R]","General function prediction only","alpha/beta hydrolase fold;; Alpha/beta hydrolase family;; Serine aminopeptidase, S33","Pheophytinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPH PE=1 SV=1","S","Function unknown","PREDICTED: pheophytinase, chloroplastic [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152)"]
["Bra005887","Bra005887",58.907337,1578,42.74773,1155,38.863789,963,132.692337,2514,163.056686,2973,156.809769,2877,{"v":4.71806211138926e-09,"d":"4.72E-09"},1.14200727479901,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: ribosomal small subunit assembly (GO:0000028);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: ribosome (GO:0005840);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Biological Process: translational elongation (GO:0006414);; Cellular Component: cytosolic small ribosomal subunit (GO:0022627);; ","K02962|2.80096e-94|brp:103855666|K02962 small subunit ribosomal protein S17e | (RefSeq) 40S ribosomal protein S17-4-like","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal S17","40S ribosomal protein S17-4 OS=Arabidopsis thaliana OX=3702 GN=RPS17D PE=2 SV=3","J","Translation, ribosomal structure and biogenesis","PREDICTED: 40S ribosomal protein S17-4-like [Brassica rapa]","biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra006391","Bra006391",0.553536,52,0.581939,59,0.242713,24,4.862242,328,5.820862,339,7.25839,423,{"v":2.0373711761476e-13,"d":"2.04E-13"},2.89984157211938,"up","[I]","Lipid transport and metabolism","Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastoglobule (GO:0010287);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: carotene biosynthetic process (GO:0016120);; Molecular Function: geranylgeranyl-diphosphate geranylgeranyltransferase activity (GO:0016767);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: phytoene synthase activity (GO:0046905);; ","K02291|0|brp:103856237|K02291 15-cis-phytoene/all-trans-phytoene synthase [EC:2.5.1.32 2.5.1.99] | (RefSeq) phytoene synthase, chloroplastic-like","Carotenoid biosynthesis (ko00906)","[I]","Lipid transport and metabolism","Squalene/phytoene synthase","Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV=2","I","Lipid transport and metabolism","PREDICTED: phytoene synthase, chloroplastic-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra001761","Bra001761",13.908731,975,7.169385,507,5.204689,338,0,0,0,0,0,0,{"v":1.54456491346201e-26,"d":"1.54E-26"},-9.08642340205964,"down","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Molecular Function: branched-chain-amino-acid transaminase activity (GO:0004084);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: branched-chain amino acid metabolic process (GO:0009081);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Molecular Function: methionine-oxo-acid transaminase activity (GO:0010326);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Molecular Function: L-leucine transaminase activity (GO:0052654);; Molecular Function: L-valine transaminase activity (GO:0052655);; Molecular Function: L-isoleucine transaminase activity (GO:0052656);; ","K00826|0|brp:103859824|K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] | (RefSeq) BCAT4-1; methionine aminotransferase BCAT4","Cysteine and methionine metabolism (ko00270);; Valine, leucine and isoleucine degradation (ko00280);; Valine, leucine and isoleucine biosynthesis (ko00290);; Pantothenate and CoA biosynthesis (ko00770);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Amino-transferase class IV","Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana OX=3702 GN=BCAT4 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: methionine aminotransferase BCAT4 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052)"]
["Bra023849","Bra023849",2.548934,98,3.112921,121,4.717451,167,1.075049,30,2.399191,63,1.962308,52,0.00966343074835605,-1.42029013820809,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","VQ motif","VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1","S","Function unknown","PREDICTED: VQ motif-containing protein 22-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra004299","Bra004299",46.746833,2167,42.776742,2086,37.046092,1779,6.241397,427,5.083876,330,3.942608,269,{"v":5.20599626587465e-29,"d":"5.21E-29"},-2.58135944595809,"down","--","--","--","--","--","--","--","Protein of unknown function (DUF1639)","--","--","--","PREDICTED: uncharacterized protein LOC103831248 [Brassica rapa]","--"]
["Bra016096","Bra016096",15.669528,661,63.239282,3005,59.562569,2604,4.288183,137,4.865912,146,3.422879,92,{"v":5.27456460637503e-11,"d":"5.27E-11"},-3.90578198472905,"down","--","--","--","--","--","--","--","Peptidase inhibitor I9","Subtilisin-like protease SBT3.11 OS=Arabidopsis thaliana OX=3702 GN=SBT3.11 PE=2 SV=1","S","Function unknown","PREDICTED: subtilisin-like protease SBT3.16 [Brassica rapa]","--"]
["Bra039847","Bra039847",87.123444,5122,208.413788,12364,233.708664,12710,38.132469,1586,24.343582,975,34.721725,1399,{"v":3.03301020317322e-10,"d":"3.03E-10"},-2.91971834944132,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ethylene biosynthetic process (GO:0009693);; ","--","--","--","--","Protein of unknown function (DUF1645)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103848000 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra011618","Bra011618",0.617556,24,0.291574,12,0.510187,18,2.828403,76,7.699018,198,5.087475,132,{"v":2.66237401287171e-06,"d":"2.66E-06"},2.70883593422953,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: pollen development (GO:0009555);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Biological Process: proline transport (GO:0015824);; Cellular Component: membrane (GO:0016020);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: regulation of jasmonic acid biosynthetic process (GO:0080141);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger;; Anaphase-promoting complex subunit 11 RING-H2 finger","Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin-protein ligase ATL45 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007)"]
["Bra027346","Bra027346",4.541995,508,7.600215,832,7.733104,779,4.006713,308,4.132222,309,2.015249,157,0.000801236958204974,-1.48643768039099,"down","[I]","Lipid transport and metabolism","Molecular Function: triglyceride lipase activity (GO:0004806);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: chloroplast (GO:0009507);; ","--","--","[I]","Lipid transport and metabolism","Lipase (class 3)","Phospholipase A1-II 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0651100 PE=3 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103870034 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra035049","Bra035049",17.775563,3313,22.483885,4225,25.044752,4324,18.180322,2406,9.792215,1256,11.449133,1504,0.000485522530049559,-1.25067918009093,"down","[G]","Carbohydrate transport and metabolism","Biological Process: response to singlet oxygen (GO:0000304);; Molecular Function: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity (GO:0003825);; Molecular Function: trehalose-phosphatase activity (GO:0004805);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: diterpenoid biosynthetic process (GO:0016102);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: animal organ development (GO:0048513);; Biological Process: cell division (GO:0051301);; Molecular Function: (E,E)-geranyllinalool synthase activity (GO:0080013);; Biological Process: response to herbivore (GO:0080027);; ","K16055|0|brp:103832336|K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] | (RefSeq) alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1","Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Glycosyltransferase family 20;; Trehalose-phosphatase","Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana OX=3702 GN=TPS1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra028578","Bra028578",25.578133,1216,62.174587,2983,63.482147,2792,11.173453,376,2.570176,84,1.892971,62,{"v":7.70219758016309e-07,"d":"7.70E-07"},-3.49849928487846,"down","[S]","Function unknown","Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: iron ion transport (GO:0006826);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; ","--","--","--","--","Protein of unknown function, DUF599","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103850314 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra026392","Bra026392",0.803971,171,0.591005,134,0.514136,113,1.586442,262,1.832197,333,3.026404,441,0.00016341739734435,1.25331350770643,"up","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; ","K20855|9.51047e-47|bna:106375647|K20855 beta-1,3-galactosyltransferase 1/2/3/4/5/7/8 [EC:2.4.1.-] | (RefSeq) probable beta-1,3-galactosyltransferase 4","--","[G]","Carbohydrate transport and metabolism","Domain of unknown function (DUF4094)","Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=B3GALT4 PE=2 SV=1","S","Function unknown","probable beta-1,3-galactosyltransferase 4 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra007601","Bra007601",1.837303,151,3.537082,361,4.454231,374,0.425945,34,1.174628,54,0.664069,53,{"v":2.24209550079162e-06,"d":"2.24E-06"},-2.60303028717194,"down","--","--","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: phosphorylation (GO:0016310);; Biological Process: carpel development (GO:0048440);; ","--","--","--","--","--","U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2","--","--","PREDICTED: U-box domain-containing protein 33 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra004958","Bra004958",2.920032,495,2.399607,411,2.755627,433,8.689332,1040,13.186085,1523,11.949229,1388,{"v":6.74945408749904e-10,"d":"6.75E-10"},1.49913675953333,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Protein of unknown function (DUF3522)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103866945 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: membrane (GO:0016020)"]
["Bra012847","Bra012847",24.924145,2633,36.814468,3924,31.590872,3087,5.224069,391,2.000962,144,2.6288,191,{"v":3.70053283825948e-17,"d":"3.70E-17"},-3.67666827468203,"down","--","--","Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Molecular Function: lipid transporter activity (GO:0005319);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phospholipid transfer to membrane (GO:0006649);; Molecular Function: lipid binding (GO:0008289);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: programmed cell death (GO:0012501);; Biological Process: cuticle development (GO:0042335);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","--","Protease inhibitor/seed storage/LTP family;; Probable lipid transfer","Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana OX=3702 GN=LTP5 PE=1 SV=1","--","--","BnaC07g32320D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; cellular component: extracellular region (GO:0005576)"]
["Bra028907","Bra028907",1.152539,157,3.312026,454,3.253713,409,0.200298,20,0.207196,20,0.062168,6,{"v":1.21756070955232e-10,"d":"1.22E-10"},-4.20647748585951,"down","[NW]","Cell motility;; Extracellular structures","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: response to cold (GO:0009409);; Biological Process: pollen development (GO:0009555);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: seed germination (GO:0009845);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: kinase activity (GO:0016301);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of stomatal closure (GO:0090333);; Biological Process: negative regulation of defense response to bacterium (GO:1900425);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","--","--","Legume lectin domain;; Protein kinase domain;; Protein tyrosine kinase","Lectin-domain containing receptor kinase VI.3 OS=Arabidopsis thaliana OX=3702 GN=LECRK63 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: lectin-domain containing receptor kinase VI.3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra013267","Bra013267",1.419751,85,0.701259,43,0.486234,27,3.184193,135,3.359615,137,3.217204,132,0.00664189563457368,1.32960358034385,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: ribosome (GO:0005840);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: GPI anchor biosynthetic process (GO:0006506);; Biological Process: signal transduction (GO:0007165);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: pollen development (GO:0009555);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; Biological Process: regulation of programmed cell death (GO:0043067);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: innate immune response (GO:0045087);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of jasmonic acid biosynthetic process (GO:0080141);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger","Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: putative RING-H2 finger protein ATL53 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra007016","Bra007016",41.22171,5662,32.029196,4465,34.942927,4333,22.779579,2180,14.558309,1353,15.016019,1342,{"v":7.05811327284054e-10,"d":"7.06E-10"},-1.59609807353566,"down","[CP]","Energy production and conversion;; Inorganic ion transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: inorganic diphosphatase activity (GO:0004427);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: innate immune response (GO:0045087);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to other organism (GO:0051707);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K01507|1.98524e-159|brp:103841287|K01507 inorganic pyrophosphatase [EC:3.6.1.1] | (RefSeq) soluble inorganic pyrophosphatase 4","Oxidative phosphorylation (ko00190)","[C]","Energy production and conversion","Inorganic pyrophosphatase","Soluble inorganic pyrophosphatase 4 OS=Arabidopsis thaliana OX=3702 GN=PPA4 PE=1 SV=1","C","Energy production and conversion","PREDICTED: soluble inorganic pyrophosphatase 4 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)"]
["Bra019964","Bra019964",1.619567,164,1.376793,153,0.894359,98,0.403437,25,0.197516,20,0.283933,24,{"v":9.1728694097359e-11,"d":"9.17E-11"},-2.55143105679517,"down","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Molecular Function: branched-chain-amino-acid transaminase activity (GO:0004084);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: branched-chain amino acid metabolic process (GO:0009081);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Molecular Function: methionine-oxo-acid transaminase activity (GO:0010326);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Molecular Function: L-leucine transaminase activity (GO:0052654);; Molecular Function: L-valine transaminase activity (GO:0052655);; Molecular Function: L-isoleucine transaminase activity (GO:0052656);; ","K00826|0|brp:103871785|K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] | (RefSeq) branched-chain-amino-acid aminotransferase 1, mitochondrial","Cysteine and methionine metabolism (ko00270);; Valine, leucine and isoleucine degradation (ko00280);; Valine, leucine and isoleucine biosynthesis (ko00290);; Pantothenate and CoA biosynthesis (ko00770);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Amino-transferase class IV","Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BCAT1 PE=1 SV=2","E","Amino acid transport and metabolism","BnaA06g37970D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052)"]
["Bra034798","Bra034798",1.653051,404,0.874596,203,0.958261,220,4.034322,598,5.081474,862,4.304257,746,{"v":3.83650414096171e-05,"d":"3.84E-05"},1.37345837470103,"up","[H]","Coenzyme transport and metabolism","Molecular Function: dimethylallyltranstransferase activity (GO:0004161);; Molecular Function: nucleocytoplasmic transporter activity (GO:0005487);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: sulfur compound metabolic process (GO:0006790);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: negative regulation of flower development (GO:0009910);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: vitamin E biosynthetic process (GO:0010189);; Biological Process: plastoquinone biosynthetic process (GO:0010236);; Molecular Function: homogentisate farnesyltransferase activity (GO:0010355);; Molecular Function: homogentisate geranylgeranyltransferase activity (GO:0010356);; Molecular Function: homogentisate solanesyltransferase activity (GO:0010357);; Biological Process: chlorophyll metabolic process (GO:0015994);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: pre-miRNA export from nucleus (GO:0035281);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Biological Process: root development (GO:0048364);; ","--","--","--","--","UbiA prenyltransferase family;; TRAF-type zinc finger","Homogentisate solanesyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HST PE=1 SV=1","H","Coenzyme transport and metabolism","PREDICTED: uncharacterized protein LOC103870293 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra025235","Bra025235",10.528777,1387,14.355008,2061,17.218966,2111,8.591389,868,9.987203,950,12.821228,1062,0.00237440039292979,-1.01039272947693,"down","--","--","Biological Process: developmental process involved in reproduction (GO:0003006);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular component organization (GO:0016043);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: system development (GO:0048731);; Biological Process: response to stimulus (GO:0050896);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","--","--","--","Uncharacterized protein At2g33490 OS=Arabidopsis thaliana OX=3702 GN=At2g33490 PE=4 SV=2","S","Function unknown","uncharacterized protein At2g33490-like isoform X1 [Brassica napus]","biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra019905","Bra019905",26.349508,3088,33.878603,4002,36.171942,3689,23.910251,1842,22.35298,1736,25.14453,2005,{"v":4.86127370812008e-05,"d":"4.86E-05"},-1.00764977483818,"down","[FE]","Nucleotide transport and metabolism;; Amino acid transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: ribose phosphate diphosphokinase activity (GO:0004749);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: heme biosynthetic process (GO:0006783);; Biological Process: nucleoside metabolic process (GO:0009116);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Biological Process: carbohydrate derivative biosynthetic process (GO:1901137);; ","--","--","[FE]","Nucleotide transport and metabolism;; Amino acid transport and metabolism","Phosphoribosyl transferase domain;; BSD domain;; Phosphoribosyl synthetase-associated domain","Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRS3 PE=2 SV=1","F","Nucleotide transport and metabolism","PREDICTED: ribose-phosphate pyrophosphokinase 3, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra035359","Bra035359",8.756814,907,6.010871,634,5.858298,579,5.204944,399,4.072097,289,3.805003,271,{"v":8.05035250942471e-06,"d":"8.05E-06"},-1.16530652377513,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Biological Process: proteolysis (GO:0006508);; Biological Process: defense response (GO:0006952);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism metabolic process (GO:0044710);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor N-terminal;; Eukaryotic aspartyl protease;; Xylanase inhibitor C-terminal","Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g65240 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: aspartic proteinase-like protein 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra004050","Bra004050",0.476374,50,0.139618,15,0.179094,18,8.364745,525,8.836527,510,11.581266,700,{"v":5.74132725950618e-20,"d":"5.74E-20"},4.21649398982424,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: iron ion transport (GO:0006826);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: detection of gravity (GO:0009590);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: negative gravitropism (GO:0009959);; Biological Process: circumnutation (GO:0010031);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: protein self-association (GO:0043621);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: lateral root development (GO:0048527);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: regulation of starch metabolic process (GO:2000904);; ","--","--","[R]","General function prediction only","Zinc-finger of C2H2 type;; MamL-1 domain","Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1","S","Function unknown","PREDICTED: protein indeterminate-domain 14-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502)"]
["Bra027254","Bra027254",195.129418,6211,149.170723,5002,204.753357,5961,73.234478,1646,59.049879,1231,63.48387,1385,{"v":2.20949534911149e-24,"d":"2.21E-24"},-2.05175368938183,"down","--","--","Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular component organization (GO:0016043);; Biological Process: growth (GO:0040007);; Biological Process: response to chemical (GO:0042221);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism transport (GO:0044765);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of biological quality (GO:0065008);; ","--","--","--","--","--","Metallothionein-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=MT3 PE=1 SV=1","S","Function unknown","PREDICTED: metallothionein-like protein 3 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra030488","Bra030488",16.316903,2021,15.904886,2005,13.415839,1539,6.540975,584,7.966514,681,5.363704,456,{"v":1.84916151610446e-13,"d":"1.85E-13"},-1.72138018884462,"down","[F]","Nucleotide transport and metabolism","Molecular Function: formate-tetrahydrofolate ligase activity (GO:0004329);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: folic acid-containing compound biosynthetic process (GO:0009396);; Cellular Component: chloroplast (GO:0009507);; Biological Process: tetrahydrofolate interconversion (GO:0035999);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; ","K01938|0|brp:103868620|K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] | (RefSeq) formate--tetrahydrofolate ligase-like","One carbon pool by folate (ko00670);; Carbon metabolism (ko01200)","--","--","Formate--tetrahydrofolate ligase","Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana OX=3702 GN=THFS PE=2 SV=1","F","Nucleotide transport and metabolism","PREDICTED: formate--tetrahydrofolate ligase-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576)"]
["Bra028220","Bra028220",0.326159,53,0.018644,4,0.027027,5,0.571722,66,1.720787,190,1.695695,188,0.00964973440536804,2.44233840454128,"up","--",null,"Biological Process: transition metal ion transport (GO:0000041);; Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Cellular Component: extracellular region (GO:0005576);; Biological Process: glycolytic process (GO:0006096);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: response to stress (GO:0006950);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: meiotic cell cycle (GO:0007126);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: pollen tube reception (GO:0010483);; Cellular Component: apical plasma membrane (GO:0016324);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: filiform apparatus (GO:0043680);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Cellular Component: pollen tube tip (GO:0090404);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Carbohydrate-binding protein of the ER;; Di-glucose binding within endoplasmic reticulum","Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: putative receptor-like protein kinase At5g39000 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra040643","Bra040643",4.765501,610,3.049423,396,2.737973,323,2.656562,240,2.245342,197,2.374317,211,0.000173440923059546,-1.04577178397514,"down","--","--","Cellular Component: plasmodesma (GO:0009506);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: metal ion transport (GO:0030001);; Biological Process: cell differentiation (GO:0030154);; Biological Process: multicellular organismal process (GO:0032501);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism developmental process (GO:0044767);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1","S","Function unknown","PREDICTED: glycine-rich cell wall structural protein 1.8-like [Brassica rapa]","cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra006061","Bra006061",5.152853,437,2.810562,251,3.398284,276,9.226179,559,12.030309,684,14.229371,843,0.000543687074389259,1.07085938879116,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: SCF complex assembly (GO:0010265);; Biological Process: phosphorylation (GO:0016310);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Molecular Function: protein domain specific binding (GO:0019904);; Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: protein phosphorylated amino acid binding (GO:0045309);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: leaf development (GO:0048366);; ","K06630|1.45953e-172|brp:103855867|K06630 14-3-3 protein epsilon | (RefSeq) 14-3-3-like protein GF14 lambda","--","[O]","Posttranslational modification, protein turnover, chaperones","14-3-3 protein","14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana OX=3702 GN=GRF6 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: 14-3-3-like protein GF14 lambda [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra003564","Bra003564",553.927979,49435,1087.750122,97962,1121.062134,92552,282.067139,17809,110.500061,6716,112.578873,6885,{"v":1.53188308907866e-08,"d":"1.53E-08"},-2.89219576117962,"down","[R]","General function prediction only","Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Molecular Function: glycerate kinase activity (GO:0008887);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: photorespiration (GO:0009853);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: phosphorylation (GO:0016310);; ","K15918|0|brp:103830434|K15918 D-glycerate 3-kinase [EC:2.7.1.31] | (RefSeq) D-glycerate 3-kinase, chloroplastic-like","Glycine, serine and threonine metabolism (ko00260);; Glycerolipid metabolism (ko00561);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200)","[R]","General function prediction only","Phosphoribulokinase / Uridine kinase family","D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLYK PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: D-glycerate 3-kinase, chloroplastic-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle part (GO:0044422)"]
["Bra003389","Bra003389",2.880276,484,1.939295,302,2.198169,344,7.664001,892,8.308362,876,7.494201,751,{"v":7.32645141747287e-07,"d":"7.33E-07"},1.1108313558816,"up","--","--","Biological Process: maltose metabolic process (GO:0000023);; Cellular Component: nucleus (GO:0005634);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism process (GO:0044699);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","--","Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAS PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103830228 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007)"]
["Bra015711","Bra015711",16.363354,1970,25.919485,3148,28.656736,3191,18.243345,1554,13.665684,1121,13.458439,1110,0.000955603285332308,-1.19542691517905,"down","--","--","--","--","--","[R]","General function prediction only","Tub family;; F-box domain","Tubby-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=TULP1 PE=2 SV=1","S","Function unknown","PREDICTED: tubby-like F-box protein 1 [Brassica rapa] ","--"]
["Bra038778","Bra038778",1.313321,113,0.565479,53,0.46649,28,2.439541,149,3.349208,206,3.351065,192,0.00958112305183367,1.43643116160443,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: serine-type endopeptidase activity (GO:0004252);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: proteolysis (GO:0006508);; Biological Process: metabolic process (GO:0008152);; Molecular Function: serine-type peptidase activity (GO:0008236);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: cellular process (GO:0009987);; Biological Process: seed coat development (GO:0010214);; Biological Process: coenzyme M biosynthetic process (GO:0019295);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Biological Process: regulation of biological process (GO:0050789);; ","--","--","--","--","(2R)-phospho-3-sulfolactate synthase (ComA);; Subtilase family;; Peptidase inhibitor I9","Subtilisin-like protease SBT3.1 OS=Arabidopsis thaliana OX=3702 GN=SBT3.1 PE=3 SV=2","S","Function unknown","putative protein [Arabidopsis thaliana] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)"]
["Bra040904","Bra040904",24.297975,1828,54.254982,4092,59.604826,4134,5.689531,302,9.561298,486,8.641737,442,{"v":3.56263264146261e-11,"d":"3.56E-11"},-3.01085299134185,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: membrane (GO:0016020);; Biological Process: regulation of anthocyanin biosynthetic process (GO:0031540);; Cellular Component: intracellular part (GO:0044424);; ","--","--","[DR]","Cell cycle control, cell division, chromosome partitioning;; General function prediction only","MATH domain","Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2","S","Function unknown","PREDICTED: probable inactive serine/threonine-protein kinase fnkC [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007)"]
["Bra036002","Bra036002",7.135921,884,12.704659,1788,14.716464,1859,0.130108,15,0,0,0,0,0.00294552584775504,-3.6993664292832,"down","[P]","Inorganic ion transport and metabolism","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: N,N-dimethylaniline monooxygenase activity (GO:0004499);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Biological Process: defense response (GO:0006952);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: auxin biosynthetic process (GO:0009851);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: inflorescence development (GO:0010229);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Biological Process: regulation of anatomical structure morphogenesis (GO:0022603);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: indolepyruvate decarboxylase activity (GO:0047434);; Biological Process: cotyledon development (GO:0048825);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Molecular Function: NADP binding (GO:0050661);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: regulation of leaf development (GO:2000024);; ","K11816|0|bna:106409809|K11816 indole-3-pyruvate monooxygenase [EC:1.14.13.168] | (RefSeq) probable indole-3-pyruvate monooxygenase YUCCA5","Tryptophan metabolism (ko00380)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Flavin-binding monooxygenase-like;; Pyridine nucleotide-disulphide oxidoreductase;; L-lysine 6-monooxygenase (NADPH-requiring);; Pyridine nucleotide-disulphide oxidoreductase;; FAD binding domain;; Pyridine nucleotide-disulphide oxidoreductase;; NAD(P)-binding Rossmann-like domain;; FAD-NAD(P)-binding","Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana OX=3702 GN=YUC5 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: membrane part (GO:0044425);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra031221","Bra031221",26.187246,1020,79.687861,3127,93.075255,3343,4.081113,115,1.208124,33,1.145638,32,{"v":1.01626280980653e-14,"d":"1.02E-14"},-5.05319464787597,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: signal transduction (GO:0007165);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plastid (GO:0009536);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: establishment of cell polarity (GO:0030010);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 59 OS=Arabidopsis thaliana OX=3702 GN=WRKY59 PE=2 SV=2","K","Transcription","PREDICTED: probable WRKY transcription factor 59 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra022398","Bra022398",132.530716,16353,131.083603,16322,103.723679,11840,67.934875,5931,39.082287,3285,37.097916,3137,{"v":4.03854842064493e-09,"d":"4.04E-09"},-1.86473310604712,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","VID27 cytoplasmic protein","Protein CYPRO4 OS=Cynara cardunculus OX=4265 GN=CYPRO4 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: protein CYPRO4 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra034552","Bra034552",0.600179,53,0.070229,13,0.781704,66,2.290262,200,4.982589,358,3.860824,319,0.000129398474290436,2.47613403782965,"up","[K]","Transcription","Biological Process: nuclear-transcribed mRNA catabolic process (GO:0000956);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: auxin homeostasis (GO:0010252);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: animal organ formation (GO:0048645);; Biological Process: anatomical structure development (GO:0048856);; ","--","--","[R]","General function prediction only","Leucine Rich repeats (2 copies);; Leucine rich repeat","F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana OX=3702 GN=FBL15 PE=2 SV=2","S","Function unknown","BnaA08g11870D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra006951","Bra006951",1.585078,145,2.99917,274,2.963634,244,1.730648,113,0.528575,33,0.57529,38,0.00547300294923122,-1.80698636429722,"down","[T]","Signal transduction mechanisms","Molecular Function: acid phosphatase activity (GO:0003993);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Molecular Function: manganese ion binding (GO:0030145);; Biological Process: single-multicellular organism process (GO:0044707);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: phosphate ion homeostasis (GO:0055062);; ","--","--","[G]","Carbohydrate transport and metabolism","Calcineurin-like phosphoesterase;; Purple acid Phosphatase, N-terminal domain;; Iron/zinc purple acid phosphatase-like protein C","Purple acid phosphatase 22 OS=Arabidopsis thaliana OX=3702 GN=PAP22 PE=2 SV=1","S","Function unknown","PREDICTED: purple acid phosphatase 22 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007)"]
["Bra009500","Bra009500",1.617799,213,1.601556,205,1.781069,216,6.184043,547,8.166471,711,9.76073,837,{"v":5.40217394880355e-09,"d":"5.40E-09"},1.64654412519584,"up","[V]","Defense mechanisms","Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: response to stress (GO:0006950);; Biological Process: gravitropism (GO:0009630);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: epidermal cell differentiation (GO:0009913);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: auxin efflux (GO:0010315);; Molecular Function: auxin efflux transmembrane transporter activity (GO:0010329);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: acropetal auxin transport (GO:0010541);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: regulation of cellular component size (GO:0032535);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: root development (GO:0048364);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: cell development (GO:0048468);; Biological Process: phyllome development (GO:0048827);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K02021|0|brp:103847350|K02021 putative ABC transport system ATP-binding protein | (RefSeq) ABC transporter B family member 29, chloroplastic","--","[U]","Intracellular trafficking, secretion, and vesicular transport","ABC transporter;; ABC transporter transmembrane region","ABC transporter B family member 29, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCB29 PE=1 SV=1","V","Defense mechanisms","PREDICTED: ABC transporter B family member 29, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra017117","Bra017117",104.973999,9858,127.415428,12105,146.41785,12592,76.572229,5093,58.945539,3752,61.704743,4026,{"v":2.54491704903993e-08,"d":"2.54E-08"},-1.48104885999699,"down","--","--","--","K13424|0|brp:103865671|K13424 WRKY transcription factor 33 | (RefSeq) WRKY, WRKY33; probable WRKY transcription factor 33","Plant-pathogen interaction (ko04626)","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 PE=1 SV=2","K","Transcription","PREDICTED: probable WRKY transcription factor 33 [Brassica rapa]","--"]
["Bra024080","Bra024080",10.653239,1003,16.057865,1525,18.482426,1609,10.151127,676,3.651702,234,2.207201,143,0.00173121997110711,-1.9355713184305,"down","--","--","Biological Process: amino acid transport (GO:0006865);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","EamA-like transporter family","WAT1-related protein At4g30420 OS=Arabidopsis thaliana OX=3702 GN=At4g30420 PE=3 SV=1","S","Function unknown","PREDICTED: WAT1-related protein At4g30420-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896)"]
["Bra006339","Bra006339",21.005663,1684,19.369566,1567,29.786028,2208,14.105551,800,15.012094,820,15.021784,825,{"v":1.12079906971481e-05,"d":"1.12E-05"},-1.21475374702871,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103856181, partial [Brassica rapa]","--"]
["Bra008918","Bra008918",18.663723,1235,75.849686,5064,83.585617,5116,1.905655,90,0.374031,17,1.708375,78,{"v":3.47805981262432e-15,"d":"3.48E-15"},-5.49432567440476,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: circadian rhythm (GO:0007623);; ","--","--","--","--","--","Protein BIG GRAIN 1-like D OS=Arabidopsis thaliana OX=3702 GN=At5g12050 PE=2 SV=1","S","Function unknown","PREDICTED: protein BIG GRAIN 1-like D [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: rhythmic process (GO:0048511)"]
["Bra035157","Bra035157",0.216901,10,0,0,0.275617,11,2.605492,77,4.443277,127,6.830168,196,{"v":7.37061128174021e-05,"d":"7.37E-05"},3.54020947908972,"up","--","--","Biological Process: regionalization (GO:0003002);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: ion transport (GO:0006811);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: trichome differentiation (GO:0010026);; Biological Process: floral meristem determinacy (GO:0010582);; Cellular Component: cytosolic ribosome (GO:0022626);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: animal organ formation (GO:0048645);; Biological Process: phyllome development (GO:0048827);; Biological Process: cellular component organization or biogenesis (GO:0071840);; ","--","--","--","--","--","Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger protein 1-like [Brassica rapa]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra007213","Bra007213",0.89635,113,1.889466,233,1.117491,129,0.041331,5,0.084072,8,0.021333,2,{"v":1.50458884430116e-12,"d":"1.50E-12"},-4.63079120528555,"down","[IR]","Lipid transport and metabolism;; General function prediction only","Cellular Component: extracellular region (GO:0005576);; Biological Process: alcohol metabolic process (GO:0006066);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cell-cell signaling (GO:0007267);; Molecular Function: choline dehydrogenase activity (GO:0008812);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo sac development (GO:0009553);; Biological Process: fatty acid omega-oxidation (GO:0010430);; Molecular Function: aldehyde-lyase activity (GO:0016832);; Biological Process: petal development (GO:0048441);; Biological Process: stamen development (GO:0048443);; Biological Process: plant ovule development (GO:0048481);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[R]","General function prediction only","GMC oxidoreductase;; GMC oxidoreductase","Protein HOTHEAD OS=Arabidopsis thaliana OX=3702 GN=HTH PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: protein HOTHEAD-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; molecular function: binding (GO:0005488)"]
["Bra031445","Bra031445",21.461747,8514,15.843037,6431,18.0442,6735,14.420248,4054,13.091915,3520,13.133943,3547,{"v":7.4398599125916e-13,"d":"7.44E-13"},-1.00389798755082,"down","[R]","General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: mRNA processing (GO:0006397);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: defense response (GO:0006952);; Biological Process: organelle organization (GO:0006996);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: flower development (GO:0009908);; Biological Process: posttranscriptional regulation of gene expression (GO:0010608);; Biological Process: negative regulation of gene expression (GO:0010629);; Cellular Component: membrane (GO:0016020);; Biological Process: cell cycle process (GO:0022402);; Biological Process: macromolecule localization (GO:0033036);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: protein complex (GO:0043234);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: intracellular transport (GO:0046907);; Biological Process: meristem development (GO:0048507);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: organic substance transport (GO:0071702);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K18643|0|brp:103830433|K18643 katanin p80 WD40 repeat-containing subunit B1 | (RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog","--","[D]","Cell cycle control, cell division, chromosome partitioning","con80 domain of Katanin;; WD domain, G-beta repeat;; Anaphase-promoting complex subunit 4 WD40 domain;; Eukaryotic translation initiation factor eIF2A","Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g23430 PE=2 SV=3","S","Function unknown","PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422)"]
["Bra001384","Bra001384",5.736188,263,8.346715,1024,9.277629,1072,1.131922,89,0.654762,45,2.276099,82,{"v":1.24320805177282e-07,"d":"1.24E-07"},-3.31432770781582,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; ","--","--","--","--","LURP-one-related","Protein LURP-one-related 9 OS=Arabidopsis thaliana OX=3702 GN=At3g10986 PE=3 SV=1","S","Function unknown","PREDICTED: protein LURP-one-related 9 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra033699","Bra033699",1.096317,115,0.946297,100,1.002383,97,2.860965,212,2.649344,189,4.937,354,0.00226610496733039,1.19794830850593,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular process (GO:0009987);; Biological Process: reproductive structure development (GO:0048608);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis thaliana OX=3702 GN=At5g43820 PE=3 SV=1","S","Function unknown","PREDICTED: putative pentatricopeptide repeat-containing protein At5g43820 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414)"]
["Bra032293","Bra032293",166.697296,23027,184.514374,25721,192.577927,24609,75.545517,7383,21.747215,2046,24.355497,2306,{"v":6.60584195757896e-07,"d":"6.61E-07"},-2.58845768892871,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo development (GO:0009790);; Biological Process: root development (GO:0048364);; Biological Process: shoot system development (GO:0048367);; ","--","--","--","--","--","Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1","S","Function unknown","BnaA09g54170D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501)"]
["Bra016732","Bra016732",33.726025,1191,62.886917,2241,40.079262,1310,12.730113,318,34.814602,838,27.385725,663,0.0055957372211893,-1.38563863495889,"down","--","--","--","--","--","[A]","RNA processing and modification","--","--","T","Signal transduction mechanisms","PREDICTED: uncharacterized protein LOC103836107 [Brassica rapa]","--"]
["Brassica_rapa_newGene_10220","--",0.176154,13,0,0,0,0,0.962394,60,2.852917,149,2.073323,115,0.00242938675556958,3.38904881069639,"up","--","--","--","--","--","--","--","Zinc knuckle","--","--","--","uncharacterized protein LOC111202330 [Brassica napus]","--"]
["Bra039284","Bra039284",2.871014,376,4.672525,690,5.46058,738,2.656941,277,2.748808,274,1.91962,180,0.00292529891024568,-1.35048925240963,"down","[HJ]","Coenzyme transport and metabolism;; Translation, ribosomal structure and biogenesis","Biological Process: immune effector process (GO:0002252);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: response to wounding (GO:0009611);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: jasmonic acid and ethylene-dependent systemic resistance (GO:0009861);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to mycotoxin (GO:0010046);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to UV-B (GO:0010224);; Molecular Function: indole-3-acetic acid amido synthetase activity (GO:0010279);; Biological Process: membrane organization (GO:0016044);; Biological Process: detection of fungus (GO:0016046);; Biological Process: benzoate metabolic process (GO:0018874);; Molecular Function: enzyme binding (GO:0019899);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to lipid (GO:0033993);; Biological Process: positive regulation of plant-type hypersensitive response (GO:0034052);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: small molecule biosynthetic process (GO:0044283);; Biological Process: interspecies interaction between organisms (GO:0044419);; Biological Process: negative regulation of biological process (GO:0048519);; Molecular Function: 4-aminobenzoate amino acid synthetase activity (GO:0052625);; Molecular Function: benzoate amino acid synthetase activity (GO:0052626);; Molecular Function: vanillate amino acid synthetase activity (GO:0052627);; Molecular Function: 4-hydroxybenzoate amino acid synthetase activity (GO:0052628);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of biological quality (GO:0065008);; Molecular Function: adenylyltransferase activity (GO:0070566);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: jasmonate-amino synthetase activity (GO:0080123);; Biological Process: response to alcohol (GO:0097305);; Biological Process: positive regulation of camalexin biosynthetic process (GO:1901183);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; Biological Process: regulation of response to red or far red light (GO:2000030);; Biological Process: regulation of reactive oxygen species metabolic process (GO:2000377);; ","K14506|0|brp:103866275|K14506 jasmonic acid-amino synthetase | (RefSeq) jasmonic acid-amido synthetase JAR1-like","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","Jasmonic acid-amido synthetase JAR1 OS=Arabidopsis thaliana OX=3702 GN=JAR1 PE=1 SV=2","S","Function unknown","PREDICTED: jasmonic acid-amido synthetase JAR1-like [Brassica rapa]","biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra002318","Bra002318",23.201702,653,17.709702,503,15.132367,394,48.097069,958,65.306427,1252,65.375992,1261,{"v":3.44263519386551e-06,"d":"3.44E-06"},1.12340378849468,"up","--","--","Cellular Component: late endosome (GO:0005770);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abscisic acid (GO:0009737);; Molecular Function: high-affinity copper ion transmembrane transporter activity (GO:0015089);; Biological Process: intracellular copper ion transport (GO:0015680);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: intrinsic component of membrane (GO:0031224);; Biological Process: copper ion transmembrane transport (GO:0035434);; ","K14686|1.01127e-96|brp:103845656|K14686 solute carrier family 31 (copper transporter), member 1 | (RefSeq) copper transporter 5","--","[P]","Inorganic ion transport and metabolism","Ctr copper transporter family","Copper transporter 5 OS=Arabidopsis thaliana OX=3702 GN=COPT5 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: copper transporter 5 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Bra024706","Bra024706",0.332736,22,0.063519,5,0.103936,7,1.44547,65,1.154897,50,2.016785,88,0.00084739936188605,2.35981939771025,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: response to stimulus (GO:0050896);; ","--","--","[R]","General function prediction only","C2H2-type zinc finger;; C2H2-type zinc finger;; Zinc-finger double-stranded RNA-binding","Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger protein ZAT1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra022714","Bra022714",20.718153,1667,36.207401,2940,37.094353,2761,0,0,0,0,0,0,{"v":3.59427738548607e-44,"d":"3.59E-44"},-10.957618507101,"down","--","--","Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","Root cap","--","S","Function unknown","BnaA02g35500D [Brassica napus]","cellular component: extracellular region (GO:0005576)"]
["Bra010593","Bra010593",1.782679,106,1.04134,63,0.637922,36,7.485916,315,3.568805,145,4.105196,168,0.00468879943271318,1.52897687986897,"up","--","--","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: cell fate specification (GO:0001708);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: transcription coactivator activity (GO:0003713);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: trichome branching (GO:0010091);; Biological Process: pollen tube guidance (GO:0010183);; Biological Process: response to chitin (GO:0010200);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of synergid differentiation (GO:0045697);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: trichome patterning (GO:0048629);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);; Biological Process: regulation of secondary cell wall biogenesis (GO:2000652);; ","K09422|0|brp:103835025|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB44-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor MYB44-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: protein binding transcription factor activity (GO:0000988);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: locomotion (GO:0040011);; biological process: signaling (GO:0023052);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501)"]
["Bra017202","Bra017202",1.809422,100,4.910305,305,3.863077,229,0.399704,18,0.099826,6,0.502088,19,{"v":5.41970406769141e-08,"d":"5.42E-08"},-3.64773970808538,"down","[R]","General function prediction only","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plastid (GO:0009536);; Biological Process: cytokinin biosynthetic process (GO:0009691);; Biological Process: maintenance of floral meristem identity (GO:0010076);; Biological Process: maintenance of inflorescence meristem identity (GO:0010077);; Biological Process: regulation of vegetative meristem growth (GO:0010083);; Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: specification of plant organ number (GO:0048832);; ","K06966|4.15287e-153|brp:103865582|K06966 uncharacterized protein | (RefSeq) cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3","--","--","--","Possible lysine decarboxylase","Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1","S","Function unknown","PREDICTED: cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG3 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Brassica_rapa_newGene_30309","--",1.305752,65,3.995853,201,5.07598,242,0,0,0.035918,2,0,0,{"v":2.29342308272923e-12,"d":"2.29E-12"},-6.34575945391807,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","[R]","General function prediction only","--","--","S","Function unknown","PREDICTED: protein ACCELERATED CELL DEATH 6-like, partial [Brassica rapa]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra019818","Bra019818",4.885445,1144,8.78058,2119,9.375079,2086,4.832716,769,4.092284,559,3.710715,541,{"v":9.2935403092563e-05,"d":"9.29E-05"},-1.56623610384217,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: metabolic process (GO:0008152);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism (GO:0015662);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of biological process (GO:0050789);; ","K01530|0|brp:103871952|K01530 phospholipid-translocating ATPase [EC:3.6.3.1] | (RefSeq) probable phospholipid-transporting ATPase 11","--","[R]","General function prediction only","Phospholipid-translocating P-type ATPase C-terminal;; Phospholipid-translocating ATPase N-terminal;; Cation transport ATPase (P-type);; haloacid dehalogenase-like hydrolase;; E1-E2 ATPase","Probable phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana OX=3702 GN=ALA11 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: probable phospholipid-transporting ATPase 11 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007)"]
["Bra019977","Bra019977",0.614696,71,0.650268,76,0.802648,86,2.860274,234,3.597485,283,2.079118,165,0.000208471891010826,1.44624899929178,"up","--","--","Molecular Function: adenylate cyclase activity (GO:0004016);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat;; Mitochondrial 28S ribosomal protein S27;; Mitochondrial ATPase expression;; Tetratricopeptide repeat;; Vps23 core domain","Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra032875","Bra032875",1.495156,138,1.525166,150,1.766461,182,1.14675,87,0.701584,51,0.527067,43,0.00286902932046328,-1.40108222671367,"down","[E]","Amino acid transport and metabolism","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: vacuole (GO:0005773);; Biological Process: proteolysis (GO:0006508);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; ","K16297|0|brp:103838988|K16297 serine carboxypeptidase-like clade II [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 45","--","[OE]","Posttranslational modification, protein turnover, chaperones;; Amino acid transport and metabolism","Serine carboxypeptidase","Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana OX=3702 GN=SCPL45 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: serine carboxypeptidase-like 45 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra039811","Bra039811",1.813046,266,1.367382,203,1.150252,157,4.402444,457,5.334442,533,4.080116,411,{"v":1.29689175006676e-05,"d":"1.30E-05"},1.11970048679409,"up","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Cellular Component: membrane (GO:0016020);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: plant ovule development (GO:0048481);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Mitochondrial 28S ribosomal protein S27;; Tetratricopeptide repeat;; Mitochondrial ATPase expression;; Sensor_kinase_SpoOB-type, alpha-helical domain;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152)"]
["Bra016254","Bra016254",18.925634,1429,29.60561,2255,21.825603,1524,6.962346,372,2.828241,146,2.759313,143,{"v":6.37290687993069e-10,"d":"6.37E-10"},-2.92963177749208,"down","--","--","--","--","--","--","--","Domain of unknown function (DUF569);; Fascin domain","--","--","--","PREDICTED: uncharacterized protein LOC103831536 [Brassica rapa]","--"]
["Bra031409","Bra031409",56.146667,1722,37.847969,1171,40.713314,1155,24.668884,535,21.291929,445,25.296682,532,{"v":1.31436838609954e-13,"d":"1.31E-13"},-1.44524739277992,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","Protein of unknown function, DUF538","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103830973 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra027054","Bra027054",9.943144,3878,18.117301,7009,20.566374,7172,7.713556,2313,5.868327,1684,7.631098,2227,{"v":3.64084217426324e-05,"d":"3.64E-05"},-1.58834259742699,"down","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: response to stress (GO:0006950);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: meiosis I (GO:0007127);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: seed germination (GO:0009845);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: cellular lipid catabolic process (GO:0044242);; Cellular Component: intracellular part (GO:0044424);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: stamen development (GO:0048443);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: chromosome organization (GO:0051276);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to other organism (GO:0051707);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: divalent metal ion transport (GO:0070838);; Biological Process: nucleic acid metabolic process (GO:0090304);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain","Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana OX=3702 GN=At5g49770 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179)"]
["Bra032152","Bra032152",0.732869,24,0.18717,6,0.102319,3,2.930807,66,13.84339,299,13.011506,282,{"v":3.88816277160142e-06,"d":"3.89E-06"},3.7793907547648,"up","--","--","Biological Process: pentose-phosphate shunt (GO:0006098);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103864484 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra004548","Bra004548",0.786581,42,0.641797,34,0.524003,26,1.598495,60,3.761289,135,3.393979,122,0.00381500184544735,1.53308484163349,"up","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: response to chitin (GO:0010200);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: nuclear body (GO:0016604);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: transcription factor import into nucleus (GO:0042991);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: cotyledon development (GO:0048825);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to freezing (GO:0071497);; Biological Process: carbohydrate derivative biosynthetic process (GO:1901137);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN=CRF5 PE=1 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor CRF5 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; cellular component: membrane-enclosed lumen (GO:0031974);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704)"]
["Bra024828","Bra024828",1.269854,128,0.986246,110,0.781745,76,3.346853,234,4.860191,347,2.828274,194,0.00133484875450792,1.2413686525697,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: protein binding (GO:0005515);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: galacturonate binding (GO:0048032);; ","--","--","--","--","Remorin, C-terminal region","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103827527 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)"]
["Bra025123","Bra025123",4.74709,726,3.053945,471,3.521377,502,11.775101,1281,13.501689,1403,12.726739,1329,{"v":5.26405109024685e-10,"d":"5.26E-10"},1.19824161719239,"up","[E]","Amino acid transport and metabolism","Molecular Function: asparagine synthase (glutamine-hydrolyzing) activity (GO:0004066);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: asparagine biosynthetic process (GO:0006529);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: ATPase activity (GO:0016887);; ","--","--","[E]","Amino acid transport and metabolism","Asparagine synthase;; Glutamine amidotransferase domain","Cell division control protein 48 homolog B OS=Arabidopsis thaliana OX=3702 GN=CDC48B PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: asparagine synthetase domain-containing protein 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226)"]
["Bra021801","Bra021801",1.978846,53,1.411495,39,0.760596,19,7.131477,136,7.055537,129,8.552959,157,{"v":4.19699559323916e-05,"d":"4.20E-05"},1.84641921433641,"up","[R]","General function prediction only","Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid chromosome (GO:0009508);; ","--","--","--","--","Protein of unknown function (DUF861)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103865212 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422)"]
["Bra011850","Bra011850",26.098475,471,62.653145,1141,36.40406,608,13.827882,177,7.304765,90,7.44837,93,{"v":3.15342637934414e-07,"d":"3.15E-07"},-2.58426284344015,"down","--","--","--","--","--","--","--","--","--","--","--","BnaA01g05600D [Brassica napus]","--"]
["Bra013526","Bra013526",7.784941,538,3.170638,226,4.361306,280,2.482372,121,0.225015,12,0.434179,23,0.00275355501258006,-2.44063510561082,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: seed germination (GO:0009845);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103859038|K09422 myb proto-oncogene protein, plant | (RefSeq) myb-related protein 308","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1","K","Transcription","PREDICTED: myb-related protein 308 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra020011","Bra020011",74.179329,4275,119.484474,6948,108.435249,5780,44.436523,1812,29.920813,1175,30.494984,1205,{"v":1.56653649572295e-09,"d":"1.57E-09"},-2.05732323522952,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","K20858|0|brp:103871731|K20858 calcium uniporter protein, mitochondrial | (RefSeq) calcium uniporter protein 6, mitochondrial","--","[R]","General function prediction only","Mitochondrial calcium uniporter","Calcium uniporter protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g09575 PE=2 SV=1","S","Function unknown","PREDICTED: calcium uniporter protein 6, mitochondrial [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra015852","Bra015852",20.817396,6158,11.014228,3300,12.510501,3404,9.904649,2085,7.844583,1543,5.388258,1057,{"v":3.73056211018829e-05,"d":"3.73E-05"},-1.44947259279029,"down","--","--","--","--","--","[R]","General function prediction only","--","Auxilin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=AUL1 PE=2 SV=2","S","Function unknown","PREDICTED: auxilin-like protein 1 isoform X2 [Brassica rapa]","--"]
["Bra039328","Bra039328",2.128972,211,2.474449,248,2.829643,259,8.029594,563,39.808571,2683,42.34687,2872,{"v":2.05085666778045e-06,"d":"2.05E-06"},2.83768681227802,"up","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: tryptophan catabolic process (GO:0006569);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to bacterium (GO:0009617);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: monoterpenoid biosynthetic process (GO:0016099);; Biological Process: diterpenoid biosynthetic process (GO:0016102);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Molecular Function: ent-cassa-12,15-diene 11-hydroxylase activity (GO:0036202);; Biological Process: cellular response to water deprivation (GO:0042631);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: innate immune response (GO:0045087);; Biological Process: oxidation-reduction process (GO:0055114);; ","K20556|0|brp:103866219|K20556 cytochrome P450 family 76 subfamily C | (RefSeq) cytochrome P450 76C2-like","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 76C2 OS=Arabidopsis thaliana OX=3702 GN=CYP76C2 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 76C2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376)"]
["Bra013535","Bra013535",1.425893,155,0.660282,60,0.621527,67,3.038724,242,5.019086,342,4.421621,324,0.00024870564188172,1.62992663468775,"up","--","--","Molecular Function: transcription factor activity, RNA polymerase II transcription factor binding (GO:0001076);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: flower development (GO:0009908);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: somatic embryogenesis (GO:0010262);; Biological Process: seed oilbody biogenesis (GO:0010344);; Biological Process: seed maturation (GO:0010431);; Biological Process: positive regulation of auxin biosynthetic process (GO:0010601);; Biological Process: cell growth (GO:0016049);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: mitochondria-nucleus signaling pathway (GO:0031930);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: root development (GO:0048364);; Biological Process: leaf development (GO:0048366);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: anatomical structure arrangement (GO:0048532);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: developmental growth (GO:0048589);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: regulation of reproductive process (GO:2000241);; ","--","--","--","--","B3 DNA binding domain","B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana OX=3702 GN=VAL3 PE=4 SV=3","K","Transcription","PREDICTED: B3 domain-containing transcription factor VAL3 isoform X3 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: protein binding transcription factor activity (GO:0000988);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: growth (GO:0040007);; biological process: metabolic process (GO:0008152)"]
["Bra002835","Bra002835",12.687754,722,12.538915,732,12.992639,671,10.061131,388,6.801983,260,7.295304,278,{"v":9.74681045438295e-07,"d":"9.75E-07"},-1.24223215471234,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nuclear envelope (GO:0005635);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: nucleus organization (GO:0006997);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: cell plate (GO:0009504);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: transmitting tissue development (GO:0010500);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","--","--","--","--","--","WPP domain-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1","S","Function unknown","PREDICTED: WPP domain-interacting protein 2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501)"]
["Bra034568","Bra034568",3.017369,125,2.477868,103,2.997953,117,0.493566,12,0.338621,9,0.756868,20,{"v":7.32912943794245e-10,"d":"7.33E-10"},-2.99196661254874,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: lipid transport (GO:0006869);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","--","Probable lipid transfer;; Protease inhibitor/seed storage/LTP family","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103834475 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra009708","Bra009708",40.596274,2126,36.732102,2156,41.492036,2213,6.707194,210,7.276937,185,10.872782,316,{"v":1.58271160404996e-28,"d":"1.58E-28"},-3.20145544001998,"down","--","--","Biological Process: metal ion transport (GO:0030001);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","[P]","Inorganic ion transport and metabolism","--","Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1","S","Function unknown","PREDICTED: nucleolar protein 58-like [Brassica oleracea var. oleracea] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra010928","Bra010928",6.014669,516,16.240108,1472,17.533416,1478,5.990117,364,1.256643,74,1.892314,112,0.000311381153032857,-2.53300204215537,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: O-acetyltransferase activity (GO:0016413);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: external encapsulating structure organization (GO:0045229);; Molecular Function: taxadien-5-alpha-ol O-acetyltransferase activity (GO:0050638);; Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734);; Biological Process: response to stimulus (GO:0050896);; Biological Process: biological regulation (GO:0065007);; ","--","--","--","--","Transferase family","Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana OX=3702 GN=HHT1 PE=1 SV=1","S","Function unknown","PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra023727","Bra023727",24.258578,3456,39.481304,5657,44.666059,5818,16.874217,1667,10.928898,1029,12.694633,1248,{"v":1.30715678779939e-07,"d":"1.31E-07"},-1.96219577017248,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphate ion transport (GO:0006817);; Biological Process: iron ion transport (GO:0006826);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Molecular Function: phosphate ion transmembrane transporter activity (GO:0015114);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: phosphate ion transmembrane transport (GO:0035435);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: cellular response to cold (GO:0070417);; Biological Process: regulation of seed development (GO:0080050);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","EXS family;; SPX domain","Phosphate transporter PHO1 OS=Arabidopsis thaliana OX=3702 GN=PHO1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: phosphate transporter PHO1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Bra026713","Bra026713",1.657017,78,0.940943,56,1.446586,72,8.767451,378,9.240723,382,10.734024,436,{"v":9.53612423519995e-21,"d":"9.54E-21"},2.45815474651767,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: mitotic spindle assembly checkpoint (GO:0007094);; Biological Process: response to UV-B (GO:0010224);; ","K13728|8.70186e-152|brp:103842842|K13728 mitotic spindle assembly checkpoint protein MAD2B | (RefSeq) DNA polymerase zeta processivity subunit","--","[D]","Cell cycle control, cell division, chromosome partitioning","HORMA domain","DNA polymerase zeta processivity subunit OS=Arabidopsis thaliana OX=3702 GN=REV7 PE=2 SV=1","K","Transcription","PREDICTED: DNA polymerase zeta processivity subunit [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra037258","Bra037258",10.472173,1635,26.099335,4193,29.591149,4208,11.388414,1253,17.712962,1489,12.84774,1241,0.00421476968191973,-1.38157499913307,"down","--",null,"Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: defense response to oomycetes (GO:0002229);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: early endosome (GO:0005769);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: DNA replication (GO:0006260);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: actin filament organization (GO:0007015);; Biological Process: cell death (GO:0008219);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: embryo sac cellularization (GO:0009558);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: histone modification (GO:0016570);; Molecular Function: amino acid binding (GO:0016597);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: regulation of anatomical structure morphogenesis (GO:0022603);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: cell development (GO:0048468);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: regulation of developmental growth (GO:0048638);; Biological Process: anther development (GO:0048653);; Biological Process: regulation of cellular component organization (GO:0051128);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: protein complex subunit organization (GO:0071822);; Biological Process: regulation of defense response to fungus (GO:1900150);; Biological Process: regulation of defense response to bacterium (GO:1900424);; Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);; Biological Process: regulation of stem cell division (GO:2000035);; Biological Process: regulation of post-embryonic root development (GO:2000069);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase STY8 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra005104","Bra005104",58.233395,5175,133.353912,11958,166.863983,13716,30.444984,1914,17.908594,1084,22.741743,1275,{"v":3.6371573003427e-09,"d":"3.64E-09"},-2.84008852101377,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: camalexin biosynthetic process (GO:0010120);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: positive regulation of autophagy (GO:0010508);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular heat acclimation (GO:0070370);; ","K13424|0|brp:103867101|K13424 WRKY transcription factor 33 | (RefSeq) probable WRKY transcription factor 33","Plant-pathogen interaction (ko04626)","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 PE=1 SV=2","K","Transcription","PREDICTED: probable WRKY transcription factor 33 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra012103","Bra012103",0.896759,124,0.849188,72,0.700062,55,2.496475,281,1.20915,175,1.709328,187,0.00193430468594672,1.30129299831206,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103829566 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra030885","Bra030885",2.149569,154,1.06009,77,1.931255,112,4.237861,205,6.122875,286,5.755954,273,0.00371758964327413,1.09780815536215,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: RNA binding (GO:0003723);; Molecular Function: ribonuclease III activity (GO:0004525);; Cellular Component: nucleus (GO:0005634);; Biological Process: RNA processing (GO:0006396);; Cellular Component: chloroplast (GO:0009507);; ","K11145|4.94544e-129|brp:103832611|K11145 ribonuclease III family protein [EC:3.1.26.-] | (RefSeq) mini-ribonuclease 3","--","--","--","Ribonuclease III domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103832611 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra022655","Bra022655",6.516449,468,8.81268,569,7.491242,495,20.109989,985,34.326735,1994,44.465397,2023,{"v":2.66555519420108e-05,"d":"2.67E-05"},1.60900741586408,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA repair (GO:0006281);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: response to sucrose (GO:0009744);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: far-red light signaling pathway (GO:0010018);; Biological Process: negative regulation of photomorphogenesis (GO:0010100);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: red light signaling pathway (GO:0010161);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of protein localization (GO:0032880);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);; ","--","--","--","--","CCT motif","Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2","S","Function unknown","zinc finger protein CONSTANS-LIKE 9-like isoform X1 [Brassica napus]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra012688","Bra012688",4.835758,3411,7.98246,5749,8.530646,5505,4.178207,2051,3.452029,1681,3.201309,1539,{"v":1.06158055894403e-05,"d":"1.06E-05"},-1.53055815627459,"down","[K]","Transcription","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to auxin (GO:0009733);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to ozone (GO:0010193);; Molecular Function: LRR domain binding (GO:0030275);; Molecular Function: ADP binding (GO:0043531);; Biological Process: single-organism transport (GO:0044765);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","TIR domain;; Leucine Rich Repeat;; NB-ARC domain;; TIR domain;; Leucine Rich repeats (2 copies);; Leucine rich repeat","Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=SNC1 PE=1 SV=5","S","Function unknown","PREDICTED: disease resistance protein RPP4-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra019677","Bra019677",4.817997,325,15.188511,1043,17.760989,1117,4.598732,221,3.924154,181,1.393659,66,0.000404356847307094,-2.33481568982071,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","--","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily","2-oxoglutarate-dependent dioxygenase DAO OS=Oryza sativa subsp. japonica OX=39947 GN=DAO PE=2 SV=2","S","Function unknown","PREDICTED: 2-oxoglutarate-dependent dioxygenase DAO-like [Brassica rapa]","--"]
["Bra040546","Bra040546",18.740625,2950,3.480983,551,3.890825,569,3.240885,364,3.024945,319,3.285686,353,0.00469993156715941,-1.7941899970472,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Molecular Function: protein self-association (GO:0043621);; ","--","--","--","--","Sieve element occlusion C-terminus;; Sieve element occlusion N-terminus","Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 SV=1","--","--","PREDICTED: protein SIEVE ELEMENT OCCLUSION A [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra018346","Bra018346",143.040237,9880,229.314072,15983,222.038223,14187,93.559395,4572,66.141396,3111,62.745338,2970,{"v":1.07686788102006e-08,"d":"1.08E-08"},-1.95260793328415,"down","[T]","Signal transduction mechanisms","--","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana OX=3702 GN=At2g30020 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 25 [Brassica rapa] ","--"]
["Bra011773","Bra011773",3.702976,328,4.57568,402,4.399371,358,13.509285,864,38.430497,2306,39.044124,2406,{"v":1.42575659212167e-06,"d":"1.43E-06"},2.21608107119229,"up","[C]","Energy production and conversion","Molecular Function: formamidase activity (GO:0004328);; Cellular Component: vacuole (GO:0005773);; Biological Process: metabolic process (GO:0008152);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: regulation of defense response (GO:0031347);; ","K01455|0|brp:103858933|K01455 formamidase [EC:3.5.1.49] | (RefSeq) formamidase-like","Cyanoamino acid metabolism (ko00460);; Glyoxylate and dicarboxylate metabolism (ko00630);; Nitrogen metabolism (ko00910);; Carbon metabolism (ko01200)","--","--","Acetamidase/Formamidase family","--","C","Energy production and conversion","PREDICTED: uncharacterized protein LOC103858933 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007)"]
["Bra005543","Bra005543",35.968325,5323,30.315182,4436,33.782762,4492,24.543346,2513,20.855561,2119,20.65557,2163,{"v":5.20301252377457e-16,"d":"5.20E-16"},-1.11378758071001,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: nuclease activity (GO:0004518);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Cellular Component: cytoplasmic part (GO:0044444);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","[R]","General function prediction only","Zinc finger C-x8-C-x5-C-x3-H type (and similar);; Torus domain;; RNA-binding, Nab2-type zinc finger","Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=ZFN2 PE=1 SV=1","S","Function unknown","PREDICTED: zinc finger CCCH domain-containing protein 26-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: rhythmic process (GO:0048511)"]
["Bra021488","Bra021488",9.323413,602,19.706367,1288,16.227841,959,4.5932,207,1.624065,73,1.825474,84,{"v":8.44361549872383e-08,"d":"8.44E-08"},-2.90074412902374,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: lignin metabolic process (GO:0009808);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: heme binding (GO:0020037);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: lateral root development (GO:0048527);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00430|0|brp:103842763|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 27-like","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 27 OS=Arabidopsis thaliana OX=3702 GN=PER27 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 27-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704)"]
["Bra023066","Bra023066",0.65579,49,0.648825,51,0.220097,17,2.615265,142,5.829092,297,4.56951,247,{"v":1.30752063669348e-05,"d":"1.31E-05"},2.40196916493963,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818);; Biological Process: response to deep water (GO:0030912);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: primary metabolic process (GO:0044238);; Molecular Function: protein phosphorylated amino acid binding (GO:0045309);; Biological Process: root development (GO:0048364);; Biological Process: leaf development (GO:0048366);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: regulation of nematode larval development (GO:0061062);; ","--","--","--","--","WRC;; QLQ","Growth-regulating factor 4 OS=Arabidopsis thaliana OX=3702 GN=GRF4 PE=1 SV=1","K","Transcription","PREDICTED: growth-regulating factor 3-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra026425","Bra026425",0.9627,177,1.641842,308,2.397113,406,0.614109,80,0.481821,61,0.444804,60,{"v":1.36273152140268e-05,"d":"1.36E-05"},-2.15488293132391,"down","[K]","Transcription","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: nucleotide binding (GO:0000166);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: immune response (GO:0006955);; Biological Process: signal transduction (GO:0007165);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to hormone (GO:0009725);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: seed maturation (GO:0010431);; Biological Process: microsporocyte differentiation (GO:0010480);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: beta-amylase activity (GO:0016161);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Molecular Function: signaling receptor activity (GO:0038023);; Molecular Function: protein self-association (GO:0043621);; Biological Process: gametophyte development (GO:0048229);; Biological Process: embryonic meristem development (GO:0048508);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: anther development (GO:0048653);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: regulation of reproductive process (GO:2000241);; ","--","--","--","--","Leucine rich repeat;; Protein kinase domain;; Protein tyrosine kinase;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","LRR receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana OX=3702 GN=RGI3 PE=1 SV=1","S","Function unknown","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: immune system process (GO:0002376);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089)"]
["Bra025227","Bra025227",0.960355,93,0.710043,69,0.772124,69,3.36669,229,2.927303,192,3.75191,247,{"v":1.381813955758e-07,"d":"1.38E-07"},1.47091566168366,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: phosphatidylinositol biosynthetic process (GO:0006661);; ","--","--","--","--","HECT-like Ubiquitin-conjugating enzyme (E2)-binding","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103875274 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Brassica_rapa_newGene_12923","--",1.376383,97,1.336711,94,1.53946,99,6.739316,325,7.556677,357,5.88584,287,{"v":1.90672484020758e-10,"d":"1.91E-10"},1.6644723280807,"up","--","--","Cellular Component: peroxisome (GO:0005777);; Biological Process: regulation of gene expression (GO:0010468);; ","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103873391 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra017831","Bra017831",8.533733,386,14.772214,674,14.987893,627,6.23649,200,0.34661,11,0.722024,23,0.0056866572920565,-2.50647671105536,"down","--","--","Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: simple leaf morphogenesis (GO:0060776);; ","--","--","--","--","Lateral organ boundaries (LOB) domain","LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1","--","--","PREDICTED: LOB domain-containing protein 39-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Brassica_rapa_newGene_17892","--",6.533289,459,15.108964,981,13.862366,794,0,0,0,0,0,0,{"v":1.27118974436693e-28,"d":"1.27E-28"},-9.38169923718647,"down","[G]","Carbohydrate transport and metabolism","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: thioglucosidase activity (GO:0019137);; ","K01237|0|brp:103832840|K01237 myrosinase [EC:3.2.1.147] | (RefSeq) myrosinase 4","Tryptophan metabolism (ko00380)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1;; Glycosyl hydrolase family 1","Myrosinase 4 OS=Arabidopsis thaliana OX=3702 GN=TGG4 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: myrosinase 4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra037181","Bra037181",84.751588,11414,83.971505,12450,95.20227,12081,29.827478,4034,31.951415,4206,35.006644,4090,{"v":4.01324907832328e-19,"d":"4.01E-19"},-1.59614898881729,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: actin binding (GO:0003779);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: Arp2/3 protein complex (GO:0005885);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: actin filament polymerization (GO:0030041);; Biological Process: protein autophosphorylation (GO:0046777);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","K13412|0|brp:103837675|K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 28","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; EF hand;; EF hand;; EF-hand domain;; EF-hand domain pair;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region","Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CPK28 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: calcium-dependent protein kinase 28 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra016205","Bra016205",62.982766,6663,55.325007,6030,61.096067,5965,37.958739,2822,23.376658,1745,25.179483,1706,{"v":1.19036454481952e-09,"d":"1.19E-09"},-1.60889444491869,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calcium-dependent protein serine/threonine phosphatase activity (GO:0004723);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ion transport (GO:0006811);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to organic substance (GO:0010033);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: nitrogen compound transport (GO:0071705);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Salt stress response/antifungal","Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1","T","Signal transduction mechanisms","cysteine-rich receptor-like protein kinase 3 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra036163","Bra036163",2.185338,92,1.871163,80,1.989118,78,0.94379,28,0.276538,8,0.780772,23,0.000748163005596008,-2.00691990381426,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: cellular process (GO:0009987);; Biological Process: innate immune response (GO:0045087);; ","--","--","--","--","Cleavage site for pathogenic type III effector avirulence factor Avr","RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1","S","Function unknown","PREDICTED: RPM1-interacting protein 4-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896)"]
["Bra020199","Bra020199",1.905482,176,1.697347,180,2.338227,220,1.548437,114,0.80695,62,0.868486,85,0.00420372529535548,-1.18132044557125,"down","--","--","Biological Process: meiosis I (GO:0007127);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; ","--","--","--","--","FBD;; F-box domain;; F-box-like;; Leucine Rich Repeat","FBD-associated F-box protein At5g44490 OS=Arabidopsis thaliana OX=3702 GN=At5g44490 PE=2 SV=3","S","Function unknown","BnaA02g05760D [Brassica napus]","biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152)"]
["Bra019110","Bra019110",0.836534,53,0.561358,38,0.453018,34,1.803257,82,2.629241,127,3.683335,169,0.00144161601573345,1.50883997476012,"up","[K]","Transcription","--","--","--","--","--","NusB family","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103861623 [Brassica rapa]","--"]
["Bra021603","Bra021603",114.960022,15356,204.829595,27713,188.868984,23445,53.839881,5092,33.54312,2778,33.425248,2799,{"v":3.35965584979722e-11,"d":"3.36E-11"},-2.65032030123406,"down","[T]","Signal transduction mechanisms","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cell plate assembly (GO:0000919);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nuclear pore (GO:0005643);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosol (GO:0005829);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: DNA replication (GO:0006260);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: vesicle budding from membrane (GO:0006900);; Biological Process: signal transduction (GO:0007165);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: stomatal complex development (GO:0010374);; Biological Process: gene silencing (GO:0016458);; Biological Process: histone modification (GO:0016570);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: macromolecule methylation (GO:0043414);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: innate immune response (GO:0045087);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: protein complex subunit organization (GO:0071822);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Protein kinase domain;; Protein tyrosine kinase;; WD domain, G-beta repeat;; Anaphase-promoting complex subunit 4 WD40 domain","Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","BnaA04g17210D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra037280","Bra037280",30.806788,4060,19.386689,2578,20.430788,2487,15.29648,1430,8.584103,773,6.477242,597,{"v":1.32580224816129e-05,"d":"1.33E-05"},-1.69373682248448,"down","[T]","Signal transduction mechanisms","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: probable serine/threonine-protein kinase NAK [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra014144","Bra014144",1.843463,222,1.211692,150,1.739539,197,0,0,0,0,0,0,{"v":2.08637223542094e-18,"d":"2.09E-18"},-7.80944761405052,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: binding (GO:0005488);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: iron ion transport (GO:0006826);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cell growth (GO:0016049);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Molecular Function: oxygen binding (GO:0019825);; Biological Process: cellular component morphogenesis (GO:0032989);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: lateral root development (GO:0048527);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: phyllome development (GO:0048827);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: thalianol metabolic process (GO:0080003);; Molecular Function: thalianol hydroxylase activity (GO:0080014);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Cytochrome P450 708A2 OS=Arabidopsis thaliana OX=3702 GN=CYP708A2 PE=2 SV=3","Q","Secondary metabolites biosynthesis, transport and catabolism","BnaA08g03170D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007)"]
["Bra004949","Bra004949",4.569966,322,7.889389,647,7.443302,606,1.731213,99,3.046531,149,1.86548,142,{"v":8.30477866575249e-06,"d":"8.30E-06"},-2.02675023488104,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to salt stress (GO:0009651);; Biological Process: detection of brassinosteroid stimulus (GO:0009729);; Biological Process: response to auxin (GO:0009733);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: positive regulation of protein export from nucleus (GO:0046827);; Biological Process: root hair elongation (GO:0048767);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Skp1 family, dimerisation domain;; Skp1 family, tetramerisation domain","SKP1-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=ASK20 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: LOW QUALITY PROTEIN: SKP1-like protein 20 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991)"]
["Brassica_rapa_newGene_28728","--",1.045348,73,1.510058,106,1.372339,88,0.269562,14,0.086273,5,0.268653,13,{"v":7.27998786150763e-07,"d":"7.28E-07"},-2.93424456289814,"down","[X]","Mobilome: prophages, transposons","--","--","--","[R]","General function prediction only","--","--","L","Replication, recombination and repair","uncharacterized protein LOC106436174 [Brassica napus]","--"]
["Bra028082","Bra028082",1.05093,71,0.349301,27,0.492418,35,2.704453,119,4.942795,210,5.209197,229,0.000162675770454463,1.96643478367563,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: cysteine biosynthetic process (GO:0019344);; ","--","--","[R]","General function prediction only","Dienelactone hydrolase family","Endo-1,3;1,4-beta-D-glucanase OS=Zea mays OX=4577 PE=1 SV=1","S","Function unknown","PREDICTED: carboxymethylenebutenolidase homolog [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987)"]
["Bra029869","Bra029869",49.07148,1895,81.973854,3194,68.958618,2463,59.708977,1631,38.293499,1007,39.389378,1043,0.00350955095790181,-1.09030863076863,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: mitochondrion (GO:0005739);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: mRNA transcription (GO:0009299);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to salt stress (GO:0009651);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: response to chitin (GO:0010200);; Cellular Component: integral component of plastid membrane (GO:0031351);; Molecular Function: ubiquitin conjugating enzyme binding (GO:0031624);; Biological Process: negative regulation of organ growth (GO:0046621);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of response to osmotic stress (GO:0047484);; Biological Process: floral organ development (GO:0048437);; Biological Process: protein autoubiquitination (GO:0051865);; ","K11982|1.81992e-134|brp:103870432|K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase RHC1A","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-like zinc finger;; RING-type zinc-finger;; Zinc finger, C3HC4 type (RING finger);; Rad50 zinc hook motif","Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425)"]
["Bra003625","Bra003625",0.386688,65,0.543366,98,0.21082,33,1.809413,209,2.003947,209,2.02561,224,0.000782455132571222,1.6091740061549,"up","[S]","Function unknown","Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein folding (GO:0006457);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: phototropism (GO:0009638);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: cellular process (GO:0009987);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Cellular Component: membrane (GO:0016020);; Molecular Function: heat shock protein binding (GO:0031072);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: response to chemical (GO:0042221);; Molecular Function: unfolded protein binding (GO:0051082);; ","K09534|0|brp:103830500|K09534 DnaJ homolog subfamily C member 14 | (RefSeq) SP5; uncharacterized LOC103830500","--","[O]","Posttranslational modification, protein turnover, chaperones","Cleavage inducing molecular chaperone;; DnaJ domain","Chaperone protein dnaJ 39 OS=Arabidopsis thaliana OX=3702 GN=ATJ39 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103830500 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020)"]
["Bra023502","Bra023502",12.899205,1145,8.215479,731,8.601665,713,26.973503,1686,34.322497,2069,28.218163,1747,{"v":2.55270780292023e-06,"d":"2.55E-06"},1.05109248799444,"up","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: microtubule nucleation (GO:0007020);; Molecular Function: acetylglucosaminyltransferase activity (GO:0008375);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Molecular Function: protein xylosyltransferase activity (GO:0030158);; ","K20891|0|brp:103850965|K20891 beta-glucuronosyltransferase [EC:2.4.1.-] | (RefSeq) beta-glucuronosyltransferase GlcAT14B","--","[G]","Carbohydrate transport and metabolism","Core-2/I-Branching enzyme","Beta-glucuronosyltransferase GlcAT14B OS=Arabidopsis thaliana OX=3702 GN=GLCAT14B PE=2 SV=1","S","Function unknown","PREDICTED: beta-glucuronosyltransferase GlcAT14B [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra021440","Bra021440",13.837012,438,10.901375,348,12.060716,353,9.037359,203,7.503537,162,9.719419,211,{"v":7.2922631194377e-06,"d":"7.29E-06"},-1.02020840055693,"down","[T]","Signal transduction mechanisms","Biological Process: response to molecule of fungal origin (GO:0002238);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; ","--","--","--","--","Universal stress protein family","Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2","T","Signal transduction mechanisms","universal stress protein A-like protein [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra014948","Bra014948",27.458268,5356,16.803517,3290,17.792386,3202,10.408607,1384,6.574838,873,6.143257,794,{"v":1.1324820533296e-10,"d":"1.13E-10"},-1.95540091368037,"down","--","--","--","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","EXS family;; SPX domain","Phosphate transporter PHO1 OS=Arabidopsis thaliana OX=3702 GN=PHO1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: phosphate transporter PHO1 isoform X1 [Brassica rapa]","--"]
["Bra011899","Bra011899",70.664512,3979,69.2288,3926,66.435711,3522,36.971213,1491,19.485127,782,15.17844,616,{"v":1.05313038213372e-07,"d":"1.05E-07"},-1.99303517191582,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: sexual reproduction (GO:0019953);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: expansin-like A2 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra027397","Bra027397",128.906319,19037,227.254159,37583,209.381508,32338,113.089987,15179,62.820436,6582,67.553283,7096,0.000563600509166799,-1.65241148358087,"down","[G]","Carbohydrate transport and metabolism","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: beta-fructofuranosidase activity (GO:0004564);; Molecular Function: sucrose alpha-glucosidase activity (GO:0004575);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: sucrose biosynthetic process (GO:0005986);; Biological Process: sucrose catabolic process (GO:0005987);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to wounding (GO:0009611);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: actin filament-based movement (GO:0030048);; Molecular Function: levanase activity (GO:0031219);; Biological Process: nectar secretion (GO:0071836);; Biological Process: response to karrikin (GO:0080167);; ","K01193|0|brp:103870093|K01193 beta-fructofuranosidase [EC:3.2.1.26] | (RefSeq) beta-fructofuranosidase, insoluble isoenzyme CWINV1","Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolases family 32 N-terminal domain;; Glycosyl hydrolases family 32 C terminal","Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana OX=3702 GN=CWINV1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Brassica_rapa_newGene_22321","--",1.62076,82,3.384261,171,1.824277,85,0.105629,4,0.059852,3,0,0,{"v":2.56452117235478e-10,"d":"2.56E-10"},-4.93762870587427,"down","--","--","--","--","--","[R]","General function prediction only","Retrotransposon gag protein","--","L","Replication, recombination and repair","uncharacterized protein LOC111203242 [Brassica napus]","--"]
["Bra040372","Bra040372",3.221014,220,9.042259,624,10.642129,673,0.311331,16,0.139952,7,0,0,{"v":9.87992275804925e-10,"d":"9.88E-10"},-5.22102340412831,"down","--","--","Biological Process: maltose metabolic process (GO:0000023);; Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: positive regulation of catalytic activity (GO:0043085);; ","--","--","--","--","Protein of unknown function (DUF760)","UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g17800 PE=2 SV=1","S","Function unknown","PREDICTED: UV-B-induced protein At3g17800, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Brassica_rapa_newGene_21382","--",0.025149,7,0.008307,3,0,0,0.404264,70,0.677096,112,1.759419,292,{"v":6.27576737225006e-08,"d":"6.28E-08"},4.70608177386899,"up","--","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","--","Alkane hydroxylase MAH1 OS=Arabidopsis thaliana OX=3702 GN=CYP96A15 PE=2 SV=1","T","Signal transduction mechanisms","BnaA04g14020D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra003965","Bra003965",5.04157,374,13.170881,986,12.233489,839,0.634826,34,0.691066,35,1.331029,68,{"v":8.46944095634623e-13,"d":"8.47E-13"},-3.87793128908336,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: metalloendopeptidase activity (GO:0004222);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to chitin (GO:0010200);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Cellular Component: extracellular matrix (GO:0031012);; Cellular Component: anchored component of membrane (GO:0031225);; ","--","--","[OW]","Posttranslational modification, protein turnover, chaperones;; Extracellular structures","Matrixin;; Putative peptidoglycan binding domain","Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: metalloendoproteinase 2-MMP [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: extracellular matrix (GO:0031012);; cellular component: membrane part (GO:0044425)"]
["Brassica_rapa_newGene_13078","--",0.162527,6,0.217664,9,0.41831,15,2.852437,74,3.585648,90,4.244827,107,{"v":1.28125776480611e-06,"d":"1.28E-06"},2.89119535953067,"up","--","--","Molecular Function: transcription corepressor activity (GO:0003714);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to wounding (GO:0009611);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; ","--","--","--","--","--","Protein TIFY 8 OS=Arabidopsis thaliana OX=3702 GN=TIFY8 PE=1 SV=1","S","Function unknown","BnaA06g19630D [Brassica napus]","biological process: biological regulation (GO:0065007);; molecular function: protein binding transcription factor activity (GO:0000988);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra024615","Bra024615",13.068983,721,22.405906,1242,22.773127,1183,7.454981,294,1.209252,50,1.136934,48,0.000116389976583572,-2.80779133681419,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: carbonate dehydratase activity (GO:0004089);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: carbon utilization (GO:0015976);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; ","K01673|8.55487e-178|brp:103840738|K01673 carbonic anhydrase [EC:4.2.1.1] | (RefSeq) beta carbonic anhydrase 3","Nitrogen metabolism (ko00910)","[P]","Inorganic ion transport and metabolism","Carbonic anhydrase","Beta carbonic anhydrase 3 OS=Arabidopsis thaliana OX=3702 GN=BCA3 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: beta carbonic anhydrase 3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987)"]
["Bra022880","Bra022880",63.016513,10517,49.610818,8369,53.898327,8336,38.712723,4578,27.990521,3203,32.563073,3730,{"v":1.51987345590472e-11,"d":"1.52E-11"},-1.28010965407614,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: organelle organization (GO:0006996);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: flower development (GO:0009908);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: response to cadmium ion (GO:0046686);; ","--","--","--","--","--","--","--","--","PREDICTED: restin homolog [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422)"]
["Bra037811","Bra037811",460.956696,13057,669.35144,19133,499.088043,13078,192.567612,3859,162.689514,3139,169.522888,3291,{"v":9.33652456226184e-17,"d":"9.34E-17"},-2.17437860424832,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to chitin (GO:0010200);; Biological Process: intracellular signal transduction (GO:0035556);; ","--","--","--","--","Protein of unknown function (DUF740)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837570 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra017052","Bra017052",154.246083,11427,148.343789,11087,141.688876,9781,126.653379,6481,60.711395,3098,63.099928,3207,0.000116577559340527,-1.36460410695225,"down","[JM]","Translation, ribosomal structure and biogenesis;; Cell wall/membrane/envelope biogenesis","Molecular Function: mannose-1-phosphate guanylyltransferase activity (GO:0004475);; Molecular Function: protein binding (GO:0005515);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: cytoskeleton organization (GO:0007010);; Molecular Function: mannose-1-phosphate guanylyltransferase (GDP) activity (GO:0008928);; Biological Process: GDP-mannose biosynthetic process (GO:0009298);; Biological Process: response to heat (GO:0009408);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: response to ozone (GO:0010193);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Biological Process: L-ascorbic acid biosynthetic process (GO:0019853);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: response to ammonium ion (GO:0060359);; ","K00966|0|brp:103865745|K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] | (RefSeq) mannose-1-phosphate guanylyltransferase 1","Fructose and mannose metabolism (ko00051);; Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","Nucleotidyl transferase;; MobA-like NTP transferase domain;; Bacterial transferase hexapeptide (six repeats)","Mannose-1-phosphate guanylyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=CYT1 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: mannose-1-phosphate guanylyltransferase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra011820","Bra011820",2.992651,246,1.632897,171,0.851527,81,6.306004,477,5.491659,316,6.694343,462,0.00395406843297341,1.28416508345215,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: protein folding (GO:0006457);; Biological Process: response to heat (GO:0009408);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: phototropism (GO:0009638);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: phloem or xylem histogenesis (GO:0010087);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);; Biological Process: mRNA modification (GO:0016556);; Molecular Function: heat shock protein binding (GO:0031072);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: leaf development (GO:0048366);; Molecular Function: unfolded protein binding (GO:0051082);; ","K03686|0|brp:103854064|K03686 molecular chaperone DnaJ | (RefSeq) chaperone protein dnaJ A6, chloroplastic","--","[O]","Posttranslational modification, protein turnover, chaperones","DnaJ C terminal domain;; DnaJ domain;; DnaJ central domain;; PPR repeat","Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJA6 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: chaperone protein dnaJ A6, chloroplastic isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra024569","Bra024569",1.649104,176,1.923202,208,1.53925,152,0.080468,7,0,0,0,0,{"v":2.36398487699411e-09,"d":"2.36E-09"},-5.24696735991047,"down","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: extracellular region (GO:0005576);; Biological Process: catabolic process (GO:0009056);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of metabolic process (GO:0019222);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cell wall modification (GO:0042545);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PME6 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable pectinesterase/pectinesterase inhibitor 6 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra018590","Bra018590",2.420559,137,4.649892,263,1.818709,96,19.404823,749,20.000312,744,18.351179,687,{"v":3.99549382409722e-06,"d":"4.00E-06"},2.01472431635893,"up","[G]","Carbohydrate transport and metabolism","--","--","--","--","--","Histidine phosphatase superfamily (branch 1)","Phosphoglycerate mutase-like protein AT74H OS=Arabidopsis thaliana OX=3702 GN=At1g08940 PE=3 SV=2","T","Signal transduction mechanisms","PREDICTED: phosphoglycerate mutase-like protein AT74H [Brassica rapa]","--"]
["Bra029755","Bra029755",16.362645,2561,30.468738,3748,29.753085,3269,0.204005,34,0.672661,102,0.33871,59,{"v":1.27937053091907e-34,"d":"1.28E-34"},-5.47254839146817,"down","[G]","Carbohydrate transport and metabolism","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protease binding (GO:0002020);; Molecular Function: glucan exo-1,3-beta-glucosidase activity (GO:0004338);; Molecular Function: beta-galactosidase activity (GO:0004565);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum lumen (GO:0005788);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: ion transport (GO:0006811);; Biological Process: aging (GO:0007568);; Molecular Function: beta-glucosidase activity (GO:0008422);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: coumarin metabolic process (GO:0009804);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: ER body (GO:0010168);; Biological Process: pollen exine formation (GO:0010584);; Biological Process: tetracyclic triterpenoid biosynthetic process (GO:0010686);; Molecular Function: fucosidase activity (GO:0015928);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: membrane organization (GO:0016044);; Molecular Function: thioglucosidase activity (GO:0019137);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: beta-D-fucosidase activity (GO:0033907);; Biological Process: peptidyl-tyrosine dephosphorylation (GO:0035335);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Biological Process: intracellular transport (GO:0046907);; Molecular Function: beta-L-arabinosidase activity (GO:0047701);; Biological Process: petal morphogenesis (GO:0048446);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: phosphatidylinositol phosphate phosphatase activity (GO:0052866);; Biological Process: regulation of biological quality (GO:0065008);; Molecular Function: phosphatidic acid binding (GO:0070300);; Biological Process: cellular response to cold (GO:0070417);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to salt stress (GO:0071472);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Molecular Function: baruol synthase activity (GO:0080011);; Molecular Function: beta-gentiobiose beta-glucosidase activity (GO:0080083);; Biological Process: ER body organization (GO:0080119);; Biological Process: response to karrikin (GO:0080167);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K01188|0|brp:103870764|K01188 beta-glucosidase [EC:3.2.1.21] | (RefSeq) beta-glucosidase 23-like","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Beta-glucosidase 23 OS=Arabidopsis thaliana OX=3702 GN=BGLU23 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-glucosidase 23-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414)"]
["Bra029165","Bra029165",12.783869,531,15.48056,649,16.439266,632,4.320534,127,3.638711,103,4.380527,125,{"v":1.8248159294417e-17,"d":"1.82E-17"},-2.38652644050273,"down","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC108871119 [Brassica rapa] ","--"]
["Bra035882","Bra035882",14.040967,665,20.129463,962,16.982895,744,10.983591,368,8.090051,261,6.431026,209,{"v":1.33839647050417e-05,"d":"1.34E-05"},-1.53765739606504,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Protein of unknown function (DUF1645)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837426 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra008581","Bra008581",4.706415,334,2.6619,188,2.192384,180,7.763658,389,8.007596,542,13.602518,640,0.00170655906335727,1.1215776983414,"up","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: actin cytoskeleton organization (GO:0030036);; Biological Process: actin filament-based movement (GO:0030048);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: terpene metabolic process (GO:0042214);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: (+)-pulegone reductase, (+)-isomenthone as substrate, activity (GO:0052579);; Molecular Function: (+)-pulegone reductase, (-)-menthone as substrate, activity (GO:0052580);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: NADPH binding (GO:0070402);; ","K08070|0|brp:103846278|K08070 2-alkenal reductase [EC:1.3.1.74] | (RefSeq) NADP-dependent alkenal double bond reductase P2","--","[R]","General function prediction only","Zinc-binding dehydrogenase;; N-terminal domain of oxidoreductase;; Zinc-binding dehydrogenase","NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana OX=3702 GN=P2 PE=2 SV=2","S","Function unknown","PREDICTED: NADP-dependent alkenal double bond reductase P2 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824)"]
["Bra010309","Bra010309",2.194401,121,2.182939,122,2.70883,139,6.741384,261,9.063107,338,11.091711,418,0.000122789168531862,1.32514831496207,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103834695 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra032246","Bra032246",6.435744,765,4.479636,519,4.087959,453,2.975724,261,2.143977,172,4.173022,338,0.00104894242863654,-1.17446966942977,"down","[T]","Signal transduction mechanisms","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to nutrient (GO:0007584);; Cellular Component: plastid (GO:0009536);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to glucose (GO:0009749);; Biological Process: potassium ion import (GO:0010107);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to nitrate (GO:0010167);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root development (GO:0048364);; ","K07198|0|brp:103868685|K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11] | (RefSeq) CBL-interacting serine/threonine-protein kinase 17-like","Regulation of autophagy (ko04140)","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; NAF domain","CBL-interacting serine/threonine-protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CIPK17 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: CBL-interacting serine/threonine-protein kinase 17-like [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra034954","Bra034954",0.248738,12,0,0,0.263682,14,2.131328,85,1.50873,57,2.853863,110,0.00639549780800929,2.64065364914945,"up","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; ","K14488|1.90339e-114|brp:103848025|K14488 SAUR family protein | (RefSeq) auxin-responsive protein SAUR71","Plant hormone signal transduction (ko04075)","--","--","Auxin responsive protein","Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1","S","Function unknown","PREDICTED: auxin-responsive protein SAUR71 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra015904","Bra015904",6.018962,211,2.75486,98,3.07971,100,36.968239,914,51.890068,1235,54.535629,1306,{"v":5.59419841676797e-18,"d":"5.59E-18"},3.00304869916027,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; ","K17279|1.26768e-130|brp:103831926|K17279 receptor expression-enhancing protein 5/6 | (RefSeq) HVA22-like protein a","--","[U]","Intracellular trafficking, secretion, and vesicular transport","TB2/DP1, HVA22 family","HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: HVA22-like protein a [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra029435","Bra029435",247.63089,8456,256.784546,8849,242.179276,7650,199.951187,4831,172.42012,4010,164.700073,3854,{"v":4.22769518557887e-09,"d":"4.23E-09"},-1.02520709364231,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to chitin (GO:0010200);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[R]","General function prediction only","A20-like zinc finger;; AN1-like Zinc finger","Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana OX=3702 GN=SAP7 PE=1 SV=1","S","Function unknown","PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 7-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra029671","Bra029671",7.268422,859,22.641365,2699,16.554216,1809,3.495418,293,3.504581,282,4.185545,339,{"v":1.95437408437453e-07,"d":"1.95E-07"},-2.53692793505556,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: glucosinolate catabolic process (GO:0019762);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: nitrile biosynthetic process (GO:0080028);; Biological Process: proteasome core complex assembly (GO:0080129);; ","--","--","[R]","General function prediction only","Galactose oxidase, central domain;; Galactose oxidase, central domain","Nitrile-specifier protein 5 OS=Arabidopsis thaliana OX=3702 GN=NSP5 PE=2 SV=1","S","Function unknown","PREDICTED: nitrile-specifier protein 5 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra005242","Bra005242",2.041202,197,3.653982,356,3.359452,300,13.939029,951,9.979211,656,18.921106,1251,0.000160998492914593,1.6124560942985,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: chloroplast (GO:0009507);; Biological Process: response to UV-B (GO:0010224);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Molecular Function: trans-zeatin O-beta-D-glucosyltransferase activity (GO:0050403);; Molecular Function: cis-zeatin O-beta-D-glucosyltransferase activity (GO:0050502);; Biological Process: flavonol biosynthetic process (GO:0051555);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: quercetin 4'-O-glucosyltransferase activity (GO:0080046);; ","K13496|0|brp:103867256|K13496 UDP-glucosyl transferase 73C [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 73C5-like","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 73C5 OS=Arabidopsis thaliana OX=3702 GN=UGT73C5 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 73C5-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra036589","Bra036589",15.983325,270,27.583492,470,24.877888,389,9.983371,120,2.952041,34,2.493929,29,{"v":9.78000940059101e-05,"d":"9.78E-05"},-2.51609173885732,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837137 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra038815","Bra038815",2.043696,245,2.067658,250,1.802553,200,6.199384,525,8.318004,678,6.411816,526,{"v":1.74956436790513e-07,"d":"1.75E-07"},1.2554272148772,"up","[U]","Intracellular trafficking, secretion, and vesicular transport","Molecular Function: protein binding (GO:0005515);; Biological Process: DNA-templated transcription, elongation (GO:0006354);; Biological Process: protein secretion (GO:0009306);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: cyanelle (GO:0009842);; Biological Process: thylakoid membrane organization (GO:0010027);; Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450);; Cellular Component: integral component of membrane (GO:0016021);; ","K10956|0|brp:103828373|K10956 protein transport protein SEC61 subunit alpha | (RefSeq) preprotein translocase subunit SCY1, chloroplastic","Protein export (ko03060);; Protein processing in endoplasmic reticulum (ko04141);; Phagosome (ko04145)","--","--","SecY translocase","Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SCY1 PE=1 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: preprotein translocase subunit SCY1, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Bra040278","Bra040278",5.245709,228,4.667097,205,2.613602,106,10.907602,336,15.807031,468,16.173527,482,0.00124607104095916,1.20551739104895,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: defense response (GO:0006952);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: cellular response to organic cyclic compound (GO:0071407);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","--","Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH148-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052)"]
["Bra014742","Bra014742",35.818487,3204,48.042464,4360,43.637011,3760,23.812219,1566,19.814462,1296,13.406683,946,{"v":1.32341371406228e-07,"d":"1.32E-07"},-1.61701254801936,"down","[T]","Signal transduction mechanisms","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PBL1 OS=Arabidopsis thaliana OX=3702 GN=PBL1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable receptor-like protein kinase At3g55450 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra016767","Bra016767",1.902484,101,3.1943,171,3.03811,151,0,0,0,0,0,0,{"v":4.14833203839175e-15,"d":"4.15E-15"},-7.31686779084466,"down","--","--","Molecular Function: structural constituent of cell wall (GO:0005199);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: syncytium formation (GO:0006949);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Biological Process: plant-type cell wall modification involved in multidimensional cell growth (GO:0009831);; Biological Process: response to red light (GO:0010114);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: petal morphogenesis (GO:0048446);; Biological Process: root hair elongation (GO:0048767);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-A7 OS=Arabidopsis thaliana OX=3702 GN=EXPA7 PE=3 SV=1","G","Carbohydrate transport and metabolism","expansin-A7 [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra022842","Bra022842",1.580754,175,2.422524,268,2.65002,267,6.068353,469,6.993401,513,7.46095,552,0.00475073681448699,1.01163776183336,"up","[L]","Replication, recombination and repair","Molecular Function: DNA binding (GO:0003677);; Molecular Function: endonuclease activity (GO:0004519);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: base-excision repair (GO:0006284);; Molecular Function: lyase activity (GO:0016829);; Molecular Function: DNA N-glycosylase activity (GO:0019104);; Cellular Component: chloroplast nucleoid (GO:0042644);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K10773|0|brp:103857374|K10773 endonuclease III [EC:4.2.99.18] | (RefSeq) endonuclease III homolog 1, chloroplastic","Base excision repair (ko03410)","[L]","Replication, recombination and repair","HhH-GPD superfamily base excision DNA repair protein;; Helix-hairpin-helix motif","Endonuclease III homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH1 PE=2 SV=2","L","Replication, recombination and repair","PREDICTED: endonuclease III homolog 1, chloroplastic isoform X9 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: nucleoid (GO:0009295);; cellular component: organelle part (GO:0044422)"]
["Bra006808","Bra006808",1.492835,43,0.925253,27,1.442144,39,6.690502,135,10.892927,212,7.075044,139,{"v":1.59093408922487e-06,"d":"1.59E-06"},2.04519230654119,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to virus (GO:0009615);; Biological Process: glutamine secretion (GO:0010585);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: modulation by virus of host morphology or physiology (GO:0019048);; Biological Process: secretion by cell (GO:0032940);; Biological Process: regulation of amino acid export (GO:0080143);; ","--","--","--","--","--","Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana OX=3702 GN=GDU3 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: protein GLUTAMINE DUMPER 3-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Bra030072","Bra030072",1.504366,170,1.000442,138,1.91902,187,4.931558,385,4.202989,341,4.811509,398,{"v":7.15879828072372e-05,"d":"7.16E-05"},1.10856584403998,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: nucleus (GO:0005634);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; ","--","--","--","--","--","Protein NEOXANTHIN-DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=NDX1 PE=2 SV=1","S","Function unknown","PREDICTED: protein NEOXANTHIN-DEFICIENT 1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra022723","Bra022723",538.479065,13790,794.855103,20542,623.048645,14761,232.79808,4218,149.842834,2614,151.439178,2658,{"v":6.42034981521954e-14,"d":"6.42E-14"},-2.39629397784884,"down","--","--","Molecular Function: copper ion binding (GO:0005507);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: enzyme regulator activity (GO:0030234);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: organelle localization (GO:0051640);; Biological Process: response to karrikin (GO:0080167);; ","K16465|6.81985e-82|brp:103851959|K16465 centrin-1 | (RefSeq) calcium-binding protein PBP1-like","--","[ZD]","Cytoskeleton;; Cell cycle control, cell division, chromosome partitioning","EF-hand domain pair","Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calcium-binding protein PBP1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: enzyme regulator activity (GO:0030234);; biological process: localization (GO:0051179)"]
["Bra040176","Bra040176",1.690508,273,0.584032,89,0.846634,98,4.566588,675,5.541179,576,4.413464,549,{"v":2.80058792049764e-05,"d":"2.80E-05"},1.90670049438289,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: rRNA processing (GO:0006364);; Biological Process: regulation of translation (GO:0006417);; Biological Process: signal transduction (GO:0007165);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: adaxial/abaxial axis specification (GO:0009943);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: regulation of root meristem growth (GO:0010082);; Biological Process: abaxial cell fate specification (GO:0010158);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: transcription from plastid promoter (GO:0042793);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: seed development (GO:0048316);; Biological Process: carpel development (GO:0048440);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: integument development (GO:0080060);; ","--","--","--","--","Myb-like DNA-binding domain","Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1","K","Transcription","PREDICTED: probable transcription factor KAN3 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414)"]
["Bra032727","Bra032727",0.102304,11,0.008117,2,0.01684,3,1.018719,63,2.463165,139,2.213669,123,{"v":6.85795681576519e-08,"d":"6.86E-08"},3.9151504798587,"up","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: metabolic process (GO:0008152);; Cellular Component: plastid chromosome (GO:0009508);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: heat shock protein binding (GO:0031072);; Molecular Function: unfolded protein binding (GO:0051082);; ","--","--","--","--","Putative peptidoglycan binding domain","Protein disulfide isomerase pTAC5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC5 PE=1 SV=1","S","Function unknown","PREDICTED: golgin subfamily A member 6-like protein 22 [Brassica rapa]","biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488)"]
["Bra030511","Bra030511",0.584217,66,1.655982,188,1.463895,152,0,0,0.128073,10,0.026425,3,{"v":4.96378282826813e-06,"d":"4.96E-06"},-4.17034424732969,"down","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: extracellular region (GO:0005576);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: proline transport (GO:0015824);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; ","K01051|0|brp:103836641|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase/pectinesterase inhibitor 7","Pentose and glucuronate interconversions (ko00040);; Starch and sucrose metabolism (ko00500)","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana OX=3702 GN=PME7 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable pectinesterase/pectinesterase inhibitor 7 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra039774","Bra039774",3.979612,303,4.490046,345,5.76969,406,3.335058,180,4.026651,209,2.121084,111,0.00611046403311334,-1.11922008950298,"down","[K]","Transcription","Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: defense response (GO:0006952);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to bacterium (GO:0009617);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: seed maturation (GO:0010431);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single-organism transport (GO:0044765);; Biological Process: meristem development (GO:0048507);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: lateral root development (GO:0048527);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: phyllome development (GO:0048827);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Uncharacterized protein At4g06744 OS=Arabidopsis thaliana OX=3702 GN=At4g06744 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At4g06744 isoform X1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: reproduction (GO:0000003);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179)"]
["Bra039627","Bra039627",17.823448,1349,10.820568,829,10.976527,769,32.287064,1729,45.660217,2353,50.561085,2622,{"v":6.79251480716451e-05,"d":"6.79E-05"},1.14908161442338,"up","[CP]","Energy production and conversion;; Inorganic ion transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: inorganic diphosphatase activity (GO:0004427);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: defense response (GO:0006952);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; Biological Process: response to chemical (GO:0042221);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K01507|7.44702e-155|brp:103828410|K01507 inorganic pyrophosphatase [EC:3.6.1.1] | (RefSeq) soluble inorganic pyrophosphatase 2","Oxidative phosphorylation (ko00190)","[C]","Energy production and conversion","Inorganic pyrophosphatase","Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=PPA2 PE=2 SV=2","C","Energy production and conversion","soluble inorganic pyrophosphatase 2-like isoform X1 [Brassica napus]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra013868","Bra013868",0.330404,64,1.098894,186,0.902108,162,0,0,0,0,0,0,{"v":3.5485416674543e-13,"d":"3.55E-13"},-7.05043742101537,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: response to molecule of fungal origin (GO:0002238);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to stress (GO:0006950);; Cellular Component: chloroplast (GO:0009507);; Biological Process: regulation of asymmetric cell division (GO:0009786);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Cellular Component: cell surface (GO:0009986);; Biological Process: response to organic substance (GO:0010033);; Biological Process: lateral root formation (GO:0010311);; Biological Process: cellular component organization (GO:0016043);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: endocytic vesicle (GO:0030139);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: developmental growth (GO:0048589);; Biological Process: root cap development (GO:0048829);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; U-box domain;; Universal stress protein family","U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: U-box domain-containing protein 35 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007)"]
["Bra007162","Bra007162",151.206589,13231,69.53019,6140,61.698765,4995,16.503481,1022,10.137469,605,5.747639,345,{"v":2.83162403401908e-13,"d":"2.83E-13"},-3.48192932540177,"down","--","--","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: cell communication (GO:0007154);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: response to chitin (GO:0010200);; Biological Process: gene silencing (GO:0016458);; Biological Process: covalent chromatin modification (GO:0016569);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: shoot system development (GO:0048367);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: nucleic acid metabolic process (GO:0090304);; ","--","--","--","--","Glycosyl hydrolases family 17;; X8 domain","Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1","G","Carbohydrate transport and metabolism","BnaA09g35010D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414)"]
["Bra032157","Bra032157",0.229506,16,0.136226,10,0.430104,27,1.317957,62,6.927349,310,4.941736,220,{"v":3.11501383754194e-05,"d":"3.12E-05"},3.06839130546852,"up","[HR]","Coenzyme transport and metabolism;; General function prediction only","Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: response to wounding (GO:0009611);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: salicylic acid metabolic process (GO:0009696);; Biological Process: response to fructose (GO:0009750);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: glycoside catabolic process (GO:0016139);; Molecular Function: lipase activity (GO:0016298);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: mandelonitrile lyase activity (GO:0046593);; Molecular Function: methyl indole-3-acetate esterase activity (GO:0080030);; Molecular Function: methyl salicylate esterase activity (GO:0080031);; Molecular Function: methyl jasmonate esterase activity (GO:0080032);; ","K08233|0|brp:103864478|K08233 polyneuridine-aldehyde esterase [EC:3.1.1.78] | (RefSeq) methylesterase 4-like","--","--","--","Alpha/beta hydrolase family;; alpha/beta hydrolase fold;; Serine aminopeptidase, S33;; Putative serine esterase (DUF676)","Methylesterase 4 OS=Arabidopsis thaliana OX=3702 GN=MES4 PE=1 SV=1","S","Function unknown","PREDICTED: methylesterase 4-like isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra000121","Bra000121",2.031059,279,7.331285,1004,8.332655,1036,0.936332,83,0.449088,38,1.721192,147,{"v":1.71458008317108e-05,"d":"1.71E-05"},-2.95292604557636,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: root hair elongation (GO:0048767);; ","K08472|7.90471e-102|brp:103857849|K08472 mlo protein | (RefSeq) MLO-like protein 12","--","--","--","Mlo family","MLO-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=MLO12 PE=2 SV=2","--","--","PREDICTED: MLO-like protein 12 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane part (GO:0044425)"]
["Bra008366","Bra008366",0.98163,252,0.422096,110,0.300531,72,1.995625,362,6.329545,1104,4.912412,862,{"v":6.95243339637871e-05,"d":"6.95E-05"},2.30228616964315,"up","[G]","Carbohydrate transport and metabolism","Biological Process: response to singlet oxygen (GO:0000304);; Molecular Function: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity (GO:0003825);; Molecular Function: trehalose-phosphatase activity (GO:0004805);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: diterpenoid biosynthetic process (GO:0016102);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: animal organ development (GO:0048513);; Biological Process: cell division (GO:0051301);; Molecular Function: (E,E)-geranyllinalool synthase activity (GO:0080013);; Biological Process: response to herbivore (GO:0080027);; ","K16055|0|bna:106345849|K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] | (RefSeq) alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1","Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Glycosyltransferase family 20;; Trehalose-phosphatase","Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana OX=3702 GN=TPS1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra017222","Bra017222",125.04657,6114,275.32608,13584,252.74971,11432,56.720211,1962,107.219124,3570,100.312561,3361,{"v":5.85851652657571e-05,"d":"5.86E-05"},-1.82739211837094,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: protein storage vacuole (GO:0000326);; Cellular Component: cell wall (GO:0005618);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: autophagy (GO:0006914);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Biological Process: response to salt stress (GO:0009651);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: methylammonium transmembrane transporter activity (GO:0015200);; Molecular Function: urea transmembrane transporter activity (GO:0015204);; Molecular Function: water channel activity (GO:0015250);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: water homeostasis (GO:0030104);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: central vacuole (GO:0042807);; Cellular Component: columella (GO:0043674);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: ammonium transmembrane transporter activity (GO:0051739);; Biological Process: urea transmembrane transport (GO:0071918);; Biological Process: hydrogen peroxide transmembrane transport (GO:0080170);; ","K09873|3.28305e-163|brp:103865561|K09873 aquaporin TIP | (RefSeq) aquaporin TIP1-1","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Aquaporin TIP1-1 OS=Arabidopsis thaliana OX=3702 GN=TIP1-1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: aquaporin TIP1-1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular matrix (GO:0031012);; cellular component: extracellular matrix part (GO:0044420)"]
["Bra020592","Bra020592",6.996047,657,4.525093,483,5.542198,434,2.573868,170,2.782004,185,3.993777,267,{"v":4.67015896004103e-06,"d":"4.67E-06"},-1.35133894503962,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: response to nitrate (GO:0010167);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: nitrate transport (GO:0015706);; Biological Process: monosaccharide transport (GO:0015749);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: glucose homeostasis (GO:0042593);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana OX=3702 GN=SFP2 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: sugar transporter ERD6-like 18 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra007705","Bra007705",91.946046,10730,103.39538,12184,88.843905,9576,38.835795,3201,30.935828,2447,28.213694,2256,{"v":4.51186484575791e-21,"d":"4.51E-21"},-2.07794482244271,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Molecular Function: racemase and epimerase activity, acting on carbohydrates and derivatives (GO:0016857);; Biological Process: dTDP-rhamnose biosynthetic process (GO:0019305);; Biological Process: D-xylose metabolic process (GO:0042732);; Molecular Function: UDP-glucuronate decarboxylase activity (GO:0048040);; Molecular Function: coenzyme binding (GO:0050662);; ","K08678|0|bna:106420509|K08678 UDP-glucuronate decarboxylase [EC:4.1.1.35] | (RefSeq) UDP-glucuronic acid decarboxylase 2-like","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[GM]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; Male sterility protein;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; RmlD substrate binding domain","UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra024291","Bra024291",1.149386,91,0.953802,77,1.100853,81,2.213869,124,6.371579,343,5.834757,316,0.00262360741217503,1.53988698907875,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: fructose-2,6-bisphosphate 2-phosphatase activity (GO:0004331);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose biosynthetic process (GO:0005986);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: defense response (GO:0006952);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to fructose (GO:0009750);; Biological Process: mRNA modification (GO:0016556);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: hexose metabolic process (GO:0019318);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: fructose 1,6-bisphosphate metabolic process (GO:0030388);; Molecular Function: fructose 1,6-bisphosphate 1-phosphatase activity (GO:0042132);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: plastid part (GO:0044435);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: establishment of localization (GO:0051234);; Biological Process: response to other organism (GO:0051707);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","K03841|0|brp:103873862|K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] | (RefSeq) fructose-1,6-bisphosphatase, cytosolic","Glycolysis / Gluconeogenesis (ko00010);; Pentose phosphate pathway (ko00030);; Fructose and mannose metabolism (ko00051);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","Fructose-1-6-bisphosphatase, N-terminal domain","Fructose-1,6-bisphosphatase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra014225","Bra014225",7.697988,676,7.849363,695,8.487513,689,3.313614,206,2.759664,165,4.852211,292,{"v":1.27764261924535e-07,"d":"1.28E-07"},-1.66544044701703,"down","--","--","Biological Process: metabolic process (GO:0008152);; Cellular Component: chloroplast (GO:0009507);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to UV-B (GO:0010224);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Molecular Function: UDP-xylosyltransferase activity (GO:0035252);; Biological Process: pigmentation (GO:0043473);; Biological Process: cyanidin 3-O-glucoside metabolic process (GO:1901038);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 79B5 OS=Arabidopsis thaliana OX=3702 GN=UGT79B5 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 79B5-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)"]
["Bra017351","Bra017351",9.760078,482,6.130837,306,6.693845,306,0.522876,19,0.239721,9,0,0,{"v":7.78739325168703e-09,"d":"7.79E-09"},-4.63844506205335,"down","--","--","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: stromule (GO:0010319);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: allene-oxide cyclase activity (GO:0046423);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition (GO:0052542);; ","K10525|0|brp:103839362|K10525 allene oxide cyclase [EC:5.3.99.6] | (RefSeq) allene oxide cyclase 2, chloroplastic-like","alpha-Linolenic acid metabolism (ko00592)","--","--","Allene oxide cyclase","Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AOC2 PE=1 SV=1","S","Function unknown","PREDICTED: allene oxide cyclase 2, chloroplastic-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704)"]
["Bra033596","Bra033596",2.249743,187,1.683626,139,1.899168,142,9.408605,553,8.541441,503,6.359876,352,{"v":9.12099220435513e-08,"d":"9.12E-08"},1.5244429025288,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: RNA binding (GO:0003723);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: chromatin organization (GO:0006325);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: gene silencing (GO:0016458);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: negative regulation of gene expression, epigenetic (GO:0045814);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to stimulus (GO:0050896);; ","K07574|2.81784e-86|brp:103828066|K07574 RNA-binding protein | (RefSeq) transcriptional regulator Myc-2","--","--","--","CRS1 / YhbY (CRM) domain","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: transcriptional regulator Myc-2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Bra024192","Bra024192",13.900579,3174,15.188769,3495,11.934718,2546,10.516319,1704,8.548781,1332,9.106811,1481,{"v":1.22412725707123e-07,"d":"1.22E-07"},-1.07162228316625,"down","[S]","Function unknown","Molecular Function: DNA binding (GO:0003677);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA repair (GO:0006281);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: DNA mediated transformation (GO:0009294);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: response to gamma radiation (GO:0010332);; Biological Process: histone modification (GO:0016570);; Biological Process: cell cycle process (GO:0022402);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: response to lipid (GO:0033993);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule methylation (GO:0043414);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: double-strand break repair via synthesis-dependent strand annealing (GO:0045003);; Biological Process: root development (GO:0048364);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: reproductive structure development (GO:0048608);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K10841|0|brp:103861842|K10841 DNA excision repair protein ERCC-6 | (RefSeq) protein CHROMATIN REMODELING 8","Nucleotide excision repair (ko03420)","[KL]","Transcription;; Replication, recombination and repair","SNF2 family N-terminal domain;; Helicase conserved C-terminal domain","Protein CHROMATIN REMODELING 8 OS=Arabidopsis thaliana OX=3702 GN=CHR8 PE=2 SV=1","L","Replication, recombination and repair","PREDICTED: protein CHROMATIN REMODELING 8 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra014871","Bra014871",66.880119,11168,72.797134,12290,70.226437,10866,51.26094,6049,47.081327,5363,40.05689,4607,{"v":5.47331886987369e-09,"d":"5.47E-09"},-1.15108908214362,"down","[I]","Lipid transport and metabolism","--","K01115|0|brp:103828818|K01115 phospholipase D1/2 [EC:3.1.4.4] | (RefSeq) phospholipase D gamma 1","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565);; Endocytosis (ko04144)","[I]","Lipid transport and metabolism","Phospholipase D C terminal;; C2 domain;; Phospholipase D Active site motif;; PLD-like domain","Phospholipase D gamma 1 OS=Arabidopsis thaliana OX=3702 GN=PLDGAMMA1 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: phospholipase D gamma 1 isoform X1 [Brassica rapa]","--"]
["Bra031763","Bra031763",178.577133,30754,302.934082,52646,346.530701,55207,90.628265,11042,49.095749,5758,53.456802,6309,{"v":3.67525862719156e-10,"d":"3.68E-10"},-2.59791861148931,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; ","K08472|0|brp:103843245|K08472 mlo protein | (RefSeq) MLO1; MLO-like protein 2","--","--","--","Mlo family","MLO-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=MLO2 PE=1 SV=1","--","--","MLO-like protein 2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007)"]
["Bra025305","Bra025305",1.143504,43,0.702412,27,1.191735,41,4.326628,113,5.160289,130,4.43306,112,{"v":5.37962582649972e-05,"d":"5.38E-05"},1.58602287262508,"up","[J]","Translation, ribosomal structure and biogenesis","Cellular Component: plastid large ribosomal subunit (GO:0000311);; Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: DNA-templated transcription, elongation (GO:0006354);; Biological Process: translation (GO:0006412);; Cellular Component: nucleoid (GO:0009295);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: defense response to bacterium (GO:0042742);; ","K02935|5.61038e-75|brp:103875187|K02935 large subunit ribosomal protein L7/L12 | (RefSeq) 50S ribosomal protein L12-1, chloroplastic-like","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein L7/L12 C-terminal domain;; Ribosomal protein L7/L12 dimerisation domain","50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: 50S ribosomal protein L12-1, chloroplastic-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: nucleoid (GO:0009295);; cellular component: cell junction (GO:0030054);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra025707","Bra025707",157.625916,2630,223.028,3756,210.531708,3250,88.972305,1051,67.808746,771,83.264313,952,{"v":8.53053517977604e-11,"d":"8.53E-11"},-1.8431926371147,"down","--","--","Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to chitin (GO:0010200);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[L]","Replication, recombination and repair","--","--","J","Translation, ribosomal structure and biogenesis","PREDICTED: uncharacterized protein LOC103872706 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra024274","Bra024274",1.336876,59,1.136307,51,1.895111,62,8.044104,250,12.879453,298,15.276696,359,{"v":1.25775565143019e-12,"d":"1.26E-12"},2.30084685446566,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: myosin heavy chain, muscle [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000553","Bra000553",5.991432,679,12.871526,1475,12.058319,1295,7.548037,633,7.091508,520,4.320983,339,0.00820478105865985,-1.25614404906476,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Sulfite exporter TauE/SafE","Sulfite exporter TauE/SafE family protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g25737 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103858367 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra035148","Bra035148",757.532166,44238,683.241821,40264,731.942017,39541,421.840576,17428,312.462219,12427,322.70578,12914,{"v":4.45333918931642e-16,"d":"4.45E-16"},-1.58010241550998,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to absence of light (GO:0009646);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of defense response to virus by host (GO:0050691);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 40 OS=Arabidopsis thaliana OX=3702 GN=WRKY40 PE=1 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 40 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra016860","Bra016860",111.615517,5306,178.957306,8584,149.855911,6590,73.185745,2461,53.705257,1739,65.900078,2147,{"v":2.80315516472521e-08,"d":"2.80E-08"},-1.73477245257559,"down","--","--","--","--","--","--","--","Protein of unknown function (DUF1685)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103865964 [Brassica rapa] ","--"]
["Bra008751","Bra008751",2.299613,406,2.286295,376,2.609273,408,7.19681,928,7.165092,912,6.609948,856,{"v":1.63656521971672e-09,"d":"1.64E-09"},1.11647809857502,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175);; Biological Process: mitochondrial RNA catabolic process (GO:0000957);; Biological Process: mitochondrial RNA processing (GO:0000963);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: mRNA processing (GO:0006397);; Biological Process: mRNA catabolic process (GO:0006402);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0010323);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: carotene biosynthetic process (GO:0016120);; Biological Process: xanthophyll biosynthetic process (GO:0016123);; Biological Process: chloroplast RNA processing (GO:0031425);; Biological Process: ncRNA processing (GO:0034470);; Biological Process: transcription factor import into nucleus (GO:0042991);; ","K00962|0|brp:103846477|K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] | (RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like","Purine metabolism (ko00230);; Pyrimidine metabolism (ko00240);; RNA degradation (ko03018)","[R]","General function prediction only","3' exoribonuclease family, domain 1;; 3' exoribonuclease family, domain 2;; Polyribonucleotide nucleotidyltransferase, RNA binding domain;; S1 RNA binding domain","Polyribonucleotide nucleotidyltransferase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNP2 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179)"]
["Bra038677","Bra038677",371.494368,17466,302.908874,14720,293.849189,15160,146.071695,5920,73.846975,2232,74.20282,2205,{"v":6.22333507887839e-07,"d":"6.22E-07"},-2.17659439051135,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","--","--","LURP-one-related","Protein LURP-one-related 10 OS=Arabidopsis thaliana OX=3702 GN=At3g11740 PE=2 SV=2","S","Function unknown","PREDICTED: protein LURP-one-related 10 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704)"]
["Bra036058","Bra036058",5.931094,484,6.596489,538,6.368498,476,20.80897,1203,41.211154,2348,40.601222,2246,{"v":9.73716832084298e-08,"d":"9.74E-08"},1.85914185458472,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: aging (GO:0007568);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: response to ethylene (GO:0009723);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: response to organic substance (GO:0010033);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: system development (GO:0048731);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Probable 2-oxoglutarate-dependent dioxygenase At3g50210 OS=Arabidopsis thaliana OX=3702 GN=At3g50210 PE=2 SV=1","S","Function unknown","PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra015381","Bra015381",0.470823,59,1.176711,147,1.720826,198,0.456336,40,0.190294,17,0.163707,14,0.00105673832460374,-2.38436587373278,"down","--","--","Molecular Function: 1-phosphatidylinositol binding (GO:0005545);; Cellular Component: nucleus (GO:0005634);; Cellular Component: clathrin coat (GO:0030118);; Molecular Function: clathrin binding (GO:0030276);; Biological Process: clathrin coat assembly (GO:0048268);; ","--","--","[TU]","Signal transduction mechanisms;; Intracellular trafficking, secretion, and vesicular transport","ANTH domain","Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana OX=3702 GN=AP180 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: clathrin coat assembly protein AP180 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra010492","Bra010492",40.710888,1738,99.101013,4269,96.885254,3826,14.502069,438,7.942818,231,9.328925,273,{"v":2.02654627066267e-12,"d":"2.03E-12"},-3.34381367148098,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Protein of unknown function (DUF679)","Protein DMP3 OS=Arabidopsis thaliana OX=3702 GN=DMP3 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC106310839 [Brassica oleracea var. oleracea] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra011221","Bra011221",56.454342,6243,82.173409,9171,84.471916,8642,35.667652,2791,33.492545,2603,25.5807,1939,{"v":1.47273097838746e-08,"d":"1.47E-08"},-1.76225124337663,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103852376 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra029374","Bra029374",2.257261,283,1.700088,218,1.634764,194,5.129078,466,5.811357,511,6.398969,561,{"v":1.63339695791307e-07,"d":"1.63E-07"},1.10134251813787,"up","--","--","Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: single-organism process (GO:0044699);; ","--","--","[K]","Transcription","Plus-3 domain;; SWIB/MDM2 domain;; GYF domain","Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2","S","Function unknown","PREDICTED: uncharacterized protein At5g08430 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra024646","Bra024646",4.701937,712,8.068673,1250,7.176445,1031,2.337076,262,2.432804,258,2.040587,201,{"v":6.10986163991228e-09,"d":"6.11E-09"},-2.08562306846215,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","HEAT repeat;; HEAT repeats;; HEAT-like repeat","TORTIFOLIA1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOR1L4 PE=2 SV=1","S","Function unknown","PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X4 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra035881","Bra035881",2.030767,183,1.174754,110,1.028857,88,6.382619,414,9.553351,597,7.087562,447,{"v":3.03661037594633e-08,"d":"3.04E-08"},1.88248650547159,"up","[I]","Lipid transport and metabolism","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: isomerase activity (GO:0016853);; Biological Process: regulation of lipid metabolic process (GO:0019216);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity (GO:0030604);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: NADPH binding (GO:0070402);; ","K00099|0|brp:103837427|K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] | (RefSeq) 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic","Terpenoid backbone biosynthesis (ko00900)","--","--","1-deoxy-D-xylulose 5-phosphate reductoisomerase;; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal;; DXP reductoisomerase C-terminal domain","1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DXR PE=2 SV=2","I","Lipid transport and metabolism","PREDICTED: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra029519","Bra029519",1.084809,110,0.993571,103,1.20243,101,3.381651,266,3.784311,356,3.950608,375,{"v":3.04389062522589e-08,"d":"3.04E-08"},1.59424687697223,"up","[P]","Inorganic ion transport and metabolism","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: response to singlet oxygen (GO:0000304);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: peptide-methionine (S)-S-oxide reductase activity (GO:0008113);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: regulation of proton transport (GO:0010155);; Molecular Function: potassium:proton antiporter activity (GO:0015386);; Biological Process: monovalent inorganic cation transport (GO:0015672);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: metal ion transport (GO:0030001);; Molecular Function: peptide-methionine (R)-S-oxide reductase activity (GO:0033743);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: potassium ion transmembrane transport (GO:0071805);; ","--","--","[P]","Inorganic ion transport and metabolism","Sodium/hydrogen exchanger family;; TrkA-N domain;; SelR domain","K(+) efflux antiporter 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KEA3 PE=1 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: K(+) efflux antiporter 3, chloroplastic [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Bra031627","Bra031627",19.403354,2137,19.65296,2236,16.440323,1667,16.305933,1245,12.521474,931,11.673554,847,{"v":1.25293231393658e-05,"d":"1.25E-05"},-1.03839634119567,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum lumen (GO:0005788);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein folding (GO:0006457);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to heat (GO:0009408);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: defense response signaling pathway, resistance gene-independent (GO:0010204);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Molecular Function: unfolded protein binding (GO:0051082);; Biological Process: sequestering of calcium ion (GO:0051208);; Biological Process: calcium ion homeostasis (GO:0055074);; ","K08057|0|brp:103843398|K08057 calreticulin | (RefSeq) calreticulin-3-like","Protein processing in endoplasmic reticulum (ko04141);; Phagosome (ko04145)","[O]","Posttranslational modification, protein turnover, chaperones","Calreticulin family","Calreticulin-3 OS=Arabidopsis thaliana OX=3702 GN=CRT3 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: calreticulin-3-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576);; biological process: localization (GO:0051179)"]
["Bra007295","Bra007295",1.100317,73,1.695414,121,1.997608,138,6.653235,368,6.238299,251,4.214613,232,0.00942642669415411,1.22071795556208,"up","[TK]","Signal transduction mechanisms;; Transcription","Molecular Function: phosphorelay response regulator activity (GO:0000156);; Biological Process: phosphorelay signal transduction system (GO:0000160);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: red light signaling pathway (GO:0010161);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: stem cell population maintenance (GO:0019827);; Biological Process: regulation of anthocyanin metabolic process (GO:0031537);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: regulation of circadian rhythm (GO:0042752);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root development (GO:0048364);; Biological Process: regulation of developmental growth (GO:0048638);; Biological Process: regulation of shoot system development (GO:0048831);; ","K14492|2.43867e-152|brp:103841610|K14492 two-component response regulator ARR-A family | (RefSeq) two-component response regulator ARR9","Plant hormone signal transduction (ko04075)","[K]","Transcription","Response regulator receiver domain","Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1","K","Transcription","PREDICTED: two-component response regulator ARR9 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: rhythmic process (GO:0048511);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003)"]
["Bra007319","Bra007319",93.708641,32476,168.881119,59063,169.719711,54412,34.603447,8484,22.969296,5422,24.60454,5844,{"v":5.19657220860039e-15,"d":"5.20E-15"},-2.90207521814753,"down","[P]","Inorganic ion transport and metabolism","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: carbonate dehydratase activity (GO:0004089);; Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: one-carbon metabolic process (GO:0006730);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: cellular zinc ion homeostasis (GO:0006882);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to nematode (GO:0009624);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to ethylene (GO:0009723);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Molecular Function: protein self-association (GO:0043621);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: anion homeostasis (GO:0055081);; Biological Process: calcium ion transmembrane transport (GO:0070588);; ","K01537|0|brp:103841639|K01537 Ca2+-transporting ATPase [EC:3.6.3.8] | (RefSeq) putative calcium-transporting ATPase 11, plasma membrane-type","--","[P]","Inorganic ion transport and metabolism","E1-E2 ATPase;; Cation transporting ATPase, C-terminus;; haloacid dehalogenase-like hydrolase;; Cation transport ATPase (P-type);; Ca2+-ATPase N terminal autoinhibitory domain;; Cation transporter/ATPase, N-terminus;; haloacid dehalogenase-like hydrolase","Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA11 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052)"]
["Bra036882","Bra036882",247.685358,22415,348.882224,31877,325.921116,27349,132.348868,8489,104.533557,6457,97.025606,6034,{"v":8.55550515531935e-13,"d":"8.56E-13"},-2.00551879121269,"down","[P]","Inorganic ion transport and metabolism","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: sulfate assimilation (GO:0000103);; Biological Process: selenium compound metabolic process (GO:0001887);; Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to sucrose (GO:0009744);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: photorespiration (GO:0009853);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: cellular response to sulfate starvation (GO:0009970);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Cellular Component: heterotetrameric ADPG pyrophosphorylase complex (GO:0030931);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: protein trimerization (GO:0070206);; ","K13811|0|brp:103871853|K13811 3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25] | (RefSeq) ATP-sulfurylase 3, chloroplastic","Purine metabolism (ko00230);; Monobactam biosynthesis (ko00261);; Selenocompound metabolism (ko00450);; Sulfur metabolism (ko00920)","[P]","Inorganic ion transport and metabolism","ATP-sulfurylase;; PUA-like domain","ATP-sulfurylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APS3 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: ATP-sulfurylase 3, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576)"]
["Bra015894","Bra015894",0.661282,126,4.632089,692,4.893711,663,0.104554,20,0,0,0.095077,17,{"v":4.50595536151941e-06,"d":"4.51E-06"},-4.38824782624567,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: iron ion transport (GO:0006826);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; ","--","--","[R]","General function prediction only","Zinc-ribbon;; CHY zinc finger;; Hemerythrin HHE cation binding domain;; Ring finger domain","Zinc finger protein BRUTUS-like At1g74770 OS=Arabidopsis thaliana OX=3702 GN=At1g74770 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103831937 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987)"]
["Bra030725","Bra030725",39.140862,3744,47.049316,4542,50.550728,4473,34.43737,2331,18.906168,1232,21.449221,1406,{"v":3.73815275311048e-05,"d":"3.74E-05"},-1.40644018367642,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to aluminum ion (GO:0010044);; Biological Process: stomatal movement (GO:0010118);; Cellular Component: endomembrane system (GO:0012505);; Molecular Function: malate transmembrane transporter activity (GO:0015140);; Biological Process: malate transport (GO:0015743);; Biological Process: malate transmembrane transport (GO:0071423);; ","--","--","[R]","General function prediction only","Aluminium activated malate transporter;; Fusaric acid resistance protein-like;; Fusaric acid resistance protein family","Aluminum-activated malate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=ALMT1 PE=1 SV=1","S","Function unknown","PREDICTED: aluminum-activated malate transporter 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215)"]
["Bra017768","Bra017768",2.751465,185,7.526015,530,9.659614,598,3.230747,151,1.186782,65,1.863851,95,0.000923367057310318,-2.05166384352796,"down","--","--","Molecular Function: transporter activity (GO:0005215);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: transport (GO:0006810);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; ","--","--","[I]","Lipid transport and metabolism","CRAL/TRIO domain;; CRAL/TRIO, N-terminal domain","Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana OX=3702 GN=SFH11 PE=3 SV=1","S","Function unknown","PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c-like [Brassica rapa] ","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra005864","Bra005864",100.085647,11696,204.68967,24172,198.231582,21413,88.030545,7329,97.088227,7789,96.400738,7762,0.000361736111280532,-1.37838047609002,"down","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Biological Process: sulfate assimilation (GO:0000103);; Biological Process: tryptophan biosynthetic process (GO:0000162);; Biological Process: MAPK cascade (GO:0000165);; Molecular Function: anthranilate synthase activity (GO:0004049);; Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781);; Cellular Component: cytosol (GO:0005829);; Cellular Component: anthranilate synthase complex (GO:0005950);; Biological Process: threonine catabolic process (GO:0006567);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to wounding (GO:0009611);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cellular response to sulfate starvation (GO:0009970);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: lateral root formation (GO:0010311);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: indeterminate inflorescence morphogenesis (GO:0048283);; Biological Process: defense response to fungus (GO:0050832);; ","K01657|0|bna:106427871|K01657 anthranilate synthase component I [EC:4.1.3.27] | (RefSeq) anthranilate synthase alpha subunit 1, chloroplastic","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","chorismate binding enzyme;; Anthranilate synthase component I, N terminal region","Anthranilate synthase alpha subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ASA1 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: anthranilate synthase alpha subunit 1, chloroplastic isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: membrane (GO:0016020);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414)"]
["Bra021637","Bra021637",292.709904,28836,426.354769,42359,400.054603,36445,112.418259,7835,61.4123,4121,57.693346,3895,{"v":1.47399453882368e-13,"d":"1.47E-13"},-2.77100145068908,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin metabolic process (GO:0009808);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Molecular Function: trans-cinnamate 4-monooxygenase activity (GO:0016710);; Molecular Function: heme binding (GO:0020037);; Biological Process: growth (GO:0040007);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: p-coumarate 3-hydroxylase activity (GO:0046409);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity (GO:0072533);; Biological Process: response to karrikin (GO:0080167);; ","K00487|0|brp:103865043|K00487 trans-cinnamate 4-monooxygenase [EC:1.14.13.11] | (RefSeq) trans-cinnamate 4-monooxygenase-like","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Phenylalanine metabolism (ko00360);; Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana OX=3702 GN=CYP73A5 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: trans-cinnamate 4-monooxygenase-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007)"]
["Bra024318","Bra024318",185.214371,15092,220.764786,18153,189.455185,14281,96.908745,5587,76.738319,4259,74.618652,4167,{"v":7.25453227522281e-16,"d":"7.25E-16"},-1.80579028019186,"down","[D]","Cell cycle control, cell division, chromosome partitioning","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to chitin (GO:0010200);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: system development (GO:0048731);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);; ","--","--","--","--","U-box domain","U-box domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=PUB27 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: U-box domain-containing protein 27 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)"]
["Bra015832","Bra015832",0.960786,21,0.315991,7,1.412313,28,6.893914,104,19.296862,278,24.813778,360,{"v":1.48612281992246e-06,"d":"1.49E-06"},3.34132584508746,"up","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: auxin-activated signaling pathway (GO:0009734);; ","K14488|4.88132e-62|brp:103832007|K14488 SAUR family protein | (RefSeq) auxin-induced protein 15A-like","Plant hormone signal transduction (ko04075)","--","--","Auxin responsive protein","Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1","S","Function unknown","PREDICTED: auxin-induced protein 15A-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra017198","Bra017198",0.442093,100,0.844496,175,0.833263,161,0,0,0,0,0,0,{"v":3.73344956556014e-15,"d":"3.73E-15"},-7.33734005831593,"down","[T]","Signal transduction mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: auxin polar transport (GO:0009926);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: cadmium ion transmembrane transporter activity (GO:0015086);; Molecular Function: ATPase-coupled organic phosphonate transmembrane transporter activity (GO:0015416);; Biological Process: cadmium ion transport (GO:0015691);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: lupeol synthase activity (GO:0042299);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of MAP kinase activity (GO:0043407);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: root development (GO:0048364);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: cellular response to indolebutyric acid stimulus (GO:0071366);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC-2 type transporter;; ABC transporter;; Plant PDR ABC transporter associated;; AAA domain, putative AbiEii toxin, Type IV TA system;; ABC-transporter extracellular N-terminal;; RsgA GTPase;; AAA domain;; ATPase family associated with various cellular activities (AAA);; Rad17 cell cycle checkpoint protein","ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1","V","Defense mechanisms","ABC transporter G family member 33 isoform X2 [Brassica napus]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra026163","Bra026163",9.548191,935,11.73315,1045,9.074449,672,3.204797,216,2.783493,187,3.339599,203,{"v":2.22340982927053e-19,"d":"2.22E-19"},-2.15276547537529,"down","[I]","Lipid transport and metabolism","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; Molecular Function: O-methyltransferase activity (GO:0008171);; Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);; Biological Process: methylation (GO:0032259);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism process (GO:0044699);; Biological Process: response to other organism (GO:0051707);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; ","--","--","--","--","SAM dependent carboxyl methyltransferase","Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana OX=3702 GN=At5g38780 PE=2 SV=1","S","Function unknown","BnaA06g38320D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987)"]
["Bra016084","Bra016084",148.491776,16371,143.717397,15982,138.060994,14120,59.815952,4676,32.97855,2496,31.724462,2404,{"v":4.48503177864685e-13,"d":"4.49E-13"},-2.29410669878553,"down","--","--","--","--","--","[I]","Lipid transport and metabolism","CRAL/TRIO domain;; CRAL/TRIO, N-terminal domain","Patellin-1 OS=Arabidopsis thaliana OX=3702 GN=PATL1 PE=1 SV=2","S","Function unknown","PREDICTED: patellin-1-like [Brassica rapa]","--"]
["Bra002373","Bra002373",3.088118,151,1.244646,63,1.268043,61,7.275772,253,8.742714,295,8.89776,300,0.000194054381653656,1.57490741426692,"up","[S]","Function unknown","Cellular Component: plasma membrane (GO:0005886);; ","K02221|8.54463e-177|brp:103845594|K02221 YggT family protein | (RefSeq) ylmG homolog protein 2, chloroplastic","--","--","--","YGGT family","YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 PE=2 SV=1","S","Function unknown","PREDICTED: ylmG homolog protein 2, chloroplastic [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)"]
["Bra030073","Bra030073",1.611655,121,1.45836,104,1.839019,121,4.115953,215,8.786936,413,7.485133,355,0.000265774606014908,1.41845712418486,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: proteolysis (GO:0006508);; Molecular Function: omega peptidase activity (GO:0008242);; ","--","--","[S]","Function unknown","Peptidase C65 Otubain","Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana OX=3702 GN=At1g28120 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: ubiquitin thioesterase otubain-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra035821","Bra035821",3.071054,324,5.898265,629,4.740915,468,2.90135,218,2.373285,174,2.151979,165,0.000622381452323965,-1.39299002578142,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: glucokinase activity (GO:0004340);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Biological Process: glycolytic process (GO:0006096);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Molecular Function: fructokinase activity (GO:0008865);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: response to salt stress (GO:0009651);; Biological Process: hexokinase-dependent signaling (GO:0009747);; Biological Process: programmed cell death (GO:0012501);; Biological Process: phosphorylation (GO:0016310);; Biological Process: hexose catabolic process (GO:0019320);; Cellular Component: integral component of mitochondrial outer membrane (GO:0031307);; Cellular Component: plastid part (GO:0044435);; Biological Process: root hair cell development (GO:0080147);; ","K00844|0|brp:103869365|K00844 hexokinase [EC:2.7.1.1] | (RefSeq) hexokinase-4","Glycolysis / Gluconeogenesis (ko00010);; Fructose and mannose metabolism (ko00051);; Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","Hexokinase;; Hexokinase","Hexokinase-4 OS=Arabidopsis thaliana OX=3702 GN=At3g20040 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: hexokinase-4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: developmental process (GO:0032502)"]
["Bra018848","Bra018848",47.690128,4081,41.938877,3621,41.97691,3323,18.017525,1091,20.250671,1180,19.271856,1130,{"v":1.74512726090217e-50,"d":"1.75E-50"},-1.73853719787169,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: tryptophan metabolic process (GO:0006568);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: protein localization (GO:0008104);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: indole-containing compound biosynthetic process (GO:0042435);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: single-organism transport (GO:0044765);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: floral organ morphogenesis (GO:0048444);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: cell division (GO:0051301);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: reactive oxygen species metabolic process (GO:0072593);; Biological Process: organic substance catabolic process (GO:1901575);; ","--","--","--","--","GRAS domain family","Scarecrow-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SCL3 PE=1 SV=1","K","Transcription","PREDICTED: scarecrow-like protein 3 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle part (GO:0044422)"]
["Bra031924","Bra031924",21.418787,545,16.965723,436,26.412424,621,16.243052,293,7.444262,129,8.114536,142,0.000605245411264681,-1.52472025844376,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to chitin (GO:0010200);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","--","Classical arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=AGP1 PE=2 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: classical arabinogalactan protein 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152)"]
["Bra038414","Bra038414",1.058083,93,1.65781,146,1.849693,150,0.065785,5,0.046825,3,0,0,{"v":8.14704975930861e-12,"d":"8.15E-12"},-5.04901607061557,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: O-acetyltransferase activity (GO:0016413);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: xylan metabolic process (GO:0045491);; Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734);; Biological Process: biological regulation (GO:0065007);; Molecular Function: spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080072);; Molecular Function: sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080089);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","--","--","--","--","Transferase family","Spermidine sinapoyl-CoA acyltransferase OS=Arabidopsis thaliana OX=3702 GN=SDT PE=1 SV=1","S","Function unknown","PREDICTED: spermidine sinapoyl-CoA acyltransferase-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra034861","Bra034861",2.190239,217,3.558795,343,2.997844,281,0.60201,40,0,0,0.095514,9,0.000746104224403521,-3.34796053969063,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: vacuole organization (GO:0007033);; Biological Process: response to UV (GO:0009411);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: detection of bacterium (GO:0016045);; Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: flavonol synthase activity (GO:0045431);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: seed development (GO:0048316);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to karrikin (GO:0080167);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","Probable 2-oxoglutarate-dependent dioxygenase At3g111800 OS=Arabidopsis thaliana OX=3702 GN=At3g11180 PE=2 SV=1","S","Function unknown","PREDICTED: leucoanthocyanidin dioxygenase [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra017086","Bra017086",25.971356,4232,70.420755,11558,61.396967,9231,22.038608,2515,9.259608,1029,9.273985,1026,{"v":1.02547510519253e-05,"d":"1.03E-05"},-2.42277538018352,"down","--","--","--","K08472|0|brp:103865706|K08472 mlo protein | (RefSeq) MLO-like protein 12","--","--","--","Mlo family","MLO-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=MLO12 PE=2 SV=2","D","Cell cycle control, cell division, chromosome partitioning","PREDICTED: MLO-like protein 12 [Brassica rapa] ","--"]
["Bra033300","Bra033300",4.126467,386,13.550963,1244,13.285154,1146,5.677791,373,2.788687,182,3.589284,237,0.00188659463799834,-1.81244900023775,"down","--","--","Molecular Function: binding (GO:0005488);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to stress (GO:0006950);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: leaf senescence (GO:0010150);; Cellular Component: membrane (GO:0016020);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: regulation of shoot system development (GO:0048831);; Biological Process: negative regulation of developmental process (GO:0051093);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=NAC005 PE=2 SV=2","K","Transcription","PREDICTED: NAC domain-containing protein 5-like isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414)"]
["Bra040089","Bra040089",2.143729,173,1.552627,126,1.315948,98,5.37456,306,6.221107,341,5.878386,324,{"v":1.66667342209964e-06,"d":"1.67E-06"},1.24752130039112,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: response to stress (GO:0006950);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: response to far red light (GO:0010218);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single-multicellular organism process (GO:0044707);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","--","--","SWIM zinc finger","Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana OX=3702 GN=FRS9 PE=2 SV=2","S","Function unknown","PREDICTED: protein FAR1-RELATED SEQUENCE 9 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501)"]
["Bra020188","Bra020188",33.641327,1578,17.097178,831,17.405458,774,5.143419,186,2.945825,103,3.117559,108,{"v":3.04250378849172e-15,"d":"3.04E-15"},-2.94559374645231,"down","--","--","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: flower development (GO:0009908);; Biological Process: meristem initiation (GO:0010014);; Biological Process: leaf senescence (GO:0010150);; Biological Process: organ boundary specification between lateral organs and the meristem (GO:0010199);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: innate immune response (GO:0045087);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: negative regulation of response to stimulus (GO:0048585);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1","S","Function unknown","PREDICTED: NAC domain-containing protein 90 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: immune system process (GO:0002376)"]
["Bra036128","Bra036128",1.493404,42,2.02552,57,2.015752,52,7.437051,145,6.428217,121,8.278745,157,0.000331592549165679,1.38446623040653,"up","[U]","Intracellular trafficking, secretion, and vesicular transport","Biological Process: protein secretion (GO:0009306);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: proton motive force dependent protein transmembrane transporter activity (GO:0009977);; Cellular Component: integral component of thylakoid membrane (GO:0031361);; Cellular Component: TAT protein transport complex (GO:0033281);; Biological Process: protein transport by the Tat complex (GO:0043953);; Biological Process: protein import into chloroplast thylakoid membrane (GO:0045038);; ","K03116|6.72092e-65|brp:103837301|K03116 sec-independent protein translocase protein TatA | (RefSeq) sec-independent protein translocase protein TATA, chloroplastic-like","Protein export (ko03060)","--","--","mttA/Hcf106 family","Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATA PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: sec-independent protein translocase protein TATA, chloroplastic-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra010589","Bra010589",24.358643,5078,50.938343,10540,60.612645,11608,15.264106,2205,7.911234,1107,9.163303,1294,{"v":5.38826099935407e-08,"d":"5.39E-08"},-2.56437059344643,"down","--","--","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: nucleotide binding (GO:0000166);; Biological Process: response to oomycetes (GO:0002239);; Molecular Function: binding (GO:0005488);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ion transport (GO:0006811);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: response to ozone (GO:0010193);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain;; Leucine Rich Repeat;; ATPase family associated with various cellular activities (AAA);; Leucine Rich Repeat","Probable disease resistance protein RPP1 OS=Arabidopsis thaliana OX=3702 GN=RPP1 PE=2 SV=1","S","Function unknown","PREDICTED: probable disease resistance protein RPP1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987)"]
["Bra036480","Bra036480",245.625098,20802,203.397069,16929,187.777446,14328,111.088169,6668,93.989022,5281,88.508789,5003,{"v":9.41590379361501e-21,"d":"9.42E-21"},-1.64894023951632,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: protein binding (GO:0005515);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: auxin homeostasis (GO:0010252);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: pollen exine formation (GO:0010584);; Cellular Component: membrane (GO:0016020);; Molecular Function: shikimate O-hydroxycinnamoyltransferase activity (GO:0047172);; Molecular Function: quinate O-hydroxycinnamoyltransferase activity (GO:0047205);; Molecular Function: anthranilate N-benzoyltransferase activity (GO:0047672);; Biological Process: system development (GO:0048731);; Molecular Function: rosmarinate synthase activity (GO:0050266);; Molecular Function: spermidine:sinapoyl CoA N-acyltransferase activity (GO:0080072);; Molecular Function: spermidine:coumaroyl CoA N-acyltransferase activity (GO:0080073);; Molecular Function: spermidine:caffeoyl CoA N-acyltransferase activity (GO:0080074);; Molecular Function: spermidine:feruloyl CoA N-acyltransferase activity (GO:0080075);; Biological Process: spermidine hydroxycinnamate conjugate biosynthetic process (GO:0080088);; ","K13065|0|brp:103828167|K13065 shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133] | (RefSeq) shikimate O-hydroxycinnamoyltransferase","Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)","--","--","Transferase family","Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana OX=3702 GN=HST PE=1 SV=1","S","Function unknown","PREDICTED: shikimate O-hydroxycinnamoyltransferase [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824)"]
["Bra009756","Bra009756",18.078886,2329,27.86954,3637,27.725832,3221,2.306758,210,1.757464,160,2.198682,146,{"v":2.82507801491099e-38,"d":"2.83E-38"},-4.15292108284862,"down","[S]","Function unknown","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to iron ion (GO:0010039);; Biological Process: response to zinc ion (GO:0010043);; Molecular Function: oligopeptide transporter activity (GO:0015198);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: heme binding (GO:0020037);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: seed development (GO:0048316);; Molecular Function: iron-nicotianamine transmembrane transporter activity (GO:0051980);; Biological Process: iron ion homeostasis (GO:0055072);; Biological Process: transmembrane transport (GO:0055085);; ","--","--","--","--","OPT oligopeptide transporter protein","Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana OX=3702 GN=YSL2 PE=1 SV=1","S","Function unknown","PREDICTED: metal-nicotianamine transporter YSL2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra004370","Bra004370",1.848185,158,1.537426,100,1.402358,119,10.197115,513,9.469656,480,6.977279,359,{"v":5.70787630745758e-10,"d":"5.71E-10"},1.77631651837645,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 57 isoform X1 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra021494","Bra021494",0.423195,55,0.347712,44,0.498719,58,23.391201,1966,37.609021,3060,38.905435,3166,{"v":1.03589489457541e-70,"d":"1.04E-70"},5.54910594730817,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: transporter activity (GO:0005215);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: multicellular organism development (GO:0007275);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: fatty acid catabolic process (GO:0009062);; Cellular Component: plastid (GO:0009536);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: response to stimulus (GO:0050896);; Molecular Function: iron-sulfur cluster binding (GO:0051536);; Biological Process: protein maturation (GO:0051604);; ","K06174|0|brp:103842711|K06174 ATP-binding cassette, sub-family E, member 1 | (RefSeq) ABC transporter E family member 1","--","[A]","RNA processing and modification","ABC transporter;; Possible Fer4-like domain in RNase L inhibitor, RLI;; AAA domain, putative AbiEii toxin, Type IV TA system;; 4Fe-4S binding domain;; AAA domain;; AAA domain;; ATPase family associated with various cellular activities (AAA)","ABC transporter E family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCE1 PE=2 SV=1","S","Function unknown","PREDICTED: ABC transporter E family member 1 [Brassica rapa]","molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: electron carrier activity (GO:0009055);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Bra001067","Bra001067",322.68335,23101,547.79248,39574,519.227234,34387,124.725014,6317,64.876198,3163,61.93359,3039,{"v":1.2551280340296e-12,"d":"1.26E-12"},-2.94818299808853,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: proline transport (GO:0015824);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to other organism (GO:0051707);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","--","--","--","U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1","S","Function unknown","PREDICTED: U-box domain-containing protein 21-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: multi-organism process (GO:0051704)"]
["Bra023671","Bra023671",8.145212,3728,15.856855,7476,17.141972,7289,4.87946,1646,5.123562,1738,5.239226,1804,{"v":1.43869155723287e-06,"d":"1.44E-06"},-1.87587127813711,"down","[K]","Transcription","Cellular Component: Golgi membrane (GO:0000139);; Biological Process: response to oomycetes (GO:0002239);; Molecular Function: binding (GO:0005488);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Cellular Component: membrane (GO:0016020);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain;; Leucine Rich Repeat","Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=4 SV=1","S","Function unknown","disease resistance protein [Brassica rapa subsp. pekinensis]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699)"]
["Bra013631","Bra013631",7.891853,296,21.481405,711,23.863481,720,6.028448,160,1.801319,54,2.426795,78,{"v":2.51605339829284e-05,"d":"2.52E-05"},-2.50729595710621,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: anchored component of membrane (GO:0031225);; ","--","--","--","--","Probable lipid transfer","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: uncharacterized protein LOC103860190 isoform X2 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra014384","Bra014384",1.535764,135,0.798398,75,1.200328,83,2.831262,176,3.689392,224,4.640964,297,0.00244425165887442,1.19500926251297,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: translational termination (GO:0006415);; Biological Process: heme biosynthetic process (GO:0006783);; Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: translation release factor activity, codon specific (GO:0016149);; Biological Process: plastid translation (GO:0032544);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K02835|0|brp:103862767|K02835 peptide chain release factor 1 | (RefSeq) peptide chain release factor APG3, chloroplastic","--","[J]","Translation, ribosomal structure and biogenesis","PCRF domain;; RF-1 domain","Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APG3 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: peptide chain release factor APG3, chloroplastic [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)"]
["Bra017305","Bra017305",2.496863,316,3.743715,460,3.678301,451,1.311386,124,0.636941,41,1.312841,110,{"v":4.15546873856538e-05,"d":"4.16E-05"},-2.13552135239934,"down","[N]","Cell motility","Biological Process: MAPK cascade (GO:0000165);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Biological Process: DNA mediated transformation (GO:0009294);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: cellulose synthase activity (GO:0016759);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: mannan synthase activity (GO:0051753);; ","--","--","--","--","Glycosyltransferase like family 2;; Glycosyl transferase family group 2;; Glycosyl transferase family 2;; Glycosyl transferase family 21","Probable mannan synthase 7 OS=Arabidopsis thaliana OX=3702 GN=CSLA7 PE=2 SV=2","M","Cell wall/membrane/envelope biogenesis","BnaA04g20690D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824)"]
["Bra017193","Bra017193",5.305045,765,8.526437,1241,9.910562,1322,1.312297,134,0.42289,42,0.446754,45,{"v":5.88734356281437e-12,"d":"5.89E-12"},-3.78713865998095,"down","[T]","Signal transduction mechanisms","Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuolar lumen (GO:0005775);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: transport (GO:0006810);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to stress (GO:0006950);; Biological Process: vacuolar transport (GO:0007034);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Molecular Function: ATPase-coupled organic phosphonate transmembrane transporter activity (GO:0015416);; Cellular Component: membrane (GO:0016020);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: antibiotic transport (GO:0042891);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC-2 type transporter;; ABC transporter","ABC transporter G family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCG2 PE=2 SV=1","V","Defense mechanisms","PREDICTED: ABC transporter G family member 2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215)"]
["Bra021208","Bra021208",52.804562,6844,65.420975,8556,69.41362,8322,18.656076,1711,10.905176,963,8.588817,763,{"v":6.46110075005604e-14,"d":"6.46E-14"},-2.79212840933479,"down","--","--","Cellular Component: endosome (GO:0005768);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: response to stress (GO:0006950);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: cell tip growth (GO:0009932);; Biological Process: cellulose microfibril organization (GO:0010215);; Cellular Component: anchored component of membrane (GO:0031225);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell wall organization or biogenesis (GO:0071554);; ","--","--","--","--","COBRA-like protein","COBRA-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=COBL8 PE=2 SV=1","S","Function unknown","PREDICTED: COBRA-like protein 8 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501)"]
["Bra016092","Bra016092",3.286326,260,0.950846,76,1.583325,116,6.128277,340,9.524829,508,6.465117,350,0.00798621375989237,1.35039614081905,"up","--","--","--","K14412|0|brp:103831713|K14412 alpha-1,4-fucosyltransferase [EC:2.4.1.65] | (RefSeq) alpha-(1,4)-fucosyltransferase","--","[GE]","Carbohydrate transport and metabolism;; Amino acid transport and metabolism","Glycosyltransferase family 10 (fucosyltransferase) C-term","Alpha-(1,4)-fucosyltransferase OS=Arabidopsis thaliana OX=3702 GN=FUT13 PE=2 SV=2","S","Function unknown","PREDICTED: alpha-(1,4)-fucosyltransferase [Brassica rapa]","--"]
["Bra000357","Bra000357",1.407623,129,1.173846,106,1.154105,97,4.237672,267,4.484027,277,3.54451,217,{"v":8.6881230760795e-06,"d":"8.69E-06"},1.14130078430939,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: chloroplast envelope (GO:0009941);; ","--","--","--","--","Protein of unknown function (DUF3769)","Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD4 PE=1 SV=1","S","Function unknown","PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422)"]
["Bra024546","Bra024546",2.201609,80,4.926508,180,5.871853,197,0.280554,8,0.24003,6,0.803362,20,{"v":4.82071824990602e-07,"d":"4.82E-07"},-3.50003144358915,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: defense response (GO:0006952);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: lignan biosynthetic process (GO:0009807);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: small molecule biosynthetic process (GO:0044283);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; ","--","--","--","--","Dirigent-like protein","Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1","S","Function unknown","PREDICTED: dirigent protein 2 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra002563","Bra002563",1.607251,125,2.225052,188,3.939008,268,1.814123,94,0.914692,47,1.522458,70,0.00684492011809262,-1.4854622391932,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Biological Process: metabolic process (GO:0008152);; Biological Process: proline transport (GO:0015824);; Molecular Function: hydrolase activity (GO:0016787);; ","K07025|0|brp:103845372|K07025 putative hydrolase of the HAD superfamily | (RefSeq) uncharacterized protein C24B11.05","--","[R]","General function prediction only","Haloacid dehalogenase-like hydrolase","--","S","Function unknown","PREDICTED: uncharacterized protein C24B11.05 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824)"]
["Bra029431","Bra029431",2.801315,669,4.547286,1078,5.251074,1149,2.260289,381,2.544742,413,1.455957,222,0.000332790234728018,-1.54949007287297,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid stroma (GO:0009532);; Biological Process: response to virus (GO:0009615);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: ADP binding (GO:0043531);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism transport (GO:0044765);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","TIR domain;; NB-ARC domain;; Leucine rich repeat;; TIR domain;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1","S","Function unknown","PREDICTED: disease resistance protein RPS4 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: organelle part (GO:0044422);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152)"]
["Bra010055","Bra010055",29.37752,3411,17.519136,2053,16.441753,1766,17.598907,1446,12.812742,1013,9.876431,786,0.000615080635548473,-1.15601280163799,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism process (GO:0044699);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","Protein of unknown function (DUF4005);; IQ calmodulin-binding motif","--","S","Function unknown","PREDICTED: protein IQ-DOMAIN 14 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra039707","Bra039707",30.028045,4374,35.054062,4632,37.205717,4091,24.185644,2405,22.981971,2230,18.328475,1611,{"v":1.96271775051952e-06,"d":"1.96E-06"},-1.11503643109829,"down","[L]","Replication, recombination and repair","Molecular Function: acid phosphatase activity (GO:0003993);; Cellular Component: cytosol (GO:0005829);; ","K03787|0|brp:103833477|K03787 5'-nucleotidase [EC:3.1.3.5] | (RefSeq) 5'-nucleotidase SurE-like","Purine metabolism (ko00230);; Pyrimidine metabolism (ko00240);; Nicotinate and nicotinamide metabolism (ko00760)","--","--","Survival protein SurE","--","F","Nucleotide transport and metabolism","PREDICTED: uncharacterized protein LOC103833477 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra020508","Bra020508",2.800169,211,6.230411,474,5.431962,378,1.116283,57,0.220259,12,0.191511,10,{"v":2.33438713005312e-06,"d":"2.33E-06"},-3.46488800247693,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Cellular Component: exine (GO:0043668);; Molecular Function: nutrient reservoir activity (GO:0045735);; ","--","--","--","--","BURP domain","BURP domain protein RD22 OS=Arabidopsis thaliana OX=3702 GN=RD22 PE=2 SV=1","S","Function unknown","PREDICTED: BURP domain protein RD22-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular matrix (GO:0031012);; cellular component: extracellular matrix part (GO:0044420);; molecular function: nutrient reservoir activity (GO:0045735)"]
["Bra028738","Bra028738",0.790556,90,0.875802,93,2.213676,240,0.168372,15,0.157548,13,0.288941,25,{"v":2.10723957368208e-05,"d":"2.11E-05"},-2.85307634316072,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; PMR5 N terminal Domain","Protein trichome birefringence-like 9 OS=Arabidopsis thaliana OX=3702 GN=TBL9 PE=2 SV=1","S","Function unknown","PREDICTED: protein trichome birefringence-like 9 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra036198","Bra036198",13.760754,1470,30.254312,3282,30.576537,3035,9.410019,711,4.542943,328,6.194534,447,{"v":7.00096857954182e-07,"d":"7.00E-07"},-2.38919294415534,"down","--","--","Biological Process: amino acid transmembrane transport (GO:0003333);; Molecular Function: amine transmembrane transporter activity (GO:0005275);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: amino acid transmembrane transporter activity (GO:0015171);; Biological Process: amine transport (GO:0015837);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: substrate-specific transmembrane transporter activity (GO:0022891);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to nitric oxide (GO:0071732);; ","K14207|0|brp:103837226|K14207 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 | (RefSeq) probable sodium-coupled neutral amino acid transporter 6","--","[E]","Amino acid transport and metabolism","Transmembrane amino acid transporter protein;; Tryptophan/tyrosine permease family","Amino acid transporter AVT6A OS=Arabidopsis thaliana OX=3702 GN=AVT6A PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: response to stimulus (GO:0050896)"]
["Bra039311","Bra039311",274.654614,15686,169.179122,9985,147.361902,8022,151.888787,6349,175.052797,5016,110.198159,4379,{"v":4.64545893409355e-05,"d":"4.65E-05"},-1.10505503402735,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell-cell signaling (GO:0007267);; Cellular Component: plasmodesma (GO:0009506);; Molecular Function: galacturonate binding (GO:0048032);; ","--","--","--","--","Remorin, C-terminal region;; Remorin, N-terminal region","Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1","S","Function unknown","PREDICTED: remorin [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054)"]
["Bra025892","Bra025892",11.003314,494,34.660301,1568,40.966755,1699,9.56946,304,5.492623,168,6.316598,194,{"v":1.70225909900992e-05,"d":"1.70E-05"},-2.46534454201985,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: nucleus (GO:0005634);; ","K20725|1.84379e-122|brp:103872924|K20725 MAP kinase substrate 1 | (RefSeq) nuclear speckle RNA-binding protein B","--","--","--","VQ motif","Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1","S","Function unknown","PREDICTED: nuclear speckle RNA-binding protein B [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra036118","Bra036118",9.945989,1322,15.78003,2165,15.213043,1959,9.956947,937,9.670701,888,8.135724,694,0.000744884684407618,-1.17015517704991,"down","[T]","Signal transduction mechanisms","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: activation of MAPKK activity (GO:0000186);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: amino acid import (GO:0043090);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; ","--","--","[R]","General function prediction only","Protein kinase domain;; Protein tyrosine kinase;; Oxidative-stress-responsive kinase 1 C-terminal domain","Probable serine/threonine-protein kinase WNK9 OS=Arabidopsis thaliana OX=3702 GN=WNK9 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable serine/threonine-protein kinase WNK9 isoform X1 [Brassica oleracea var. oleracea]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: molecular transducer activity (GO:0060089);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: rhythmic process (GO:0048511);; biological process: developmental process (GO:0032502)"]
["Bra033775","Bra033775",73.321591,8735,47.017649,5676,49.233756,5476,20.274401,1709,14.649796,1196,15.456,1278,{"v":7.90669383832975e-23,"d":"7.91E-23"},-2.25943628763084,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to singlet oxygen (GO:0000304);; Biological Process: response to hypoxia (GO:0001666);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: triglyceride lipase activity (GO:0004806);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: aerenchyma formation (GO:0010618);; Biological Process: positive regulation of cell death (GO:0010942);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: defense response to fungus (GO:0050832);; ","K18875|0|brp:103874137|K18875 enhanced disease susceptibility 1 protein | (RefSeq) protein EDS1B-like","Plant-pathogen interaction (ko04626)","--","--","Lipase (class 3)","Protein EDS1B OS=Arabidopsis thaliana OX=3702 GN=EDS1B PE=1 SV=1","S","Function unknown","PREDICTED: protein EDS1B-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra001488","Bra001488",3.78102,938,6.943577,1408,5.875672,1220,9.764152,1865,20.7667,4011,21.929951,4061,0.00144497242231739,1.36781558355975,"up","[V]","Defense mechanisms","Cellular Component: plant-type vacuole (GO:0000325);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Molecular Function: chlorophyll catabolite transmembrane transporter activity (GO:0010290);; Molecular Function: glutathione S-conjugate-exporting ATPase activity (GO:0015431);; Biological Process: response to chemical (GO:0042221);; Biological Process: single-organism transport (GO:0044765);; Cellular Component: apoplast (GO:0048046);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter transmembrane region;; ABC transporter;; 50S ribosome-binding GTPase","ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1","V","Defense mechanisms","PREDICTED: ABC transporter C family member 3-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576)"]
["Bra033882","Bra033882",0.710768,67,0.925435,88,0.447574,48,2.697841,198,2.832874,169,2.471776,174,0.00025327318940695,1.33605422486607,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; ","--","--","[I]","Lipid transport and metabolism","START domain","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: uncharacterized protein LOC103868940 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra034026","Bra034026",6.426681,481,8.318333,691,6.742001,605,18.118433,1081,27.643867,1651,25.985104,1556,0.000472705259736352,1.18004585588979,"up","--","--","Cellular Component: PSII associated light-harvesting complex II (GO:0009517);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: photoprotection (GO:0010117);; Biological Process: xanthophyll metabolic process (GO:0016122);; Biological Process: regulation of superoxide anion generation (GO:0032928);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; ","--","--","--","--","Domain of unknown function (DUF4281)","Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABA4 PE=2 SV=1","S","Function unknown","PREDICTED: protein ABA DEFICIENT 4, chloroplastic [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra026445","Bra026445",1.353352,103,0.958831,72,0.495721,38,4.083193,241,7.859558,418,6.216275,340,{"v":1.21431651359686e-06,"d":"1.21E-06"},2.1471143983609,"up","[K]","Transcription","Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast (GO:0009507);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","--","--","NusB family","--","S","Function unknown","uncharacterized protein LOC106444204 [Brassica napus] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra038941","Bra038941",9.078113,203,18.72296,422,24.016724,496,12.693038,201,5.249239,80,3.859605,60,0.00890826629907798,-1.70034578848,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: membrane fusion (GO:0006944);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103833741 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra017516","Bra017516",74.944351,16808,96.786923,23729,80.503037,20163,29.584813,5510,20.245306,3553,19.038978,2892,{"v":2.76722354148816e-12,"d":"2.77E-12"},-2.36960014615435,"down","--","--","--","--","--","[R]","General function prediction only","JmjC domain, hydroxylase;; jmjN domain;; C5HC2 zinc finger","Lysine-specific demethylase JMJ706 OS=Oryza sativa subsp. japonica OX=39947 GN=JMJ706 PE=2 SV=1","S","Function unknown","BnaAnng07270D [Brassica napus]","--"]
["Bra005738","Bra005738",3.233685,113,1.173218,42,0.674717,22,19.189817,472,19.857086,470,19.542065,466,{"v":1.15999842090928e-07,"d":"1.16E-07"},2.86232558490604,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Senescence regulator","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103855485 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra020949","Bra020949",73.918361,3259,62.274829,2773,65.414492,2679,32.152823,1006,52.193512,1587,42.960308,1324,{"v":1.44847184790237e-06,"d":"1.45E-06"},-1.18440970581809,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ion transport (GO:0006811);; Biological Process: water transport (GO:0006833);; Cellular Component: plastid (GO:0009536);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: proteoglycan binding (GO:0043394);; Cellular Component: cytoplasmic part (GO:0044444);; ","--","--","--","--","Phloem protein 2","Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1","S","Function unknown","PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra006685","Bra006685",135.612579,3736,91.926003,2556,83.817413,2137,75.960526,1481,41.736057,784,40.084259,757,{"v":2.81975857173254e-05,"d":"2.82E-05"},-1.47937327020097,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: nucleosome assembly (GO:0006334);; Biological Process: cell proliferation (GO:0008283);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11252|8.8215e-65|bna:106386867|K11252 histone H2B | (RefSeq) histone H2B.3-like","--","[B]","Chromatin structure and dynamics","Core histone H2A/H2B/H3/H4;; Histone-like transcription factor (CBF/NF-Y) and archaeal histone","Histone H2B.10 OS=Arabidopsis thaliana OX=3702 GN=At5g22880 PE=1 SV=3","B","Chromatin structure and dynamics","histone H2B.3-like [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699)"]
["Bra003393","Bra003393",7.050304,129,4.519248,84,2.877259,49,29.807322,385,35.462135,441,36.397709,455,{"v":7.77226882626903e-10,"d":"7.77E-10"},2.22746813885471,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast envelope (GO:0009941);; ","--","--","[R]","General function prediction only","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103830234 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422)"]
["Bra030115","Bra030115",7.093489,243,11.1176,384,10.237655,324,6.051013,147,2.969055,70,5.182415,122,0.000792134080107952,-1.51387312319298,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828989 [Brassica rapa]","--"]
["Bra023063","Bra023063",12.216734,1479,23.031403,2814,20.734564,2323,7.527829,645,7.963823,657,7.624723,633,{"v":3.39656910688364e-07,"d":"3.40E-07"},-1.8160432310528,"down","[T]","Signal transduction mechanisms","Molecular Function: signal transducer, downstream of receptor, with serine/threonine kinase activity (GO:0004702);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: signal transduction by protein phosphorylation (GO:0023014);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana OX=3702 GN=RKF3 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179)"]
["Bra033303","Bra033303",1.812215,146,6.091938,484,5.82926,430,1.80059,102,0.934609,55,0.512135,31,0.00035713030759568,-2.40199924853851,"down","--","--","Biological Process: regionalization (GO:0003002);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: proline biosynthetic process (GO:0006561);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: embryo development (GO:0009790);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: meristem initiation (GO:0010014);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: camalexin biosynthetic process (GO:0010120);; Cellular Component: membrane (GO:0016020);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cell part (GO:0044464);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: gynoecium development (GO:0048467);; Biological Process: post-embryonic animal organ development (GO:0048569);; Biological Process: animal organ formation (GO:0048645);; Biological Process: root cap development (GO:0048829);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=NAC005 PE=2 SV=2","K","Transcription","PREDICTED: NAC domain-containing protein 5-like [Brassica rapa]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414)"]
["Bra009320","Bra009320",6.894892,1909,10.196865,2958,10.123719,2690,5.260357,803,7.017376,902,4.891872,790,{"v":7.44690970078547e-08,"d":"7.45E-08"},-1.64875880698875,"down","[L]","Replication, recombination and repair","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: proteolysis (GO:0006508);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: multicellular organism development (GO:0007275);; Molecular Function: ATP-dependent helicase activity (GO:0008026);; Molecular Function: beta-aspartyl-peptidase activity (GO:0008798);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: intracellular part (GO:0044424);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: meiotic chromosome segregation (GO:0045132);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","[A]","RNA processing and modification","Asparaginase;; DEAD/DEAH box helicase;; Domain of unknown function (DUF1998);; Helicase conserved C-terminal domain","Isoaspartyl peptidase/L-asparaginase 1 OS=Arabidopsis thaliana OX=3702 GN=At5g08100 PE=1 SV=2","L","Replication, recombination and repair","PREDICTED: uncharacterized protein LOC103847576 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; molecular function: binding (GO:0005488)"]
["Bra015390","Bra015390",1.351771,122,0.530933,60,1.118142,92,2.750158,198,3.505914,222,2.671386,175,0.00525049531708159,1.05796800201874,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: ATP binding (GO:0005524);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: UV protection (GO:0009650);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein deubiquitination (GO:0016579);; Biological Process: histone H2B ubiquitination (GO:0033523);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin-conjugating enzyme","Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","BnaA10g03140D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra006179","Bra006179",11.890671,508,10.62847,458,10.415968,412,29.717516,898,48.852203,1420,38.403812,1124,{"v":1.41058929538893e-06,"d":"1.41E-06"},1.26227427463838,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103855998 [Brassica rapa]","--"]
["Brassica_rapa_newGene_3416","--",0.401294,21,0.328764,17,0.279848,14,1.190311,43,2.936063,102,2.792563,98,0.000485522530049559,2.0612393243099,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1","--","--","PREDICTED: protein ORGAN SIZE RELATED 1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra007228","Bra007228",1.808121,76,0.295741,14,0.275072,23,2.171394,57,10.159704,296,12.633663,398,0.00363363065061765,2.42356161513097,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","--","Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH93 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra032650","Bra032650",39.593994,2183,59.923256,3315,66.889783,3337,18.461952,705,6.156202,256,6.482822,325,{"v":4.49231006109651e-09,"d":"4.49E-09"},-2.75756663293149,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: actin filament binding (GO:0051015);; Biological Process: actin filament bundle assembly (GO:0051017);; ","K09377|9.69193e-137|brp:103843810|K09377 cysteine and glycine-rich protein | (RefSeq) LIM domain-containing protein PLIM2b","--","[TZ]","Signal transduction mechanisms;; Cytoskeleton","LIM domain","LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1","Z","Cytoskeleton","PREDICTED: LIM domain-containing protein PLIM2b [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra014339","Bra014339",15.382207,454,34.910797,1039,32.764545,894,2.735143,58,2.200724,45,4.702648,96,{"v":3.64182059820186e-12,"d":"3.64E-12"},-3.50597811366988,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to salt stress (GO:0009651);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: response to chitin (GO:0010200);; Biological Process: proline transport (GO:0015824);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of response to osmotic stress (GO:0047484);; Biological Process: response to karrikin (GO:0080167);; ","K16282|9.06978e-84|brp:103832774|K16282 E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RHA2B-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger","E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase RHA2B-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987)"]
["Bra029293","Bra029293",54.600829,12805,51.813691,10612,41.90359,8832,29.844255,5071,25.064497,4013,24.878738,4020,{"v":1.77665733481166e-15,"d":"1.78E-15"},-1.33223754825469,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: negative regulation of cell proliferation (GO:0008285);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: flower development (GO:0009908);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: fruit dehiscence (GO:0010047);; Biological Process: leaf senescence (GO:0010150);; Biological Process: floral organ abscission (GO:0010227);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: plant ovule development (GO:0048481);; ","--","--","--","--","Auxin response factor;; B3 DNA binding domain","Auxin response factor 2B OS=Solanum lycopersicum OX=4081 GN=ARF2B PE=2 SV=1","--","--","auxin response factor 2-1 [Brassica rapa subsp. pekinensis]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152)"]
["Bra015181","Bra015181",3.396118,133,3.430889,130,2.542201,95,11.840711,312,14.547597,373,14.712929,386,{"v":2.93312069189707e-09,"d":"2.93E-09"},1.5224665366899,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828500 [Brassica rapa] ","--"]
["Bra033705","Bra033705",4.187481,297,7.590059,543,5.986992,393,2.974203,149,2.486988,120,4.204184,205,0.00113266671165683,-1.40914707036514,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: ribokinase activity (GO:0004747);; Biological Process: D-ribose metabolic process (GO:0006014);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: phosphorylation (GO:0016310);; ","--","--","[G]","Carbohydrate transport and metabolism","pfkB family carbohydrate kinase","--","G","Carbohydrate transport and metabolism","PREDICTED: uncharacterized protein LOC103827943 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra015100","Bra015100",3.836561,168,2.353918,98,2.077374,111,11.037308,312,12.442031,334,10.318814,292,{"v":4.93414334382398e-06,"d":"4.93E-06"},1.26651671127353,"up","--","--","--","--","--","--","--","--","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103828579 [Brassica rapa]","--"]
["Bra036792","Bra036792",7.99701,795,19.666599,1956,24.798139,2218,5.060178,336,3.242274,221,2.976114,185,{"v":1.23893081824321e-07,"d":"1.24E-07"},-2.72120201092698,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: mucin-5AC [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra005899","Bra005899",14.959414,973,55.305889,3628,51.950924,3124,7.962368,367,3.82073,170,3.103206,139,{"v":2.69258387641292e-08,"d":"2.69E-08"},-3.386260153367,"down","[I]","Lipid transport and metabolism","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: amino acid transport (GO:0006865);; Biological Process: defense response (GO:0006952);; Biological Process: metabolic process (GO:0008152);; Biological Process: cell death (GO:0008219);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: response to organic cyclic compound (GO:0014070);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: multi-organism process (GO:0051704);; Molecular Function: carboxylic ester hydrolase activity (GO:0052689);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[V]","Defense mechanisms","alpha/beta hydrolase fold;; Carboxylesterase family","Probable carboxylesterase 15 OS=Arabidopsis thaliana OX=3702 GN=CXE15 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: probable carboxylesterase 15 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra018991","Bra018991",8.562108,559,36.943103,2412,38.437366,2301,0.049671,5,0,0,0,0,{"v":4.20922178650436e-08,"d":"4.21E-08"},-6.0706665233243,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 OS=Arabidopsis thaliana OX=3702 GN=AOP1.2 PE=2 SV=1","S","Function unknown","PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra007594","Bra007594",2.630388,508,6.272009,1222,7.645545,1366,0.624693,86,0.168995,23,0.182204,25,{"v":3.13322968511112e-11,"d":"3.13E-11"},-4.28350108462101,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: cellular process (GO:0009987);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism process (GO:0044699);; ","--","--","--","--","C2 domain;; Plant phosphoribosyltransferase C-terminal","FT-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=FTIP1 PE=1 SV=1","S","Function unknown","PREDICTED: FT-interacting protein 1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra030154","Bra030154",6.179327,165,23.135311,621,22.367567,550,8.277655,156,4.943607,90,6.022282,110,0.00227851169697067,-1.89096510230787,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: response to gibberellin (GO:0009739);; ","--","--","--","--","Senescence regulator","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828949 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra020463","Bra020463",0.225559,41,0.060539,13,0.055094,11,0.805778,114,0.445888,61,1.678751,112,0.00255851794873672,1.99495223969782,"up","[T]","Signal transduction mechanisms","Molecular Function: acid phosphatase activity (GO:0003993);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","--","Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SMXL5 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: LOW QUALITY PROTEIN: protein SMAX1-LIKE 5-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell junction (GO:0030054);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414)"]
["Bra008743","Bra008743",92.792884,7351,154.142099,12542,162.978863,12261,33.111776,1863,13.731695,836,13.176,817,{"v":2.45070899385233e-12,"d":"2.45E-12"},-3.16576663698303,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: RNA processing (GO:0006396);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to metal ion (GO:0010038);; Biological Process: pollen exine formation (GO:0010584);; Cellular Component: membrane (GO:0016020);; Biological Process: carotenoid metabolic process (GO:0016116);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cytosolic transport (GO:0016482);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: histone methylation (GO:0016571);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: regulation of programmed cell death (GO:0043067);; Molecular Function: DNA binding (GO:0043566);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: innate immune response (GO:0045087);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: phyllome development (GO:0048827);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: organic substance transport (GO:0071702);; Cellular Component: cell periphery (GO:0071944);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[V]","Defense mechanisms","NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; NAD(P)H-binding;; Polysaccharide biosynthesis protein","Cinnamoyl-CoA reductase-like SNL6 OS=Oryza sativa subsp. japonica OX=39947 GN=SNL6 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: cinnamoyl-CoA reductase-like SNL6 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414)"]
["Bra010472","Bra010472",13.342261,988,28.414986,2093,27.292642,1848,67.965899,3470,104.205489,5171,110.496985,5493,0.00145181133522274,1.38804703575357,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to stress (GO:0006950);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity (GO:0009815);; Biological Process: cell wall modification involved in abscission (GO:0009830);; Biological Process: seed germination (GO:0009845);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: animal organ senescence (GO:0010260);; Molecular Function: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (GO:0016682);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: transferase activity (GO:0016740);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Molecular Function: ion binding (GO:0043167);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to fatty acid (GO:0071398);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1","S","Function unknown","PREDICTED: protein SRG1-like isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003)"]
["Bra034278","Bra034278",2.664519,496,4.473381,898,6.264768,1171,0.659556,95,0.201587,31,1.234433,169,{"v":6.0396692288948e-06,"d":"6.04E-06"},-2.97190728580288,"down","[K]","Transcription","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein folding (GO:0006457);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: transport (GO:0006810);; Biological Process: defense response (GO:0006952);; Biological Process: immune response (GO:0006955);; Biological Process: epidermis development (GO:0008544);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: response to heat (GO:0009408);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cell differentiation (GO:0030154);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular component morphogenesis (GO:0032989);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Molecular Function: signaling receptor activity (GO:0038023);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: external encapsulating structure organization (GO:0045229);; Biological Process: stamen development (GO:0048443);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: response to alcohol (GO:0097305);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine Rich repeat;; Leucine rich repeat N-terminal domain","Receptor-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RLP19 PE=2 SV=1","S","Function unknown","PREDICTED: receptor-like protein 12 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra037294","Bra037294",154.560918,19248,146.899612,19215,159.22045,19803,40.871783,3691,49.521147,4314,33.805447,3693,{"v":6.26034283577545e-39,"d":"6.26E-39"},-2.3611360111585,"down","--","--","Biological Process: circadian rhythm (GO:0007623);; Cellular Component: chloroplast (GO:0009507);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","Nodulin-like","Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1","--","--","PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Brassica rapa]","biological process: rhythmic process (GO:0048511);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra037652","Bra037652",1.767741,140,5.415438,433,5.684644,417,1.044328,59,0.965778,53,0.403361,22,{"v":1.7241573588953e-05,"d":"1.72E-05"},-2.77311154396375,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: extracellular region (GO:0005576);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism process (GO:0044699);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","C1 domain","--","S","Function unknown","uncharacterized protein LOC106429258 [Brassica napus]","molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra018194","Bra018194",1.544313,127,0.989702,82,0.945221,72,3.203649,186,3.106452,173,4.173805,234,0.00222046022484599,1.0319816346043,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; ","--","--","[R]","General function prediction only","PPR repeat family;; Pentatricopeptide repeat domain;; PPR repeat","Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At3g42630 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra013993","Bra013993",1.575199,62,1.369323,54,0.977346,36,4.102445,114,6.050099,161,6.070171,163,0.000161273576623875,1.45882281489651,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi stack (GO:0005795);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: chlorophyll catabolic process (GO:0015996);; Molecular Function: heat shock protein binding (GO:0031072);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: response to cadmium ion (GO:0046686);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","DnaJ domain","Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699)"]
["Bra011045","Bra011045",1.64573,185,2.237865,253,2.535799,245,7.042462,631,4.007024,340,10.931313,939,0.005170839616641,1.3558146279236,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: gravitropism (GO:0009630);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryonic pattern specification (GO:0009880);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: regulation of biological quality (GO:0065008);; ","K14484|2.1207e-163|brp:103854273|K14484 auxin-responsive protein IAA | (RefSeq) auxin-responsive protein IAA11","Plant hormone signal transduction (ko04075)","--","--","AUX/IAA family","Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1","K","Transcription","PREDICTED: auxin-responsive protein IAA11 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007)"]
["Bra032730","Bra032730",1.661141,151,0.950096,95,1.005376,94,2.701368,184,4.928245,385,3.901193,282,0.00298709787397724,1.26116030168909,"up","[G]","Carbohydrate transport and metabolism","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Cellular Component: extracellular region (GO:0005576);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem growth (GO:0010075);; Cellular Component: membrane (GO:0016020);; Molecular Function: pectate lyase activity (GO:0030570);; Biological Process: cell wall modification involved in multidimensional cell growth (GO:0042547);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: pectin catabolic process (GO:0045490);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: root hair elongation (GO:0048767);; ","K01728|0|brp:103863605|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) probable pectate lyase 15","Pentose and glucuronate interconversions (ko00040)","--","--","Pectate lyase;; Right handed beta helix region","Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable pectate lyase 15 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra013278","Bra013278",3.565847,425,0.616716,77,0.760551,90,7.364668,779,8.648763,906,7.861309,824,0.00159988343829469,1.98694567875636,"up","--","--","Molecular Function: phosphorelay response regulator activity (GO:0000156);; Biological Process: phosphorelay signal transduction system (GO:0000160);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: plastid organization (GO:0009657);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: pigment metabolic process (GO:0042440);; Biological Process: root development (GO:0048364);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: regulation of developmental growth (GO:0048638);; Biological Process: cellular response to cytokinin stimulus (GO:0071368);; ","--","--","[K]","Transcription","Response regulator receiver domain;; Myb-like DNA-binding domain","Two-component response regulator-like APRR2 OS=Arabidopsis thaliana OX=3702 GN=APRR2 PE=2 SV=2","K","Transcription","PREDICTED: two-component response regulator-like APRR2 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501)"]
["Bra037287","Bra037287",7.542529,538,2.901743,209,3.087741,204,12.065615,608,20.688078,1004,18.852188,920,0.00240617865674598,1.37381297016232,"up","[P]","Inorganic ion transport and metabolism","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cobalt ion transport (GO:0006824);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; Cellular Component: chloroplast (GO:0009507);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: vegetative phase change (GO:0010050);; Molecular Function: cobalt ion transmembrane transporter activity (GO:0015087);; Molecular Function: nickel cation transmembrane transporter activity (GO:0015099);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: nickel cation transmembrane transport (GO:0035444);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","Cytochrome C biogenesis protein transmembrane region","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837785 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488)"]
["Bra004499","Bra004499",36.917004,2328,8.225705,524,6.515436,381,6.084632,272,4.090361,176,4.635319,201,0.00106432625715958,-2.10610647708716,"down","[R]","General function prediction only","Cellular Component: cytoplasm (GO:0005737);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627);; ","--","--","[R]","General function prediction only","Protein of unknown function (DUF1295);; Phospholipid methyltransferase","--","S","Function unknown","PREDICTED: uncharacterized protein C594.04c [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)"]
["Bra021100","Bra021100",0.073999,21,0.059023,17,0.008021,3,0.496264,66,0.542296,101,0.850211,147,0.000262204853689521,2.6624231681187,"up","[R]","General function prediction only","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: DNA repair (GO:0006281);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: signal transduction (GO:0007165);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: response to organic substance (GO:0010033);; Biological Process: negative regulation of photomorphogenesis (GO:0010100);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: reproductive structure development (GO:0048608);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; ","--","--","--","--","WD domain, G-beta repeat;; Anaphase-promoting complex subunit 4 WD40 domain;; Protein kinase domain","Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: protein SPA1-RELATED 3-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra006592","Bra006592",3.518166,235,5.614705,378,4.087263,252,1.670066,79,0.302752,14,0.261534,12,0.00023824684922295,-2.79499885849013,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: nucleus (GO:0005634);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: response to stimulus (GO:0050896);; Cellular Component: cell periphery (GO:0071944);; ","--","--","[T]","Signal transduction mechanisms","Hyccin","--","S","Function unknown","PREDICTED: hyccin-like [Brassica rapa] ","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra002766","Bra002766",4.336218,377,2.245026,193,1.641831,133,7.968343,471,14.376163,833,13.961676,854,0.000565250034736826,1.56820010864348,"up","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to superoxide (GO:0000303);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: negative regulation of protein kinase activity (GO:0006469);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: autophagy (GO:0006914);; Cellular Component: protein serine/threonine phosphatase complex (GO:0008287);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: response to wounding (GO:0009611);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: response to auxin (GO:0009733);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: leaf senescence (GO:0010150);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: photoinhibition (GO:0010205);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Cellular Component: cis-Golgi network membrane (GO:0033106);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of reproductive process (GO:2000241);; ","K14497|0|brp:103845142|K14497 protein phosphatase 2C [EC:3.1.3.16] | (RefSeq) protein phosphatase 2C 77","Plant hormone signal transduction (ko04075)","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Protein phosphatase 2C 77 OS=Arabidopsis thaliana OX=3702 GN=ABI2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: protein phosphatase 2C 77 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422)"]
["Bra035212","Bra035212",3.516174,697,4.926721,981,6.365167,1165,1.741913,250,0.802,108,0.730352,108,{"v":6.38118287545608e-08,"d":"6.38E-08"},-2.59266636057664,"down","--","--","Molecular Function: peroxidase activity (GO:0004601);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Cellular Component: cell part (GO:0044464);; ","--","--","--","--","C2 domain;; Plant phosphoribosyltransferase C-terminal","FT-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=FTIP1 PE=1 SV=1","S","Function unknown","PREDICTED: FT-interacting protein 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: cellular process (GO:0009987);; cellular component: cell part (GO:0044464)"]
["Bra039359","Bra039359",17.913548,5043,16.925626,4905,17.479939,5068,9.900184,2348,9.610985,1987,9.867083,2132,{"v":7.54964102178614e-14,"d":"7.55E-14"},-1.26824559718645,"down","--","--","Molecular Function: transcription cofactor activity (GO:0003712);; Molecular Function: histone acetyltransferase activity (GO:0004402);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of transcription from RNA polymerase II promoter (GO:0006357);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA mediated transformation (GO:0009294);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: flower development (GO:0009908);; Biological Process: histone acetylation (GO:0016573);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: gametophyte development (GO:0048229);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K04498|0|brp:103849727|K04498 E1A/CREB-binding protein [EC:2.3.1.48] | (RefSeq) histone acetyltransferase HAC5-like","--","[K]","Transcription","Histone acetylation protein;; TAZ zinc finger","Histone acetyltransferase HAC5 OS=Arabidopsis thaliana OX=3702 GN=HAC5 PE=2 SV=1","BK","Chromatin structure and dynamics;; Transcription","PREDICTED: histone acetyltransferase HAC5-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: protein binding transcription factor activity (GO:0000988);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: multi-organism process (GO:0051704);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra003511","Bra003511",3.086868,291,9.159744,899,8.578686,781,1.43817,99,0.691434,48,0.278882,20,{"v":8.06863630005573e-07,"d":"8.07E-07"},-3.36027942820956,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: binding (GO:0005488);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell communication (GO:0007154);; Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Molecular Function: racemase and epimerase activity, acting on carbohydrates and derivatives (GO:0016857);; Biological Process: dTDP-rhamnose biosynthetic process (GO:0019305);; Biological Process: D-xylose metabolic process (GO:0042732);; Molecular Function: UDP-glucuronate decarboxylase activity (GO:0048040);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: cellular response to stimulus (GO:0051716);; ","K08678|0|brp:103830371|K08678 UDP-glucuronate decarboxylase [EC:4.1.1.35] | (RefSeq) UDP-glucuronic acid decarboxylase 2-like","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[GM]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; RmlD substrate binding domain;; Male sterility protein;; Polysaccharide biosynthesis protein","UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Bra006948","Bra006948",0.136468,12,0.198591,17,0.166021,13,3.70396,218,8.317578,470,7.678379,436,{"v":4.34457198256591e-20,"d":"4.34E-20"},4.47977559130369,"up","[T]","Signal transduction mechanisms","Molecular Function: acid phosphatase activity (GO:0003993);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: single-multicellular organism process (GO:0044707);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: phosphate ion homeostasis (GO:0055062);; ","--","--","[G]","Carbohydrate transport and metabolism","Calcineurin-like phosphoesterase;; Purple acid Phosphatase, N-terminal domain;; Iron/zinc purple acid phosphatase-like protein C","Probable purple acid phosphatase 20 OS=Arabidopsis thaliana OX=3702 GN=PAP20 PE=2 SV=1","S","Function unknown","PREDICTED: probable purple acid phosphatase 20 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra036755","Bra036755",0.994745,110,1.45238,161,1.955672,199,0.66873,52,0.216329,17,0.160841,13,0.000429337760640548,-2.40367046793654,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Biological Process: purine nucleobase transport (GO:0006863);; Molecular Function: sucrose:proton symporter activity (GO:0008506);; Biological Process: response to heat (GO:0009408);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to nitrate (GO:0010167);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: nitrate transport (GO:0015706);; Biological Process: sucrose transport (GO:0015770);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily;; Fungal trichothecene efflux pump (TRI12)","Sugar transport protein 5 OS=Arabidopsis thaliana OX=3702 GN=STP5 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: sugar transport protein 5 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)"]
["Bra009295","Bra009295",13.630959,2578,21.174892,3932,29.430137,5116,12.995519,1836,7.667548,1104,7.588891,1098,0.000234433763722123,-1.57482378717184,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","--","--","[K]","Transcription","Histone-like transcription factor (CBF/NF-Y) and archaeal histone","Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1","K","Transcription","PREDICTED: dr1-associated corepressor homolog isoform X1 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra026182","Bra026182",35.432377,2281,87.13687,5720,84.848114,5167,4.662832,216,9.225893,399,8.541116,393,{"v":5.90207052289171e-14,"d":"5.90E-14"},-3.63907802895317,"down","[V]","Defense mechanisms","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Molecular Function: diphosphoinositol-polyphosphate diphosphatase activity (GO:0008486);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to chitin (GO:0010200);; Molecular Function: bis(5'-adenosyl)-pentaphosphatase activity (GO:0034432);; Molecular Function: inositol diphosphate tetrakisphosphate diphosphatase activity (GO:0052840);; Molecular Function: inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity (GO:0052843);; Molecular Function: inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity (GO:0052844);; Molecular Function: inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity (GO:0052845);; Molecular Function: inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity (GO:0052846);; Molecular Function: inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity (GO:0052847);; Molecular Function: inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity (GO:0052848);; ","K07766|2.86233e-115|brp:103872280|K07766 diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52] | (RefSeq) nudix hydrolase 18, mitochondrial","--","[T]","Signal transduction mechanisms","NUDIX domain","Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2 SV=1","L","Replication, recombination and repair","PREDICTED: nudix hydrolase 18, mitochondrial [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Bra034851","Bra034851",68.138685,4990,44.656591,3307,29.694211,2076,31.226162,1702,19.80265,1012,18.545888,931,{"v":8.68285826809571e-05,"d":"8.68E-05"},-1.48765842756569,"down","--","--","Molecular Function: GDP-fucose transmembrane transporter activity (GO:0005457);; Molecular Function: UDP-galactose transmembrane transporter activity (GO:0005459);; Molecular Function: UDP-glucose transmembrane transporter activity (GO:0005460);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: purine nucleobase transport (GO:0006863);; Molecular Function: organic anion transmembrane transporter activity (GO:0008514);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid envelope (GO:0009526);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Molecular Function: antiporter activity (GO:0015297);; Biological Process: organic anion transport (GO:0015711);; Biological Process: GDP-fucose transport (GO:0015783);; Biological Process: UDP-glucose transport (GO:0015786);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cell growth (GO:0016049);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: cellulose metabolic process (GO:0030243);; Biological Process: UDP-galactose transmembrane transport (GO:0072334);; ","--","--","[GE]","Carbohydrate transport and metabolism;; Amino acid transport and metabolism","Triose-phosphate Transporter family;; UAA transporter family;; EamA-like transporter family","Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana OX=3702 GN=At3g11320 PE=2 SV=1","S","Function unknown","PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007)"]
["Bra014441","Bra014441",40.477887,6786,46.062669,7776,54.154,8428,18.992366,2286,7.987941,929,10.569174,1207,{"v":2.16429151774256e-09,"d":"2.16E-09"},-2.38712260676476,"down","--","--","--","--","--","--","--","Domain of unknown function (DUF4378)","--","--","--","PREDICTED: uncharacterized protein LOC103862829 isoform X2 [Brassica rapa]","--"]
["Bra036863","Bra036863",3.707882,309,3.794996,318,2.973723,233,12.504766,712,17.881235,984,16.206145,901,{"v":6.6283207395716e-10,"d":"6.63E-10"},1.5350262238526,"up","[R]","General function prediction only","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: plastid (GO:0009536);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Molecular Function: hydrolase activity (GO:0016787);; ","K07019|0|brp:103840994|K07019 uncharacterized protein | (RefSeq) embryogenesis-associated protein EMB8","--","[R]","General function prediction only","alpha/beta hydrolase fold;; Alpha/beta hydrolase family;; Serine aminopeptidase, S33","Embryogenesis-associated protein EMB8 OS=Picea glauca OX=3330 GN=EMB8 PE=2 SV=1","S","Function unknown","PREDICTED: embryogenesis-associated protein EMB8 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra039306","Bra039306",4.452607,564,6.101102,819,5.904182,701,4.853255,381,3.163775,268,3.52324,299,0.000255659678544756,-1.18901897032838,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to gibberellin (GO:0009739);; ","--","--","--","--","Domain of unknown function (DUF4378)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103866248 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896)"]
["Bra017563","Bra017563",62.039388,15137,258.838155,64512,76.171989,17486,13.617186,2406,58.812336,9864,22.156969,3755,0.000679964394589118,-2.42764196141284,"down","[K]","Transcription","Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: endosome (GO:0005768);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: receptor-mediated endocytosis (GO:0006898);; Biological Process: immune response (GO:0006955);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: pattern specification process (GO:0007389);; Biological Process: epidermis development (GO:0008544);; Biological Process: response to hormone (GO:0009725);; Biological Process: embryo development (GO:0009790);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: regulation of growth (GO:0040008);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: flavonol synthase activity (GO:0045431);; Biological Process: meristem development (GO:0048507);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: phyllome development (GO:0048827);; Biological Process: cell division (GO:0051301);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","K13420|0|brp:103839616|K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) FLS2; LRR receptor-like serine/threonine-protein kinase FLS2","Plant-pathogen interaction (ko04626)","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Phosphotransferase enzyme family","LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana OX=3702 GN=FLS2 PE=1 SV=1","S","Function unknown","PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra019060","Bra019060",25.736757,3157,13.490905,1661,12.138026,1396,15.569205,1339,6.086609,515,7.328606,619,0.00672718729402481,-1.29555449041814,"down","[HJ]","Coenzyme transport and metabolism;; Translation, ribosomal structure and biogenesis","Cellular Component: chloroplast (GO:0009507);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: auxin homeostasis (GO:0010252);; Molecular Function: indole-3-acetic acid amido synthetase activity (GO:0010279);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: positive regulation of camalexin biosynthetic process (GO:1901183);; ","K14487|0|brp:103861684|K14487 auxin responsive GH3 gene family | (RefSeq) indole-3-acetic acid-amido synthetase GH3.5","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana OX=3702 GN=GH3.5 PE=1 SV=1","S","Function unknown","PREDICTED: indole-3-acetic acid-amido synthetase GH3.5 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Brassica_rapa_newGene_10689","--",0.924289,109,0.44343,53,0.556008,62,2.142118,166,4.472711,318,2.336796,174,0.00197965747293474,1.47925531325709,"up","--","--","--","--","--","--","--","--","--","M","Cell wall/membrane/envelope biogenesis","BnaCnng16020D [Brassica napus]","--"]
["Bra008382","Bra008382",18.34963,684,3.551151,134,3.664785,127,41.602642,1097,60.008057,1523,58.113857,1484,0.00138590482741255,2.02336380970358,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: cytokinin biosynthetic process (GO:0009691);; ","--","--","--","--","Protein of unknown function (DUF640)","Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 OS=Arabidopsis thaliana OX=3702 GN=LSH7 PE=1 SV=1","S","Function unknown","PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra014881","Bra014881",1.292626,135,0.324035,45,0.626908,72,1.665224,183,2.20437,216,3.49145,329,0.00493739852713718,1.45496343642221,"up","--","--","--","--","--","[TA]","Signal transduction mechanisms;; RNA processing and modification","YT521-B-like domain","30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana OX=3702 GN=CPSF30 PE=1 SV=1","S","Function unknown","30-kDa cleavage and polyadenylation specificity factor 30-like isoform X1 [Brassica napus]","--"]
["Bra039958","Bra039958",4.384594,549,3.136444,389,4.049821,455,11.727466,1050,14.616842,1243,11.633728,991,{"v":3.67773697660002e-08,"d":"3.68E-08"},1.18380509656179,"up","--","--","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Cellular Component: nucleus (GO:0005634);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: virus induced gene silencing (GO:0009616);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103869032 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra027350","Bra027350",52.661335,6059,45.88979,5328,41.631622,4431,45.640083,3715,27.103949,2124,27.413774,2162,0.000566058425270546,-1.01506114613937,"down","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: amino acid transport (GO:0006865);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: response to nematode (GO:0009624);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; Cellular Component: apoplast (GO:0048046);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K01051|0|brp:103870041|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) pectinesterase/pectinesterase inhibitor 3","Pentose and glucuronate interconversions (ko00040);; Starch and sucrose metabolism (ko00500)","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME3 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: pectinesterase/pectinesterase inhibitor 3 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra012504","Bra012504",4.688552,382,2.690708,221,1.130784,86,0.687566,40,0.546801,31,0.642408,36,{"v":7.95217535552669e-06,"d":"7.95E-06"},-2.52411311741855,"down","[K]","Transcription","Molecular Function: binding (GO:0005488);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell cycle process (GO:0022402);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: protein complex (GO:0043234);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ development (GO:0048513);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[R]","General function prediction only","WD domain, G-beta repeat;; PQQ-like domain","Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103829124 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; biological process: metabolic process (GO:0008152);; cellular component: organelle part (GO:0044422)"]
["Bra024068","Bra024068",559.04859,31289,696.86733,38625,693.7612,36296,150.002568,5756,101.364614,3776,114.617826,4301,{"v":8.04909345090569e-30,"d":"8.05E-30"},-2.97379437056642,"down","[F]","Nucleotide transport and metabolism","Cellular Component: cytosol (GO:0005829);; Biological Process: glutamine metabolic process (GO:0006541);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; Biological Process: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine (GO:0019281);; Biological Process: glucosinolate metabolic process (GO:0019760);; Molecular Function: gamma-glutamyl-peptidase activity (GO:0034722);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[F]","Nucleotide transport and metabolism","Glutamine amidotransferase class-I;; Peptidase C26;; Homoserine O-succinyltransferase","Gamma-glutamyl peptidase 1 OS=Arabidopsis thaliana OX=3702 GN=GGP1 PE=1 SV=1","F","Nucleotide transport and metabolism","PREDICTED: gamma-glutamyl peptidase 1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra015543","Bra015543",37.532059,4355,60.501022,7084,55.523876,5960,14.585058,1198,8.830374,698,8.627156,686,{"v":4.71963392594025e-14,"d":"4.72E-14"},-2.76596840147438,"down","--","--","--","K07195|0|brp:103843993|K07195 exocyst complex component 7 | (RefSeq) exocyst complex component EXO70B1","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Exo70 exocyst complex subunit","Exocyst complex component EXO70B2 OS=Arabidopsis thaliana OX=3702 GN=EXO70B2 PE=1 SV=1","S","Function unknown","PREDICTED: exocyst complex component EXO70B1 [Brassica rapa]","--"]
["Bra000161","Bra000161",3.214487,231,2.060278,151,2.023919,132,11.731941,607,10.410258,496,11.564451,555,{"v":2.91015016789754e-11,"d":"2.91E-11"},1.64361584246763,"up","--","--","--","--","--","--","--","Ubiquitin-binding WIYLD domain","--","S","Function unknown","PREDICTED: histone acetyltransferase KAT6B isoform X2 [Brassica rapa]","--"]
["Bra023102","Bra023102",37.077825,2068,113.310703,6379,89.505182,4604,44.11057,1733,47.651683,1804,39.727239,1508,0.00412057032056229,-1.41019768303047,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: water channel activity (GO:0015250);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root hair elongation (GO:0048767);; Biological Process: hydrogen peroxide transmembrane transport (GO:0080170);; ","K09872|0|brp:103857660|K09872 aquaporin PIP | (RefSeq) aquaporin PIP2-2-like","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Aquaporin PIP2-2 OS=Arabidopsis thaliana OX=3702 GN=PIP2-2 PE=1 SV=2","G","Carbohydrate transport and metabolism","aquaporin PIP2-2-like [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra013854","Bra013854",2.794524,184,6.007404,395,6.035688,385,0,0,0,0,0,0,{"v":2.98502095878438e-20,"d":"2.99E-20"},-8.27029797034007,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: copper ion transport (GO:0006825);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: sucrose transmembrane transporter activity (GO:0008515);; Cellular Component: plastid (GO:0009536);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: leaf senescence (GO:0010150);; Biological Process: sucrose transport (GO:0015770);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to salicylic acid stimulus (GO:0071446);; Biological Process: cellular response to osmotic stress (GO:0071470);; ","K15382|0|brp:103862809|K15382 solute carrier family 50 (sugar transporter) | (RefSeq) bidirectional sugar transporter SWEET14-like","--","[R]","General function prediction only","Sugar efflux transporter for intercellular exchange","Bidirectional sugar transporter SWEET14 OS=Arabidopsis thaliana OX=3702 GN=SWEET14 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: bidirectional sugar transporter SWEET14-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: transporter activity (GO:0005215);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra007441","Bra007441",21.60541,1003,27.949847,1307,27.689431,1210,18.840721,600,12.819721,395,13.842395,448,{"v":9.69724677604595e-06,"d":"9.70E-06"},-1.3380081442494,"down","--","--","Cellular Component: mitochondrial inner membrane presequence translocase complex (GO:0005744);; Biological Process: protein import into mitochondrial matrix (GO:0030150);; ","K17805|6.96239e-78|brp:103841778|K17805 mitochondrial import inner membrane translocase subunit TIM16 | (RefSeq) mitochondrial import inner membrane translocase subunit tim16-like","--","[S]","Function unknown","Pam16","Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra015588","Bra015588",0.162786,19,0.283792,33,0.060257,7,2.111783,131,1.264333,97,2.263995,165,{"v":8.65136947289167e-05,"d":"8.65E-05"},2.50530336841941,"up","--","--","--","--","--","--","--","--","--","--","--","BnaUnng02200D [Brassica napus]","--"]
["Brassica_rapa_newGene_3640","--",2.028462,426,3.766237,798,4.682528,910,1.602867,238,0.20246,29,0.957232,138,0.0017413855175612,-2.27382537124592,"down","--","--","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; ","K04125|1.97826e-96|brp:103858857|K04125 gibberellin 2-oxidase [EC:1.14.11.13] | (RefSeq) gibberellin 2-beta-dioxygenase 8","Diterpenoid biosynthesis (ko00904)","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","non-haem dioxygenase in morphine synthesis N-terminal","Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana OX=3702 GN=GA2OX8 PE=1 SV=2","S","Function unknown","PREDICTED: gibberellin 2-beta-dioxygenase 8 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699)"]
["Bra022374","Bra022374",9.599172,420,3.794815,178,2.653656,110,28.913653,945,49.476538,1510,55.110055,1706,{"v":5.65829208312117e-07,"d":"5.66E-07"},2.46744017580371,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: vernalization response (GO:0010048);; ","--","--","--","--","B3 DNA binding domain","B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1","K","Transcription","PREDICTED: B3 domain-containing protein At3g18960 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896)"]
["Bra023860","Bra023860",20.111772,2946,18.195445,2681,19.484939,2660,13.426583,1283,11.624464,1178,9.91501,946,{"v":1.61001816445621e-12,"d":"1.61E-12"},-1.327610979826,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","Zinc finger C-x8-C-x5-C-x3-H type (and similar)","Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=At3g21810 PE=1 SV=1","S","Function unknown","PREDICTED: zinc finger CCCH domain-containing protein 40 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra038214","Bra038214",33.338764,3112,32.322907,3061,30.157891,2645,20.139117,1357,21.862628,1417,17.185042,1153,{"v":1.64402060358316e-13,"d":"1.64E-13"},-1.2115490198842,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","Protein of unknown function (DUF620)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837206 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra018996","Bra018996",23.062675,417,14.590327,266,20.534668,343,6.240403,80,0.608473,8,5.378001,67,0.000623076909435068,-2.51129061833655,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871176 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra015262","Bra015262",0.816407,51,1.123833,70,0.900005,49,4.54527,198,2.396497,104,3.106922,129,0.00718631843830133,1.23614134526911,"up","--","--","--","K10695|5.4354e-164|brp:103844319|K10695 E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27] | (RefSeq) putative E3 ubiquitin-protein ligase RING1b","--","[O]","Posttranslational modification, protein turnover, chaperones","Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; Ring finger domain","Putative E3 ubiquitin-protein ligase RING1b OS=Arabidopsis thaliana OX=3702 GN=RING1B PE=1 SV=1","K","Transcription","PREDICTED: putative E3 ubiquitin-protein ligase RING1b [Brassica rapa]","--"]
["Bra009231","Bra009231",1.447252,245,0.904939,120,1.096504,152,3.668648,338,3.629973,376,3.366448,394,0.00122765966775329,1.05663289402601,"up","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: root epidermal cell differentiation (GO:0010053);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: positive regulation of cell fate specification (GO:0042660);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: innate immune response (GO:0045087);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: leaf development (GO:0048366);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: embryonic meristem development (GO:0048508);; Biological Process: regulation of root morphogenesis (GO:2000067);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Leucine rich repeat","Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana OX=3702 GN=SRF2 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 2 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra008877","Bra008877",11.021076,1386,9.64221,1224,11.308007,1316,7.827497,697,8.450644,724,7.061355,609,{"v":3.33369296858527e-08,"d":"3.33E-08"},-1.0002772503995,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: phosphatidylinositol biosynthetic process (GO:0006661);; Biological Process: defense response (GO:0006952);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf senescence (GO:0010150);; Biological Process: chlorophyll catabolic process (GO:0015996);; Biological Process: single-organism transport (GO:0044765);; Biological Process: intracellular transport (GO:0046907);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: organic substance transport (GO:0071702);; ","--","--","[R]","General function prediction only","Ankyrin repeat;; Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Zinc finger C-x8-C-x5-C-x3-H type (and similar);; Ankyrin repeats (many copies)","Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana OX=3702 GN=At5g12850 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger CCCH domain-containing protein 56 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179)"]
["Bra007934","Bra007934",22.716704,1083,42.83497,2122,49.841206,2196,24.682042,777,12.384629,410,12.825775,417,0.00016280743078527,-1.78194561458476,"down","[T]","Signal transduction mechanisms","Molecular Function: glycerol-3-phosphate O-acyltransferase activity (GO:0004366);; Molecular Function: heme oxygenase (decyclizing) activity (GO:0004392);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Biological Process: defense response (GO:0006952);; Biological Process: response to desiccation (GO:0009269);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to fungus (GO:0009620);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: drought recovery (GO:0009819);; Biological Process: seed germination (GO:0009845);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: stomatal movement (GO:0010118);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: lipase activity (GO:0016298);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: lipid storage (GO:0019915);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Cellular Component: chloroplast membrane (GO:0031969);; Biological Process: lipid particle organization (GO:0034389);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: cotyledon development (GO:0048825);; Biological Process: response to freezing (GO:0050826);; Biological Process: cell division (GO:0051301);; Molecular Function: linoleic acid epoxygenase activity (GO:0071614);; Molecular Function: plant seed peroxidase activity (GO:1990137);; ","K17991|3.09515e-139|brp:103852674|K17991 peroxygenase [EC:1.11.2.3] | (RefSeq) probable peroxygenase 4","Cutin, suberine and wax biosynthesis (ko00073)","--","--","Caleosin related protein","Probable peroxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=PXG4 PE=1 SV=1","S","Function unknown","PREDICTED: probable peroxygenase 4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: signaling (GO:0023052);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra014043","Bra014043",31.393782,6729,29.962177,6915,32.378237,6798,24.535436,3669,19.406816,2855,15.97772,2384,{"v":1.66282869509956e-07,"d":"1.66E-07"},-1.24803485330611,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: embryo development (GO:0009790);; Biological Process: response to chitin (GO:0010200);; Cellular Component: membrane (GO:0016020);; Molecular Function: ubiquitin conjugating enzyme binding (GO:0031624);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: negative regulation of organ growth (GO:0046621);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of response to osmotic stress (GO:0047484);; Biological Process: floral organ development (GO:0048437);; Biological Process: protein autoubiquitination (GO:0051865);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; RING-like zinc finger;; RING-type zinc-finger","Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana OX=3702 GN=RHG1A PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin-protein ligase RHG1A [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra030157","Bra030157",24.098948,1514,21.643883,1372,20.677641,1202,13.280819,590,11.414656,489,10.959194,472,{"v":1.66810137406859e-18,"d":"1.67E-18"},-1.43858370231172,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of salicylic acid metabolic process (GO:0010337);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: ATPase-coupled arsenite transmembrane transporter activity (GO:0015446);; Biological Process: arsenite transport (GO:0015700);; Cellular Component: membrane (GO:0016020);; Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity (GO:0016756);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: cadmium ion binding (GO:0046870);; Biological Process: phytochelatin biosynthetic process (GO:0046938);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: phytochelatin transmembrane transporter activity (GO:0071992);; ","--","--","--","--","--","MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana OX=3702 GN=CAD1 PE=2 SV=1","--","--","PREDICTED: MACPF domain-containing protein CAD1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: multi-organism process (GO:0051704)"]
["Bra024686","Bra024686",1.771172,99,1.477645,86,1.296622,86,5.322345,232,18.684165,683,11.335373,521,{"v":2.18627656194701e-06,"d":"2.19E-06"},2.26888821484704,"up","--","--","Molecular Function: structural constituent of cell wall (GO:0005199);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: syncytium formation (GO:0006949);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Biological Process: plant-type cell wall modification involved in multidimensional cell growth (GO:0009831);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of stomatal movement (GO:0010119);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: expansin-A10 isoform X1 [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020)"]
["Bra007696","Bra007696",147.056808,13039,100.858864,9024,74.797142,6135,47.307941,2968,20.43438,1234,17.813095,1083,{"v":2.38797527237977e-07,"d":"2.39E-07"},-2.35240582859669,"down","--","--","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: protein binding (GO:0005515);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: xyloglucan biosynthetic process (GO:0009969);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: xyloglucan 6-xylosyltransferase activity (GO:0033843);; Molecular Function: UDP-xylosyltransferase activity (GO:0035252);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell wall organization (GO:0071555);; ","K08238|0|brp:103842076|K08238 xyloglucan 6-xylosyltransferase [EC:2.4.2.39] | (RefSeq) xyloglucan 6-xylosyltransferase 1","--","[GM]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis","galactosyl transferase GMA12/MNN10 family","Xyloglucan 6-xylosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=XXT1 PE=1 SV=1","S","Function unknown","PREDICTED: xyloglucan 6-xylosyltransferase 1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501)"]
["Bra009562","Bra009562",2.291711,201,2.54533,223,2.655956,212,10.151178,612,10.969092,635,12.509113,739,{"v":3.30218527832155e-11,"d":"3.30E-11"},1.56831977126753,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: circadian regulation of gene expression (GO:0032922);; Biological Process: histone H3 acetylation (GO:0043966);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: long-day photoperiodism, flowering (GO:0048574);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Myb-like DNA-binding domain","Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1","K","Transcription","BnaCnng03200D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Brassica_rapa_newGene_29638","--",28.330891,1116,70.907112,2819,57.669407,2102,16.653826,465,6.892758,185,8.879975,240,{"v":1.80199043129104e-07,"d":"1.80E-07"},-2.72190158474049,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra012104","Bra012104",6.441608,684,4.715622,503,5.999277,587,5.576144,387,3.225321,217,2.460313,178,0.00187310135090303,-1.20462644048413,"down","[T]","Signal transduction mechanisms","Molecular Function: guanylate cyclase activity (GO:0004383);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Biological Process: cGMP biosynthetic process (GO:0006182);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: defense response (GO:0006952);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: root development (GO:0048364);; Biological Process: post-embryonic animal organ development (GO:0048569);; Biological Process: developmental growth (GO:0048589);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: cellular developmental process (GO:0048869);; Cellular Component: cell periphery (GO:0071944);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana OX=3702 GN=WAKL21 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: wall-associated receptor kinase-like 21 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra013712","Bra013712",6.980755,563,17.230444,1459,17.842328,1376,1.382637,82,0.047118,4,0.074624,5,{"v":1.77722870885538e-06,"d":"1.78E-06"},-4.40238634204061,"down","[E]","Amino acid transport and metabolism","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: regulation of cell growth by extracellular stimulus (GO:0001560);; Molecular Function: L-alanine:2-oxoglutarate aminotransferase activity (GO:0004021);; Molecular Function: L-aspartate:2-oxoglutarate aminotransferase activity (GO:0004069);; Molecular Function: cystathionine beta-lyase activity (GO:0004121);; Molecular Function: L-tyrosine:2-oxoglutarate aminotransferase activity (GO:0004838);; Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: L-phenylalanine catabolic process (GO:0006559);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: tyrosine catabolic process (GO:0006572);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to microbial phytotoxin (GO:0010188);; Biological Process: vitamin E biosynthetic process (GO:0010189);; Cellular Component: membrane (GO:0016020);; Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Molecular Function: nicotianamine aminotransferase activity (GO:0033855);; Biological Process: 1-aminocyclopropane-1-carboxylate biosynthetic process (GO:0042218);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Cellular Component: apoplast (GO:0048046);; Biological Process: adventitious root development (GO:0048830);; Molecular Function: L-tryptophan:2-oxoglutarate aminotransferase activity (GO:0050362);; Molecular Function: S-alkylthiohydroximate lyase activity (GO:0080108);; ","K00815|0|brp:103861263|K00815 tyrosine aminotransferase [EC:2.6.1.5] | (RefSeq) probable aminotransferase TAT4","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Cysteine and methionine metabolism (ko00270);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Aminotransferase class I and II","Probable aminotransferase TAT4 OS=Arabidopsis thaliana OX=3702 GN=At4g23590 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: probable aminotransferase TAT4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: extracellular region (GO:0005576)"]
["Bra023722","Bra023722",0.888951,79,2.56223,253,2.447977,223,0.129551,11,0,0,0,0,{"v":9.08026977960152e-05,"d":"9.08E-05"},-4.20225716703684,"down","[S]","Function unknown","Cellular Component: cytoplasm (GO:0005737);; Biological Process: lipid biosynthetic process (GO:0008610);; Molecular Function: cyclopropane-fatty-acyl-phospholipid synthase activity (GO:0008825);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: methylation (GO:0032259);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00574|0|brp:103833648|K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] | (RefSeq) tuberculostearic acid methyltransferase UfaA1-like","--","--","--","Mycolic acid cyclopropane synthetase;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase small domain","--","M","Cell wall/membrane/envelope biogenesis","PREDICTED: uncharacterized protein LOC103833648 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra007655","Bra007655",0.388276,23,0.186423,14,0.185841,13,3.235511,127,9.980621,375,8.906369,332,{"v":1.15126123510767e-11,"d":"1.15E-11"},3.80511083144242,"up","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: protein peptidyl-prolyl isomerization (GO:0000413);; Biological Process: regulation of protein phosphorylation (GO:0001932);; Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein folding (GO:0006457);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: signal transduction (GO:0007165);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stromal thylakoid (GO:0009533);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: de-etiolation (GO:0009704);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: response to sucrose (GO:0009744);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: photorespiration (GO:0009853);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: response to far red light (GO:0010218);; Biological Process: NAD(P)H dehydrogenase complex assembly (GO:0010275);; Biological Process: response to mannitol (GO:0010555);; Biological Process: floral meristem determinacy (GO:0010582);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: protein sumoylation (GO:0016925);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: secondary metabolic process (GO:0019748);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: Cul3-RING ubiquitin ligase complex (GO:0031463);; Cellular Component: thylakoid lumen (GO:0031977);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: DNA endoreduplication (GO:0042023);; Molecular Function: peptide binding (GO:0042277);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of circadian rhythm (GO:0042752);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Molecular Function: protein histidine kinase binding (GO:0043424);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: root development (GO:0048364);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; ","K03768|5.36804e-169|brp:103842032|K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic","--","[O]","Posttranslational modification, protein turnover, chaperones","Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD","Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP20-3 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179);; cellular component: extracellular region (GO:0005576)"]
["Bra037481","Bra037481",9.54583,654,8.764549,588,9.119978,553,24.685529,1146,29.760765,1373,35.754922,1563,{"v":6.39149335241966e-08,"d":"6.39E-08"},1.13023611216584,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103874963 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra003256","Bra003256",2.535002,202,0.174335,14,0.490082,37,10.779785,607,24.446655,1325,23.963602,1307,{"v":2.61704826971653e-05,"d":"2.62E-05"},3.31241901996988,"up","[P]","Inorganic ion transport and metabolism","Molecular Function: DNA binding (GO:0003677);; Molecular Function: iron ion binding (GO:0005506);; Biological Process: rRNA processing (GO:0006364);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: chloroplast organization (GO:0009658);; Cellular Component: chloroplast inner membrane (GO:0009706);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: regulation of lipid metabolic process (GO:0019216);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Biological Process: light-independent chlorophyll biosynthetic process (GO:0036068);; Molecular Function: transition metal ion binding (GO:0046914);; Molecular Function: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (GO:0048529);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: regulation of tetrapyrrole metabolic process (GO:1901401);; ","K04035|0|brp:103830076|K04035 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] | (RefSeq) magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","--","--","Rubrerythrin","Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRD1 PE=1 SV=2","H","Coenzyme transport and metabolism","PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra028502","Bra028502",1.682769,294,0.997301,173,0.778988,126,0.436416,54,0.546404,65,0.379121,46,{"v":1.35950746512144e-05,"d":"1.36E-05"},-1.80144459317993,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: polysaccharide catabolic process (GO:0000272);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: amino acid transport (GO:0006865);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: xylem development (GO:0010089);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: cell wall modification (GO:0042545);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: regulation of pollen tube growth (GO:0080092);; Biological Process: positive regulation of secondary growth (GO:2000605);; ","--","--","[T]","Signal transduction mechanisms","TOM7 family","Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana OX=3702 GN=At5g41680 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probably inactive receptor-like protein kinase At5g41680 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra013523","Bra013523",224.01822,32633,270.36872,39789,263.327454,35737,78.072203,8123,58.117036,5842,53.039068,5411,{"v":7.28111231681402e-23,"d":"7.28E-23"},-2.5186314775266,"down","--",null,"Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: recognition of pollen (GO:0048544);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; S-locus glycoprotein domain;; PAN-like domain;; PAN domain","G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra013739","Bra013739",16.561672,563,31.248631,1071,26.092125,820,21.671598,521,13.274906,307,14.058478,328,0.00832428000512647,-1.13542742261877,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103861498 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra031690","Bra031690",171.607379,18541,252.455835,27057,218.226304,21692,65.944445,4998,31.525418,2339,28.684775,2127,{"v":6.83585001134671e-12,"d":"6.84E-12"},-2.81888723040179,"down","[H]","Coenzyme transport and metabolism","Biological Process: response to reactive oxygen species (GO:0000302);; Molecular Function: protein binding (GO:0005515);; Biological Process: protoporphyrinogen IX biosynthetic process (GO:0006782);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: glutamyl-tRNA reductase activity (GO:0008883);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to iron ion (GO:0010039);; Biological Process: response to chitin (GO:0010200);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Molecular Function: NADP binding (GO:0050661);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: iron ion homeostasis (GO:0055072);; Biological Process: oxidation-reduction process (GO:0055114);; ","K02492|0|brp:103843327|K02492 glutamyl-tRNA reductase [EC:1.2.1.70] | (RefSeq) glutamyl-tRNA reductase 2, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","--","--","Shikimate / quinate 5-dehydrogenase;; Glutamyl-tRNAGlu reductase, N-terminal domain;; Glutamyl-tRNAGlu reductase, dimerisation domain;; NADP oxidoreductase coenzyme F420-dependent;; TrkA-N domain;; NAD binding domain of 6-phosphogluconate dehydrogenase;; Ornithine cyclodeaminase/mu-crystallin family","Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HEMA2 PE=2 SV=2","H","Coenzyme transport and metabolism","BnaA09g57180D [Brassica napus]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007)"]
["Bra017465","Bra017465",25.538223,739,44.350357,1294,48.190792,1289,24.480528,501,23.149487,456,18.181696,361,0.000393155646119923,-1.38677509038661,"down","--","--","--","K16282|3.4922e-80|brp:103839504|K16282 E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RHA2B-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase RHA2B-like [Brassica rapa]","--"]
["Bra022460","Bra022460",41.702644,6596,37.536272,6111,36.219683,5533,21.537618,2466,16.031736,1711,16.882115,1835,{"v":1.8184354352627e-16,"d":"1.82E-16"},-1.64119419106196,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; ","--","--","[R]","General function prediction only","C2 domain","Synaptotagmin-3 OS=Arabidopsis thaliana OX=3702 GN=SYT3 PE=2 SV=1","S","Function unknown","PREDICTED: tricalbin-3-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152)"]
["Bra028207","Bra028207",0.529995,55,0.769528,80,0.810214,77,0,0,0,0,0,0,{"v":6.14849172398746e-11,"d":"6.15E-11"},-6.42935903842351,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: binding (GO:0005488);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Molecular Function: oxygen binding (GO:0019825);; Biological Process: pigment metabolic process (GO:0042440);; Biological Process: single-organism developmental process (GO:0044767);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: animal organ development (GO:0048513);; Biological Process: response to stimulus (GO:0050896);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Alkane hydroxylase MAH1 OS=Arabidopsis thaliana OX=3702 GN=CYP96A15 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: alkane hydroxylase MAH1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502)"]
["Bra008957","Bra008957",14.935268,628,16.962607,719,16.453757,640,57.567031,1710,64.583733,1847,66.970068,1924,{"v":3.37357401667211e-12,"d":"3.37E-12"},1.39515789145674,"up","[J]","Translation, ribosomal structure and biogenesis","Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: vesicle-mediated transport (GO:0016192);; ","--","--","[R]","General function prediction only","Domain of unknown function (DUF814)","--","S","Function unknown","PREDICTED: coiled-coil domain-containing protein 25-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra002842","Bra002842",14.95626,635,22.947148,981,23.64624,902,71.08273,2018,76.912633,2125,79.350678,2162,{"v":6.56541259749893e-05,"d":"6.57E-05"},1.22765233988963,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: postreplication repair (GO:0006301);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: membrane fusion (GO:0006944);; Biological Process: UV protection (GO:0009650);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: endosperm development (GO:0009960);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to iron ion (GO:0010039);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: protein deubiquitination (GO:0016579);; Cellular Component: UBC13-MMS2 complex (GO:0031372);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: histone H2B ubiquitination (GO:0033523);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: regulation of transport (GO:0051049);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to misfolded protein (GO:0051788);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin-conjugating enzyme","Ubiquitin-conjugating enzyme E2 30 OS=Arabidopsis thaliana OX=3702 GN=UBC30 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: ubiquitin-conjugating enzyme E2 30 isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991)"]
["Bra000092","Bra000092",0,0,0,0,0,0,0.811759,58,0.853374,54,1.209549,83,{"v":2.84007944304453e-10,"d":"2.84E-10"},6.24948626693548,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103857814 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra035823","Bra035823",2.268178,154,5.878659,401,4.034056,252,1.014294,49,2.455773,113,1.04308,49,0.00196364710673375,-1.88874450513993,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: proteolysis (GO:0006508);; Biological Process: defense response (GO:0006952);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: salicylic acid metabolic process (GO:0009696);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Molecular Function: aspartic-type peptidase activity (GO:0070001);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor N-terminal;; Xylanase inhibitor C-terminal;; Eukaryotic aspartyl protease","Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana OX=3702 GN=ASPG2 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra001241","Bra001241",36.996057,2663,119.530819,8913,124.094958,7611,6.427034,379,4.384823,243,4.755693,267,{"v":3.10428842075973e-17,"d":"3.10E-17"},-4.32163660626924,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: innate immune response (GO:0045087);; ","--","--","--","--","Cleavage site for pathogenic type III effector avirulence factor Avr","--","O","Posttranslational modification, protein turnover, chaperones","RPM1-interacting protein 4-like [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896)"]
["Bra019333","Bra019333",1.176637,128,0.6333,73,1.001413,78,0,0,0,0,0,0,{"v":7.87517406003733e-13,"d":"7.88E-13"},-6.81750801166596,"down","[H]","Coenzyme transport and metabolism","Biological Process: defense response to insect (GO:0002213);; Molecular Function: glutamate-cysteine ligase activity (GO:0004357);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: glutathione biosynthetic process (GO:0006750);; Biological Process: response to heat (GO:0009408);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indole phytoalexin biosynthetic process (GO:0009700);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: flower development (GO:0009908);; Biological Process: response to ozone (GO:0010193);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; ","K01919|0|brp:103861359|K01919 glutamate--cysteine ligase [EC:6.3.2.2] | (RefSeq) glutamate--cysteine ligase, chloroplastic-like","Cysteine and methionine metabolism (ko00270);; Glutathione metabolism (ko00480)","--","--","Glutamate-cysteine ligase family 2(GCS2)","Glutamate--cysteine ligase, chloroplastic OS=Brassica juncea OX=3707 GN=GSH1 PE=1 SV=1","H","Coenzyme transport and metabolism","PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra007096","Bra007096",2.509238,136,4.698544,249,4.678776,285,0,0,0.089372,5,0,0,{"v":1.32951390954713e-12,"d":"1.33E-12"},-5.98530936584916,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: alternative mRNA splicing, via spliceosome (GO:0000380);; Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Molecular Function: transcription antitermination factor activity, RNA binding (GO:0001072);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: rRNA processing (GO:0006364);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo sac development (GO:0009553);; Biological Process: pollen development (GO:0009555);; Biological Process: cold acclimation (GO:0009631);; Biological Process: response to salt stress (GO:0009651);; Biological Process: etioplast organization (GO:0009662);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: seed germination (GO:0009845);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: histone H3-K36 methylation (GO:0010452);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Biological Process: positive regulation of histone methylation (GO:0031062);; Biological Process: transcription antitermination (GO:0031564);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Molecular Function: histone methyltransferase activity (H3-K4 specific) (GO:0042800);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: carotenoid isomerase activity (GO:0046608);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: histone methyltransferase activity (H3-K36 specific) (GO:0046975);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: anther development (GO:0048653);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[R]","General function prediction only","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1","S","Function unknown","PREDICTED: probable RNA-binding protein ARP1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: extracellular region (GO:0005576);; biological process: multi-organism process (GO:0051704)"]
["Bra003006","Bra003006",98.330074,8784,128.010397,11600,126.281457,10497,43.961379,2800,60.75031,3699,59.576706,3674,{"v":1.07806648266233e-09,"d":"1.08E-09"},-1.64782927980936,"down","--","--","Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; ","--","--","[I]","Lipid transport and metabolism","START domain","--","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: uncharacterized protein LOC103844879 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra033159","Bra033159",0.378076,57,0.361454,54,0.229439,32,6.183983,636,2.065333,207,2.089635,208,{"v":3.57850802845061e-06,"d":"3.58E-06"},2.66872621810016,"up","[I]","Lipid transport and metabolism","Biological Process: long-chain fatty acid metabolic process (GO:0001676);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: long-chain fatty acid-CoA ligase activity (GO:0004467);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: wax biosynthetic process (GO:0010025);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: cutin biosynthetic process (GO:0010143);; Biological Process: response to ozone (GO:0010193);; Biological Process: lateral root formation (GO:0010311);; Molecular Function: very long-chain fatty acid-CoA ligase activity (GO:0031957);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to fungus (GO:0050832);; ","K01897|0|brp:103853538|K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] | (RefSeq) long chain acyl-CoA synthetase 5-like","Fatty acid biosynthesis (ko00061);; Fatty acid degradation (ko00071);; Fatty acid metabolism (ko01212);; Peroxisome (ko04146)","[I]","Lipid transport and metabolism","AMP-binding enzyme","Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana OX=3702 GN=LACS5 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: long chain acyl-CoA synthetase 5-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra019293","Bra019293",22.156681,2040,71.975719,6802,71.4118,6265,2.531903,162,0.52207,37,0.783376,55,{"v":2.09772204020219e-17,"d":"2.10E-17"},-5.52362963574041,"down","[E]","Amino acid transport and metabolism","Biological Process: regulation of cell growth by extracellular stimulus (GO:0001560);; Molecular Function: L-alanine:2-oxoglutarate aminotransferase activity (GO:0004021);; Molecular Function: L-aspartate:2-oxoglutarate aminotransferase activity (GO:0004069);; Molecular Function: cystathionine beta-lyase activity (GO:0004121);; Molecular Function: L-tyrosine:2-oxoglutarate aminotransferase activity (GO:0004838);; Molecular Function: binding (GO:0005488);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: L-phenylalanine catabolic process (GO:0006559);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: tyrosine catabolic process (GO:0006572);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to microbial phytotoxin (GO:0010188);; Biological Process: vitamin E biosynthetic process (GO:0010189);; Cellular Component: membrane (GO:0016020);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cell differentiation (GO:0030154);; Molecular Function: nicotianamine aminotransferase activity (GO:0033855);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Cellular Component: apoplast (GO:0048046);; Biological Process: adventitious root development (GO:0048830);; Molecular Function: L-tryptophan:2-oxoglutarate aminotransferase activity (GO:0050362);; Molecular Function: S-alkylthiohydroximate lyase activity (GO:0080108);; ","K00815|0|brp:103861409|K00815 tyrosine aminotransferase [EC:2.6.1.5] | (RefSeq) cystine lyase CORI3-like","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Cysteine and methionine metabolism (ko00270);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Aminotransferase class I and II","Probable aminotransferase TAT4 OS=Arabidopsis thaliana OX=3702 GN=At4g23590 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: cystine lyase CORI3-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: extracellular region (GO:0005576)"]
["Bra035755","Bra035755",35.4716,923,33.745358,886,25.972818,625,15.514956,286,7.298972,130,7.869526,141,{"v":6.36601562797654e-08,"d":"6.37E-08"},-2.11565004894815,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Biological Process: RNA methylation (GO:0001510);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Biological Process: nucleosome assembly (GO:0006334);; Biological Process: cell proliferation (GO:0008283);; Biological Process: DNA mediated transformation (GO:0009294);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11251|1.35008e-73|brp:103869292|K11251 histone H2A | (RefSeq) probable histone H2A.2","--","[B]","Chromatin structure and dynamics","C-terminus of histone H2A;; Core histone H2A/H2B/H3/H4;; Histone-like transcription factor (CBF/NF-Y) and archaeal histone","Probable histone H2A.2 OS=Arabidopsis thaliana OX=3702 GN=At3g20670 PE=1 SV=1","B","Chromatin structure and dynamics","PREDICTED: probable histone H2A.2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: response to stimulus (GO:0050896)"]
["Bra040238","Bra040238",5.09577,552,4.576489,561,4.062946,468,3.505786,274,2.652388,230,3.368091,270,{"v":9.47651626677229e-08,"d":"9.48E-08"},-1.07375564620565,"down","[K]","Transcription","Cellular Component: plasma membrane (GO:0005886);; Biological Process: defense response (GO:0006952);; Biological Process: immune response (GO:0006955);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: single organism signaling (GO:0044700);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: organic substance transport (GO:0071702);; ","--","--","[R]","General function prediction only","Carbohydrate-binding protein of the ER;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain","Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 OS=Arabidopsis thaliana OX=3702 GN=At2g14440 PE=3 SV=1","S","Function unknown","PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra007202","Bra007202",40.737312,2696,65.218346,4355,49.268368,3016,29.291458,1371,16.693251,753,14.245898,646,{"v":3.29769158871182e-06,"d":"3.30E-06"},-1.88116081329146,"down","--",null,"Biological Process: nuclear division (GO:0000280);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: nucleolus organization (GO:0007000);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: meiosis I (GO:0007127);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: regulation of asymmetric cell division (GO:0009786);; Biological Process: seed germination (GO:0009845);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: meristem structural organization (GO:0009933);; Cellular Component: cell surface (GO:0009986);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: response to chitin (GO:0010200);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: lateral root formation (GO:0010311);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: pollen tube reception (GO:0010483);; Cellular Component: apical plasma membrane (GO:0016324);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: lipid storage (GO:0019915);; Cellular Component: endocytic vesicle (GO:0030139);; Biological Process: cellular polysaccharide biosynthetic process (GO:0033692);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: cell wall biogenesis (GO:0042546);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: filiform apparatus (GO:0043680);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: cotyledon development (GO:0048825);; Biological Process: root cap development (GO:0048829);; Biological Process: response to freezing (GO:0050826);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: chromosome organization (GO:0051276);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Cellular Component: pollen tube tip (GO:0090404);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425)"]
["Bra030190","Bra030190",5.540975,469,12.360315,1056,11.460669,897,3.622986,217,0.667759,39,0.256456,15,0.000760858489299872,-2.83825361837438,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: iron ion transport (GO:0006826);; Molecular Function: O-acyltransferase activity (GO:0008374);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: root hair elongation (GO:0048767);; ","--","--","--","--","Transferase family","BAHD acyltransferase BIA1 OS=Arabidopsis thaliana OX=3702 GN=BIA1 PE=2 SV=1","S","Function unknown","PREDICTED: BAHD acyltransferase At5g47980-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra034736","Bra034736",67.911522,8447,85.439615,10523,85.022603,9966,44.345809,4047,47.176003,4035,47.024539,3942,{"v":2.96542389468284e-09,"d":"2.97E-09"},-1.32378795242653,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: phospholipid transport (GO:0015914);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[DKT]","Cell cycle control, cell division, chromosome partitioning;; Transcription;; Signal transduction mechanisms","LEM3 (ligand-effect modulator 3) family / CDC50 family","ALA-interacting subunit 1 OS=Arabidopsis thaliana OX=3702 GN=ALIS1 PE=1 SV=1","DKT","Cell cycle control, cell division, chromosome partitioning;; Transcription;; Signal transduction mechanisms","PREDICTED: ALA-interacting subunit 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra003835","Bra003835",0.040184,2,0.129943,7,0.457617,20,4.00062,129,10.194781,316,6.846985,215,{"v":1.2227948055959e-06,"d":"1.22E-06"},3.84331907835012,"up","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: protein peptidyl-prolyl isomerization (GO:0000413);; Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; Molecular Function: FK506 binding (GO:0005528);; Biological Process: protein folding (GO:0006457);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: organelle organization (GO:0006996);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627);; Biological Process: starch biosynthetic process (GO:0019252);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","FKBP-type peptidyl-prolyl cis-trans isomerase","Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-3 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)"]
["Bra023704","Bra023704",4.624143,355,8.95926,693,9.086222,649,5.280647,287,4.576089,241,2.800373,153,0.00408117437602163,-1.35838507368637,"down","--","--","Cellular Component: cell part (GO:0044464);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Xylanase inhibitor C-terminal;; Xylanase inhibitor N-terminal","Basic 7S globulin 2 OS=Glycine max OX=3847 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: basic 7S globulin 2-like [Brassica rapa]","cellular component: cell part (GO:0044464)"]
["Bra025989","Bra025989",1.835281,330,0.673381,134,1.195993,157,3.322394,457,5.917675,802,4.560418,646,0.000271390943140605,1.56357118009656,"up","[D]","Cell cycle control, cell division, chromosome partitioning","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: translation initiation factor activity (GO:0003743);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: translation (GO:0006412);; Biological Process: translational initiation (GO:0006413);; Molecular Function: translation factor activity, RNA binding (GO:0008135);; Biological Process: nucleotide metabolic process (GO:0009117);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: chloroplast relocation (GO:0009902);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: regulation of proton transport (GO:0010155);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance catabolic process (GO:1901575);; ","K02519|0|brp:103872511|K02519 translation initiation factor IF-2 | (RefSeq) translation initiation factor IF-2, chloroplastic-like","--","[J]","Translation, ribosomal structure and biogenesis","Elongation factor Tu GTP binding domain;; Translation-initiation factor 2;; 50S ribosome-binding GTPase;; Ras family;; Translation initiation factor IF-2, N-terminal region","Translation initiation factor IF-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g17220 PE=2 SV=2","J","Translation, ribosomal structure and biogenesis","PREDICTED: translation initiation factor IF-2, chloroplastic-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra028088","Bra028088",38.541882,1997,22.047411,1153,20.629551,989,17.286135,634,9.470379,335,9.718515,345,{"v":1.61836087900633e-05,"d":"1.62E-05"},-1.63532850529167,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: response to arsenic-containing substance (GO:0046685);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: root hair cell development (GO:0080147);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH80 OS=Arabidopsis thaliana OX=3702 GN=BHLH80 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor bHLH80 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra025951","Bra025951",25.797022,7740,45.888487,12950,43.846395,11099,26.752365,4899,23.015985,3773,12.011582,2323,{"v":9.99402066511447e-05,"d":"9.99E-05"},-1.57039482701911,"down","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: peptide receptor activity (GO:0001653);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: guanylate cyclase activity (GO:0004383);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: ion transport (GO:0006811);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to wounding (GO:0009611);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development (GO:0009790);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: response to chitin (GO:0010200);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane receptor protein kinase activity (GO:0019199);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: peptide binding (GO:0042277);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: innate immune response (GO:0045087);; Biological Process: stamen development (GO:0048443);; Biological Process: meristem development (GO:0048507);; Biological Process: developmental growth (GO:0048589);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anther development (GO:0048653);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Molybdate transporter of MFS superfamily;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana OX=3702 GN=PEPR2 PE=1 SV=1","S","Function unknown","PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704);; cellular component: organelle (GO:0043226);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra036460","Bra036460",0.464786,109,0.311405,79,0.370997,77,1.71219,251,1.32977,220,0.956371,158,0.000400888873761261,1.18493487869211,"up","--","--","Molecular Function: motor activity (GO:0003774);; Molecular Function: actin binding (GO:0003779);; Molecular Function: enzyme inhibitor activity (GO:0004857);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of carbohydrate metabolic process (GO:0006109);; Biological Process: protein import into nucleus (GO:0006606);; Biological Process: cellular iron ion homeostasis (GO:0006879);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: sister chromatid cohesion (GO:0007062);; Molecular Function: enzyme activator activity (GO:0008047);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: response to cold (GO:0009409);; Cellular Component: cell plate (GO:0009504);; Cellular Component: phragmoplast (GO:0009524);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: gravitropism (GO:0009630);; Biological Process: plastid organization (GO:0009657);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: embryonic pattern specification (GO:0009880);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: trichome morphogenesis (GO:0010090);; Cellular Component: stromule (GO:0010319);; Biological Process: seed maturation (GO:0010431);; Cellular Component: myosin complex (GO:0016459);; Molecular Function: Rab GTPase binding (GO:0017137);; Biological Process: actin filament-based movement (GO:0030048);; Molecular Function: GTP-dependent protein binding (GO:0030742);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: positive regulation of programmed cell death (GO:0043068);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: regulation of cell differentiation (GO:0045595);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Cellular Component: apoplast (GO:0048046);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: gynoecium development (GO:0048467);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell division (GO:0051301);; Biological Process: Golgi localization (GO:0051645);; Biological Process: mitochondrion localization (GO:0051646);; Biological Process: peroxisome localization (GO:0060151);; Biological Process: leaf pavement cell development (GO:0090436);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance catabolic process (GO:1901575);; ","K10357|0|brp:103828189|K10357 myosin V | (RefSeq) myosin-13-like","--","[Z]","Cytoskeleton","Myosin head (motor domain);; DIL domain;; IQ calmodulin-binding motif;; Myosin N-terminal SH3-like domain","Myosin-13 OS=Arabidopsis thaliana OX=3702 GN=XI-G PE=3 SV=1","Z","Cytoskeleton","PREDICTED: myosin-13-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: reproduction (GO:0000003);; cellular component: macromolecular complex (GO:0032991);; cellular component: extracellular region (GO:0005576);; biological process: growth (GO:0040007)"]
["Bra033082","Bra033082",5.255703,401,7.116928,519,7.168903,482,2.522611,162,1.857779,114,2.878452,145,{"v":1.3461372315257e-08,"d":"1.35E-08"},-1.77561839645721,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: RNA splicing (GO:0008380);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Cellular Component: protein complex (GO:0043234);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: intracellular part (GO:0044424);; Cellular Component: cytoplasmic part (GO:0044444);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","--","--","--","Uncharacterized protein At5g39570 OS=Arabidopsis thaliana OX=3702 GN=At5g39570 PE=1 SV=1","S","Function unknown","uncharacterized protein At5g39570-like [Brassica napus] ","molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488)"]
["Bra036448","Bra036448",3.160372,262,1.567518,142,1.925344,153,9.423999,594,6.600962,379,9.770412,575,{"v":3.00786180422424e-05,"d":"3.01E-05"},1.42072089414651,"up","[E]","Amino acid transport and metabolism","Molecular Function: cysteine synthase activity (GO:0004124);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cysteine biosynthetic process from serine (GO:0006535);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chromoplast (GO:0009509);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: photosynthetic acclimation (GO:0009643);; Biological Process: fruit ripening, climacteric (GO:0009836);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: photosynthesis (GO:0015979);; Molecular Function: transferase activity (GO:0016740);; Biological Process: cyanide metabolic process (GO:0019499);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Cellular Component: thylakoid lumen (GO:0031977);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: beta-pyrazolylalanine synthase activity (GO:0047458);; Cellular Component: apoplast (GO:0048046);; Molecular Function: L-3-cyanoalanine synthase activity (GO:0050017);; Molecular Function: pyrazolylalanine synthase activity (GO:0050234);; Molecular Function: L-mimosine synthase activity (GO:0050461);; Biological Process: regulation of superoxide metabolic process (GO:0090322);; ","K01738|0|brp:103828203|K01738 cysteine synthase A [EC:2.5.1.47] | (RefSeq) probable S-sulfocysteine synthase, chloroplastic","Cysteine and methionine metabolism (ko00270);; Sulfur metabolism (ko00920);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Pyridoxal-phosphate dependent enzyme","Probable S-sulfocysteine synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g03630 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: probable S-sulfocysteine synthase, chloroplastic [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra035070","Bra035070",273.642792,23466,334.013062,28904,306.504913,24315,265.690765,16119,117.754936,6877,114.151733,6708,0.000993792665329777,-1.39579053072743,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: cellular process (GO:0009987);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: carbohydrate binding (GO:0030246);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single-organism transport (GO:0044765);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","--","D-mannose binding lectin","EP1-like glycoprotein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g78850 PE=1 SV=1","S","Function unknown","PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra001952","Bra001952",35.820353,3549,109.845647,11044,104.341912,9679,6.802412,511,17.306168,1167,16.039668,1095,{"v":3.49799011837342e-08,"d":"3.50E-08"},-3.05131643000827,"down","[C]","Energy production and conversion","Molecular Function: retinal dehydrogenase activity (GO:0001758);; Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity (GO:0004028);; Molecular Function: aldehyde dehydrogenase (NAD) activity (GO:0004029);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cytosol (GO:0005829);; Molecular Function: betaine-aldehyde dehydrogenase activity (GO:0008802);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: leucoplast (GO:0009516);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salt stress (GO:0009651);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: coniferyl-aldehyde dehydrogenase activity (GO:0050269);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic substance metabolic process (GO:0071704);; ","K12355|0|brp:103860041|K12355 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] | (RefSeq) aldehyde dehydrogenase family 2 member C4","Phenylpropanoid biosynthesis (ko00940)","[C]","Energy production and conversion","Aldehyde dehydrogenase family","Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana OX=3702 GN=ALDH2C4 PE=1 SV=2","C","Energy production and conversion","PREDICTED: aldehyde dehydrogenase family 2 member C4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179)"]
["Bra006343","Bra006343",5.855078,594,7.831267,865,8.030307,770,6.540042,467,3.93636,284,3.413369,241,0.0024037737964699,-1.21397087325146,"down","[N]","Cell motility","Cellular Component: Golgi membrane (GO:0000139);; Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Biological Process: DNA mediated transformation (GO:0009294);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: cellulose synthase activity (GO:0016759);; Biological Process: cell wall biogenesis (GO:0042546);; Molecular Function: glucomannan 4-beta-mannosyltransferase activity (GO:0047259);; Molecular Function: mannan synthase activity (GO:0051753);; ","K13680|0|brp:103856186|K13680 beta-mannan synthase [EC:2.4.1.32] | (RefSeq) probable mannan synthase 11","--","--","--","Glycosyltransferase like family 2;; Glycosyl transferase family group 2;; Glycosyl transferase family 2;; Glycosyl transferase family 21","Probable mannan synthase 15 OS=Arabidopsis thaliana OX=3702 GN=CSLA15 PE=3 SV=2","M","Cell wall/membrane/envelope biogenesis","PREDICTED: probable mannan synthase 11 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra008947","Bra008947",40.854774,3133,49.932355,3899,51.828533,3613,20.836148,1094,19.163242,991,17.743474,947,{"v":2.10679824707173e-16,"d":"2.11E-16"},-1.86272068574801,"down","[I]","Lipid transport and metabolism","Biological Process: response to chitin (GO:0010200);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","[I]","Lipid transport and metabolism","Serine aminopeptidase, S33;; Alpha/beta hydrolase family;; alpha/beta hydrolase fold","Caffeoylshikimate esterase OS=Arabidopsis thaliana OX=3702 GN=CSE PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: caffeoylshikimate esterase [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra024593","Bra024593",0.089144,8,0,0,0.160559,20,2.188209,204,4.813422,422,4.314874,343,{"v":2.28840039607513e-06,"d":"2.29E-06"},4.20236953779748,"up","--","--","Biological Process: cell fate specification (GO:0001708);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: synapsis (GO:0007129);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: response to ethylene (GO:0009723);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: specification of carpel identity (GO:0010094);; Biological Process: response to gamma radiation (GO:0010332);; Biological Process: regulation of telomere maintenance (GO:0032204);; Biological Process: multicellular organism reproduction (GO:0032504);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Biological Process: telomere maintenance in response to DNA damage (GO:0043247);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: meiotic chromosome segregation (GO:0045132);; Biological Process: floral whorl development (GO:0048438);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: negative regulation of biological process (GO:0048519);; ","--","--","[K]","Transcription","KNOX2 domain;; KNOX1 domain","Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1","K","Transcription","BnaA09g31100D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra030094","Bra030094",0.998123,35,1.034206,37,1.329243,43,3.741705,92,3.38813,81,4.182697,100,0.00529372385910134,1.15091059015338,"up","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: embryonic pattern specification (GO:0009880);; Biological Process: specification of animal organ axis polarity (GO:0010084);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: response to chitin (GO:0010200);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: membrane (GO:0016020);; Cellular Component: nuclear body (GO:0016604);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: cotyledon development (GO:0048825);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: cellular response to freezing (GO:0071497);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor 12-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: membrane-enclosed lumen (GO:0031974);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra028826","Bra028826",0,0,0.055064,4,0.151086,10,1.679988,81,3.995321,173,2.287066,107,{"v":2.74374205972052e-05,"d":"2.74E-05"},3.78996006495511,"up","[IR]","Lipid transport and metabolism;; General function prediction only","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: extracellular region (GO:0005576);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: intracellular protein transport (GO:0006886);; Molecular Function: lipase activity (GO:0016298);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana OX=3702 GN=At5g03610 PE=2 SV=1","S","Function unknown","PREDICTED: GDSL esterase/lipase At5g03610-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra010697","Bra010697",7.684818,342,17.665821,793,16.039145,660,5.666963,179,3.326813,101,2.508401,77,{"v":1.18569418944576e-05,"d":"1.19E-05"},-2.31012692717006,"down","--","--","Biological Process: single-organism cellular process (GO:0044763);; Biological Process: regulation of biological process (GO:0050789);; ","--","--","--","--","--","--","--","--","PREDICTED: protein PXR1-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra034140","Bra034140",12.447695,1483,22.115732,2659,21.533293,2373,10.947273,923,2.950574,240,3.31397,271,0.000369889954661014,-2.13821367624138,"down","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: extracellular region (GO:0005576);; Biological Process: amino acid transport (GO:0006865);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; ","K01051|0|brp:103847348|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase/pectinesterase inhibitor 25","Pentose and glucuronate interconversions (ko00040);; Starch and sucrose metabolism (ko00500)","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana OX=3702 GN=PME25 PE=2 SV=1","G","Carbohydrate transport and metabolism","probable pectinesterase/pectinesterase inhibitor 25 isoform X3 [Brassica napus]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra039196","Bra039196",3.680516,591,1.241862,205,1.327995,194,6.977828,787,7.188414,800,7.409808,815,0.00624075700874596,1.24957426977701,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: chromatin silencing (GO:0006342);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","--","--","--","--","Filament-like plant protein, long coiled-coil","Filament-like plant protein 7 OS=Arabidopsis thaliana OX=3702 GN=FPP7 PE=3 SV=2","S","Function unknown","PREDICTED: filament-like plant protein 7 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Brassica_rapa_newGene_18463","--",2.063322,182,1.087579,111,1.457809,120,3.992674,269,6.085747,368,6.526123,409,{"v":8.60855554025688e-05,"d":"8.61E-05"},1.28813900072183,"up","--","--","--","--","--","--","--","--","O-fucosyltransferase 31 OS=Arabidopsis thaliana OX=3702 GN=OFUT31 PE=2 SV=1","L","Replication, recombination and repair","PsRT17-1 like protein [Arabidopsis thaliana] ","--"]
["Bra036952","Bra036952",0.121779,30,0.118658,28,0.067435,8,1.984647,244,1.241359,176,1.531817,211,{"v":1.32773385874568e-09,"d":"1.33E-09"},3.08888254589875,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell death (GO:0008219);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: systemic acquired resistance (GO:0009627);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular process (GO:0009987);; Cellular Component: stromule (GO:0010319);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: single-organism process (GO:0044699);; Cellular Component: apoplast (GO:0048046);; Biological Process: chaperone mediated protein folding requiring cofactor (GO:0051085);; ","K04077|7.20621e-12|bna:106369620|K04077 chaperonin GroEL | (RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like","RNA degradation (ko03018)","[O]","Posttranslational modification, protein turnover, chaperones","--","Chaperonin 60 subunit beta 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B3 PE=1 SV=1","--","--","BnaA10g08720D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; cellular component: macromolecular complex (GO:0032991);; cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152)"]
["Bra033613","Bra033613",0.876374,62,1.781053,126,0.901046,59,0.204554,11,0,0,0,0,0.00519814302328236,-3.19098224080301,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: glutamate-cysteine ligase activity (GO:0004357);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: glutathione biosynthetic process (GO:0006750);; Biological Process: amino acid transport (GO:0006865);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indole phytoalexin biosynthetic process (GO:0009700);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: flower development (GO:0009908);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cellulose biosynthetic process (GO:0030244);; Molecular Function: cinnamyl-alcohol dehydrogenase activity (GO:0045551);; Molecular Function: mannitol dehydrogenase activity (GO:0046029);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: aryl-alcohol dehydrogenase (NADP+) activity (GO:0047681);; Molecular Function: geraniol dehydrogenase activity (GO:0047924);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: sinapyl alcohol dehydrogenase activity (GO:0052747);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00083|0|brp:103828048|K00083 cinnamyl-alcohol dehydrogenase [EC:1.1.1.195] | (RefSeq) CADb; probable cinnamyl alcohol dehydrogenase 9","Phenylpropanoid biosynthesis (ko00940)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Alcohol dehydrogenase GroES-like domain;; Zinc-binding dehydrogenase","Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana OX=3702 GN=CAD9 PE=2 SV=2","C","Energy production and conversion","PREDICTED: probable cinnamyl alcohol dehydrogenase 9 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: extracellular region (GO:0005576);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra027703","Bra027703",8.476103,892,18.145783,1742,20.887142,1985,11.288577,833,7.538169,532,8.276859,597,0.00498541295220428,-1.29170457934326,"down","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: calcium-dependent protein serine/threonine phosphatase activity (GO:0004723);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: detection of calcium ion (GO:0005513);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: calcineurin complex (GO:0005955);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: potassium ion import (GO:0010107);; Biological Process: stomatal movement (GO:0010118);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: calcium-mediated signaling (GO:0019722);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: cellular potassium ion homeostasis (GO:0030007);; Cellular Component: aleurone grain membrane (GO:0032578);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: hypotonic salinity response (GO:0042539);; Biological Process: regulation of potassium ion transport (GO:0043266);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell wall organization (GO:0071555);; Biological Process: regulation of ion homeostasis (GO:2000021);; ","K06268|8.34164e-155|brp:103838197|K06268 serine/threonine-protein phosphatase 2B regulatory subunit | (RefSeq) calcineurin B-like protein 8","--","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain;; EF hand;; EF-hand domain pair;; EF-hand domain pair","Calcineurin B-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CBL8 PE=1 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calcineurin B-like protein 8 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501)"]
["Bra004934","Bra004934",2.719623,455,0.683668,111,0.436137,79,10.199844,1177,5.667773,644,7.713062,831,0.00235315950437921,1.93929538873452,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein acetylation (GO:0006473);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: root development (GO:0048364);; Biological Process: maintenance of floral organ identity (GO:0048497);; Molecular Function: DBD domain binding (GO:0050692);; ","K09338|0|brp:103866919|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein HDG1-like","--","--","--","START domain;; Homeobox domain","Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana OX=3702 GN=HDG1 PE=2 SV=1","K","Transcription","PREDICTED: homeobox-leucine zipper protein HDG1-like isoform X1 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502)"]
["Bra009875","Bra009875",13.207957,905,38.353868,2663,34.877677,2216,12.51154,623,5.322026,250,6.636174,314,{"v":6.41347398343419e-05,"d":"6.41E-05"},-2.26024604100442,"down","[T]","Signal transduction mechanisms","Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: iron ion transport (GO:0006826);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana OX=3702 GN=At5g26010 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 72 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896)"]
["Bra000467","Bra000467",12.787502,353,24.120064,671,23.58798,602,3.478989,68,7.540704,142,4.577469,87,{"v":4.64714182821941e-07,"d":"4.65E-07"},-2.43157290704716,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103858262 [Brassica rapa]","--"]
["Bra027461","Bra027461",13.797939,2557,19.839807,3687,18.797226,3184,11.017699,1434,9.886931,1257,9.052808,1129,{"v":1.23257232387591e-06,"d":"1.23E-06"},-1.35813323900302,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: phosphatidate phosphatase activity (GO:0008195);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Cellular Component: apoplast (GO:0048046);; ","K15728|0|brp:103839275|K15728 phosphatidate phosphatase LPIN [EC:3.1.3.4] | (RefSeq) phosphatidate phosphatase PAH2-like","Glycerolipid metabolism (ko00561);; Glycerophospholipid metabolism (ko00564)","[NI]","Cell motility;; Lipid transport and metabolism","LNS2 (Lipin/Ned1/Smp2);; lipin, N-terminal conserved region;; Lipin/Ned1/Smp2 multi-domain protein middle domain","Phosphatidate phosphatase PAH2 OS=Arabidopsis thaliana OX=3702 GN=PAH2 PE=1 SV=1","S","Function unknown","PREDICTED: phosphatidate phosphatase PAH2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576)"]
["Bra018469","Bra018469",5.771739,840,12.446539,1817,11.999256,1606,32.749558,3348,114.127268,11236,106.250654,10518,{"v":3.23362298714397e-05,"d":"3.23E-05"},2.33801922911088,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Biological Process: nitric oxide biosynthetic process (GO:0006809);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Molecular Function: diamine oxidase activity (GO:0052597);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to azide (GO:0097185);; ","K00276|0|brp:103868133|K00276 primary-amine oxidase [EC:1.4.3.21] | (RefSeq) primary amine oxidase","Glycine, serine and threonine metabolism (ko00260);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; beta-Alanine metabolism (ko00410);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Copper amine oxidase, enzyme domain;; Copper amine oxidase, N3 domain;; Copper amine oxidase, N2 domain","Primary amine oxidase OS=Arabidopsis thaliana OX=3702 GN=At1g62810 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: primary amine oxidase [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra034263","Bra034263",1.48368,88,2.16621,133,1.668341,116,6.48897,229,7.360456,288,9.477648,375,0.00138262413590729,1.29874139771946,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103864680 isoform X1 [Brassica rapa]","--"]
["Bra032599","Bra032599",0.426552,30,0.221895,18,0.286351,23,1.460843,66,1.167188,56,1.097619,59,0.00664344913886612,1.26337425149905,"up","[S]","Function unknown","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","Polyketide cyclase / dehydrase and lipid transport;; Polyketide cyclase / dehydrase and lipid transport","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103843749 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra039705","Bra039705",3.385422,417,1.207397,150,1.215286,139,0.090025,8,0,0,0,0,{"v":1.06128796936604e-07,"d":"1.06E-07"},-5.10143892248001,"down","[G]","Carbohydrate transport and metabolism","Biological Process: defense response to insect (GO:0002213);; Molecular Function: glucan exo-1,3-beta-glucosidase activity (GO:0004338);; Molecular Function: beta-galactosidase activity (GO:0004565);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: regulation of stomatal movement (GO:0010119);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cellular component organization (GO:0016043);; Biological Process: carbohydrate catabolic process (GO:0016052);; Molecular Function: thioglucosidase activity (GO:0019137);; Biological Process: glucosinolate catabolic process (GO:0019762);; Cellular Component: cytosolic ribosome (GO:0022626);; Molecular Function: beta-D-fucosidase activity (GO:0033907);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: beta-L-arabinosidase activity (GO:0047701);; Cellular Component: apoplast (GO:0048046);; Molecular Function: beta-gentiobiose beta-glucosidase activity (GO:0080083);; ","K01237|0|brp:103833480|K01237 myrosinase [EC:3.2.1.147] | (RefSeq) MyroA, myrosinase; myrosinase MA1","Tryptophan metabolism (ko00380)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Myrosinase MA1 OS=Sinapis alba OX=3728 PE=1 SV=2","G","Carbohydrate transport and metabolism","BnaA08g05540D [Brassica napus]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra029051","Bra029051",5.180395,265,2.341704,121,2.43566,115,16.624727,601,16.216597,564,18.13949,635,{"v":3.24757028238586e-07,"d":"3.25E-07"},1.79919212312963,"up","--","--","Biological Process: RNA methylation (GO:0001510);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism process (GO:0044699);; Biological Process: organic substance metabolic process (GO:0071704);; ","K15414|0|brp:103857063|K15414 complement component 1 Q subcomponent-binding protein, mitochondrial | (RefSeq) uncharacterized protein At2g39795, mitochondrial-like","--","[C]","Energy production and conversion","Mitochondrial glycoprotein","Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39795 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra023967","Bra023967",199.033966,7028,188.321686,6711,198.055527,6470,90.26281,2255,93.743912,2255,92.409576,2236,{"v":2.73425916315744e-38,"d":"2.73E-38"},-1.63172856157143,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: proline-rich protein 36 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra016216","Bra016216",33.731218,3997,36.662096,4511,35.770509,4090,15.819631,1352,14.2309,1286,12.743141,1171,{"v":3.01192466553145e-21,"d":"3.01E-21"},-1.77566209664215,"down","--","--","--","--","--","--","--","Domain of unknown function DUF220","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103831578 isoform X2 [Brassica rapa] ","--"]
["Bra010384","Bra010384",1.037475,201,1.171519,184,0.483719,138,1.458617,318,2.228421,403,2.5145,464,{"v":7.82575644390003e-05,"d":"7.83E-05"},1.1272582875776,"up","[R]","General function prediction only","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: cellular process (GO:0009987);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: mRNA modification (GO:0016556);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: organic substance metabolic process (GO:0071704);; ","K03255|0|brp:103834776|K03255 protein TIF31 | (RefSeq) protein TSS-like","--","[R]","General function prediction only","Tetratricopeptide repeat;; Translation initiation factor eIF3 subunit 135;; Tetratricopeptide repeat;; Mitochondrial function, CLU-N-term;; Tetratricopeptide repeat;; Clustered mitochondria","Protein TSS OS=Arabidopsis thaliana OX=3702 GN=TSS PE=1 SV=1","S","Function unknown","PREDICTED: protein TSS-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra001034","Bra001034",1.594697,318,1.738913,350,2.171145,398,8.450634,1185,8.493358,1140,11.9022,1617,{"v":1.04275422734876e-09,"d":"1.04E-09"},1.79122269645468,"up","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of monopolar cell growth (GO:0051513);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","Domain of unknown function (DUF4378)","Protein LONGIFOLIA 2 OS=Arabidopsis thaliana OX=3702 GN=LNG2 PE=1 SV=1","Z","Cytoskeleton","PREDICTED: protein LONGIFOLIA 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: response to stimulus (GO:0050896)"]
["Bra039424","Bra039424",20.310681,2445,24.987412,2915,26.546812,2815,14.984496,1261,7.896407,641,9.51569,803,{"v":1.40885749641637e-06,"d":"1.41E-06"},-1.63480041724507,"down","[T]","Signal transduction mechanisms","Cellular Component: protein phosphatase type 1 complex (GO:0000164);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to chitin (GO:0010200);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; ","K06269|0|brp:103870808|K06269 serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] | (RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9-like","mRNA surveillance pathway (ko03015)","[TR]","Signal transduction mechanisms;; General function prediction only","Calcineurin-like phosphoesterase;; Serine-threonine protein phosphatase N-terminal domain","Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana OX=3702 GN=TOPP9 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 9-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra022232","Bra022232",10.386079,1625,23.359293,3707,25.599067,3598,2.602508,296,0.537319,63,0.77169,88,{"v":1.14739692541332e-10,"d":"1.15E-10"},-4.09695516383134,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: ion channel activity (GO:0005216);; Molecular Function: intracellular cyclic nucleotide activated cation channel activity (GO:0005221);; Molecular Function: potassium channel activity (GO:0005267);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ion transport (GO:0006811);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to nematode (GO:0009624);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: metal ion transport (GO:0030001);; Molecular Function: cyclic nucleotide binding (GO:0030551);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: pollen tube development (GO:0048868);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: transmembrane transport (GO:0055085);; ","K05391|0|brp:103869661|K05391 cyclic nucleotide gated channel, other eukaryote | (RefSeq) putative cyclic nucleotide-gated ion channel 19","Plant-pathogen interaction (ko04626)","[PT]","Inorganic ion transport and metabolism;; Signal transduction mechanisms","Ion transport protein","Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis thaliana OX=3702 GN=CNGC19 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: putative cyclic nucleotide-gated ion channel 19 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra030098","Bra030098",9.38423,1819,8.944195,1750,8.685239,1558,6.892502,946,6.146792,812,5.328736,708,{"v":1.90574649890267e-09,"d":"1.91E-09"},-1.10129683339536,"down","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: regionalization (GO:0003002);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: gravitropism (GO:0009630);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: embryonic pattern specification (GO:0009880);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: endosperm development (GO:0009960);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: lateral root morphogenesis (GO:0010102);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: microsporocyte differentiation (GO:0010480);; Biological Process: regulation of cell cycle process (GO:0010564);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: beta-amylase activity (GO:0016161);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: protein self-association (GO:0043621);; Biological Process: post-translational protein modification (GO:0043687);; Biological Process: innate immune response (GO:0045087);; Biological Process: pectin catabolic process (GO:0045490);; Biological Process: regulation of cell differentiation (GO:0045595);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: gametophyte development (GO:0048229);; Biological Process: anther development (GO:0048653);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cotyledon development (GO:0048825);; Biological Process: cell division (GO:0051301);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: regulation of seed maturation (GO:2000034);; ","K00924|0|brp:103829009|K00924 [EC:2.7.1.-] | (RefSeq) receptor-like protein kinase HSL1","--","--","--","Protein kinase domain;; Leucine rich repeat;; Protein tyrosine kinase;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=2 SV=1","S","Function unknown","PREDICTED: receptor-like protein kinase HSL1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; cellular component: organelle part (GO:0044422);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: reproduction (GO:0000003);; cellular component: membrane part (GO:0044425);; biological process: immune system process (GO:0002376)"]
["Bra021708","Bra021708",13.904173,682,25.391073,1271,29.214463,1333,14.797538,515,8.418624,283,9.112095,307,0.00045732395566278,-1.61121654550484,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: defense response (GO:0006952);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|2.12475e-179|brp:103865111|K09422 myb proto-oncogene protein, plant | (RefSeq) myb-related protein Myb4","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB14 OS=Arabidopsis thaliana OX=3702 GN=MYB14 PE=2 SV=1","K","Transcription","PREDICTED: myb-related protein Myb4 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra010009","Bra010009",2.854637,81,2.095955,60,2.413229,63,8.892517,177,14.0945,271,11.485392,222,{"v":9.55811579569702e-07,"d":"9.56E-07"},1.64367773771038,"up","[U]","Intracellular trafficking, secretion, and vesicular transport","Molecular Function: protein transporter activity (GO:0008565);; Biological Process: protein secretion (GO:0009306);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast envelope (GO:0009941);; Molecular Function: proton motive force dependent protein transmembrane transporter activity (GO:0009977);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: integral component of thylakoid membrane (GO:0031361);; Cellular Component: TAT protein transport complex (GO:0033281);; Biological Process: protein transport by the Tat complex (GO:0043953);; Biological Process: protein import into chloroplast thylakoid membrane (GO:0045038);; ","K03116|1.09365e-68|brp:103874592|K03116 sec-independent protein translocase protein TatA | (RefSeq) sec-independent protein translocase protein TATA, chloroplastic","Protein export (ko03060)","--","--","mttA/Hcf106 family","Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATA PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Brassica oleracea var. oleracea]","biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra034368","Bra034368",7.129657,245,3.268023,244,3.972112,278,13.307951,609,22.805299,575,16.759042,758,{"v":2.5591614158008e-06,"d":"2.56E-06"},1.26208895062146,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra014673","Bra014673",1.542861,173,2.115963,239,2.227826,231,1.568972,125,1.203746,92,0.984469,76,0.00375735294984698,-1.17829378868656,"down","[T]","Signal transduction mechanisms","--","K00924|0|brp:103863087|K00924 [EC:2.7.1.-] | (RefSeq) CDPK-related kinase 7-like","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Lipopolysaccharide kinase (Kdo/WaaP) family","CDPK-related kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: CDPK-related kinase 7-like [Brassica rapa]","--"]
["Bra004226","Bra004226",0.403288,37,0.73499,68,0.435387,37,1.852298,120,2.342242,146,1.640569,103,0.00955338061129755,1.26587322945053,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; ","K06949|0|brp:103831170|K06949 ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] | (RefSeq) putative ribosome biogenesis GTPase RsgA","--","--","--","RsgA GTPase;; 50S ribosome-binding GTPase","Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=rsgA PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103831170 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra022537","Bra022537",2.013829,115,1.412367,80,0.935625,52,4.952446,201,5.272726,204,5.828443,223,0.000196991348274392,1.30043014638582,"up","--","--","Biological Process: mitotic G2 phase (GO:0000085);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: protein methyltransferase activity (GO:0008276);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone methylation (GO:0016571);; Biological Process: protein deubiquitination (GO:0016579);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K15190|0|brp:103852164|K15190 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] | (RefSeq) probable RNA methyltransferase At5g51130","--","[R]","General function prediction only","Bicoid-interacting protein 3 (Bin3);; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Ribosomal protein L11 methyltransferase (PrmA)","Probable RNA methyltransferase At5g51130 OS=Arabidopsis thaliana OX=3702 GN=At5g51130 PE=2 SV=1","S","Function unknown","PREDICTED: probable RNA methyltransferase At5g51130 [Brassica rapa] ","biological process: biological phase (GO:0044848);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra039508","Bra039508",23.91873,1527,43.269352,2788,42.095467,2486,9.680524,438,5.438613,237,6.810392,298,{"v":3.42763859039007e-12,"d":"3.43E-12"},-2.81024229769981,"down","--","--","Biological Process: cytokinin biosynthetic process (GO:0009691);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103848442 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028974","Bra028974",4.834914,377,5.018024,394,5.040308,363,15.067002,830,28.494444,1510,25.894627,1381,{"v":5.08041599490974e-07,"d":"5.08E-07"},1.6321562328068,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","C2 domain","Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103856983 isoform X2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra010879","Bra010879",132.860672,16652,216.082828,28125,204.27237,24183,68.215652,5963,36.347592,3048,32.898728,2736,{"v":1.0375045284691e-09,"d":"1.04E-09"},-2.55771799217037,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: ER-nucleus signaling pathway (GO:0006984);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of salicylic acid metabolic process (GO:0010337);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: ATPase-coupled arsenite transmembrane transporter activity (GO:0015446);; Biological Process: ammonium transport (GO:0015696);; Biological Process: arsenite transport (GO:0015700);; Biological Process: basic amino acid transport (GO:0015802);; Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity (GO:0016756);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: cadmium ion binding (GO:0046870);; Biological Process: phytochelatin biosynthetic process (GO:0046938);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: phytochelatin transmembrane transporter activity (GO:0071992);; ","--","--","--","--","MAC/Perforin domain","MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana OX=3702 GN=NSL1 PE=2 SV=1","S","Function unknown","PREDICTED: MACPF domain-containing protein NSL1-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: multi-organism process (GO:0051704)"]
["Brassica_rapa_newGene_31358","--",68.868423,1127,112.837761,1864,99.043747,1500,53.411987,619,22.107861,247,34.761269,390,{"v":3.03751470409631e-05,"d":"3.04E-05"},-1.855134770261,"down","[M]","Cell wall/membrane/envelope biogenesis","--","--","--","--","--","Lecithin retinol acyltransferase;; NlpC/P60 family","--","S","Function unknown","uncharacterized protein LOC106433042 [Brassica napus] ","--"]
["Bra022576","Bra022576",27.514109,2718,11.462557,1143,13.268544,1213,9.877496,691,4.218338,284,4.309838,292,{"v":8.65841333813396e-05,"d":"8.66E-05"},-1.93062287587501,"down","[V]","Defense mechanisms","Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Biological Process: ethylene biosynthetic process (GO:0009693);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Cellular Component: membrane (GO:0016020);; Molecular Function: transmembrane transporter activity (GO:0022857);; Biological Process: response to chemical (GO:0042221);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism transport (GO:0044765);; Biological Process: defense response by callose deposition (GO:0052542);; ","K03327|0|brp:103852115|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 50-like","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 50 OS=Arabidopsis thaliana OX=3702 GN=DTX50 PE=2 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 50-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: transporter activity (GO:0005215)"]
["Bra033950","Bra033950",0.098983,7,0.169548,11,0.096781,6,1.289933,42,3.505186,129,2.19405,87,{"v":7.43765149540353e-06,"d":"7.44E-06"},3.08437456088464,"up","--","--","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: fatty acid metabolic process (GO:0006631);; Biological Process: coenzyme metabolic process (GO:0006732);; Biological Process: porphyrin-containing compound biosynthetic process (GO:0006779);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: endoplasmic reticulum organization (GO:0007029);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Biological Process: serine family amino acid metabolic process (GO:0009069);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: gravitropism (GO:0009630);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: de-etiolation (GO:0009704);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: fruit dehiscence (GO:0010047);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: response to red light (GO:0010114);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: regulation of auxin biosynthetic process (GO:0010600);; Biological Process: regulation of auxin mediated signaling pathway (GO:0010928);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: cell differentiation (GO:0030154);; Biological Process: positive regulation of anthocyanin metabolic process (GO:0031539);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: carpel development (GO:0048440);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH109 OS=Arabidopsis thaliana OX=3702 GN=BHLH109 PE=1 SV=1","K","Transcription","transcription factor bHLH109 isoform X1 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501)"]
["Bra024257","Bra024257",22.244844,3704,51.368869,8103,51.896749,7712,4.058274,469,4.399563,536,4.40952,553,{"v":3.18831493759316e-19,"d":"3.19E-19"},-3.62988700240147,"down","[P]","Inorganic ion transport and metabolism","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: inositol-1,4-bisphosphate 1-phosphatase activity (GO:0004441);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: RNA catabolic process (GO:0006401);; Biological Process: sulfur compound metabolic process (GO:0006790);; Molecular Function: 3'(2'),5'-bisphosphate nucleotidase activity (GO:0008441);; Molecular Function: inositol monophosphate 1-phosphatase activity (GO:0008934);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: miRNA catabolic process (GO:0010587);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Molecular Function: inositol bisphosphate phosphatase activity (GO:0016312);; Molecular Function: obsolete nucleotide phosphatase activity (GO:0019204);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to cation stress (GO:0043157);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: small molecule biosynthetic process (GO:0044283);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: phosphatidylinositol-mediated signaling (GO:0048015);; Biological Process: plant ovule development (GO:0048481);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: root hair elongation (GO:0048767);; Biological Process: response to freezing (GO:0050826);; Biological Process: positive regulation of unidimensional cell growth (GO:0051512);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: regulation of jasmonic acid biosynthetic process (GO:0080141);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K15422|0|brp:103873819|K15422 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase [EC:3.1.3.7 3.1.3.57] | (RefSeq) SAL2 phosphatase","Inositol phosphate metabolism (ko00562);; Sulfur metabolism (ko00920);; Phosphatidylinositol signaling system (ko04070)","[FP]","Nucleotide transport and metabolism;; Inorganic ion transport and metabolism","Inositol monophosphatase family","SAL2 phosphatase OS=Arabidopsis thaliana OX=3702 GN=SAL2 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: SAL2 phosphatase [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: growth (GO:0040007)"]
["Bra039516","Bra039516",27.575248,1139,24.314309,1029,23.868412,951,3.835718,122,0.937915,28,1.219446,47,{"v":2.93365853001876e-13,"d":"2.93E-13"},-3.83826741392568,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: anion transport (GO:0006820);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: response to chemical (GO:0042221);; Biological Process: nitrogen compound transport (GO:0071705);; ","--","--","--","--","Domain of unknown function (DUF588)","CASP-like protein 1B1 OS=Arabidopsis thaliana OX=3702 GN=At5g44550 PE=1 SV=1","S","Function unknown","PREDICTED: CASP-like protein 1B1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: response to stimulus (GO:0050896)"]
["Bra010290","Bra010290",1.134304,62,1.409469,78,1.369793,70,0,0,0,0,0,0,{"v":3.33682362350456e-11,"d":"3.34E-11"},-6.46616969536496,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: xylem development (GO:0010089);; Biological Process: response to chitin (GO:0010200);; Biological Process: xyloglucan metabolic process (GO:0010411);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Molecular Function: xyloglucan-specific endo-beta-1,4-glucanase activity (GO:0033946);; Biological Process: cell wall modification (GO:0042545);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: primary root development (GO:0080022);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0080039);; ","K08235|0|brp:103834677|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) probable xyloglucan endotransglucosylase/hydrolase protein 18","--","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana OX=3702 GN=XTH18 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 18 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra023796","Bra023796",5.495923,613,12.1415,1378,12.82701,1326,3.527585,276,3.516716,260,2.653553,205,{"v":1.18461137201941e-06,"d":"1.18E-06"},-2.18127027705122,"down","[L]","Replication, recombination and repair","Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: meiotic DNA recombinase assembly (GO:0000707);; Biological Process: DNA strand renaturation (GO:0000733);; Molecular Function: damaged DNA binding (GO:0003684);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: chromosome (GO:0005694);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: regulation of DNA replication (GO:0006275);; Biological Process: DNA methylation (GO:0006306);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Molecular Function: DNA-dependent ATPase activity (GO:0008094);; Biological Process: pollen development (GO:0009555);; Biological Process: response to ionizing radiation (GO:0010212);; Biological Process: response to gamma radiation (GO:0010332);; Biological Process: somatic cell DNA recombination (GO:0016444);; Biological Process: chromatin organization (GO:0016568);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: double-strand break repair via synthesis-dependent strand annealing (GO:0045003);; Biological Process: chiasma assembly (GO:0051026);; Biological Process: regulation of cell cycle (GO:0051726);; ","K10872|0|brp:103834269|K10872 meiotic recombination protein DMC1 | (RefSeq) meiotic recombination protein DMC1 homolog","--","[DL]","Cell cycle control, cell division, chromosome partitioning;; Replication, recombination and repair","Rad51;; recA bacterial DNA recombination protein","Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1","L","Replication, recombination and repair","BnaCnng14320D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra011873","Bra011873",0.375401,58,0.014454,4,0.087023,13,0.751416,84,1.408843,147,2.18511,233,0.0083564401350947,2.31308750597333,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to symbiotic fungus (GO:0009610);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828982 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra028935","Bra028935",36.19508,4197,35.213364,4121,30.809607,3305,30.322172,2488,19.720182,1558,20.97019,1667,{"v":2.80078908540136e-05,"d":"2.80E-05"},-1.06343800166401,"down","--","--","Biological Process: response to superoxide (GO:0000303);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: cellular process (GO:0009987);; Biological Process: response to chitin (GO:0010200);; Molecular Function: ligase activity (GO:0016874);; Biological Process: single-organism process (GO:0044699);; ","K11982|0|brp:103856934|K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RING1-like","--","[O]","Posttranslational modification, protein turnover, chaperones","FBD;; Ring finger domain;; zinc-ribbon;; Zinc finger, C3HC4 type (RING finger);; RING-like zinc finger;; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","BnaA03g10920D [Brassica napus]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra036718","Bra036718",88.802503,8498,53.664902,5187,49.133789,4335,47.964441,3179,40.532171,2582,42.299794,2775,{"v":1.40138860028735e-05,"d":"1.40E-05"},-1.08564568283417,"down","--","--","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: vacuole (GO:0005773);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: cell communication (GO:0007154);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; Molecular Function: cation binding (GO:0043169);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","Glycosyl hydrolases family 17;; X8 domain","Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana OX=3702 GN=At1g64760 PE=1 SV=2","S","Function unknown","PREDICTED: glucan endo-1,3-beta-glucosidase 8 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra010648","Bra010648",6.551296,436,1.405491,88,1.284388,71,16.730512,779,26.057612,1135,28.828541,1251,0.000493559424059487,2.28410417099666,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103835087 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra012108","Bra012108",2.524331,251,3.001201,301,2.449249,225,6.242011,438,8.742723,591,9.778187,665,0.00057781209699575,1.05628833568473,"up","--","--","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: vernalization response (GO:0010048);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103829560 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra029222","Bra029222",82.123367,9476,103.369346,12075,106.131318,11199,39.42161,3271,22.712563,2283,23.216042,2253,{"v":8.92237637760489e-15,"d":"8.92E-15"},-2.11229766755259,"down","[T]","Signal transduction mechanisms","Cellular Component: mitochondrion (GO:0005739);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: adenyl nucleotide binding (GO:0030554);; Biological Process: intracellular signal transduction (GO:0035556);; ","--","--","--","--","CBS domain;; PB1 domain","CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB1 PE=1 SV=1","S","Function unknown","PREDICTED: CBS domain-containing protein CBSCBSPB1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra007327","Bra007327",1.113997,190,0.664427,115,0.686762,109,2.249899,271,2.697035,313,2.579498,301,0.000262321980155413,1.05642577851775,"up","--","--","Biological Process: mitochondrial RNA processing (GO:0000963);; Molecular Function: endonuclease activity (GO:0004519);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: phloem or xylem histogenesis (GO:0010087);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);; Biological Process: cytidine to uridine editing (GO:0016554);; Biological Process: chloroplast RNA processing (GO:0031425);; Biological Process: leaf development (GO:0048366);; Biological Process: mitochondrial mRNA modification (GO:0080156);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; DYW family of nucleic acid deaminases;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g57430, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra038608","Bra038608",22.563978,854,60.141487,2297,54.972652,1924,11.690074,313,12.857248,332,17.639133,458,{"v":4.88260954625639e-06,"d":"4.88E-06"},-2.20528988106856,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to chitin (GO:0010200);; ","--","--","--","--","PB1 domain","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873733 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Brassica_rapa_newGene_11445","--",1.715606,168,1.530059,152,1.031974,111,0.534331,44,0.671563,54,0.814781,57,{"v":1.11526639330179e-05,"d":"1.12E-05"},-1.48285815969066,"down","--","--","--","--","--","--","--","--","--","T","Signal transduction mechanisms","BnaC05g48170D [Brassica napus]","--"]
["Bra033224","Bra033224",3.76898,294,2.260052,180,1.788542,131,5.999661,333,9.554215,509,8.132169,437,0.00518958063118189,1.04577136339101,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Biological Process: single-organism process (GO:0044699);; ","--","--","[R]","General function prediction only","PPR repeat;; PPR repeat family;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra021530","Bra021530",22.711556,3716,25.169395,4097,21.928781,3292,15.387827,1758,16.906503,1887,16.933593,1902,{"v":1.30595027795405e-09,"d":"1.31E-09"},-1.04872446936178,"down","--","--","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Molecular Function: triglyceride lipase activity (GO:0004806);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: lipid catabolic process (GO:0016042);; ","--","--","[IOT]","Lipid transport and metabolism;; Posttranslational modification, protein turnover, chaperones;; Signal transduction mechanisms","Lipase (class 3);; Lipase 3 N-terminal region","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842317 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699)"]
["Bra009293","Bra009293",12.259411,1109,15.802176,1442,8.725764,730,8.27845,530,8.28257,510,7.530413,467,0.000230822003899277,-1.14793470887214,"down","[T]","Signal transduction mechanisms","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: sucrose biosynthetic process (GO:0005986);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to extracellular stimulus (GO:0009991);; Biological Process: stomatal movement (GO:0010118);; Biological Process: raffinose family oligosaccharide biosynthetic process (GO:0010325);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: mannitol biosynthetic process (GO:0019593);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: galactinol-sucrose galactosyltransferase activity (GO:0047274);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; NAF domain;; Kinase-like","CBL-interacting serine/threonine-protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CIPK2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: CBL-interacting serine/threonine-protein kinase 2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra022803","Bra022803",590.922766,58012,776.687105,76945,734.834225,66735,233.049786,16186,130.449668,8723,128.367344,8637,{"v":3.13315698930579e-14,"d":"3.13E-14"},-2.60544269218556,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin metabolic process (GO:0009808);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Molecular Function: trans-cinnamate 4-monooxygenase activity (GO:0016710);; Molecular Function: heme binding (GO:0020037);; Biological Process: growth (GO:0040007);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity (GO:0072533);; Biological Process: response to karrikin (GO:0080167);; ","K00487|0|brp:103857323|K00487 trans-cinnamate 4-monooxygenase [EC:1.14.13.11] | (RefSeq) C4H-BR-2; trans-cinnamate 4-monooxygenase-like","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Phenylalanine metabolism (ko00360);; Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana OX=3702 GN=CYP73A5 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: trans-cinnamate 4-monooxygenase-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007)"]
["Bra008651","Bra008651",0.969307,63,0.375384,25,0.732042,44,3.296296,151,2.559022,113,2.522475,112,0.0027381178951297,1.42293121306041,"up","[I]","Lipid transport and metabolism","Molecular Function: binding (GO:0005488);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: defense response (GO:0006952);; Biological Process: metabolic process (GO:0008152);; Biological Process: cell death (GO:0008219);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cell development (GO:0048468);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: multi-organism process (GO:0051704);; Molecular Function: carboxylic ester hydrolase activity (GO:0052689);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[V]","Defense mechanisms","alpha/beta hydrolase fold;; Carboxylesterase family;; Steryl acetyl hydrolase;; Chlorophyllase enzyme","Probable carboxylesterase 17 OS=Arabidopsis thaliana OX=3702 GN=CXE17 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: probable carboxylesterase 17 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra038589","Bra038589",22.230873,1721,17.112389,1339,15.200045,1088,9.831617,563,5.064563,271,5.449974,301,{"v":1.44267487357798e-07,"d":"1.44E-07"},-1.86680135268825,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K02925|0|brp:103849653|K02925 large subunit ribosomal protein L3e | (RefSeq) 60S ribosomal protein L3-2-like","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein L3","60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4","J","Translation, ribosomal structure and biogenesis","PREDICTED: 60S ribosomal protein L3-2-like [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: macromolecular complex (GO:0032991)"]
["Bra038645","Bra038645",26.783899,2219,31.217604,2610,29.863138,2289,3.069513,180,1.085807,62,1.251937,72,{"v":3.71150429405553e-23,"d":"3.71E-23"},-4.40609734834899,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: cutin biosynthetic process (GO:0010143);; Biological Process: response to nitrate (GO:0010167);; Biological Process: suberin biosynthetic process (GO:0010345);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: O-acetyltransferase activity (GO:0016413);; Biological Process: ferulate metabolic process (GO:0033494);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734);; Molecular Function: O-hydroxycinnamoyltransferase activity (GO:0050737);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: cell wall pectin biosynthetic process (GO:0052325);; Molecular Function: caffeoyl-CoA: alcohol caffeoyl transferase activity (GO:0090430);; Biological Process: alkyl caffeate ester biosynthetic process (GO:0090431);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; ","K15400|0|brp:103873767|K15400 omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188] | (RefSeq) omega-hydroxypalmitate O-feruloyl transferase","Cutin, suberine and wax biosynthesis (ko00073)","--","--","Transferase family","Fatty alcohol:caffeoyl-CoA acyltransferase OS=Arabidopsis thaliana OX=3702 GN=FACT PE=2 SV=1","S","Function unknown","PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra014693","Bra014693",11.23373,734,5.493965,374,4.753221,247,0.450684,20,0.276057,12,0,0,{"v":3.95864902746362e-08,"d":"3.96E-08"},-4.6282430060593,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: nucleolus (GO:0005730);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ion transport (GO:0006811);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","--","--","--","--","WRKY DNA -binding domain","WRKY transcription factor 55 OS=Arabidopsis thaliana OX=3702 GN=WRKY55 PE=2 SV=1","K","Transcription","PREDICTED: WRKY transcription factor 55-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra012149","Bra012149",191.184311,11017,209.134781,12161,138.055359,7359,92.898903,3787,53.63483,2105,48.20113,1904,{"v":1.74274989899339e-08,"d":"1.74E-08"},-1.97367119379414,"down","--","--","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: cell fate specification (GO:0001708);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: transcription coactivator activity (GO:0003713);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: pollen tube guidance (GO:0010183);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to UV-B (GO:0010224);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: regulation of synergid differentiation (GO:0045697);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of salicylic acid mediated signaling pathway (GO:2000031);; Biological Process: regulation of secondary cell wall biogenesis (GO:2000652);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103829517|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB44","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor MYB44 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: protein binding transcription factor activity (GO:0000988);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: locomotion (GO:0040011);; biological process: metabolic process (GO:0008152);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501)"]
["Bra022205","Bra022205",12.011081,2748,21.290906,3631,12.126519,2566,4.332386,702,3.831419,597,3.169957,497,{"v":2.16057513792277e-19,"d":"2.16E-19"},-2.3473970715807,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Cellular Component: protein serine/threonine phosphatase complex (GO:0008287);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to chitin (GO:0010200);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: interspecies interaction between organisms (GO:0044419);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of defense response to virus (GO:0050688);; Biological Process: regulation of transcription from RNA polymerase II promoter in response to salt stress (GO:0061416);; ","K14803|1.28713e-88|bna:106452091|K14803 protein phosphatase PTC2/3 [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 43","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana OX=3702 GN=At3g17250 PE=2 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 43 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)"]
["Bra008950","Bra008950",2.492213,135,2.303663,126,2.125057,107,1.116377,43,1.105434,41,0.965704,36,{"v":5.88060701015833e-07,"d":"5.88E-07"},-1.63280398017423,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","SWIM zinc finger","--","S","Function unknown","PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra036820","Bra036820",1.642617,68,1.433441,54,0.93168,34,4.586723,125,7.014901,179,7.015929,179,{"v":9.65939870318812e-05,"d":"9.66E-05"},1.56365431135728,"up","--","--","--","--","--","--","--","Myb/SANT-like DNA-binding domain","L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1","S","Function unknown","PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Brassica rapa]","--"]
["Bra022957","Bra022957",42.627541,3242,27.054889,2104,19.663661,1353,87.947459,4688,244.437591,12712,225.509729,11711,{"v":1.24028094074001e-05,"d":"1.24E-05"},2.03736030361161,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: positive regulation of vernalization response (GO:0010220);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","Dormancy/auxin associated protein","Protein FRIGIDA-ESSENTIAL 1 OS=Arabidopsis thaliana OX=3702 GN=FES1 PE=1 SV=2","S","Function unknown","PREDICTED: protein FRIGIDA-ESSENTIAL 1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra003956","Bra003956",10.204069,323,9.015736,288,4.811979,132,26.316625,530,22.328934,482,28.219742,596,0.00445758823672612,1.07042411416015,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)"]
["Bra005476","Bra005476",2.941559,108,2.770951,96,1.228207,50,7.039828,200,6.452884,198,8.032541,185,0.00180486304639469,1.14764649363742,"up","[O]","Posttranslational modification, protein turnover, chaperones","--","--","--","[O]","Posttranslational modification, protein turnover, chaperones","DnaJ domain","DNAJ protein JJJ1 homolog OS=Arabidopsis thaliana OX=3702 GN=JJJ1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103867514 [Brassica rapa] ","--"]
["Bra037421","Bra037421",19.934366,1091,9.449698,525,11.283072,572,7.879938,314,4.722152,194,5.112602,194,{"v":1.469263871571e-05,"d":"1.47E-05"},-1.61986932287136,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Biological Process: single-organism process (GO:0044699);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","[K]","Transcription","GATA zinc finger","GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1","K","Transcription","PREDICTED: GATA transcription factor 16-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra010949","Bra010949",0.835226,90,0.780887,85,1.253858,97,2.176877,162,5.677812,310,4.637594,272,0.000963032331899651,1.35730236234932,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: leaf shaping (GO:0010358);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: anther development (GO:0048653);; ","--","--","--","--","SBP domain","Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=SPL10 PE=2 SV=2","K","Transcription","PREDICTED: squamosa promoter-binding-like protein 10 isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414)"]
["Bra032988","Bra032988",43.754617,3795,68.536939,5939,75.302159,6083,29.272469,1799,9.7844,576,11.531714,680,{"v":5.88889946735653e-06,"d":"5.89E-06"},-2.35036504116144,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: floral organ development (GO:0048437);; ","--","--","--","--","--","Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1","--","--","PREDICTED: uncharacterized protein At3g27210-like isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra017799","Bra017799",0.982524,75,1.655072,117,2.074651,131,1.058697,37,0.353324,19,0.073838,5,0.00367370893719173,-2.23946869491708,"down","[R]","General function prediction only","Molecular Function: phospholipase activity (GO:0004620);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lateral root formation (GO:0010311);; Molecular Function: nutrient reservoir activity (GO:0045735);; ","--","--","[I]","Lipid transport and metabolism","Patatin-like phospholipase","Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2","S","Function unknown","PREDICTED: patatin-like protein 3 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: nutrient reservoir activity (GO:0045735)"]
["Bra027098","Bra027098",1.295704,188,1.534459,255,1.570664,235,0.045155,6,0.042934,6,0,0,{"v":8.59280001448169e-17,"d":"8.59E-17"},-5.39624103956438,"down","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Biological Process: response to singlet oxygen (GO:0000304);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Molecular Function: terpene synthase activity (GO:0010333);; Biological Process: diterpenoid biosynthetic process (GO:0016102);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: (E,E)-geranyllinalool synthase activity (GO:0080013);; Biological Process: response to herbivore (GO:0080027);; ","K17982|0|brp:103838542|K17982 geranyllinalool synthase [EC:4.2.3.144] | (RefSeq) (E,E)-geranyllinalool synthase","Diterpenoid biosynthesis (ko00904)","--","--","Terpene synthase family, metal binding domain;; Terpene synthase, N-terminal domain","(E,E)-geranyllinalool synthase OS=Arabidopsis thaliana OX=3702 GN=GES PE=1 SV=1","S","Function unknown","PREDICTED: (E,E)-geranyllinalool synthase [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra015938","Bra015938",11.784886,789,7.102595,480,8.214582,509,1.507343,72,1.12687,52,2.258533,104,{"v":3.57149314980926e-16,"d":"3.57E-16"},-2.92361849502276,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity (GO:0080066);; Molecular Function: 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity (GO:0080067);; Molecular Function: 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity (GO:0080068);; Molecular Function: 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (GO:0080069);; Molecular Function: 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity (GO:0080070);; Molecular Function: indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity (GO:0080071);; ","--","--","[R]","General function prediction only","Sulfotransferase domain;; Sulfotransferase family","Cytosolic sulfotransferase 18 OS=Arabidopsis thaliana OX=3702 GN=SOT18 PE=1 SV=1","S","Function unknown","PREDICTED: cytosolic sulfotransferase 18 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824)"]
["Bra040600","Bra040600",48.24683,768,53.54641,860,49.989231,736,424.572876,4779,492.062988,5331,536.362183,5848,{"v":6.21731215558519e-44,"d":"6.22E-44"},2.68107342943214,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: intracellular (GO:0005622);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: mitotic cell cycle (GO:0007067);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","--","--","--","--","BnaA05g33350D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra002021","Bra002021",49.0066,4196,44.083785,3963,45.769386,3718,25.674542,1480,12.255719,699,12.460426,698,{"v":1.1946256277054e-08,"d":"1.19E-08"},-2.05644501914394,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: protein binding (GO:0005515);; Molecular Function: chitin binding (GO:0008061);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","--","LysM domain","LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana OX=3702 GN=LYM2 PE=1 SV=1","S","Function unknown","PREDICTED: lysM domain-containing GPI-anchored protein 2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)"]
["Bra010307","Bra010307",25.747506,2458,17.554868,2686,17.954871,2582,10.87736,745,5.208953,438,7.594116,535,{"v":1.55564089388013e-15,"d":"1.56E-15"},-2.20405904559813,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Molecular Function: acetylglucosaminyltransferase activity (GO:0008375);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Core-2/I-Branching enzyme","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103834693 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020)"]
["Bra015599","Bra015599",94.333331,9421,103.134026,10354,101.067181,9345,87.260162,6077,49.846526,3394,54.185281,3726,{"v":8.15053038617017e-05,"d":"8.15E-05"},-1.18735767368874,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: glucokinase activity (GO:0004340);; Molecular Function: protein binding (GO:0005515);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Molecular Function: fructokinase activity (GO:0008865);; Biological Process: response to cold (GO:0009409);; Biological Process: response to salt stress (GO:0009651);; Biological Process: hexokinase-dependent signaling (GO:0009747);; Biological Process: programmed cell death (GO:0012501);; Biological Process: hexose catabolic process (GO:0019320);; Cellular Component: integral component of mitochondrial outer membrane (GO:0031307);; Molecular Function: ion binding (GO:0043167);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: root hair cell development (GO:0080147);; ","K00844|0|brp:103843922|K00844 hexokinase [EC:2.7.1.1] | (RefSeq) hexokinase-like 1 protein","Glycolysis / Gluconeogenesis (ko00010);; Fructose and mannose metabolism (ko00051);; Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","Hexokinase;; Hexokinase","Hexokinase-like 1 protein OS=Arabidopsis thaliana OX=3702 GN=At1g47840 PE=2 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: hexokinase-like 1 protein [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502)"]
["Bra039511","Bra039511",95.913795,3406,158.465195,5678,159.99852,5255,58.246918,1463,36.330441,879,34.385735,837,{"v":9.36381665214134e-09,"d":"9.36E-09"},-2.20216479876478,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: trichome branching (GO:0010091);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: regulation of nitric oxide metabolic process (GO:0080164);; ","K13448|2.93172e-114|brp:103848449|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML43","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain;; EF-hand domain pair;; EF hand;; EF-hand domain pair;; Cytoskeletal-regulatory complex EF hand;; Caleosin related protein;; Secreted protein acidic and rich in cysteine Ca binding region","Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML43 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra001123","Bra001123",139.884232,5835,77.547394,3265,53.507778,2065,166.311157,4908,1229.300781,34920,1102.464966,31512,0.000247077478733617,2.47169839535778,"up","--","--","Cellular Component: plant-type vacuole (GO:0000325);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: ribonuclease activity (GO:0004540);; Molecular Function: chitinase activity (GO:0004568);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: chitin catabolic process (GO:0006032);; Molecular Function: chitin binding (GO:0008061);; Molecular Function: endochitinase activity (GO:0008843);; Biological Process: response to virus (GO:0009615);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: beta-N-acetylglucosaminidase activity (GO:0016231);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Biological Process: killing of cells of other organism (GO:0031640);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: response to herbivore (GO:0080027);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; ","--","--","[R]","General function prediction only","Barwin family;; Chitin recognition protein","Hevein-like preproprotein OS=Arabidopsis thaliana OX=3702 GN=HEL PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: hevein-like preproprotein [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cell killing (GO:0001906);; biological process: biological regulation (GO:0065007)"]
["Bra012597","Bra012597",7.930484,336,18.479034,789,24.119009,944,7.604019,228,5.959785,172,5.484107,159,0.000242505068305052,-1.9070376654663,"down","[R]","General function prediction only","Biological Process: cytokinesis (GO:0000910);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: nucleocytoplasmic transport (GO:0006913);; Biological Process: membrane fusion (GO:0006944);; Biological Process: small GTPase mediated signal transduction (GO:0007264);; Cellular Component: cell plate (GO:0009504);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to auxin (GO:0009733);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: vesicle-mediated transport (GO:0016192);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Cellular Component: early endosome membrane (GO:0031901);; Cellular Component: trans-Golgi network membrane (GO:0032588);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: photoperiodism, flowering (GO:0048573);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Ras family;; Ras of Complex, Roc, domain of DAPkinase;; ADP-ribosylation factor family;; 50S ribosome-binding GTPase","Ras-related protein RABA1e OS=Arabidopsis thaliana OX=3702 GN=RABA1E PE=2 SV=1","S","Function unknown","PREDICTED: ras-related protein RABA1e [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra034123","Bra034123",2.894779,72,3.699588,92,3.978817,91,0.948149,17,0.953549,16,0.851218,15,{"v":5.65172863167145e-07,"d":"5.65E-07"},-2.38075183570628,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: trichome differentiation (GO:0010026);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: positive regulation of DNA endoreduplication (GO:0032877);; Biological Process: negative regulation of mitotic nuclear division (GO:0045839);; Biological Process: sepal giant cell development (GO:0090393);; ","--","--","--","--","--","Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 GN=SMR1 PE=1 SV=1","K","Transcription","PREDICTED: cyclin-dependent protein kinase inhibitor SMR1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007)"]
["Bra025654","Bra025654",22.867157,839,50.060795,1853,59.139824,2007,22.086491,573,23.453197,586,31.148449,783,0.00533066813710621,-1.32458623153099,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to hormone (GO:0009725);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: trichome branching (GO:0010091);; Biological Process: membrane organization (GO:0016044);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: regulation of programmed cell death (GO:0043067);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: regulation of innate immune response (GO:0045088);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: detection of stimulus (GO:0051606);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[T]","Signal transduction mechanisms","EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain pair","Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=1 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML45 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152)"]
["Bra000699","Bra000699",69.309877,2258,93.658081,3273,91.77298,3012,31.29527,774,66.362553,1585,62.544628,1540,0.0048455343038746,-1.16817300206317,"down","[C]","Energy production and conversion","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: mitochondrial intermembrane space (GO:0005758);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: cell proliferation (GO:0008283);; Molecular Function: electron carrier activity (GO:0009055);; Molecular Function: heme binding (GO:0020037);; Biological Process: electron transport chain (GO:0022900);; Cellular Component: respiratory chain (GO:0070469);; ","K08738|9.42256e-79|eus:EUTSA_v10029081mg|K08738 cytochrome c | (RefSeq) hypothetical protein","Sulfur metabolism (ko00920)","[C]","Energy production and conversion","Cytochrome c;; Cytochrome C oxidase, cbb3-type, subunit III","Cytochrome c-2 OS=Arabidopsis thaliana OX=3702 GN=CYTC-2 PE=1 SV=1","C","Energy production and conversion","cytochrome c-2 [Eutrema salsugineum] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: electron carrier activity (GO:0009055);; biological process: cellular process (GO:0009987);; cellular component: membrane part (GO:0044425)"]
["Brassica_rapa_newGene_3562","--",0.77368,66,1.89831,163,1.19246,94,0.452456,28,0.248711,15,0.181507,11,0.000156079325203861,-2.46520255698359,"down","--","--","--","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC108871365 [Brassica rapa]","--"]
["Bra017125","Bra017125",79.807175,3175,58.595303,2352,53.936913,1985,24.706408,696,23.77335,644,22.062006,602,{"v":5.00506953007506e-30,"d":"5.01E-30"},-1.97294377642225,"down","--","--","--","K14496|9.95969e-136|brp:103865662|K14496 abscisic acid receptor PYR/PYL family | (RefSeq) abscisic acid receptor PYL4-like","Plant hormone signal transduction (ko04075)","--","--","Polyketide cyclase / dehydrase and lipid transport;; Pathogenesis-related protein Bet v I family;; Polyketide cyclase / dehydrase and lipid transport","Abscisic acid receptor PYL4 OS=Arabidopsis thaliana OX=3702 GN=PYL4 PE=1 SV=1","S","Function unknown","PREDICTED: abscisic acid receptor PYL4-like [Brassica rapa] ","--"]
["Bra025874","Bra025874",102.557078,7451,225.303154,16518,227.129621,15272,78.120634,4048,91.799722,4563,93.094769,4649,0.000100358285285109,-1.61105501623049,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: O-methyltransferase activity (GO:0008171);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: luteolin O-methyltransferase activity (GO:0030744);; Molecular Function: quercetin 3-O-methyltransferase activity (GO:0030755);; Biological Process: methylation (GO:0032259);; Molecular Function: myricetin 3'-O-methyltransferase activity (GO:0033799);; Biological Process: indole glucosinolate metabolic process (GO:0042343);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: caffeate O-methyltransferase activity (GO:0047763);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","--","--","[R]","General function prediction only","O-methyltransferase;; Dimerisation domain","Indole glucosinolate O-methyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=IGMT4 PE=1 SV=1","S","Function unknown","PREDICTED: indole glucosinolate O-methyltransferase 4-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra037545","Bra037545",4.556201,330,1.448556,106,11.29875,757,1.860102,96,0.615098,31,0.029637,2,0.00851184900143523,-2.66404612136582,"down","[R]","General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: transport (GO:0006810);; Cellular Component: chloroplast (GO:0009507);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: embryo development (GO:0009790);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: membrane (GO:0016020);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: myosin heavy chain kinase activity (GO:0016905);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: protein complex (GO:0043234);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: innate immune response (GO:0045087);; Biological Process: seed development (GO:0048316);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ development (GO:0048513);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","--","--","[R]","General function prediction only","WD domain, G-beta repeat;; PQQ-like domain;; Nucleoporin Nup120/160","Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1","S","Function unknown","BnaA01g26340D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra022702","Bra022702",0.006466,1,0,0,0,0,1.014082,97,1.462942,135,2.280552,212,{"v":6.77971904955057e-15,"d":"6.78E-15"},6.77839952250407,"up","[T]","Signal transduction mechanisms","Molecular Function: intracellular cAMP activated cation channel activity (GO:0005222);; Molecular Function: inward rectifier potassium channel activity (GO:0005242);; Molecular Function: cation channel activity (GO:0005261);; Molecular Function: calcium channel activity (GO:0005262);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: potassium ion transport (GO:0006813);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: nitric oxide mediated signal transduction (GO:0007263);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: cyclic nucleotide binding (GO:0030551);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: pollen tube development (GO:0048868);; Biological Process: response to other organism (GO:0051707);; Biological Process: divalent metal ion transport (GO:0070838);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[PT]","Inorganic ion transport and metabolism;; Signal transduction mechanisms","Ion transport protein;; Cyclic nucleotide-binding domain","Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana OX=3702 GN=CNGC4 PE=2 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: cyclic nucleotide-gated ion channel 4 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra024566","Bra024566",35.895144,1295,80.517323,2898,77.906887,2575,40.081391,1050,24.852315,597,31.399024,765,0.000835294237484565,-1.53052930775343,"down","--","--","--","--","--","[R]","General function prediction only","--","--","S","Function unknown","uncharacterized protein At4g22758 [Brassica napus] ","--"]
["Bra025481","Bra025481",30.740644,2428,62.578361,4947,43.101205,3162,36.074276,1996,33.019761,1755,31.186959,1674,0.00732088671415362,-1.01108787046098,"down","[R]","General function prediction only","Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: glyoxalase III activity (GO:0019172);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; ","K18881|0|brp:103864103|K18881 D-lactate dehydratase [EC:4.2.1.130] | (RefSeq) DJ-1 protein homolog E","Pyruvate metabolism (ko00620)","[RV]","General function prediction only;; Defense mechanisms","DJ-1/PfpI family","DJ-1 protein homolog E OS=Arabidopsis thaliana OX=3702 GN=DJ1E PE=1 SV=1","S","Function unknown","PREDICTED: DJ-1 protein homolog E [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824)"]
["Bra021940","Bra021940",10.97435,1365,13.447762,1687,12.879664,1485,5.055872,454,6.121418,517,5.963303,520,{"v":1.76081771405693e-12,"d":"1.76E-12"},-1.65235778802401,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: Golgi transport complex (GO:0017119);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: cytoplasmic vesicle (GO:0031410);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; ","--","--","--","--","PA domain","Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana OX=3702 GN=VSR5 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: vacuolar-sorting receptor 5 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: macromolecular complex (GO:0032991)"]
["Bra023940","Bra023940",62.954681,2602,38.833565,1620,92.172188,3524,29.616158,866,24.483986,690,19.778456,561,{"v":1.77302714564617e-06,"d":"1.77E-06"},-1.89441765695387,"down","--","--","Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: protein binding (GO:0005515);; Biological Process: signal transduction (GO:0007165);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: positive regulation of cell death (GO:0010942);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","--","--","Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: protein NDR1-like [Brassica rapa]","molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)"]
["Bra016280","Bra016280",0,0,0,0,0,0,1.208454,71,1.922083,108,2.22635,126,{"v":9.79633815567203e-13,"d":"9.80E-13"},6.82111105080309,"up","--","--","--","--","--","[R]","General function prediction only","C2H2-type zinc finger;; C2H2-type zinc finger;; Zinc-finger double-stranded RNA-binding","Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger protein ZAT9-like [Brassica rapa] ","--"]
["Bra025920","Bra025920",15.170287,4159,18.591939,5147,19.970135,5073,9.737314,1889,9.779528,1830,9.967645,1878,{"v":9.80609110208417e-10,"d":"9.81E-10"},-1.41781472239745,"down","[S]","Function unknown","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332);; Molecular Function: phosphogluconate dehydrogenase (decarboxylating) activity (GO:0004616);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: glycolytic process (GO:0006096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: valine metabolic process (GO:0006573);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: 3-hydroxyisobutyrate dehydrogenase activity (GO:0008442);; Biological Process: cellular process (GO:0009987);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Molecular Function: coenzyme binding (GO:0050662);; ","--","--","[R]","General function prediction only","Fructose-bisphosphate aldolase class-II;; Putative sugar-binding N-terminal domain;; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase;; NAD binding domain of 6-phosphogluconate dehydrogenase;; Putative nucleotide-binding of sugar-metabolising enzyme","Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g20930 PE=2 SV=3","S","Function unknown","PREDICTED: uncharacterized protein LOC103872590 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)"]
["Bra019763","Bra019763",6.335163,150,4.906898,123,3.31603,77,18.662537,320,27.5931,462,22.298956,370,{"v":5.41279644065775e-07,"d":"5.41E-07"},1.66260174304608,"up","--","--","--","K10845|7.55416e-45|brp:103872007|K10845 TFIIH basal transcription factor complex TTD-A subunit | (RefSeq) RNA polymerase II transcription factor B subunit 5","Basal transcription factors (ko03022);; Nucleotide excision repair (ko03420)","[S]","Function unknown","Transcription factor TFIIH complex subunit Tfb5","General transcription and DNA repair factor IIH subunit TFB5 OS=Arabidopsis thaliana OX=3702 GN=TFB5 PE=3 SV=1","K","Transcription","PREDICTED: RNA polymerase II transcription factor B subunit 5 [Brassica rapa] ","--"]
["Bra000818","Bra000818",12.168463,1107,35.705138,3141,35.443471,2967,4.913156,395,9.027989,535,7.864838,479,{"v":2.03400811549149e-06,"d":"2.03E-06"},-2.35351537061111,"down","[P]","Inorganic ion transport and metabolism","Cellular Component: nucleus (GO:0005634);; Molecular Function: hydrolase activity (GO:0016787);; ","K06167|0|brp:103858690|K06167 phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] | (RefSeq) putative hydrolase C777.06c","--","--","--","Beta-lactamase superfamily domain","--","S","Function unknown","PREDICTED: putative hydrolase C777.06c [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Brassica_rapa_newGene_13905","--",3.422111,370,2.560429,279,1.953539,196,8.520864,651,12.687012,933,13.251797,981,{"v":4.38051780940051e-07,"d":"4.38E-07"},1.55458843934881,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: protein ubiquitination (GO:0016567);; ","--","--","--","--","RING-type zinc-finger","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103875090 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987)"]
["Bra000141","Bra000141",35.633653,4076,82.196754,9436,79.720057,8451,31.951559,2613,15.07959,1219,12.474865,1004,{"v":3.37866110716732e-05,"d":"3.38E-05"},-2.17724420817729,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana OX=3702 GN=BIK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase BIK1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra011152","Bra011152",13.753062,1383,22.896046,2230,26.354937,2382,1.816003,152,0.514251,51,1.90516,77,{"v":7.86268170207611e-19,"d":"7.86E-19"},-4.31764140245758,"down","--","--","Biological Process: cell fate specification (GO:0001708);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: defense response (GO:0006952);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: flower development (GO:0009908);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: stomatal lineage progression (GO:0010440);; Biological Process: histone modification (GO:0016570);; Molecular Function: bHLH transcription factor binding (GO:0043425);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: seed development (GO:0048316);; Biological Process: response to freezing (GO:0050826);; Biological Process: localization (GO:0051179);; Biological Process: protein modification by small protein removal (GO:0070646);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor bHLH27-like isoform X2 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179)"]
["Bra012541","Bra012541",9.26471,2576,13.235277,3645,12.577417,3276,5.006784,959,2.166266,428,2.689552,478,{"v":6.75382245083211e-09,"d":"6.75E-09"},-2.35738183115116,"down","[K]","Transcription","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism transport (GO:0044765);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; AAA domain","Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1","S","Function unknown","PREDICTED: disease resistance protein LAZ5-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra005280","Bra005280",2.913528,509,1.707326,301,2.047858,336,6.630459,821,9.350127,1115,10.708801,1281,{"v":1.53634646986253e-06,"d":"1.54E-06"},1.43912022358868,"up","[U]","Intracellular trafficking, secretion, and vesicular transport","Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: RNA processing (GO:0006396);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: regulation of cell size (GO:0008361);; Cellular Component: plastid (GO:0009536);; Biological Process: phototropism (GO:0009638);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: determination of bilateral symmetry (GO:0009855);; Molecular Function: blue light photoreceptor activity (GO:0009882);; Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);; Biological Process: chloroplast avoidance movement (GO:0009903);; Biological Process: chloroplast accumulation movement (GO:0009904);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: positive gravitropism (GO:0009958);; Cellular Component: cell surface (GO:0009986);; Biological Process: meristem initiation (GO:0010014);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of proton transport (GO:0010155);; Molecular Function: FMN binding (GO:0010181);; Biological Process: negative regulation of anion channel activity by blue light (GO:0010362);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: RNA interference (GO:0016246);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Molecular Function: identical protein binding (GO:0042802);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: stamen development (GO:0048443);; Biological Process: root hair initiation (GO:0048766);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cotyledon development (GO:0048825);; Biological Process: response to karrikin (GO:0080167);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[R]","General function prediction only","Protein kinase domain;; Protein tyrosine kinase","Serine/threonine-protein kinase KIPK2 OS=Arabidopsis thaliana OX=3702 GN=KIPK2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase KIPK [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; cellular component: organelle part (GO:0044422);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra038819","Bra038819",3.168525,192,6.281684,404,4.83208,294,0.186998,10,0,0,0,0,{"v":9.42474994895623e-08,"d":"9.42E-08"},-5.1633148184124,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: xylem development (GO:0010089);; Biological Process: response to chitin (GO:0010200);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Molecular Function: xyloglucan-specific endo-beta-1,4-glucanase activity (GO:0033946);; Biological Process: cell wall modification (GO:0042545);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: primary root development (GO:0080022);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0080039);; ","K08235|6.13546e-146|brp:103828367|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) probable xyloglucan endotransglucosylase/hydrolase protein 21","--","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana OX=3702 GN=XTH21 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 21 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra004912","Bra004912",36.213932,3248,89.160632,7933,75.151676,6050,27.626201,1637,34.883178,1983,32.512354,1827,{"v":6.46993513224556e-05,"d":"6.47E-05"},-1.69709319742758,"down","[EM]","Amino acid transport and metabolism;; Cell wall/membrane/envelope biogenesis","Biological Process: ubiquinone biosynthetic process (GO:0006744);; Molecular Function: 4-hydroxy-tetrahydrodipicolinate synthase (GO:0008840);; Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089);; Cellular Component: chloroplast (GO:0009507);; Biological Process: diaminopimelate biosynthetic process (GO:0019877);; ","K01714|0|brp:103866894|K01714 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] | (RefSeq) 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic-like","Monobactam biosynthesis (ko00261);; Lysine biosynthesis (ko00300);; Biosynthesis of amino acids (ko01230)","--","--","Dihydrodipicolinate synthetase family","4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHDPS2 PE=1 SV=2","E","Amino acid transport and metabolism","PREDICTED: 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra032109","Bra032109",0.905575,88,2.420132,237,1.80594,162,9.742745,670,23.768041,1570,21.931118,1459,{"v":4.91064336109375e-07,"d":"4.91E-07"},2.69787576657654,"up","--","--","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; Cellular Component: lysosome (GO:0005764);; Biological Process: proteolysis (GO:0006508);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; ","K01285|0|brp:103864533|K01285 lysosomal Pro-X carboxypeptidase [EC:3.4.16.2] | (RefSeq) lysosomal Pro-X carboxypeptidase","--","[OR]","Posttranslational modification, protein turnover, chaperones;; General function prediction only","Serine carboxypeptidase S28","Probable serine protease EDA2 OS=Arabidopsis thaliana OX=3702 GN=EDA2 PE=2 SV=2","S","Function unknown","PREDICTED: lysosomal Pro-X carboxypeptidase [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra026058","Bra026058",47.616115,5054,33.871155,3663,32.999926,3241,0.242315,24,0,0,0.190597,15,{"v":1.02291033145012e-24,"d":"1.02E-24"},-7.40692618288963,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: defense response to oomycetes (GO:0002229);; Molecular Function: binding (GO:0005488);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: fatty acid metabolic process (GO:0006631);; Biological Process: coenzyme metabolic process (GO:0006732);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: cellular amino acid biosynthetic process (GO:0008652);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: serine family amino acid metabolic process (GO:0009069);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: cyanogenic glycoside biosynthetic process (GO:0019756);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: carbohydrate derivative biosynthetic process (GO:1901137);; ","K12154|0|brp:103872429|K12154 cytochrome P450 family 79 subfamily F polypeptide 1 [EC:1.14.13.-] | (RefSeq) CYP79F1, CYP79F2; dihomomethionine N-hydroxylase","Glucosinolate biosynthesis (ko00966);; 2-Oxocarboxylic acid metabolism (ko01210)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana OX=3702 GN=CYP79F1 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: dihomomethionine N-hydroxylase [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; biological process: immune system process (GO:0002376);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra032622","Bra032622",4.51416,511,2.790766,353,1.825799,208,1.329781,102,2.28454,173,2.804957,179,0.00593945006545166,-1.20829246057378,"down","[T]","Signal transduction mechanisms","Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to nutrient (GO:0007584);; Biological Process: response to cold (GO:0009409);; Cellular Component: plastid (GO:0009536);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to glucose (GO:0009749);; Biological Process: potassium ion import (GO:0010107);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to nitrate (GO:0010167);; Biological Process: basipetal auxin transport (GO:0010540);; Biological Process: response to mannitol (GO:0010555);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: regulation of potassium ion transport (GO:0043266);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root development (GO:0048364);; Biological Process: cellular response to potassium ion starvation (GO:0051365);; Biological Process: potassium ion homeostasis (GO:0055075);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; NAF domain;; Kinase-like","CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana OX=3702 GN=CIPK9 PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: CBL-interacting serine/threonine-protein kinase 9-like [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra002241","Bra002241",176.814343,8760,129.714553,6561,137.173266,6240,396.116167,13551,481.659584,15857,460.073912,15320,{"v":6.67212675288525e-11,"d":"6.67E-11"},1.01214838455101,"up","--","--","Molecular Function: translation elongation factor activity (GO:0003746);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: eukaryotic translation elongation factor 1 complex (GO:0005853);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translational elongation (GO:0006414);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: apoplast (GO:0048046);; ","K03232|1.42197e-114|bna:106367873|K03232 elongation factor 1-beta | (RefSeq) elongation factor 1-beta 2-like","--","[K]","Transcription","EF-1 guanine nucleotide exchange domain","Elongation factor 1-beta 2 OS=Arabidopsis thaliana OX=3702 GN=At5g19510 PE=1 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: elongation factor 1-beta 2-like [Brassica oleracea var. oleracea]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: extracellular region (GO:0005576)"]
["Bra027509","Bra027509",19.341736,4137,11.354237,2475,13.871799,2722,14.224846,2079,8.28076,1213,8.675916,1191,0.000958690493255048,-1.07428914019368,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","Protein of unknown function (DUF3741);; Domain of unknown function (DUF4378);; DUF761-associated sequence motif","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103839223 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra003707","Bra003707",30.668493,2732,52.675815,4734,57.440212,4727,14.292739,901,14.909451,906,14.836488,905,{"v":1.86667421361963e-10,"d":"1.87E-10"},-2.20843646555603,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: O-methyltransferase activity (GO:0008171);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: luteolin O-methyltransferase activity (GO:0030744);; Molecular Function: quercetin 3-O-methyltransferase activity (GO:0030755);; Biological Process: methylation (GO:0032259);; Molecular Function: myricetin 3'-O-methyltransferase activity (GO:0033799);; Biological Process: indole glucosinolate metabolic process (GO:0042343);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: caffeate O-methyltransferase activity (GO:0047763);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","--","--","[R]","General function prediction only","O-methyltransferase;; Dimerisation domain","Indole glucosinolate O-methyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=IGMT5 PE=2 SV=1","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: indole glucosinolate O-methyltransferase 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra037436","Bra037436",1.630782,44,0.693013,19,0.748835,19,9.668355,182,8.247433,150,6.898099,126,{"v":2.59469976424454e-07,"d":"2.59E-07"},2.37560276680021,"up","--","--","--","--","--","--","--","zinc-finger of the FCS-type, C2-C2","Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103875018 [Brassica rapa]","--"]
["Bra009420","Bra009420",63.847055,8009,90.283731,11459,91.763289,10830,61.104447,5532,40.918506,3518,41.677777,3624,{"v":7.4061145052215e-05,"d":"7.41E-05"},-1.31242338675197,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Molecular Function: protein phosphatase binding (GO:0019903);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","K13412|0|brp:103847252|K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 1","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; EF hand;; EF-hand domain pair;; EF-hand domain;; Protein tyrosine kinase;; EF hand;; EF-hand domain pair;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region","Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CPK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: calcium-dependent protein kinase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704)"]
["Bra005463","Bra005463",3.394352,667,2.692333,546,2.597038,427,7.358213,1022,11.939957,1486,14.192559,1821,{"v":1.18745364968828e-05,"d":"1.19E-05"},1.347977482338,"up","[V]","Defense mechanisms","--","--","--","[L]","Replication, recombination and repair","NUDIX domain","Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT22 PE=2 SV=2","L","Replication, recombination and repair","BnaA05g09750D [Brassica napus]","--"]
["Bra016675","Bra016675",19.157228,461,36.050495,876,37.942196,845,18.984655,324,13.154767,216,9.264446,153,0.000416784078780328,-1.68263517827528,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103836046 [Brassica rapa] ","--"]
["Bra000160","Bra000160",5.562415,513,2.240365,216,2.415194,210,0.948994,66,0.864154,63,1.431688,102,{"v":2.78935618789323e-05,"d":"2.79E-05"},-1.94758697198605,"down","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: establishment of planar polarity (GO:0001736);; Biological Process: amino acid transmembrane transport (GO:0003333);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: syncytium formation (GO:0006949);; Biological Process: cell adhesion (GO:0007155);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to ethylene (GO:0009723);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: positive gravitropism (GO:0009958);; Cellular Component: cell surface (GO:0009986);; Molecular Function: auxin binding (GO:0010011);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to far red light (GO:0010218);; Biological Process: lateral root formation (GO:0010311);; Molecular Function: auxin influx transmembrane transporter activity (GO:0010328);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cotyledon vascular tissue pattern formation (GO:0010588);; Molecular Function: amino acid transmembrane transporter activity (GO:0015171);; Molecular Function: symporter activity (GO:0015293);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: actin nucleation (GO:0045010);; Biological Process: root hair elongation (GO:0048767);; Biological Process: root cap development (GO:0048829);; Biological Process: auxin influx (GO:0060919);; Biological Process: cell wall organization (GO:0071555);; ","K13946|0|brp:103857897|K13946 auxin influx carrier (AUX1 LAX family) | (RefSeq) auxin transporter-like protein 1","Plant hormone signal transduction (ko04075)","[E]","Amino acid transport and metabolism","Transmembrane amino acid transporter protein","Auxin transporter-like protein 2 OS=Medicago truncatula OX=3880 GN=LAX2 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: auxin transporter-like protein 1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological adhesion (GO:0022610);; biological process: multicellular organismal process (GO:0032501);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; molecular function: binding (GO:0005488);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)"]
["Bra011528","Bra011528",12.559008,1866,25.491564,3530,31.199619,3399,5.779504,664,6.975367,706,7.700022,682,{"v":9.15761455240961e-09,"d":"9.16E-09"},-2.13614252128773,"down","--","--","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: alternative mRNA splicing, via spliceosome (GO:0000380);; Molecular Function: transcription antitermination factor activity, RNA binding (GO:0001072);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cytosol (GO:0005829);; Biological Process: glucose metabolic process (GO:0006006);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Molecular Function: poly(U) RNA binding (GO:0008266);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: pyrimidine ribonucleotide biosynthetic process (GO:0009220);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: cold acclimation (GO:0009631);; Biological Process: response to salt stress (GO:0009651);; Biological Process: etioplast organization (GO:0009662);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: seed germination (GO:0009845);; Biological Process: regulation of flower development (GO:0009909);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Cellular Component: stromule (GO:0010319);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: base conversion or substitution editing (GO:0016553);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: intracellular ribonucleoprotein complex (GO:0030529);; Biological Process: transcription antitermination (GO:0031564);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: histone lysine methylation (GO:0034968);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: RNA stabilization (GO:0043489);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: carotenoid isomerase activity (GO:0046608);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[R]","General function prediction only","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1","S","Function unknown","BnaA08g00110D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; cellular component: macromolecular complex (GO:0032991);; cellular component: extracellular region (GO:0005576)"]
["Bra011129","Bra011129",22.244192,1986,32.039906,2886,31.440966,2596,7.134081,451,1.144547,70,2.018083,124,{"v":2.27813574977034e-07,"d":"2.28E-07"},-3.34485644675405,"down","[R]","General function prediction only","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: nucleotide metabolic process (GO:0009117);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","[R]","General function prediction only","Type I phosphodiesterase / nucleotide pyrophosphatase;; Sulfatase","--","S","Function unknown","PREDICTED: venom phosphodiesterase 2-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra035121","Bra035121",19.588587,1926,8.637608,855,6.921019,629,36.207754,2518,38.468723,2574,32.763226,2203,0.0080832539877546,1.07718790628167,"up","[T]","Signal transduction mechanisms","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: RNA methylation (GO:0001510);; Molecular Function: IMP dehydrogenase activity (GO:0003938);; Cellular Component: cytosol (GO:0005829);; Biological Process: GMP biosynthetic process (GO:0006177);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Biological Process: methionine biosynthetic process (GO:0009086);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00088|0|brp:103832423|K00088 IMP dehydrogenase [EC:1.1.1.205] | (RefSeq) inosine-5'-monophosphate dehydrogenase 1","Purine metabolism (ko00230)","[F]","Nucleotide transport and metabolism","IMP dehydrogenase / GMP reductase domain;; Nitronate monooxygenase;; FMN-dependent dehydrogenase","Inosine-5&apos;-monophosphate dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=IMPDH PE=2 SV=1","F","Nucleotide transport and metabolism","PREDICTED: inosine-5&apos;-monophosphate dehydrogenase 1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179)"]
["Bra029656","Bra029656",1.289269,100,0.622861,49,0.776345,56,4.612709,251,5.905198,309,6.246893,329,{"v":8.35015428062762e-09,"d":"8.35E-09"},2.04990129125719,"up","[K]","Transcription","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: defense response (GO:0006952);; Biological Process: cell communication (GO:0007154);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: lateral root development (GO:0048527);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; ","--","--","[R]","General function prediction only","Leucine Rich repeat;; Leucine Rich repeats (2 copies)","F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana OX=3702 GN=FBL12 PE=2 SV=1","S","Function unknown","PREDICTED: F-box/LRR-repeat protein 12 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704)"]
["Bra021033","Bra021033",2.981309,273,8.396706,767,9.127425,774,0.995803,64,0.751767,47,0.29734,14,{"v":4.36597333589846e-08,"d":"4.37E-08"},-3.64534508040709,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: seed germination (GO:0009845);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103834032|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB39-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB39 OS=Arabidopsis thaliana OX=3702 GN=MYB39 PE=2 SV=1","K","Transcription","PREDICTED: transcription factor MYB39-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: multicellular organismal process (GO:0032501);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414)"]
["Bra039719","Bra039719",3.061375,303,1.918261,204,1.312158,138,13.577,1010,14.607064,1022,14.134771,1056,{"v":7.52237348457279e-16,"d":"7.52E-16"},2.21245244821193,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: phosphatidylinositol binding (GO:0035091);; ","--","--","--","--","Auxin canalisation;; Plant pleckstrin homology-like region","VAN3-binding protein OS=Arabidopsis thaliana OX=3702 GN=VAB PE=1 SV=1","S","Function unknown","PREDICTED: VAN3-binding protein-like isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra037139","Bra037139",19.515071,2746,22.119116,3103,22.641787,2926,5.957688,585,2.901033,271,3.397856,334,{"v":1.6644975681877e-16,"d":"1.66E-16"},-2.88624136692023,"down","[K]","Transcription","Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: defense response (GO:0006952);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Molecular Function: ADP binding (GO:0043531);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","NB-ARC domain;; Arabidopsis broad-spectrum mildew resistance protein RPW8;; Leucine Rich repeats (2 copies)","Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana OX=3702 GN=At5g66900 PE=3 SV=1","S","Function unknown","PREDICTED: probable disease resistance protein At5g66900 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra015957","Bra015957",0.492999,105,1.109484,264,1.3246,280,0.137077,26,0.04259,8,0.208227,37,{"v":2.21472132826644e-05,"d":"2.21E-05"},-2.99835676007414,"down","--","--","Cellular Component: intracellular part (GO:0044424);; ","K10406|0|bna:106357246|K10406 kinesin family member C2/C3 | (RefSeq) kinesin-4-like","--","[Z]","Cytoskeleton","Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-14P OS=Arabidopsis thaliana OX=3702 GN=KIN14P PE=2 SV=1","Z","Cytoskeleton","PREDICTED: kinesin-4 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Brassica_rapa_newGene_22316","--",0.689809,156,1.80983,412,1.7495,365,0.268119,43,0.046238,8,0.137858,22,{"v":6.96226507587535e-07,"d":"6.96E-07"},-3.44571494659777,"down","--","--","Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: primary metabolic process (GO:0044238);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","[R]","General function prediction only","Reverse transcriptase (RNA-dependent DNA polymerase);; Integrase core domain;; Retroviral aspartyl protease;; gag-polyprotein putative aspartyl protease;; Aspartyl protease","RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC106404382 [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)"]
["Bra008253","Bra008253",1.025642,76,0.836003,66,0.430634,35,2.110412,107,3.340959,153,4.275393,206,0.00637996127832456,1.32405599215878,"up","--","--","--","--","--","--","--","--","F-box/LRR-repeat protein At1g48400 OS=Arabidopsis thaliana OX=3702 GN=At1g48400 PE=2 SV=2","--","--","PREDICTED: F-box/LRR-repeat protein At1g48400-like [Brassica rapa] ","--"]
["Bra003150","Bra003150",47.847942,1291,41.519535,1130,38.580402,963,39.419247,753,17.942959,330,15.671277,290,0.00278276890124227,-1.30953548295384,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleolus (GO:0005730);; Biological Process: nucleosome assembly (GO:0006334);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11252|2.53572e-58|brp:103829945|K11252 histone H2B | (RefSeq) histone H2B.8","--","[B]","Chromatin structure and dynamics","Core histone H2A/H2B/H3/H4","Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3","B","Chromatin structure and dynamics","PREDICTED: histone H2B.8 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra034943","Bra034943",101.841286,10768,33.768999,3618,35.802199,3500,44.671248,3338,16.364581,1179,14.105703,1033,0.00868353474718867,-1.58172784625219,"down","[R]","General function prediction only","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Molecular Function: L-ascorbate oxidase activity (GO:0008447);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: cellulose metabolic process (GO:0030243);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: L-ascorbate oxidase homolog [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; cellular component: extracellular region (GO:0005576)"]
["Bra028404","Bra028404",2.170595,169,1.808404,117,1.332232,96,7.86435,383,6.746982,356,6.449772,300,{"v":3.38379129864778e-07,"d":"3.38E-07"},1.39626410470474,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: mRNA processing (GO:0006397);; Biological Process: translation (GO:0006412);; Biological Process: heme biosynthetic process (GO:0006783);; Biological Process: RNA splicing (GO:0008380);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: mRNA modification (GO:0016556);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: intracellular ribonucleoprotein complex (GO:0030529);; ","K01056|0|brp:103850111|K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] | (RefSeq) chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic","--","[J]","Translation, ribosomal structure and biogenesis","Peptidyl-tRNA hydrolase","Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2A PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991)"]
["Bra011525","Bra011525",5.090919,475,11.177678,1051,6.333127,546,0.008188,1,0.191244,13,0.031766,3,{"v":6.63206109669717e-19,"d":"6.63E-19"},-6.2757436000386,"down","[K]","Transcription","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: multicellular organism development (GO:0007275);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; Molecular Function: transferase activity (GO:0016740);; Cellular Component: macromolecular complex (GO:0032991);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: response to stimulus (GO:0050896);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[R]","General function prediction only","WD domain, G-beta repeat;; PQQ-like domain;; Nucleoporin Nup120/160","Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103838614 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896)"]
["Bra023790","Bra023790",199.941086,39489,275.471619,54903,236.858475,43275,52.547779,7343,11.565742,1556,10.755224,1456,{"v":1.29432461648128e-08,"d":"1.29E-08"},-3.54190868392849,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: cellular zinc ion homeostasis (GO:0006882);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to nematode (GO:0009624);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to ethylene (GO:0009723);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Molecular Function: protein self-association (GO:0043621);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: anion homeostasis (GO:0055081);; Biological Process: calcium ion transmembrane transport (GO:0070588);; ","K01537|0|brp:103834245|K01537 Ca2+-transporting ATPase [EC:3.6.3.8] | (RefSeq) putative calcium-transporting ATPase 13, plasma membrane-type","--","[P]","Inorganic ion transport and metabolism","Cation transporting ATPase, C-terminus;; E1-E2 ATPase;; haloacid dehalogenase-like hydrolase;; Cation transport ATPase (P-type);; Cation transporter/ATPase, N-terminus","Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA13 PE=3 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052)"]
["Bra005450","Bra005450",1.314803,206,2.726598,415,3.297616,435,1.11018,113,0.306998,32,0.494031,40,0.000143427298934313,-2.43134784607331,"down","--","--","--","--","--","--","--","--","Protein SCAR1 OS=Arabidopsis thaliana OX=3702 GN=SCAR1 PE=1 SV=1","S","Function unknown","PREDICTED: protein SCAR1 [Brassica rapa]","--"]
["Bra006743","Bra006743",19.245701,1923,22.271156,2246,17.62973,1630,1.452887,103,0.751418,52,0.978603,68,{"v":4.99579289237935e-50,"d":"5.00E-50"},-4.66946361664208,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: fatty acid metabolic process (GO:0006631);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: chloroplast (GO:0009507);; Biological Process: suberin biosynthetic process (GO:0010345);; Molecular Function: alkane 1-monooxygenase activity (GO:0018685);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: very long-chain fatty acid biosynthetic process (GO:0042761);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: aromatase activity (GO:0070330);; ","K15401|0|brp:103856662|K15401 fatty acid omega-hydroxylase [EC:1.14.-.-] | (RefSeq) cytochrome P450 86A1-like","Cutin, suberine and wax biosynthesis (ko00073)","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Cytochrome P450 86A1 OS=Arabidopsis thaliana OX=3702 GN=CYP86A1 PE=1 SV=2","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 86A1-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: electron carrier activity (GO:0009055);; molecular function: catalytic activity (GO:0003824)"]
["Bra006059","Bra006059",1.987442,199,5.7374,561,5.093735,456,0.131207,12,0.129099,11,0.047157,5,{"v":1.85929411793579e-17,"d":"1.86E-17"},-5.14823800216461,"down","[V]","Defense mechanisms","Cellular Component: plasma membrane (GO:0005886);; Biological Process: drug transmembrane transport (GO:0006855);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: fruit ripening (GO:0009835);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: maintenance of seed dormancy (GO:0010231);; Molecular Function: drug transmembrane transporter activity (GO:0015238);; Molecular Function: antiporter activity (GO:0015297);; Molecular Function: solute:proton antiporter activity (GO:0015299);; Biological Process: single-organism transport (GO:0044765);; Biological Process: organic substance transport (GO:0071702);; ","K03327|0|brp:103855865|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 28-like","--","[R]","General function prediction only","MatE","Protein DETOXIFICATION 28 OS=Arabidopsis thaliana OX=3702 GN=DTX28 PE=3 SV=1","V","Defense mechanisms","PREDICTED: protein DETOXIFICATION 28-like isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: reproduction (GO:0000003);; biological process: multicellular organismal process (GO:0032501);; molecular function: transporter activity (GO:0005215)"]
["Bra034191","Bra034191",1.462746,167,1.429366,164,1.178777,124,0.176419,15,0,0,0.052039,5,{"v":6.22771239136607e-06,"d":"6.23E-06"},-3.88938164848305,"down","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Molecular Function: inositol hexakisphosphate binding (GO:0000822);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuolar membrane (GO:0005774);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: defense response (GO:0006952);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Molecular Function: auxin binding (GO:0010011);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: pollen maturation (GO:0010152);; Biological Process: lateral root formation (GO:0010311);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: regulation of circadian rhythm (GO:0042752);; Cellular Component: nuclear SCF ubiquitin ligase complex (GO:0043224);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: negative regulation of transcription by glucose (GO:0045014);; Biological Process: stamen development (GO:0048443);; Biological Process: lateral root development (GO:0048527);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cellular response to nitrate (GO:0071249);; Biological Process: cell wall organization (GO:0071555);; Biological Process: primary root development (GO:0080022);; ","K14485|0|brp:103846823|K14485 transport inhibitor response 1 | (RefSeq) GRR1-like protein 1","Plant hormone signal transduction (ko04075)","[R]","General function prediction only","F-box-like;; F-box domain","GRR1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=GRH1 PE=1 SV=1","S","Function unknown","BnaA09g01370D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; cellular component: macromolecular complex (GO:0032991);; biological process: reproductive process (GO:0022414)"]
["Bra029107","Bra029107",36.046121,1609,30.084651,1402,22.830424,946,9.081405,271,6.400296,220,7.796749,255,{"v":2.03348962917191e-26,"d":"2.03E-26"},-2.41702750063611,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 13 OS=Arabidopsis thaliana OX=3702 GN=HIPP13 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103857113 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)"]
["Bra006512","Bra006512",5.260431,238,4.14593,190,3.067259,130,11.399684,365,17.676203,554,16.451752,510,{"v":5.10978242911141e-05,"d":"5.11E-05"},1.30887011259995,"up","--","--","Molecular Function: aminopeptidase activity (GO:0004177);; Biological Process: proteolysis (GO:0006508);; ","K07018|2.45755e-152|brp:103856388|K07018 uncharacterized protein | (RefSeq) uncharacterized LOC103856388","--","--","--","Serine aminopeptidase, S33;; X-Pro dipeptidyl-peptidase (S15 family);; alpha/beta hydrolase fold;; alpha/beta hydrolase fold","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103856388 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra020359","Bra020359",13.744611,1604,37.447966,4629,42.623987,4615,5.934397,498,3.327684,267,3.329209,268,{"v":3.42890066588423e-10,"d":"3.43E-10"},-3.32752352603674,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: phosphatidylinositol phospholipase C activity (GO:0004435);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to salt stress (GO:0009651);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: D-xylose metabolic process (GO:0042732);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: Golgi localization (GO:0051645);; Biological Process: mitochondrion localization (GO:0051646);; Biological Process: calcium ion homeostasis (GO:0055074);; Biological Process: peroxisome localization (GO:0060151);; ","K05857|0|brp:103851627|K05857 phosphatidylinositol phospholipase C, delta [EC:3.1.4.11] | (RefSeq) phosphoinositide phospholipase C 4","Inositol phosphate metabolism (ko00562);; Phosphatidylinositol signaling system (ko04070);; AGE-RAGE signaling pathway in diabetic complications (ko04933)","[T]","Signal transduction mechanisms","Phosphatidylinositol-specific phospholipase C, X domain;; Phosphatidylinositol-specific phospholipase C, Y domain;; C2 domain","Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana OX=3702 GN=PLC4 PE=2 SV=2","S","Function unknown","phosphoinositide phospholipase C 4 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra015009","Bra015009",3.812276,207,3.398286,189,3.275262,157,11.510585,437,10.460376,414,11.671782,390,{"v":6.05603429139155e-09,"d":"6.06E-09"},1.11460700919747,"up","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: kinase activity (GO:0016301);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cytoplasmic part (GO:0044444);; ","K13448|2.53802e-146|brp:103828670|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML22","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF-hand domain pair;; EF-hand domain;; EF hand;; EF hand","Probable calcium-binding protein CML22 OS=Arabidopsis thaliana OX=3702 GN=CML22 PE=3 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","probable calcium-binding protein CML22 isoform X1 [Brassica napus]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226)"]
["Bra004396","Bra004396",0.548365,40,1.497769,109,1.211874,81,5.668179,288,5.150084,252,5.918424,291,0.00092973147463649,1.68622377686601,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: floral organ abscission (GO:0010227);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: root development (GO:0048364);; ","--","--","--","--","Dof domain, zinc finger","Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1","--","--","PREDICTED: cyclic dof factor 5-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra027702","Bra027702",16.376619,1586,15.8406,1548,16.981028,1521,4.322735,297,3.803751,251,8.753098,581,{"v":1.76546086927562e-07,"d":"1.77E-07"},-2.04210698600885,"down","--","--","Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuolar membrane (GO:0005774);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; ","--","--","[T]","Signal transduction mechanisms","Phosphatidylinositol 3- and 4-kinase;; Ubiquitin family","Phosphatidylinositol 4-kinase gamma 2 OS=Arabidopsis thaliana OX=3702 GN=PI4KG2 PE=1 SV=2","S","Function unknown","PREDICTED: phosphatidylinositol 4-kinase gamma 2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra040248","Bra040248",49.413322,14152,50.161021,14440,54.18137,14280,21.338729,4256,20.611373,3968,22.255133,4281,{"v":5.56776511036681e-31,"d":"5.57E-31"},-1.82847038122742,"down","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to cold (GO:0009409);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: maintenance of meristem identity (GO:0010074);; Biological Process: response to nitrate (GO:0010167);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: regulation of organelle organization (GO:0033043);; Cellular Component: polar nucleus (GO:0043078);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: root development (GO:0048364);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: phyllome development (GO:0048827);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: cell wall organization (GO:0071555);; Cellular Component: pollen tube (GO:0090406);; ","--","--","[K]","Transcription","SRF-type transcription factor (DNA-binding and dimerisation domain)","Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1","K","Transcription","PREDICTED: agamous-like MADS-box protein AGL90 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179)"]
["Bra013314","Bra013314",1.689084,144,1.304569,133,0.937015,76,5.355128,318,5.752899,349,9.138274,539,{"v":9.66801949939424e-06,"d":"9.67E-06"},1.7016143736991,"up","[H]","Coenzyme transport and metabolism","Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: rRNA processing (GO:0006364);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: cyanelle (GO:0009842);; Cellular Component: magnesium chelatase complex (GO:0010007);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: magnesium chelatase activity (GO:0016851);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; ","K03405|0|brp:103856423|K03405 magnesium chelatase subunit I [EC:6.6.1.1] | (RefSeq) magnesium-chelatase subunit ChlI-1, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","--","--","Magnesium chelatase, subunit ChlI;; MCM2/3/5 family;; AAA domain (dynein-related subfamily);; Sigma-54 interaction domain","Magnesium-chelatase subunit ChlI-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLI1 PE=1 SV=1","H","Coenzyme transport and metabolism","PREDICTED: magnesium-chelatase subunit ChlI-1, chloroplastic [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824)"]
["Bra021006","Bra021006",0.03228,4,0.014099,2,0,0,0.609211,46,2.44247,181,2.333807,183,{"v":2.21140614459942e-09,"d":"2.21E-09"},5.12637781324299,"up","--","--","--","--","--","--","--","--","--","--","--","BnaA10g07150D [Brassica napus]","--"]
["Bra006018","Bra006018",0.107279,3,0.123498,4,0.198954,6,9.082619,180,8.495394,162,10.589449,203,{"v":3.16524496154658e-22,"d":"3.17E-22"},5.04643916611277,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","K06170|2.12689e-89|brp:103855816|K06170 presenilin enhancer 2 | (RefSeq) probable gamma-secretase subunit PEN-2","--","[S]","Function unknown","Presenilin enhancer-2 subunit of gamma secretase","Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana OX=3702 GN=At5g09310 PE=2 SV=1","S","Function unknown","PREDICTED: probable gamma-secretase subunit PEN-2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra002276","Bra002276",0.091594,9,0.153493,15,0.10082,9,1.225414,80,2.201209,138,2.265911,143,{"v":4.11495978878132e-09,"d":"4.11E-09"},3.213024627833,"up","--","--","Molecular Function: structural molecule activity (GO:0005198);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","--","--","PAP_fibrillin","Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP8 PE=1 SV=1","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: probable plastid-lipid-associated protein 8, chloroplastic [Brassica rapa]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra018864","Bra018864",19.938114,790,22.009073,880,20.762985,761,16.213104,454,14.451704,390,15.129398,411,{"v":8.24259853712019e-07,"d":"8.24E-07"},-1.0047479264055,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: embryonic pattern specification (GO:0009880);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: response to chitin (GO:0010200);; Cellular Component: membrane (GO:0016020);; Cellular Component: nuclear body (GO:0016604);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cotyledon development (GO:0048825);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of cell cycle (GO:0051726);; ","K09286|1.01301e-82|brp:103871331|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor 3","--","--","--","AP2 domain","Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor 3 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704)"]
["Bra011537","Bra011537",53.580642,6212,16.889649,1686,23.768879,2589,14.792605,1034,18.214764,1267,16.018796,1090,0.000702322811029954,-1.56281678686231,"down","--","--","Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: cell communication (GO:0007154);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: flower development (GO:0009908);; Biological Process: pollen exine formation (GO:0010584);; Biological Process: histone modification (GO:0016570);; Biological Process: gene silencing by RNA (GO:0031047);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; Molecular Function: cation binding (GO:0043169);; Biological Process: macromolecule methylation (GO:0043414);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","--","Glycosyl hydrolases family 17;; X8 domain","Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: glucan endo-1,3-beta-glucosidase 7 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: membrane part (GO:0044425)"]
["Bra030303","Bra030303",0.7857,155,0.165106,39,0.279139,55,2.048338,293,2.146305,290,3.2494,436,0.000490957588620602,1.94081996697755,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: glycolytic process (GO:0006096);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to salt stress (GO:0009651);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: chloroplast relocation (GO:0009902);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to red light (GO:0010114);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Cellular Component: plastoglobule (GO:0010287);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Cellular Component: membrane (GO:0016020);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: thylakoid lumen (GO:0031977);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; ","K01623|0|brp:103864267|K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | (RefSeq) fructose-bisphosphate aldolase 1, chloroplastic","Glycolysis / Gluconeogenesis (ko00010);; Pentose phosphate pathway (ko00030);; Fructose and mannose metabolism (ko00051);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)","[G]","Carbohydrate transport and metabolism","Fructose-bisphosphate aldolase class-I","Fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FBA1 PE=1 SV=2","G","Carbohydrate transport and metabolism","BnaA04g12130D [Brassica napus]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; biological process: biological regulation (GO:0065007);; cellular component: extracellular region (GO:0005576)"]
["Bra027263","Bra027263",9.649933,559,9.214708,543,9.875301,531,23.394283,960,32.865762,1317,33.769651,1336,{"v":8.80058406251275e-06,"d":"8.80E-06"},1.08245592717647,"up","[I]","Lipid transport and metabolism","Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity (GO:0003857);; Cellular Component: peroxisome (GO:0005777);; Biological Process: fatty acid metabolic process (GO:0006631);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: 3-hydroxybutyryl-CoA dehydrogenase activity (GO:0008691);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: photorespiration (GO:0009853);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: hydro-lyase activity (GO:0016836);; Molecular Function: isomerase activity (GO:0016853);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: NAD+ binding (GO:0070403);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organic substance catabolic process (GO:1901575);; ","K00074|0|brp:103869940|K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] | (RefSeq) 3-hydroxybutyryl-CoA dehydrogenase","Phenylalanine metabolism (ko00360);; Butanoate metabolism (ko00650)","[I]","Lipid transport and metabolism","3-hydroxyacyl-CoA dehydrogenase, NAD binding domain;; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;; NAD binding domain of 6-phosphogluconate dehydrogenase","Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 OS=Arabidopsis thaliana OX=3702 GN=MFP2 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: uncharacterized protein LOC103869940 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)"]
["Bra040638","Bra040638",0.881694,35,1.840621,75,1.574285,59,56.655794,1562,58.785704,1614,73.777467,1952,{"v":6.06805606309345e-37,"d":"6.07E-37"},4.71957736234032,"up","[IQ]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process (GO:0000036);; Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Cellular Component: cytosol (GO:0005829);; Biological Process: rRNA processing (GO:0006364);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to sucrose (GO:0009744);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: phosphopantetheine binding (GO:0031177);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: cuticle development (GO:0042335);; Biological Process: defense response to virus (GO:0051607);; ","--","--","[CIQ]","Energy production and conversion;; Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","Phosphopantetheine attachment site","Acyl carrier protein, chloroplastic OS=Brassica napus OX=3708 GN=ACL1.C1 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: acyl carrier protein, chloroplastic [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502)"]
["Bra001789","Bra001789",102.720643,12124,89.730917,10733,89.98632,9817,38.715535,3284,46.357979,3897,10.532985,1443,{"v":1.38377055357858e-06,"d":"1.38E-06"},-1.9159589478293,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: ammonium transport (GO:0015696);; Biological Process: basic amino acid transport (GO:0015802);; Molecular Function: protein phosphatase binding (GO:0019903);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of pollen tube growth (GO:0080092);; ","K13412|0|brp:103859857|K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 9","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","Protein kinase domain;; EF hand;; Protein tyrosine kinase;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain pair;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region","Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana OX=3702 GN=CPK9 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: calcium-dependent protein kinase 9 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704)"]
["Bra012599","Bra012599",9.883037,211,6.586163,142,9.205247,182,22.8451,345,48.131588,700,50.514907,741,{"v":6.39975945494731e-05,"d":"6.40E-05"},1.64944723373719,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: E3 ubiquitin-protein ligase RNF19B-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra033449","Bra033449",6.504237,735,9.494027,1223,11.321398,1311,6.745298,531,6.840352,377,9.490497,540,0.00214206877100753,-1.23182389567153,"down","[R]","General function prediction only","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: protein binding (GO:0005515);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: protein tyrosine/serine/threonine phosphatase activity (GO:0008138);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: carbohydrate phosphatase activity (GO:0019203);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: polysaccharide binding (GO:0030247);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Molecular Function: sugar-phosphatase activity (GO:0050308);; Molecular Function: starch binding (GO:2001070);; ","--","--","[V]","Defense mechanisms","Glycogen recognition site of AMP-activated protein kinase;; Dual specificity phosphatase, catalytic domain;; WD domain, G-beta repeat","Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: phosphoglucan phosphatase DSP4, chloroplastic-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: rhythmic process (GO:0048511);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)"]
["Bra024651","Bra024651",7.205748,1607,7.708622,1733,7.74513,1608,5.607575,892,3.43982,528,4.962177,757,{"v":1.0302948539016e-05,"d":"1.03E-05"},-1.23021040763636,"down","[K]","Transcription","Biological Process: immune system process (GO:0002376);; Molecular Function: binding (GO:0005488);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: tissue development (GO:0009888);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Biological Process: response to chemical (GO:0042221);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: ADP binding (GO:0043531);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","TIR domain;; NB-ARC domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; TIR domain;; Leucine Rich Repeat","Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=SNC1 PE=1 SV=5","S","Function unknown","PREDICTED: disease resistance protein TAO1-like isoform X1 [Brassica rapa] ","biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)"]
["Bra022412","Bra022412",3.387333,303,5.949509,536,6.823104,564,1.069668,68,1.446498,88,1.682417,103,{"v":3.16393716563094e-08,"d":"3.16E-08"},-2.43908045448244,"down","[K]","Transcription","Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ion transport (GO:0006811);; Biological Process: defense response (GO:0006952);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to bacterium (GO:0009617);; Biological Process: embryo development (GO:0009790);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: trichoblast differentiation (GO:0010054);; Cellular Component: membrane (GO:0016020);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cell wall modification (GO:0042545);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: phyllome development (GO:0048827);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Uncharacterized protein At4g06744 OS=Arabidopsis thaliana OX=3702 GN=At4g06744 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At4g06744 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414)"]
["Bra001787","Bra001787",33.42315,3492,85.058119,9041,95.772681,9403,9.323762,730,2.333662,193,3.088311,243,{"v":5.17145524518077e-11,"d":"5.17E-11"},-4.044212516985,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: membrane (GO:0016020);; Biological Process: regulation of anthocyanin biosynthetic process (GO:0031540);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism process (GO:0044699);; ","--","--","[DR]","Cell cycle control, cell division, chromosome partitioning;; General function prediction only","MATH domain;; PPR repeat","MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1","S","Function unknown","BnaC03g41590D [Brassica napus]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699)"]
["Bra030417","Bra030417",10.840158,2576,31.873262,7529,32.79388,7051,9.725373,1618,4.64896,746,4.618329,740,{"v":1.09509941847797e-05,"d":"1.10E-05"},-2.4400756368616,"down","[T]","Signal transduction mechanisms","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cation transport (GO:0006812);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: amino acid transport (GO:0006865);; Biological Process: immune response (GO:0006955);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: endosperm development (GO:0009960);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chitin (GO:0010200);; Molecular Function: kinase activity (GO:0016301);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Carbohydrate-binding protein of the ER;; Protein kinase domain;; Protein tyrosine kinase","Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana OX=3702 GN=At1g51860 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880 isoform X2 [Brassica rapa] ","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra010139","Bra010139",38.986098,2831,105.432746,7722,102.907944,6909,0.482487,25,0.653028,34,0.415856,23,{"v":8.07874099765105e-54,"d":"8.08E-54"},-7.47674541852226,"down","--","--","Biological Process: amino acid transmembrane transport (GO:0003333);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: Golgi to vacuole transport (GO:0006896);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abiotic stimulus (GO:0009628);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: tissue development (GO:0009888);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: response to organic substance (GO:0010033);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: amino acid export (GO:0032973);; Molecular Function: L-amino acid efflux transmembrane transporter activity (GO:0034639);; Biological Process: amino acid import (GO:0043090);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: regulation of intracellular pH (GO:0051453);; Biological Process: amino acid homeostasis (GO:0080144);; Biological Process: lytic vacuole organization (GO:0080171);; Biological Process: positive regulation of auxin metabolic process (GO:0090355);; Biological Process: positive regulation of tryptophan metabolic process (GO:0090358);; ","--","--","--","--","EamA-like transporter family","WAT1-related protein At4g08300 OS=Arabidopsis thaliana OX=3702 GN=At4g08300 PE=2 SV=1","S","Function unknown","PREDICTED: WAT1-related protein At4g08300 isoform X1 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: transporter activity (GO:0005215);; biological process: biological regulation (GO:0065007)"]
["Bra033117","Bra033117",1.483318,95,2.229294,139,2.611508,148,9.306173,395,12.69966,494,11.746207,486,{"v":1.75779339464552e-06,"d":"1.76E-06"},1.73063158680941,"up","[I]","Lipid transport and metabolism","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: nucleus (GO:0005634);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: sphingoid biosynthetic process (GO:0046520);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation (GO:0080064);; Biological Process: 4-alpha-methyl-delta7-sterol oxidation (GO:0080065);; ","K14423|0|brp:103853483|K14423 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase [EC:1.14.13.72] | (RefSeq) methylsterol monooxygenase 1-1","Steroid biosynthesis (ko00100)","[I]","Lipid transport and metabolism","Fatty acid hydroxylase superfamily","Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana OX=3702 GN=SMO1-1 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: methylsterol monooxygenase 1-1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Bra002751","Bra002751",18.851612,1957,46.016008,4782,45.312065,4324,6.754753,504,2.876696,213,3.849866,290,{"v":1.51661429914903e-11,"d":"1.52E-11"},-3.39814883942432,"down","[I]","Lipid transport and metabolism","Molecular Function: phosphatidylserine decarboxylase activity (GO:0004609);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: phospholipid biosynthetic process (GO:0008654);; Cellular Component: plant-type vacuole membrane (GO:0009705);; ","K01613|0|brp:103846141|K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] | (RefSeq) phosphatidylserine decarboxylase proenzyme 2","Glycerophospholipid metabolism (ko00564)","[I]","Lipid transport and metabolism","Phosphatidylserine decarboxylase;; EF hand;; EF hand;; EF-hand domain pair;; EF-hand domain;; EF-hand domain pair;; C2 domain","Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana OX=3702 GN=PSD2 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: phosphatidylserine decarboxylase proenzyme 2, partial [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422)"]
["Bra037578","Bra037578",77.646828,2938,166.965607,6375,123.781761,4333,53.145725,1423,28.487621,734,21.521639,558,{"v":2.02330582439349e-06,"d":"2.02E-06"},-2.31718792600066,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103837998 [Brassica rapa] ","--"]
["Bra021591","Bra021591",2.140729,172,3.277588,265,2.89085,214,1.53937,88,1.186252,65,1.229574,68,{"v":4.08575939086972e-05,"d":"4.09E-05"},-1.59031698656664,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; ","--","--","--","--","Protein of unknown function (DUF3082)","--","S","Function unknown","BnaA01g29000D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422)"]
["Bra024115","Bra024115",158.605341,14426,286.738465,29559,317.073176,31371,32.952266,2351,16.28272,950,16.521564,1192,{"v":3.36150851963684e-16,"d":"3.36E-16"},-3.99030232346404,"down","--","--","Biological Process: cell fate specification (GO:0001708);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: defense response (GO:0006952);; Biological Process: organelle organization (GO:0006996);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: stomatal complex development (GO:0010374);; Molecular Function: bHLH transcription factor binding (GO:0043425);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: shoot system development (GO:0048367);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: localization (GO:0051179);; Biological Process: cellular response to chemical stimulus (GO:0070887);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1","K","Transcription","BnaA03g49880D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: localization (GO:0051179)"]
["Bra013748","Bra013748",13.50731,2435,25.661726,5137,26.781387,4840,6.532029,931,6.477266,890,4.760109,611,{"v":1.89422854583285e-08,"d":"1.89E-08"},-2.37030666063091,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: floral organ development (GO:0048437);; Biological Process: phyllome development (GO:0048827);; ","K14486|0|brp:103861608|K14486 auxin response factor | (RefSeq) ARF9-1; auxin response factor 9","Plant hormone signal transduction (ko04075)","--","--","Auxin response factor;; B3 DNA binding domain;; AUX/IAA family","Auxin response factor 9 OS=Arabidopsis thaliana OX=3702 GN=ARF9 PE=1 SV=1","K","Transcription","auxin response factor 9-1 [Brassica rapa subsp. pekinensis]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra026889","Bra026889",1.072782,99,0.973754,95,0.609308,49,5.57882,358,4.864093,293,3.694329,229,{"v":2.87183743214003e-06,"d":"2.87E-06"},1.78027723007478,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Cellular Component: nucleus (GO:0005634);; Biological Process: RNA processing (GO:0006396);; Biological Process: meiosis I (GO:0007127);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone methylation (GO:0016571);; Biological Process: protein deubiquitination (GO:0016579);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","--","--","FBD","F-box/FBD/LRR-repeat protein At1g13780 OS=Arabidopsis thaliana OX=3702 GN=At1g13780 PE=2 SV=1","S","Function unknown","PREDICTED: F-box/FBD/LRR-repeat protein At1g13780-like isoform X3 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra027594","Bra027594",103.44092,7104,175.055567,11276,202.156854,12106,40.951465,1945,17.504244,777,22.01327,1020,{"v":2.12648228901416e-11,"d":"2.13E-11"},-3.00786495066445,"down","--","--","Molecular Function: structural molecule activity (GO:0005198);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: regulation of defense response (GO:0031347);; Molecular Function: purine ribonucleoside binding (GO:0032550);; Molecular Function: purine ribonucleotide binding (GO:0032555);; Molecular Function: anion binding (GO:0043168);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism process (GO:0044699);; Biological Process: innate immune response (GO:0045087);; ","--","--","--","--","TIR domain;; TIR domain","Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1","S","Function unknown","PREDICTED: protein PHLOEM PROTEIN 2-LIKE A6 [Brassica rapa]","molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376)"]
["Bra035056","Bra035056",1.330728,159,0.265561,43,0.276442,37,2.05717,271,2.767492,230,3.39375,370,0.00364279896900212,1.77913247809174,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: cell wall (GO:0005618);; Cellular Component: vacuole (GO:0005773);; Biological Process: glutamine metabolic process (GO:0006541);; Biological Process: water transport (GO:0006833);; Molecular Function: omega peptidase activity (GO:0008242);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: tetrahydrofolylpolyglutamate metabolic process (GO:0046900);; ","K01307|0|brp:103832344|K01307 gamma-glutamyl hydrolase [EC:3.4.19.9] | (RefSeq) probable gamma-glutamyl hydrolase 3","Folate biosynthesis (ko00790)","[H]","Coenzyme transport and metabolism","Peptidase C26;; Glutamine amidotransferase class-I","Probable gamma-glutamyl hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=GGH3 PE=2 SV=1","S","Function unknown","PREDICTED: probable gamma-glutamyl hydrolase 3 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896)"]
["Bra011656","Bra011656",78.311348,2431,158.232132,4957,125.97332,3618,61.394836,1349,41.259201,873,41.043076,874,{"v":3.12137527049188e-06,"d":"3.12E-06"},-1.86226159494031,"down","[O]","Posttranslational modification, protein turnover, chaperones","Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi stack (GO:0005795);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Biological Process: response to stress (GO:0006950);; Molecular Function: cytoskeletal protein binding (GO:0008092);; Cellular Component: chloroplast (GO:0009507);; Biological Process: phototropism (GO:0009638);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: cellulose biosynthetic process (GO:0030244);; Molecular Function: heat shock protein binding (GO:0031072);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","DnaJ domain","Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: chaperone protein dnaJ 11, chloroplastic [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra027057","Bra027057",123.832169,13286,258.496826,27987,270.112793,26809,172.090408,13062,100.8256,7367,102.345505,7525,0.00366510973659867,-1.3359873794945,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Biological Process: regulation of immune system process (GO:0002682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: amino acid import (GO:0043090);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to boron-containing substance deprivation (GO:0080169);; ","--","--","--","--","WRKY DNA -binding domain","WRKY transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=WRKY6 PE=1 SV=1","K","Transcription","WRKY transcription factor 6 [Brassica napus] ","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra022641","Bra022641",8.316105,104,22.004156,276,19.699249,227,7.050564,62,2.883845,25,3.733253,32,0.000240672502578625,-2.28758930881028,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: iron ion transport (GO:0006826);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Cellular Component: anchored component of membrane (GO:0031225);; ","--","--","--","--","Arabinogalactan peptide","Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1","S","Function unknown","PREDICTED: arabinogalactan peptide 22 [Raphanus sativus] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane part (GO:0044425)"]
["Bra003566","Bra003566",11.343289,383,11.038515,377,12.268446,384,2.556531,62,1.145077,27,1.303923,31,{"v":3.72792598761702e-15,"d":"3.73E-15"},-3.21665146885793,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: amino acid import (GO:0043090);; ","--","--","--","--","VQ motif","VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1","S","Function unknown","PREDICTED: VQ motif-containing protein 11-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra031766","Bra031766",104.554661,9889,44.541154,3363,42.027185,3086,34.591271,2360,24.350074,1655,22.042954,1674,0.00155565264931006,-1.45471542172429,"down","[T]","Signal transduction mechanisms","Biological Process: immune system process (GO:0002376);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: defense response (GO:0006952);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: pollen-pistil interaction (GO:0009875);; Biological Process: response to organic substance (GO:0010033);; Biological Process: membrane organization (GO:0016044);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: regulation of programmed cell death (GO:0043067);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: recognition of pollen (GO:0048544);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; S-locus glycoprotein domain;; D-mannose binding lectin;; PAN-like domain;; Domain of unknown function (DUF3403)","G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3","T","Signal transduction mechanisms","BnaA09g47640D [Brassica napus]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra021926","Bra021926",21.148892,3322,7.601365,1194,8.764808,1263,32.208214,3622,46.519517,5008,42.466794,4697,0.00535140309004915,1.18027294329771,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Biological Process: cell adhesion (GO:0007155);; Biological Process: positive regulation of cell proliferation (GO:0008284);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to auxin (GO:0009733);; Biological Process: seed germination (GO:0009845);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: embryonic pattern specification (GO:0009880);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: procambium histogenesis (GO:0010067);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: xylem development (GO:0010089);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of cell cycle process (GO:0010564);; Biological Process: cell growth (GO:0016049);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: lipid storage (GO:0019915);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Biological Process: cell wall biogenesis (GO:0042546);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: actin nucleation (GO:0045010);; Biological Process: meiotic chromosome segregation (GO:0045132);; Biological Process: regulation of cell differentiation (GO:0045595);; Biological Process: positive regulation of cell differentiation (GO:0045597);; Biological Process: determination of dorsal identity (GO:0048263);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: cotyledon development (GO:0048825);; Biological Process: response to freezing (GO:0050826);; Biological Process: cell division (GO:0051301);; Biological Process: cell wall organization (GO:0071555);; Biological Process: integument development (GO:0080060);; ","K09338|0|brp:103865350|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein ATHB-14","--","--","--","START domain;; MEKHLA domain;; Homeobox domain","Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana OX=3702 GN=ATHB-14 PE=1 SV=1","K","Transcription","PREDICTED: homeobox-leucine zipper protein ATHB-14 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: biological adhesion (GO:0022610);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179)"]
["Bra040648","Bra040648",0.10111,16,0.06937,11,0.09722,15,0.474115,53,0.4876,53,0.940406,102,0.000320953174649558,2.124950015257,"up","[K]","Transcription","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to cold (GO:0009409);; Biological Process: response to bacterium (GO:0009617);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: response to chitin (GO:0010200);; Biological Process: defense response signaling pathway, resistance gene-independent (GO:0010204);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: membrane (GO:0016020);; Biological Process: cell growth (GO:0016049);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cell differentiation (GO:0030154);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: signaling receptor activity (GO:0038023);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism transport (GO:0044765);; Biological Process: stamen development (GO:0048443);; Biological Process: meristem development (GO:0048507);; Biological Process: developmental growth (GO:0048589);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cell division (GO:0051301);; Biological Process: cell wall organization (GO:0071555);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; DnaJ domain;; Leucine Rich Repeat;; Leucine Rich repeat","Receptor-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=RLP12 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","BnaAnng02580D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: growth (GO:0040007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; cellular component: organelle (GO:0043226);; biological process: reproductive process (GO:0022414)"]
["Bra010396","Bra010396",97.323067,1190,105.100426,1297,100.840462,1141,85.651611,741,32.920269,275,42.11285,353,0.00115305202648226,-1.42457832657593,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103834795 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028850","Bra028850",0.349125,20,0.586464,33,0.224703,12,1.106799,44,3.17536,120,2.2921,88,0.00957786774518354,1.76646558939075,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC106327579 [Brassica oleracea var. oleracea] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra011555","Bra011555",1.38146,180,4.068374,535,2.930454,353,0.130887,13,0,0,0,0,{"v":2.95936302269479e-06,"d":"2.96E-06"},-4.82967227893568,"down","[E]","Amino acid transport and metabolism","Cellular Component: nucleus (GO:0005634);; Biological Process: arginine catabolic process (GO:0006527);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: spermidine biosynthetic process (GO:0008295);; Molecular Function: arginine decarboxylase activity (GO:0008792);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: putrescine biosynthetic process (GO:0009446);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: seed development (GO:0048316);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","Pyridoxal-dependent decarboxylase, pyridoxal binding domain","Arginine decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=ADC2 PE=1 SV=1","E","Amino acid transport and metabolism","arginine decarboxylase 2-like [Brassica napus] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra025469","Bra025469",5.268107,711,11.67934,1741,11.536758,1667,0.660147,84,0.692753,47,1.050599,54,{"v":5.18727233181893e-19,"d":"5.19E-19"},-4.37650584750211,"down","--","--","Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: ATP binding (GO:0005524);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; ","--","--","[T]","Signal transduction mechanisms","--","--","T","Signal transduction mechanisms","uncharacterized protein LOC106446316 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra005027","Bra005027",26.918086,2887,44.633816,4754,45.679406,4625,33.237393,2718,14.233628,1076,13.728637,1088,0.00662342163305538,-1.36352690916945,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana OX=3702 GN=BIK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase BIK1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra021408","Bra021408",48.022937,6007,74.220252,9868,73.82376,8934,21.044382,1875,12.863786,1112,10.530938,927,{"v":1.15405395830776e-11,"d":"1.15E-11"},-2.67426235462641,"down","[K]","Transcription","Biological Process: polysaccharide catabolic process (GO:0000272);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Biological Process: gene expression (GO:0010467);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: oxidoreductase activity (GO:0016491);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: cell wall modification (GO:0042545);; Biological Process: amino acid import (GO:0043090);; Cellular Component: apical part of cell (GO:0045177);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: root hair elongation (GO:0048767);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; Biological Process: positive regulation of secondary growth (GO:2000605);; ","--","--","--","--","Protein kinase domain;; Protein tyrosine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain","Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana OX=3702 GN=At3g02880 PE=1 SV=1","--","--","PREDICTED: probable inactive receptor kinase At3g02880 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991)"]
["Bra037461","Bra037461",100.173943,2702,87.557724,2383,76.960915,1920,223.509201,4265,324.488525,5960,301.295227,5568,{"v":1.73653085974697e-07,"d":"1.74E-07"},1.12635620668524,"up","[CI]","Energy production and conversion;; Lipid transport and metabolism","Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuole (GO:0005773);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: nitric oxide biosynthetic process (GO:0006809);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Molecular Function: nitrate reductase (NADH) activity (GO:0009703);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: heme binding (GO:0020037);; Biological Process: electron transport chain (GO:0022900);; Biological Process: nitrate assimilation (GO:0042128);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: alkane biosynthetic process (GO:0043447);; Biological Process: cellular lipid catabolic process (GO:0044242);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: root hair elongation (GO:0048767);; ","--","--","[C]","Energy production and conversion","Cytochrome b5-like Heme/Steroid binding domain","Cytochrome B5 isoform D OS=Arabidopsis thaliana OX=3702 GN=CYTB5-D PE=1 SV=1","CI","Energy production and conversion;; Lipid transport and metabolism","PREDICTED: cytochrome B5 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra019434","Bra019434",7.114867,352,9.498753,484,12.729318,598,6.918547,259,6.313325,191,4.158709,157,0.00198903958230286,-1.29173395781711,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; ","--","--","--","--","--","--","--","--","uncharacterized protein LOC106351745 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007)"]
["Bra028493","Bra028493",6.382215,395,6.510771,459,7.364937,497,15.32348,863,19.092997,1163,17.60585,1278,0.000103773142164192,1.20327374249314,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: postreplication repair (GO:0006301);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: protein targeting (GO:0006605);; Biological Process: response to heat (GO:0009408);; Biological Process: UV protection (GO:0009650);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: endosperm development (GO:0009960);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to iron ion (GO:0010039);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: cytosolic transport (GO:0016482);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: UBC13-MMS2 complex (GO:0031372);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: histone H2B ubiquitination (GO:0033523);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: establishment of protein localization to organelle (GO:0072594);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K10576|1.2203e-113|brp:103850216|K10576 ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23] | (RefSeq) ubiquitin-conjugating enzyme E2 4-like","Ubiquitin mediated proteolysis (ko04120)","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin-conjugating enzyme","Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra032845","Bra032845",225.565033,10066,368.072357,16575,359.055939,14822,160.824982,5077,115.810562,3520,110.442451,3377,{"v":9.41922921927711e-08,"d":"9.42E-08"},-1.83699585160901,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: photoprotection (GO:0010117);; Biological Process: response to chitin (GO:0010200);; Biological Process: photosynthesis (GO:0015979);; Biological Process: multicellular organism growth (GO:0035264);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: phosphate ion homeostasis (GO:0055062);; Biological Process: regulation of root development (GO:2000280);; ","--","--","[R]","General function prediction only","C2H2-type zinc finger;; C2H2-type zinc finger;; Zinc-finger double-stranded RNA-binding;; Zinc-finger of C2H2 type","Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger protein ZAT10-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra018177","Bra018177",13.887512,1641,16.376781,1953,13.602812,1487,7.422112,621,11.93329,961,10.930292,885,0.000170903738611999,-1.07964514002725,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: iron ion transport (GO:0006826);; Molecular Function: beta-glucosidase activity (GO:0008422);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; ","K05349|0|brp:103873275|K05349 beta-glucosidase [EC:3.2.1.21] | (RefSeq) beta-glucosidase BoGH3B","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","--","--","Glycosyl hydrolase family 3 N terminal domain;; Glycosyl hydrolase family 3 C-terminal domain","Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: uncharacterized protein LOC103873275 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra031555","Bra031555",58.814584,4927,64.234568,5119,46.988043,3503,34.305019,2263,23.73762,1787,16.084877,1355,{"v":6.02218590632643e-07,"d":"6.02E-07"},-1.35433931320508,"down","--","--","Biological Process: protein import into nucleus, translocation (GO:0000060);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: RNA processing (GO:0006396);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein phosphorylation (GO:0006468);; Molecular Function: Ran GTPase binding (GO:0008536);; ","K15306|1.09073e-105|bna:106420149|K15306 Ran-binding protein 1 | (RefSeq) ran-binding protein 1 homolog a-like","--","[U]","Intracellular trafficking, secretion, and vesicular transport","RanBP1 domain;; WH1 domain","Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: ran-binding protein 1 homolog a-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra029188","Bra029188",0,0,0,0,0,0,2.992336,91,12.764469,378,11.043233,323,{"v":4.30621354300728e-16,"d":"4.31E-16"},7.67900078663461,"up","[H]","Coenzyme transport and metabolism","Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729);; Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast (GO:0009507);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: transcription from plastid promoter (GO:0042793);; ","--","--","--","--","Pterin 4 alpha carbinolamine dehydratase","Probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATP1 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103857201 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra009724","Bra009724",1.954836,259,4.17875,552,4.268835,531,0.395604,51,0.827474,102,1.777904,161,0.000521216814165615,-2.05320600074652,"down","[V]","Defense mechanisms","Molecular Function: transporter activity (GO:0005215);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: purine nucleobase transport (GO:0006863);; Biological Process: cellular ion homeostasis (GO:0006873);; Molecular Function: voltage-gated anion channel activity (GO:0008308);; Biological Process: response to humidity (GO:0009270);; Biological Process: phenylpropanoid metabolic process (GO:0009698);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to carbon dioxide (GO:0010037);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to ozone (GO:0010193);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: multicellular organismal water homeostasis (GO:0050891);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: stomatal closure (GO:0090332);; ","--","--","--","--","Voltage-dependent anion channel","S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: S-type anion channel SLAH3 [Brassica rapa]","molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501)"]
["Bra003195","Bra003195",18.212225,3358,75.0568,13903,75.253917,12815,0.211328,28,0.205782,26,0.032877,5,{"v":3.1752935926074e-34,"d":"3.18E-34"},-8.25428976496074,"down","[P]","Inorganic ion transport and metabolism","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: potassium ion transport (GO:0006813);; Biological Process: pollen development (GO:0009555);; Molecular Function: potassium:sodium symporter activity (GO:0009674);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: potassium ion transmembrane transport (GO:0071805);; ","K03549|0|brp:103829994|K03549 KUP system potassium uptake protein | (RefSeq) potassium transporter 5","--","--","--","K+ potassium transporter","Potassium transporter 5 OS=Arabidopsis thaliana OX=3702 GN=POT5 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: potassium transporter 5 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215)"]
["Bra003789","Bra003789",12.695858,1404,20.02341,2233,20.488574,2095,10.006597,782,8.224509,621,8.462614,647,{"v":2.99330370495743e-06,"d":"2.99E-06"},-1.53675262737594,"down","[HQ]","Coenzyme transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: catalytic activity (GO:0003824);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Molecular Function: isochorismate synthase activity (GO:0008909);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to hormone (GO:0009725);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: phylloquinone biosynthetic process (GO:0042372);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: system development (GO:0048731);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K02552|0|brp:103830688|K02552 menaquinone-specific isochorismate synthase [EC:5.4.4.2] | (RefSeq) isochorismate synthase 1, chloroplastic","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130)","[E]","Amino acid transport and metabolism","chorismate binding enzyme","Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2","H","Coenzyme transport and metabolism","PREDICTED: isochorismate synthase 1, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704)"]
["Bra025095","Bra025095",27.467914,2138,56.560311,4405,59.510655,4286,6.548849,362,2.607815,136,2.361465,127,{"v":7.01029305462496e-14,"d":"7.01E-14"},-3.99709699948916,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: chloroplast (GO:0009507);; Biological Process: ethylene biosynthetic process (GO:0009693);; Molecular Function: carbohydrate binding (GO:0030246);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","--","--","TIR domain;; TIR domain","Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana OX=3702 GN=PP2A6 PE=2 SV=1","--","--","PREDICTED: protein PHLOEM PROTEIN 2-LIKE A6 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)"]
["Bra035897","Bra035897",2.908124,113,2.336253,92,1.696219,61,56.974838,1564,73.353096,1939,70.329079,1870,{"v":3.20253854964166e-68,"d":"3.20E-68"},4.25937093919755,"up","--","--","Biological Process: response to stress (GO:0006950);; Biological Process: metabolic process (GO:0008152);; Cellular Component: membrane (GO:0016020);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism transport (GO:0044765);; Molecular Function: pectinesterase inhibitor activity (GO:0046910);; Biological Process: regulation of biological process (GO:0050789);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Plant invertase/pectin methylesterase inhibitor","21 kDa protein OS=Daucus carota OX=4039 PE=2 SV=1","S","Function unknown","PREDICTED: 21 kDa protein-like [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: enzyme regulator activity (GO:0030234)"]
["Bra020044","Bra020044",0.727917,96,1.680636,216,1.625985,194,0,0,0,0,0,0,{"v":2.41757379038891e-15,"d":"2.42E-15"},-7.43062319523033,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: anion transport (GO:0006820);; Molecular Function: mechanically-gated ion channel activity (GO:0008381);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: detection of mechanical stimulus (GO:0050982);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: response to karrikin (GO:0080167);; ","--","--","[M]","Cell wall/membrane/envelope biogenesis","Mechanosensitive ion channel","Mechanosensitive ion channel protein 9 OS=Arabidopsis thaliana OX=3702 GN=MSL9 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: mechanosensitive ion channel protein 9 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896)"]
["Bra022804","Bra022804",13.301199,1089,22.259754,1817,26.18692,2030,10.327694,635,1.366962,104,2.541489,152,0.000719207976589295,-2.35644262920488,"down","--","--","Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","--","--","KIP1-like protein","Protein NETWORKED 4B OS=Arabidopsis thaliana OX=3702 GN=NET4B PE=2 SV=1","S","Function unknown","protein NETWORKED 4B-like [Brassica napus] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra031608","Bra031608",3.146301,162,1.713997,89,1.537468,76,7.798145,286,7.459383,275,11.268918,398,{"v":6.50474081948327e-05,"d":"6.50E-05"},1.50226141403472,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: negative regulation of seed germination (GO:0010187);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Biological Process: regulation of gene expression (GO:0010468);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; ","--","--","[K]","Transcription","GATA zinc finger","GATA transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=GATA11 PE=2 SV=1","K","Transcription","PREDICTED: GATA transcription factor 11-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra027567","Bra027567",11.08737,789,18.101141,1232,19.149377,1219,4.856664,301,8.397232,571,6.747604,523,0.00320661500484974,-1.25508848933453,"down","[R]","General function prediction only","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: metabolic process (GO:0008152);; Molecular Function: Mo-molybdopterin cofactor sulfurase activity (GO:0008265);; Cellular Component: chloroplast (GO:0009507);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Molecular Function: molybdenum ion binding (GO:0030151);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[R]","General function prediction only","MOSC N-terminal beta barrel domain;; MOSC domain","Molybdenum cofactor sulfurase OS=Arabidopsis thaliana OX=3702 GN=ABA3 PE=1 SV=1","S","Function unknown","PREDICTED: mitochondrial amidoxime reducing component 2-like [Brassica rapa] ","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra019255","Bra019255",25.699275,4512,34.407357,6181,32.853245,5464,13.146072,1644,9.805514,1210,11.663878,1823,{"v":3.64054660953916e-10,"d":"3.64E-10"},-1.83187521230331,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: floral organ development (GO:0048437);; Biological Process: phyllome development (GO:0048827);; ","--","--","--","--","Auxin response factor;; B3 DNA binding domain;; AUX/IAA family","Auxin response factor 9 OS=Arabidopsis thaliana OX=3702 GN=ARF9 PE=1 SV=1","K","Transcription","PREDICTED: auxin response factor 9 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra023294","Bra023294",1322.327148,20011,2288.429199,34947,2139.178711,29947,582.267029,6234,351.174652,3620,389.022827,4034,{"v":1.09196362885803e-12,"d":"1.09E-12"},-2.63189712259484,"down","--","--","Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103840133 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra024333","Bra024333",84.512926,7903,295.618609,27970,262.289327,22575,29.020329,1925,9.990686,631,11.868116,778,{"v":4.99484120251898e-11,"d":"4.99E-11"},-3.96133019361536,"down","[S]","Function unknown","Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: caveola (GO:0005901);; Biological Process: endocytosis (GO:0006897);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: nodulation (GO:0009877);; Biological Process: response to chitin (GO:0010200);; Biological Process: membrane invagination (GO:0010324);; Cellular Component: apical plasma membrane (GO:0016324);; Biological Process: root development (GO:0048364);; Biological Process: induction of tumor, nodule, or growth in other organism involved in symbiotic interaction (GO:0051819);; Biological Process: cellular response to hypoxia (GO:0071456);; ","K07192|0|brp:103873914|K07192 flotillin | (RefSeq) flotillin-like protein 3","--","[UZ]","Intracellular trafficking, secretion, and vesicular transport;; Cytoskeleton","SPFH domain / Band 7 family","Flotillin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FLOT3 PE=2 SV=1","S","Function unknown","PREDICTED: flotillin-like protein 3 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra026679","Bra026679",1.739692,109,3.050003,158,2.645076,106,0.749509,24,0,0,0.508365,15,0.00543735943844615,-2.71471160324671,"down","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: glutathione transferase activity (GO:0004364);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to herbicide (GO:0009635);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Molecular Function: enzyme binding (GO:0019899);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Molecular Function: glutathione binding (GO:0043295);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; Biological Process: response to karrikin (GO:0080167);; Biological Process: regulation of response to red or far red light (GO:2000030);; ","K00799|2.93724e-151|brp:103842803|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase U25-like","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain","Glutathione S-transferase U25 OS=Arabidopsis thaliana OX=3702 GN=GSTU25 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase U25-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra041014","Bra041014",50.42181,5294,153.068708,16759,149.541349,14657,56.510251,4200,7.034776,500,9.605865,614,0.00151828537553582,-2.56677334732551,"down","--","--","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: syncytium formation (GO:0006949);; Biological Process: inositol catabolic process (GO:0019310);; Biological Process: L-ascorbic acid biosynthetic process (GO:0019853);; Molecular Function: inositol oxygenase activity (GO:0050113);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00469|0|brp:103849851|K00469 inositol oxygenase [EC:1.13.99.1] | (RefSeq) inositol oxygenase 4","Ascorbate and aldarate metabolism (ko00053);; Inositol phosphate metabolism (ko00562)","[R]","General function prediction only","Myo-inositol oxygenase","Inositol oxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=MIOX4 PE=2 SV=1","S","Function unknown","PREDICTED: inositol oxygenase 4 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra007100","Bra007100",1.939504,177,4.24471,378,3.484679,274,20.365518,1313,14.716889,996,12.894931,870,{"v":1.46706786561191e-05,"d":"1.47E-05"},1.80019790667264,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: protein binding (GO:0005515);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to fructose (GO:0009750);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: water channel activity (GO:0015250);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cellular cation homeostasis (GO:0030003);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root hair elongation (GO:0048767);; Biological Process: hydrogen peroxide transmembrane transport (GO:0080170);; ","K09872|0|brp:103841383|K09872 aquaporin PIP | (RefSeq) probable aquaporin PIP2-5","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Probable aquaporin PIP2-5 OS=Arabidopsis thaliana OX=3702 GN=PIP2-5 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable aquaporin PIP2-5 [Brassica oleracea var. oleracea] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra008719","Bra008719",34.282861,3796,101.348383,11377,129.578141,13165,45.271124,3503,29.349235,2220,26.870749,2078,0.000696467819313534,-1.87775117127396,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cation transport (GO:0006812);; Biological Process: anion transport (GO:0006820);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to absence of light (GO:0009646);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of defense response to virus by host (GO:0050691);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: nitrogen compound transport (GO:0071705);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 72 OS=Arabidopsis thaliana OX=3702 GN=WRKY72 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 72 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra029185","Bra029185",2.117352,170,2.408756,184,3.106498,197,5.434657,341,6.865742,342,9.48994,502,0.00220266012079478,1.02266643246541,"up","--","--","Biological Process: mitotic G2 phase (GO:0000085);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: protein methyltransferase activity (GO:0008276);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: protein deneddylation (GO:0010388);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: histone methylation (GO:0016571);; Biological Process: protein deubiquitination (GO:0016579);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K15190|0|brp:103857196|K15190 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] | (RefSeq) probable RNA methyltransferase At5g51130","--","[R]","General function prediction only","Bicoid-interacting protein 3 (Bin3);; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Ribosomal protein L11 methyltransferase (PrmA)","Probable RNA methyltransferase At5g51130 OS=Arabidopsis thaliana OX=3702 GN=At5g51130 PE=2 SV=1","S","Function unknown","PREDICTED: probable RNA methyltransferase At5g51130 [Brassica rapa]","biological process: biological phase (GO:0044848);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra018002","Bra018002",1.453748,170,1.605341,184,1.670671,174,5.41007,445,5.84269,452,6.748669,511,{"v":7.29029224461458e-09,"d":"7.29E-09"},1.34505859599662,"up","[K]","Transcription","Cellular Component: protein complex (GO:0043234);; Cellular Component: intracellular part (GO:0044424);; ","K14829|0|bna:106397229|K14829 pre-rRNA-processing protein IPI3 | (RefSeq) protein ROOT INITIATION DEFECTIVE 3-like","--","[R]","General function prediction only","WD domain, G-beta repeat;; Anaphase-promoting complex subunit 4 WD40 domain","Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1","S","Function unknown","PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Brassica oleracea var. oleracea]","cellular component: macromolecular complex (GO:0032991);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra031590","Bra031590",231.313759,6270,134.005761,3674,115.882296,2871,431.296707,8208,507.360992,9322,539.809013,9938,0.000167480131449009,1.07488709028228,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: RNA methylation (GO:0001510);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: cytosolic small ribosomal subunit (GO:0022627);; Biological Process: cell wall modification (GO:0042545);; ","K02957|2.01218e-90|eus:EUTSA_v10015007mg|K02957 small subunit ribosomal protein S15Ae | (RefSeq) hypothetical protein","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein S8","40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2","J","Translation, ribosomal structure and biogenesis","ribosomal protein S15A [Arabidopsis thaliana] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: cell junction (GO:0030054);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: macromolecular complex (GO:0032991)"]
["Bra027487","Bra027487",14.025284,1421,49.055016,5014,49.601509,4647,5.46219,392,2.993644,207,2.422676,169,{"v":1.30106496776463e-10,"d":"1.30E-10"},-3.72392044744741,"down","[GEPR]","Carbohydrate transport and metabolism;; Amino acid transport and metabolism;; Inorganic ion transport and metabolism;; General function prediction only","Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);; Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphate ion transport (GO:0006817);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abscisic acid (GO:0009737);; Molecular Function: phosphate ion transmembrane transporter activity (GO:0015114);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: transmembrane transport (GO:0055085);; Molecular Function: arsenate ion transmembrane transporter activity (GO:1901683);; Biological Process: arsenate ion transmembrane transport (GO:1901684);; ","K08176|0|brp:103839244|K08176 MFS transporter, PHS family, inorganic phosphate transporter | (RefSeq) probable inorganic phosphate transporter 1-3","--","[P]","Inorganic ion transport and metabolism","Sugar (and other) transporter;; Major Facilitator Superfamily","Probable inorganic phosphate transporter 1-3 OS=Arabidopsis thaliana OX=3702 GN=PHT1-3 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable inorganic phosphate transporter 1-3 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425)"]
["Bra025049","Bra025049",1.200139,213,0.997369,182,1.140528,191,0.363033,47,0.065996,9,0.272223,33,{"v":2.04911520674967e-05,"d":"2.05E-05"},-2.59477324183371,"down","[T]","Signal transduction mechanisms","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cell adhesion (GO:0007155);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Cellular Component: chloroplast (GO:0009507);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: gene expression (GO:0010467);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cell growth (GO:0016049);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: response to chemical (GO:0042221);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: actin nucleation (GO:0045010);; Biological Process: gametophyte development (GO:0048229);; Biological Process: seed development (GO:0048316);; Biological Process: stamen development (GO:0048443);; Biological Process: meristem development (GO:0048507);; Biological Process: lateral root development (GO:0048527);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Biological Process: cell wall organization (GO:0071555);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Leucine rich repeat N-terminal domain","Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: protein MALE DISCOVERER 1-like isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: biological adhesion (GO:0022610);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra023158","Bra023158",3.761793,381,8.182977,774,10.463115,980,0.521035,40,0.079174,6,0.757786,37,{"v":2.16902978136027e-10,"d":"2.17E-10"},-4.36450694930174,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Cellular Component: plastid (GO:0009536);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: inorganic anion transport (GO:0015698);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: lateral root development (GO:0048527);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; ","--","--","--","--","--","Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=1","S","Function unknown","PREDICTED: transcription factor bHLH111 isoform X2 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular process (GO:0009987)"]
["Bra036258","Bra036258",0.865007,39,0.451346,21,0.190101,9,5.279531,167,7.903864,234,8.280583,245,{"v":8.35940215848229e-09,"d":"8.36E-09"},3.06925416955225,"up","--","--","Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response, incompatible interaction (GO:0009814);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: positive regulation of catalytic activity (GO:0043085);; ","--","--","--","--","--","Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g02530 PE=1 SV=3","S","Function unknown","PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra018995","Bra018995",0.128789,12,0.496635,30,0.166693,22,4.381522,243,5.006379,359,6.084737,412,{"v":5.80705532935295e-14,"d":"5.81E-14"},3.73209716576213,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Cellular Component: integral component of membrane (GO:0016021);; ","K13348|0|brp:103871177|K13348 protein Mpv17 | (RefSeq) uncharacterized LOC103871177","Peroxisome (ko04146)","[R]","General function prediction only","Mpv17 / PMP22 family","--","S","Function unknown","BnaA06g01790D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra018648","Bra018648",5.835916,236,3.181086,130,5.234321,196,1.78054,51,0.700232,20,0.942217,27,{"v":1.32042777220636e-06,"d":"1.32E-06"},-2.45235991120768,"down","--","--","--","--","--","--","--","Late embryogenesis abundant protein","Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At1g08160-like [Brassica rapa]","--"]
["Bra004720","Bra004720",11.862984,1190,12.573566,1274,12.619568,1165,36.377908,2581,65.599465,4444,67.01028,4584,{"v":3.31272481816481e-07,"d":"3.31E-07"},1.59693107886866,"up","[C]","Energy production and conversion","Molecular Function: citrate (Si)-synthase activity (GO:0004108);; Cellular Component: cytosol (GO:0005829);; Biological Process: glyoxylate cycle (GO:0006097);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: peroxisome organization (GO:0007031);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: glyoxysome (GO:0009514);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; ","K01647|0|brp:103866666|K01647 citrate synthase [EC:2.3.3.1] | (RefSeq) citrate synthase 3, peroxisomal","Citrate cycle (TCA cycle) (ko00020);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[C]","Energy production and conversion","Citrate synthase, C-terminal domain","Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=CSY3 PE=2 SV=1","C","Energy production and conversion","PREDICTED: citrate synthase 3, peroxisomal [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra022262","Bra022262",1.380022,97,1.303149,87,1.610111,103,3.667684,166,4.079871,203,4.664662,239,0.00303758165822183,1.00775859606756,"up","--","--","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: pentose-phosphate shunt (GO:0006098);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: cytochrome b6f complex assembly (GO:0010190);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: positive regulation of catalytic activity (GO:0043085);; ","--","--","--","--","Protein of unknown function (DUF3007)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103869630 isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra007580","Bra007580",30.209797,2146,44.938977,3207,42.030817,2744,23.915553,1185,20.139208,973,18.688126,916,{"v":8.51363375833644e-07,"d":"8.51E-07"},-1.45039765958199,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: embryo development (GO:0009790);; Biological Process: response to chitin (GO:0010200);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cell division (GO:0051301);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704)"]
["Bra011016","Bra011016",15.355906,1842,7.032851,895,6.448839,753,4.017259,343,3.399575,265,3.309501,259,{"v":3.11820888089149e-08,"d":"3.12E-08"},-1.96988170877898,"down","--","--","Biological Process: response to molecule of fungal origin (GO:0002238);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: long-chain fatty acid biosynthetic process (GO:0042759);; Biological Process: very long-chain fatty acid biosynthetic process (GO:0042761);; Cellular Component: membrane part (GO:0044425);; Biological Process: sphingoid biosynthetic process (GO:0046520);; Molecular Function: sphingosine N-acyltransferase activity (GO:0050291);; ","K04710|0|brp:103835478|K04710 ceramide synthetase [EC:2.3.1.24] | (RefSeq) ASC1-like protein","Sphingolipid metabolism (ko00600)","[U]","Intracellular trafficking, secretion, and vesicular transport","TLC domain","ASC1-like protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","BnaA08g19650D [Brassica napus]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)"]
["Bra032918","Bra032918",15.971456,1459,39.588751,3656,36.028104,3072,10.347337,681,12.962819,842,10.95541,688,{"v":1.78428152123535e-05,"d":"1.78E-05"},-1.91516653083273,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to wounding (GO:0009611);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: phenylpropanoid biosynthetic process (GO:0009699);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Molecular Function: N-acyltransferase activity (GO:0016410);; Molecular Function: O-acetyltransferase activity (GO:0016413);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: external encapsulating structure organization (GO:0045229);; Molecular Function: 10-deacetylbaccatin III 10-O-acetyltransferase activity (GO:0050643);; Molecular Function: hydroxycinnamoyltransferase activity (GO:0050734);; Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","Transferase family","Spermidine sinapoyl-CoA acyltransferase OS=Arabidopsis thaliana OX=3702 GN=SDT PE=1 SV=1","S","Function unknown","PREDICTED: spermidine coumaroyl-CoA acyltransferase [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra011194","Bra011194",130.694839,10903,62.76305,5284,56.761433,4381,67.746964,3999,52.724075,2996,49.313465,2820,0.00348153109223532,-1.04943311911194,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: protein binding (GO:0005515);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: nucleotide-sugar metabolic process (GO:0009225);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: UDP-glucuronate 4-epimerase activity (GO:0050378);; Molecular Function: UDP-glucuronate 5'-epimerase activity (GO:0050379);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: cellular component organization or biogenesis (GO:0071840);; ","K08679|0|brp:103852660|K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] | (RefSeq) UDP-glucuronate 4-epimerase 1","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; RmlD substrate binding domain;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; Polysaccharide biosynthesis protein;; Male sterility protein","UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=GAE1 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-glucuronate 4-epimerase 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra035642","Bra035642",2.136195,90,4.499261,216,5.893682,238,0.41071,14,0.754201,23,0.584402,20,{"v":1.91590217442466e-07,"d":"1.92E-07"},-3.13484919837058,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103851794 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra032409","Bra032409",47.997084,5329,40.957955,4581,41.787514,4274,33.893581,2659,26.412696,1997,27.273214,2075,{"v":9.32686649291672e-11,"d":"9.33E-11"},-1.11738922054479,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: galactose metabolic process (GO:0006012);; Biological Process: nucleotide-sugar metabolic process (GO:0009225);; Biological Process: pollen development (GO:0009555);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: xyloglucan biosynthetic process (GO:0009969);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: rhamnogalacturonan I biosynthetic process (GO:0010246);; Biological Process: rhamnogalacturonan II biosynthetic process (GO:0010306);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: arabinose biosynthetic process (GO:0019567);; Cellular Component: Golgi cisterna membrane (GO:0032580);; Biological Process: UDP-L-arabinose biosynthetic process (GO:0033358);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: capsule polysaccharide biosynthetic process (GO:0045227);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: pollen tube development (GO:0048868);; Molecular Function: UDP-arabinose 4-epimerase activity (GO:0050373);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: defense response by callose deposition (GO:0052542);; ","K12448|0|brp:103840373|K12448 UDP-arabinose 4-epimerase [EC:5.1.3.5] | (RefSeq) UDP-arabinose 4-epimerase 1","Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; Polysaccharide biosynthesis protein;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; RmlD substrate binding domain;; NAD(P)H-binding;; Male sterility protein","UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=MUR4 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-arabinose 4-epimerase 1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179)"]
["Bra039681","Bra039681",2.524649,412,1.975847,315,2.606923,391,6.533918,750,7.753164,757,9.268311,1034,{"v":3.00958264333609e-05,"d":"3.01E-05"},1.11958922370072,"up","[R]","General function prediction only","Molecular Function: hydroxyacylglutathione hydrolase activity (GO:0004416);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to salt stress (GO:0009651);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: endosperm development (GO:0009960);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; Molecular Function: glutathione thiolesterase activity (GO:0047951);; Molecular Function: sulfur dioxygenase activity (GO:0050313);; Biological Process: oxidation-reduction process (GO:0055114);; ","K17725|5.71849e-168|brp:103871118|K17725 sulfur dioxygenase [EC:1.13.11.18] | (RefSeq) persulfide dioxygenase ETHE1 homolog, mitochondrial","Sulfur metabolism (ko00920)","[R]","General function prediction only","Metallo-beta-lactamase superfamily","Persulfide dioxygenase ETHE1 homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GLY3 PE=1 SV=3","S","Function unknown","PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)"]
["Bra039752","Bra039752",42.504528,3489,63.700188,5276,51.62191,3919,34.275959,1990,26.687971,1492,22.590681,1271,{"v":3.7180384112375e-06,"d":"3.72E-06"},-1.46140459737834,"down","[T]","Signal transduction mechanisms","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: response to chitin (GO:0010200);; Biological Process: programmed cell death (GO:0012501);; Biological Process: proline transport (GO:0015824);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: ligase activity (GO:0016874);; Biological Process: intracellular signal transduction (GO:0035556);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: regulation of response to stimulus (GO:0048583);; ","--","--","--","--","U-box domain","U-box domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=PUB20 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: U-box domain-containing protein 20 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra001254","Bra001254",5.873827,176,24.441509,737,18.296865,506,1.274209,27,0.965692,20,0.10495,3,{"v":1.79012430721245e-08,"d":"1.79E-08"},-4.35896790845985,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: root hair elongation (GO:0048767);; ","K13448|1.39962e-93|brp:103859223|K13448 calcium-binding protein CML | (RefSeq) calmodulin-like protein 3","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF hand;; EF-hand domain;; EF-hand domain pair;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region;; Cytoskeletal-regulatory complex EF hand","Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calmodulin-like protein 3 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra033678","Bra033678",20.459584,1796,17.708022,1443,16.759334,1271,5.565429,342,5.085034,312,3.862289,222,{"v":1.04793500550216e-24,"d":"1.05E-24"},-2.3810744504209,"down","[T]","Signal transduction mechanisms","Cellular Component: protein phosphatase type 1 complex (GO:0000164);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Cellular Component: chloroplast (GO:0009507);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to chitin (GO:0010200);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; ","K06269|0|brp:103827974|K06269 serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] | (RefSeq) serine/threonine-protein phosphatase PP1 isozyme 7","mRNA surveillance pathway (ko03015)","[TR]","Signal transduction mechanisms;; General function prediction only","Calcineurin-like phosphoesterase;; Serine-threonine protein phosphatase N-terminal domain","Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana OX=3702 GN=TOPP7 PE=1 SV=3","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 7 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra013255","Bra013255",2.017541,169,1.692253,151,1.119889,100,4.359646,267,6.687946,421,5.806123,342,0.000235213039051906,1.24022815093028,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: postreplication repair (GO:0006301);; Biological Process: protein targeting (GO:0006605);; Biological Process: UV protection (GO:0009650);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: endosperm development (GO:0009960);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to iron ion (GO:0010039);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: cytosolic transport (GO:0016482);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: UBC13-MMS2 complex (GO:0031372);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: histone H2B ubiquitination (GO:0033523);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: proteasome assembly (GO:0043248);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: establishment of protein localization to organelle (GO:0072594);; ","K13960|0|brp:103860238|K13960 ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23] | (RefSeq) probable ubiquitin-conjugating enzyme E2 37","--","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin-conjugating enzyme","Probable ubiquitin-conjugating enzyme E2 37 OS=Arabidopsis thaliana OX=3702 GN=UBC37 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable ubiquitin-conjugating enzyme E2 37 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra003279","Bra003279",1.216537,82,1.078362,79,0.98448,63,3.588484,181,5.849727,227,5.775191,193,{"v":2.63654749010925e-06,"d":"2.64E-06"},1.36051431426052,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting (GO:0006605);; Biological Process: signal transduction (GO:0007165);; Biological Process: pollen development (GO:0009555);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: abscission (GO:0009838);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: meristem determinacy (GO:0010022);; Biological Process: vernalization response (GO:0010048);; Biological Process: maintenance of meristem identity (GO:0010074);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: response to lipid (GO:0033993);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: single organism reproductive process (GO:0044702);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: carpel development (GO:0048440);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: negative regulation of short-day photoperiodism, flowering (GO:0048577);; Biological Process: multicellular organismal reproductive process (GO:0048609);; Biological Process: regulation of response to stress (GO:0080134);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[K]","Transcription","K-box region","Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana OX=3702 GN=AGL18 PE=1 SV=1","K","Transcription","PREDICTED: agamous-like MADS-box protein AGL18 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra018068","Bra018068",29.760208,705,21.860867,523,17.558104,385,87.705299,1469,105.397659,1699,103.976234,1687,{"v":8.44802031550906e-12,"d":"8.45E-12"},1.55117432527966,"up","--","--","--","--","--","--","--","Mitochondrial domain of unknown function (DUF1713)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873156 [Brassica rapa] ","--"]
["Bra005637","Bra005637",3.396857,396,14.085779,1584,11.191765,1192,4.387526,348,2.232142,169,2.879995,225,0.000628318380751206,-2.06881596771527,"down","--","--","Molecular Function: poly(ADP-ribose) glycohydrolase activity (GO:0004649);; Cellular Component: nucleus (GO:0005634);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: defense response to fungus (GO:0050832);; ","K07759|0|brp:103867693|K07759 poly(ADP-ribose) glycohydrolase [EC:3.2.1.143] | (RefSeq) poly(ADP-ribose) glycohydrolase 1","--","[T]","Signal transduction mechanisms","Poly (ADP-ribose) glycohydrolase (PARG)","Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=PARG2 PE=2 SV=1","S","Function unknown","PREDICTED: poly(ADP-ribose) glycohydrolase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra010220","Bra010220",35.710546,2181,38.07354,2344,38.2665,2174,33.407406,1459,11.104576,475,14.88465,651,0.0030165668613917,-1.38993781234122,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: response to heat (GO:0009408);; Biological Process: response to wounding (GO:0009611);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of defense response to virus by host (GO:0050691);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain","WRKY transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=WRKY18 PE=1 SV=2","K","Transcription","WRKY transcription factor 18-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra002322","Bra002322",22.843295,1207,36.04744,1975,30.099711,1482,4.123231,175,4.967243,185,7.666346,278,{"v":1.46329068980504e-15,"d":"1.46E-15"},-2.87163144632217,"down","--","--","Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: water transport (GO:0006833);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; ","--","--","--","--","zinc-finger of the FCS-type, C2-C2","Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103845651 isoform X1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra003299","Bra003299",6.712573,482,14.435454,1046,14.220323,945,4.983235,254,3.496694,171,3.458755,171,{"v":4.46940315039718e-06,"d":"4.47E-06"},-2.0730682053701,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular component organization (GO:0016043);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: animal organ development (GO:0048513);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Non-functional pseudokinase ZED1 OS=Arabidopsis thaliana OX=3702 GN=ZED1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: non-functional pseudokinase ZED1 [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra018932","Bra018932",31.143188,3797,13.42546,1617,13.725376,1511,9.107695,720,5.589821,438,5.808054,437,{"v":3.81466759859145e-07,"d":"3.81E-07"},-2.060597817762,"down","[R]","General function prediction only","Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; Molecular Function: metallopeptidase activity (GO:0008237);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Molecular Function: IAA-Ala conjugate hydrolase activity (GO:0010179);; Molecular Function: hippurate hydrolase activity (GO:0047980);; ","K14664|0|brp:103871257|K14664 IAA-amino acid hydrolase [EC:3.5.1.-] | (RefSeq) IAA-amino acid hydrolase ILR1-like 4","--","--","--","Peptidase family M20/M25/M40;; Peptidase dimerisation domain","IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana OX=3702 GN=ILL4 PE=1 SV=2","E","Amino acid transport and metabolism","PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra038671","Bra038671",11.06013,455,18.229385,757,18.005983,686,4.143624,121,9.134852,256,9.18182,259,0.000737879437820509,-1.59167136301988,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: innate immune response (GO:0045087);; Biological Process: defense response to virus (GO:0051607);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","Late embryogenesis abundant protein","NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1","S","Function unknown","PREDICTED: NDR1/HIN1-like protein 12 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra016029","Bra016029",0.743335,59,1.37523,104,1.87612,136,0.322206,19,0.456791,26,0.207596,12,0.000267848686090087,-2.31435591554272,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: autophagy (GO:0006914);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: response to insect (GO:0009625);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: ADP binding (GO:0043531);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain","TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1","--","--","PREDICTED: TMV resistance protein N-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra011448","Bra011448",0.928556,144,0.483616,76,0.403524,58,3.377179,316,3.363679,347,3.779778,395,{"v":5.88572741941081e-07,"d":"5.89E-07"},1.87483329194743,"up","--","--","Biological Process: cellular protein modification process (GO:0006464);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: cellular component organization or biogenesis (GO:0071840);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Stage II sporulation protein E (SpoIIE);; Protein phosphatase 2C","Probable protein phosphatase 2C 62 OS=Arabidopsis thaliana OX=3702 GN=At4g33500 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 62 isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra029996","Bra029996",3.988728,283,9.673126,692,9.350597,613,0.080925,5,0.084067,5,0,0,{"v":5.97634421114424e-22,"d":"5.98E-22"},-6.66154003942694,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: cytoplasm (GO:0005737);; Biological Process: ion transport (GO:0006811);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: hydrogen peroxide-mediated programmed cell death (GO:0010421);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Biological Process: pigment metabolic process (GO:0042440);; ","K06892|0|brp:103827881|K06892 feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-] | (RefSeq) feruloyl CoA ortho-hydroxylase 2-like","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana OX=3702 GN=F6&apos;H2 PE=1 SV=1","S","Function unknown","PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)"]
["Bra017139","Bra017139",1.866992,203,1.877889,206,1.764946,178,1.122457,87,0.552986,41,0.740363,56,{"v":3.16573731513812e-05,"d":"3.17E-05"},-1.68224209862301,"down","[DPM]","Cell cycle control, cell division, chromosome partitioning;; Inorganic ion transport and metabolism;; Cell wall/membrane/envelope biogenesis","--","K05909|0|brp:103865649|K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-4-like","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: laccase-4-like [Brassica rapa]","--"]
["Bra023283","Bra023283",3.477281,199,2.609772,151,2.504223,133,7.557207,305,9.526223,371,10.342363,405,{"v":1.77504399971687e-05,"d":"1.78E-05"},1.11536256092413,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: heme oxygenase (decyclizing) activity (GO:0004392);; Biological Process: heme oxidation (GO:0006788);; Cellular Component: chloroplast (GO:0009507);; Biological Process: phytochromobilin biosynthetic process (GO:0010024);; Biological Process: inflorescence development (GO:0010229);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: heme binding (GO:0020037);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: regulation of biological process (GO:0050789);; ","--","--","[P]","Inorganic ion transport and metabolism","Heme oxygenase","Probable inactive heme oxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HO2 PE=2 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: probable inactive heme oxygenase 2, chloroplastic [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)"]
["Bra016221","Bra016221",15.468255,805,31.310455,1643,25.632301,1233,18.331684,675,15.873211,563,15.942352,568,0.00599360384011914,-1.08314005115291,"down","--","--","--","--","--","--","--","Protein of unknown function (DUF1645)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103831573 [Brassica rapa]","--"]
["Bra031111","Bra031111",0.248593,20,0.70154,63,0.529854,100,4.067531,261,6.975496,557,7.756809,654,0.000129037365587933,2.64242891507042,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: regulation of biological process (GO:0050789);; ","--","--","--","--","--","Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH133 isoform X1 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra017800","Bra017800",14.376374,759,30.828434,1642,21.458181,1048,11.087643,414,14.197507,511,14.825196,537,0.00205793775621267,-1.27744118286655,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; ","K09419|4.48845e-146|brp:103862516|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat stress transcription factor B-1-like","--","[K]","Transcription","HSF-type DNA-binding","Heat stress transcription factor B-1 OS=Arabidopsis thaliana OX=3702 GN=HSFB1 PE=2 SV=2","K","Transcription","PREDICTED: heat stress transcription factor B-1-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; molecular function: binding (GO:0005488)"]
["Bra018784","Bra018784",3.020658,49,14.908192,331,11.149899,302,3.666824,42,4.061328,45,2.060796,23,0.0015509113066168,-2.46007722164642,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; ","--","--","[D]","Cell cycle control, cell division, chromosome partitioning","Organ specific protein","--","L","Replication, recombination and repair","PREDICTED: uncharacterized protein LOC103871415 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra024360","Bra024360",4.140288,596,8.323886,1024,6.008039,799,3.242861,326,1.291678,121,1.719665,144,{"v":5.53234675209673e-05,"d":"5.53E-05"},-2.02569368898324,"down","[R]","General function prediction only","Cellular Component: nucleus (GO:0005634);; Biological Process: response to osmotic stress (GO:0006970);; Cellular Component: chloroplast outer membrane (GO:0009707);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: small molecule biosynthetic process (GO:0044283);; Biological Process: innate immune response (GO:0045087);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[R]","General function prediction only","Tetratricopeptide repeat;; Tetratricopeptide repeat;; TPR repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Inactive TPR repeat-containing thioredoxin TTL3 OS=Arabidopsis thaliana OX=3702 GN=TTL3 PE=1 SV=2","S","Function unknown","PREDICTED: inactive TPR repeat-containing thioredoxin TTL3 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra015331","Bra015331",4.054709,307,2.670946,205,3.195555,224,9.695928,508,11.270654,576,12.582591,642,{"v":6.185999982396e-07,"d":"6.19E-07"},1.18175086755781,"up","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: RNA processing (GO:0006396);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At4g21190 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra022853","Bra022853",7.833289,437,6.591656,380,8.225391,437,37.493143,1421,22.849681,866,19.111624,765,0.000317663514702761,1.19940517423502,"up","[VI]","Defense mechanisms;; Lipid transport and metabolism","Molecular Function: glutathione peroxidase activity (GO:0004602);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: chromatin assembly or disassembly (GO:0006333);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: vesicle-mediated transport (GO:0016192);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: cellular response to water deprivation (GO:0042631);; Molecular Function: phospholipid-hydroperoxide glutathione peroxidase activity (GO:0047066);; Cellular Component: apoplast (GO:0048046);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00432|2.61894e-120|brp:103857388|K00432 glutathione peroxidase [EC:1.11.1.9] | (RefSeq) probable glutathione peroxidase 2","Glutathione metabolism (ko00480);; Arachidonic acid metabolism (ko00590)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione peroxidase;; AhpC/TSA family;; Redoxin","Probable glutathione peroxidase 2 OS=Arabidopsis thaliana OX=3702 GN=GPX2 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable glutathione peroxidase 2 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; biological process: rhythmic process (GO:0048511);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: extracellular region (GO:0005576)"]
["Bra020343","Bra020343",17.028008,1698,9.35291,942,9.23481,853,28.526924,2011,37.598309,2552,43.859441,2994,0.000577632055173918,1.08279889367786,"up","--",null,"Biological Process: phosphorelay signal transduction system (GO:0000160);; Biological Process: MAPK cascade (GO:0000165);; Biological Process: regulation of response to biotic stimulus (GO:0002831);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cell cycle (GO:0007049);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: cuticle development (GO:0042335);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: innate immune response (GO:0045087);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cell wall organization (GO:0071555);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: regulation of stem cell division (GO:2000035);; Biological Process: regulation of post-embryonic root development (GO:2000069);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase HT1-like [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra014406","Bra014406",40.975965,1492,30.211754,1099,31.802321,1061,109.466122,2728,112.63878,2710,134.50807,3266,{"v":4.5115742870493e-12,"d":"4.51E-12"},1.20966834191222,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: protein targeting (GO:0006605);; Biological Process: response to stress (GO:0006950);; Biological Process: cell proliferation (GO:0008283);; Biological Process: UV protection (GO:0009650);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: endosperm development (GO:0009960);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: cytosolic transport (GO:0016482);; Biological Process: protein deubiquitination (GO:0016579);; Biological Process: protein sumoylation (GO:0016925);; Molecular Function: SUMO transferase activity (GO:0019789);; Biological Process: cell cycle process (GO:0022402);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; Biological Process: histone H2B ubiquitination (GO:0033523);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: establishment of protein localization to organelle (GO:0072594);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K10577|2.7827e-117|brp:103862793|K10577 ubiquitin-conjugating enzyme E2 I | (RefSeq) SUMO-conjugating enzyme SCE1-like","RNA transport (ko03013);; Ubiquitin mediated proteolysis (ko04120)","[O]","Posttranslational modification, protein turnover, chaperones","Ubiquitin-conjugating enzyme","SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana OX=3702 GN=SCE1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: SUMO-conjugating enzyme SCE1-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra009406","Bra009406",3.812038,477,8.352585,1050,7.908718,914,0.715568,65,0.065846,7,0.010907,2,{"v":2.4571714837586e-06,"d":"2.46E-06"},-4.28141096736587,"down","[GI]","Carbohydrate transport and metabolism;; Lipid transport and metabolism","Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: extracellular region (GO:0005576);; Biological Process: amino acid transport (GO:0006865);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cell wall modification (GO:0042545);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; ","K01051|0|brp:103847237|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase/pectinesterase inhibitor 47","Pentose and glucuronate interconversions (ko00040);; Starch and sucrose metabolism (ko00500)","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana OX=3702 GN=PME47 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable pectinesterase/pectinesterase inhibitor 47 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896)"]
["Bra017045","Bra017045",0.75562,96,1.089946,136,0.767432,90,2.526215,224,2.962452,247,2.445881,209,0.00320409522118136,1.00250326502984,"up","--","--","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to insect (GO:0009625);; Biological Process: shade avoidance (GO:0009641);; Biological Process: jasmonic acid and ethylene-dependent systemic resistance (GO:0009861);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: stomatal movement (GO:0010118);; Biological Process: response to far red light (GO:0010218);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of circadian rhythm (GO:0042752);; Biological Process: root development (GO:0048364);; Biological Process: stamen development (GO:0048443);; Biological Process: developmental growth (GO:0048589);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","[R]","General function prediction only","--","Coronatine-insensitive protein 1 OS=Arabidopsis thaliana OX=3702 GN=COI1 PE=1 SV=1","S","Function unknown","PREDICTED: coronatine-insensitive protein 1-like isoform X1 [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007)"]
["Bra009759","Bra009759",136.730384,7417,337.633591,18462,323.648998,16377,27.919097,1066,12.815262,473,6.433239,249,{"v":1.35767547369665e-13,"d":"1.36E-13"},-4.3669215783237,"down","[G]","Carbohydrate transport and metabolism","Biological Process: defense response to oomycetes (GO:0002229);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: pentose-phosphate shunt (GO:0006098);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Molecular Function: isomerase activity (GO:0016853);; Molecular Function: 6-phosphogluconolactonase activity (GO:0017057);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to redox state (GO:0071461);; ","K01057|0|brp:103874310|K01057 6-phosphogluconolactonase [EC:3.1.1.31] | (RefSeq) probable 6-phosphogluconolactonase 4","Pentose phosphate pathway (ko00030);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase","Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana OX=3702 GN=At5g24410 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable 6-phosphogluconolactonase 4 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824)"]
["Bra029794","Bra029794",20.102184,2643,29.70582,3935,30.040911,3652,18.65784,1741,13.650502,1210,16.903109,1517,{"v":8.78849271697429e-05,"d":"8.79E-05"},-1.25241084888267,"down","[T]","Signal transduction mechanisms","Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1","T","Signal transduction mechanisms","BnaA05g28720D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra013293","Bra013293",4.563785,260,4.136997,253,4.378984,242,10.404291,401,17.092236,626,14.603416,557,0.000604890059407718,1.0041774523667,"up","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: mitochondrion (GO:0005739);; Molecular Function: transferase activity (GO:0016740);; ","K07441|5.82983e-134|brp:103856164|K07441 beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] | (RefSeq) UDP-N-acetylglucosamine transferase subunit ALG14 homolog","N-Glycan biosynthesis (ko00510)","[R]","General function prediction only","Oligosaccharide biosynthesis protein Alg14 like","--","S","Function unknown","PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra037590","Bra037590",8.670066,1254,14.498471,2072,13.00045,1767,9.288274,970,7.755949,785,7.386744,778,0.00146611385837503,-1.06742718632651,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","Plant protein of unknown function (DUF639)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103838134 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra032069","Bra032069",3.749198,313,2.4926,211,3.04675,234,8.361558,494,12.022333,695,11.294262,645,{"v":4.70039216138502e-06,"d":"4.70E-06"},1.22326076880914,"up","--","--","--","--","--","--","--","--","F-box/kelch-repeat protein At1g64840 OS=Arabidopsis thaliana OX=3702 GN=At1g64840 PE=2 SV=2","S","Function unknown","PREDICTED: F-box/kelch-repeat protein At1g64840-like [Brassica rapa] ","--"]
["Bra037386","Bra037386",13.077649,1223,17.554125,1657,16.460165,1424,4.703343,312,3.288801,210,3.061836,197,{"v":5.97015342774657e-17,"d":"5.97E-17"},-2.60720706936404,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: anion transport (GO:0006820);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to toxic substance (GO:0009636);; Biological Process: response to salt stress (GO:0009651);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: xenobiotic catabolic process (GO:0042178);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: pigment biosynthetic process (GO:0046148);; Molecular Function: coniferyl-alcohol glucosyltransferase activity (GO:0047209);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; ","K08237|0|brp:103836868|K08237 hydroquinone glucosyltransferase [EC:2.4.1.218] | (RefSeq) UDP-glycosyltransferase 72B1","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 72B1 OS=Arabidopsis thaliana OX=3702 GN=UGT72B1 PE=1 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 72B1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra008804","Bra008804",48.270896,5882,80.77151,9744,88.433562,9678,15.50403,1400,10.345094,816,9.638296,879,{"v":8.32578847684407e-16,"d":"8.33E-16"},-3.04112613767326,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: protein binding (GO:0005515);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: gravitropism (GO:0009630);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: basipetal auxin transport (GO:0010540);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Molecular Function: potassium ion antiporter activity (GO:0022821);; Biological Process: root development (GO:0048364);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: response to karrikin (GO:0080167);; Biological Process: regulation of stomatal closure (GO:0090333);; ","--","--","[R]","General function prediction only","Plasma-membrane choline transporter;; Major Facilitator Superfamily;; Sugar (and other) transporter","Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=ZIFL1 PE=2 SV=1","S","Function unknown","PREDICTED: protein PNS1-like isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: transporter activity (GO:0005215);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra027981","Bra027981",164.800873,5915,332.979218,12061,234.616638,7790,44.802689,1138,17.777546,435,13.653237,336,{"v":8.47552452951822e-12,"d":"8.48E-12"},-3.64155102963109,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Biological Process: cellular component organization (GO:0016043);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: root hair elongation (GO:0048767);; Biological Process: pollen tube development (GO:0048868);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: regulation of nitric oxide metabolic process (GO:0080164);; ","K13448|5.37089e-99|brp:103838742|K13448 calcium-binding protein CML | (RefSeq) calcium-binding protein CML37","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF-hand domain pair;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF hand;; Cytoskeletal-regulatory complex EF hand","Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=2 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: calcium-binding protein CML37 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179)"]
["Bra008540","Bra008540",62.719124,5878,70.348434,6653,64.499382,5592,15.286169,1014,17.641462,1126,16.747091,1076,{"v":7.71526033615393e-46,"d":"7.72E-46"},-2.53590085523138,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to toxic substance (GO:0009636);; Biological Process: response to salt stress (GO:0009651);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to organic cyclic compound (GO:0014070);; Biological Process: nitrate transport (GO:0015706);; Biological Process: xenobiotic catabolic process (GO:0042178);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: pigment biosynthetic process (GO:0046148);; Molecular Function: coniferyl-alcohol glucosyltransferase activity (GO:0047209);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: quercetin 3'-O-glucosyltransferase activity (GO:0080045);; Molecular Function: quercetin 4'-O-glucosyltransferase activity (GO:0080046);; ","K08237|0|brp:103853332|K08237 hydroquinone glucosyltransferase [EC:2.4.1.218] | (RefSeq) UDP-glycosyltransferase 72B1-like","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 72B1 OS=Arabidopsis thaliana OX=3702 GN=UGT72B1 PE=1 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 72B1-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra027774","Bra027774",2.398003,384,5.520095,892,5.245993,771,2.260254,216,0.488097,54,0.784852,88,{"v":9.88797921120284e-05,"d":"9.89E-05"},-2.43905851060526,"down","--","--","Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to ozone (GO:0010193);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Molecular Function: phosphatidylinositol binding (GO:0035091);; Molecular Function: ADP binding (GO:0043531);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain","Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 SV=1","--","--","PREDICTED: disease resistance protein RML1B-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)"]
["Bra036155","Bra036155",2.443729,199,2.885549,237,3.833523,289,1.093679,63,2.163402,120,1.767229,99,0.00196240282643835,-1.38845006830408,"down","[G]","Carbohydrate transport and metabolism","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Cellular Component: extracellular region (GO:0005576);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: root morphogenesis (GO:0010015);; Molecular Function: pectate lyase activity (GO:0030570);; Biological Process: growth (GO:0040007);; Biological Process: cell wall modification involved in multidimensional cell growth (GO:0042547);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: pectin catabolic process (GO:0045490);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: root hair elongation (GO:0048767);; ","K01728|0|brp:103837270|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) probable pectate lyase 20","Pentose and glucuronate interconversions (ko00040)","--","--","Pectate lyase;; Right handed beta helix region","Probable pectate lyase 20 OS=Arabidopsis thaliana OX=3702 GN=At5g48900 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable pectate lyase 20 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra029880","Bra029880",52.728527,1003,80.907623,1553,79.969841,1407,32.840992,442,11.935568,155,16.101664,210,{"v":2.13485586114061e-06,"d":"2.13E-06"},-2.28536048531251,"down","--","--","Biological Process: response to stimulus (GO:0050896);; ","--","--","--","--","--","--","S","Function unknown","BnaA05g27990D [Brassica napus]","biological process: response to stimulus (GO:0050896)"]
["Bra009365","Bra009365",1.582199,206,5.724011,751,5.259913,633,1.243298,115,0.786953,70,1.03774,93,{"v":2.87092325568463e-05,"d":"2.87E-05"},-2.46632484128728,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: intracellular (GO:0005622);; Biological Process: cellular process (GO:0009987);; Cellular Component: intracellular part (GO:0044424);; Biological Process: regulation of double fertilization forming a zygote and endosperm (GO:0080155);; ","K11968|0|brp:103847186|K11968 ariadne-1 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase ARI16","--","[O]","Posttranslational modification, protein turnover, chaperones","IBR domain, a half RING-finger domain","Probable E3 ubiquitin-protein ligase ARI16 OS=Arabidopsis thaliana OX=3702 GN=ARI16 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: probable E3 ubiquitin-protein ligase ARI16 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra023161","Bra023161",10.318072,645,11.817606,745,8.545014,494,7.346944,325,7.447615,317,6.790658,291,{"v":1.30523717156499e-05,"d":"1.31E-05"},-1.05147840441354,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Cellular Component: chloroplast (GO:0009507);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root hair elongation (GO:0048767);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: multi-organism process (GO:0051704);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103840270 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra007407","Bra007407",4.298675,246,3.532482,204,2.746497,145,2.274163,92,2.636618,103,1.767987,70,0.000473704949481689,-1.17625886949377,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","--","--","[K]","Transcription","Myb/SANT-like DNA-binding domain;; Alcohol dehydrogenase transcription factor Myb/SANT-like","Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana OX=3702 GN=ASIL2 PE=1 SV=1","K","Transcription","PREDICTED: trihelix transcription factor ASIL2-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Brassica_rapa_newGene_20782","--",2.028402,191,1.407295,134,1.801342,157,2.548534,170,48.384731,3095,48.289921,3108,{"v":5.22101808311217e-05,"d":"5.22E-05"},3.24701898926432,"up","[L]","Replication, recombination and repair","Molecular Function: nucleic acid binding (GO:0003676);; ","--","--","[R]","General function prediction only","--","Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC106423811 [Brassica napus]","molecular function: binding (GO:0005488)"]
["Bra021177","Bra021177",136.327412,7999,187.214621,11078,184.56398,10036,91.276255,3795,38.10782,1538,40.830425,1645,{"v":2.02864006434955e-06,"d":"2.03E-06"},-2.07058473250519,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: peptide receptor activity (GO:0001653);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein folding (GO:0006457);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: water transport (GO:0006833);; Biological Process: defense response (GO:0006952);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: Golgi organization (GO:0007030);; Biological Process: cell adhesion (GO:0007155);; Cellular Component: proteasome regulatory particle, base subcomplex (GO:0008540);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: photorespiration (GO:0009853);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: membrane (GO:0016020);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate catabolic process (GO:0019762);; Molecular Function: enzyme regulator activity (GO:0030234);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: stamen formation (GO:0048455);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: nitrile biosynthetic process (GO:0080028);; Biological Process: proteasome core complex assembly (GO:0080129);; ","--","--","--","--","Jacalin-like lectin domain","PYK10-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PBP2 PE=1 SV=1","S","Function unknown","PREDICTED: PYK10-binding protein 2-like [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological adhesion (GO:0022610);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; molecular function: enzyme regulator activity (GO:0030234);; biological process: growth (GO:0040007)"]
["Bra009605","Bra009605",99.789436,5546,245.549336,13743,270.195102,13967,57.269215,2267,75.686957,2843,75.765946,2872,{"v":6.28018699444191e-06,"d":"6.28E-06"},-2.08093426983578,"down","[H]","Coenzyme transport and metabolism","Biological Process: metabolic process (GO:0008152);; Molecular Function: hydrolase activity (GO:0016787);; ","K07025|0|brp:103847468|K07025 putative hydrolase of the HAD superfamily | (RefSeq) uncharacterized protein C24B11.05","--","[R]","General function prediction only","Haloacid dehalogenase-like hydrolase;; haloacid dehalogenase-like hydrolase;; HAD-hyrolase-like","--","S","Function unknown","PREDICTED: uncharacterized protein C24B11.05 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra003615","Bra003615",7.5087,993,18.388079,2540,18.092937,2287,6.004132,486,6.095175,567,4.92501,467,{"v":2.17435799368395e-05,"d":"2.17E-05"},-1.96083500049504,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: RNA processing (GO:0006396);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; ","--","--","[R]","General function prediction only","YT521-B-like domain","30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana OX=3702 GN=CPSF30 PE=1 SV=1","S","Function unknown","PREDICTED: YTH domain-containing family protein 2-like isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra005339","Bra005339",1.385827,44,1.464117,47,1.01349,30,8.11076,182,6.535003,141,6.751927,147,{"v":1.04238420446159e-07,"d":"1.04E-07"},1.87234717495697,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103867360 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra005267","Bra005267",2.824946,274,1.742621,178,1.846046,178,2.192709,145,1.020559,77,1.120389,83,0.00958915481529059,-1.05443913759794,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103867284 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra021393","Bra021393",262.374649,17168,349.186462,23132,387.015839,23490,91.952908,4315,48.376474,2237,50.824348,2315,{"v":6.14716884711455e-15,"d":"6.15E-15"},-2.85835281058569,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: response to chitin (GO:0010200);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: establishment of cell polarity (GO:0030010);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: localization (GO:0051179);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 23 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179)"]
["Bra000742","Bra000742",17.517922,1055,23.008606,1392,23.832499,1322,12.552992,533,11.936651,495,11.455535,471,{"v":1.79836570925787e-07,"d":"1.80E-07"},-1.38516649150391,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: amino acid transport (GO:0006865);; Biological Process: intracellular protein transport (GO:0006886);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: protein transporter activity (GO:0008565);; Biological Process: mRNA transcription (GO:0009299);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: gravitropism (GO:0009630);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to chitin (GO:0010200);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: cytosolic ribosome (GO:0022626);; Cellular Component: clathrin adaptor complex (GO:0030131);; Biological Process: cellulose biosynthetic process (GO:0030244);; Molecular Function: clathrin binding (GO:0030276);; Cellular Component: anchored component of membrane (GO:0031225);; Cellular Component: integral component of plastid membrane (GO:0031351);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: animal organ development (GO:0048513);; ","K16281|1.61777e-102|brp:103858600|K16281 RING-H2 zinc finger protein RHA1 | (RefSeq) E3 ubiquitin-protein ligase RHA1B-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Anaphase-promoting complex subunit 11 RING-H2 finger;; Adaptin C-terminal domain;; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra027772","Bra027772",47.428561,10652,26.088952,5764,30.992609,6422,22.007855,3567,12.964879,1991,14.67993,2299,{"v":2.23276263188934e-06,"d":"2.23E-06"},-1.53971393542401,"down","[R]","General function prediction only","Biological Process: immune system process (GO:0002376);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to virus (GO:0009615);; Biological Process: response to ozone (GO:0010193);; Cellular Component: membrane (GO:0016020);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain;; Leucine Rich Repeat","Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=4 SV=1","--","--","BnaC09g12560D [Brassica napus]","biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle part (GO:0044422)"]
["Bra035120","Bra035120",0.844888,107,1.83299,233,2.082704,242,8.331209,759,12.847725,1112,9.721778,846,{"v":1.04543036419347e-05,"d":"1.05E-05"},2.04891569657912,"up","[I]","Lipid transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Molecular Function: ent-kaurene synthase activity (GO:0009899);; Molecular Function: ent-cassa-12,15-diene synthase activity (GO:0034277);; Molecular Function: syn-pimara-7,15-diene synthase activity (GO:0034279);; Molecular Function: ent-sandaracopimaradiene synthase activity (GO:0034280);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: monoterpene biosynthetic process (GO:0043693);; Biological Process: diterpene phytoalexin metabolic process (GO:0051501);; ","K04121|0|brp:103832422|K04121 ent-kaurene synthase [EC:4.2.3.19] | (RefSeq) ent-kaur-16-ene synthase, chloroplastic","Diterpenoid biosynthesis (ko00904)","--","--","Terpene synthase family, metal binding domain;; Terpene synthase, N-terminal domain","Ent-kaur-16-ene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GA2 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: ent-kaur-16-ene synthase, chloroplastic isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra030815","Bra030815",19.958682,3945,5.113046,1039,5.340088,950,1.702872,247,1.949328,278,1.771281,244,{"v":1.46602675146114e-07,"d":"1.47E-07"},-2.7690886314614,"down","--",null,"Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: defense response (GO:0006952);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to ozone (GO:0010193);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Di-glucose binding within endoplasmic reticulum;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra003999","Bra003999",0.560122,108,0.580432,114,0.777706,138,2.588202,350,2.500246,331,3.551668,465,{"v":2.3965279694756e-06,"d":"2.40E-06"},1.57253942212839,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: endoribonuclease activity (GO:0004521);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus organizer region (GO:0005731);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: male meiotic nuclear division (GO:0007140);; Biological Process: female meiotic nuclear division (GO:0007143);; Biological Process: megagametogenesis (GO:0009561);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to auxin (GO:0009733);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: auxin metabolic process (GO:0009850);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: adaxial/abaxial pattern specification (GO:0009955);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: response to far red light (GO:0010218);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Biological Process: maintenance of shoot apical meristem identity (GO:0010492);; Biological Process: miRNA metabolic process (GO:0010586);; Biological Process: leaf proximal/distal pattern formation (GO:0010589);; Biological Process: production of lsiRNA involved in RNA interference (GO:0010599);; Cellular Component: extrinsic component of membrane (GO:0019898);; Biological Process: histone H3-K9 demethylation (GO:0033169);; Biological Process: somatic stem cell population maintenance (GO:0035019);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Molecular Function: siRNA binding (GO:0035197);; Molecular Function: miRNA binding (GO:0035198);; Biological Process: regulation of development, heterochronic (GO:0040034);; Biological Process: adventitious root development (GO:0048830);; Biological Process: microgametogenesis (GO:0055046);; Biological Process: regulation of shoot apical meristem development (GO:1902183);; ","K11593|0|brp:103830930|K11593 eukaryotic translation initiation factor 2C | (RefSeq) protein argonaute 7","--","[J]","Translation, ribosomal structure and biogenesis","Piwi domain;; N-terminal domain of argonaute;; PAZ domain;; Argonaute linker 1 domain;; Argonaute linker 2 domain","Protein argonaute 7 OS=Arabidopsis thaliana OX=3702 GN=AGO7 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: protein argonaute 7 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra000594","Bra000594",389.664409,49036,201.373586,25697,199.750117,23432,230.801031,20636,157.733171,13528,147.934118,12892,0.00177805766667766,-1.05626467438347,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Biological Process: regionalization (GO:0003002);; Cellular Component: early endosome (GO:0005769);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: water transport (GO:0006833);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: cellulase activity (GO:0008810);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: cell plate (GO:0009504);; Biological Process: response to nematode (GO:0009624);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to fructose (GO:0009750);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: cell tip growth (GO:0009932);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: cellulose catabolic process (GO:0030245);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: cortical microtubule organization (GO:0043622);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: shoot system development (GO:0048367);; Biological Process: floral organ development (GO:0048437);; Biological Process: meristem development (GO:0048507);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","Glycosyl hydrolase family 9","Endoglucanase 25 OS=Arabidopsis thaliana OX=3702 GN=KOR PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: endoglucanase 25 [Brassica rapa]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414)"]
["Bra027779","Bra027779",0.38095,80,0.27949,64,0.349676,67,0.152601,25,0.026508,5,0.080719,13,0.001638994159819,-2.15822213672232,"down","[R]","General function prediction only","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: signal transduction (GO:0007165);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to ozone (GO:0010193);; Molecular Function: purine ribonucleoside binding (GO:0032550);; Molecular Function: adenyl ribonucleotide binding (GO:0032559);; Molecular Function: phosphatidylinositol binding (GO:0035091);; Biological Process: innate immune response (GO:0045087);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: localization (GO:0051179);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","--","--","TIR domain;; NB-ARC domain;; TIR domain;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 SV=1","--","--","PREDICTED: disease resistance protein RML1B-like isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179)"]
["Bra001319","Bra001319",4.423999,97,4.092148,90,6.528544,132,0.131864,3,0.117806,2,0,0,{"v":5.13974296388505e-13,"d":"5.14E-13"},-5.3501733322064,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103859305 [Brassica rapa]","--"]
["Bra039115","Bra039115",0.813581,94,0.560989,66,0.398713,39,1.955292,145,2.652806,180,2.065609,148,0.00347551651285581,1.20036019405558,"up","[O]","Posttranslational modification, protein turnover, chaperones","Biological Process: MAPK cascade (GO:0000165);; Biological Process: protein peptidyl-prolyl isomerization (GO:0000413);; Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein folding (GO:0006457);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast thylakoid lumen (GO:0009543);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: response to chitin (GO:0010200);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD","Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP38 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra020663","Bra020663",2.37218,164,2.179026,152,1.890772,121,4.207458,206,8.153669,383,6.870821,325,0.00705796194733066,1.00345094717145,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein DDB_G0271670-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra012088","Bra012088",187.552292,11790,258.699341,16410,242.936813,14127,122.668266,5455,89.430862,3829,86.887642,3743,{"v":1.45661218655642e-09,"d":"1.46E-09"},-1.74734056289582,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: response to chitin (GO:0010200);; ","K20858|0|brp:103829582|K20858 calcium uniporter protein, mitochondrial | (RefSeq) calcium uniporter protein 3, mitochondrial-like","--","[R]","General function prediction only","Mitochondrial calcium uniporter","Calcium uniporter protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g66650 PE=2 SV=1","S","Function unknown","PREDICTED: calcium uniporter protein 3, mitochondrial-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra010658","Bra010658",10.29529,829,24.002609,1894,26.896933,1947,10.072938,551,12.395676,665,13.95475,767,0.00682607169416424,-1.28549451713802,"down","[G]","Carbohydrate transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: trehalose-phosphatase activity (GO:0004805);; Cellular Component: nucleus (GO:0005634);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to cadmium ion (GO:0046686);; ","K01087|0|brp:103835097|K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] | (RefSeq) probable trehalose-phosphate phosphatase H","Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Trehalose-phosphatase","Probable trehalose-phosphate phosphatase H OS=Arabidopsis thaliana OX=3702 GN=TPPH PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable trehalose-phosphate phosphatase H isoform X1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra039454","Bra039454",9.511271,715,5.844137,443,5.464876,380,0.561749,30,2.062667,106,0.520858,27,{"v":4.69106736523234e-07,"d":"4.69E-07"},-3.03857699547804,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chitin (GO:0010200);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: ligase activity (GO:0016874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: cellular response to nitrogen levels (GO:0043562);; Biological Process: single-organism process (GO:0044699);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K10664|0|brp:103870845|K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ATL6","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger;; RING-type zinc-finger","E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase ATL6 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra035839","Bra035839",0.737212,80,0.622265,73,0.446936,55,2.769594,234,2.525771,202,3.444748,318,{"v":1.35066195703676e-07,"d":"1.35E-07"},1.78263014171202,"up","--","--","Cellular Component: chromatin (GO:0000785);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin silencing (GO:0006342);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: heat acclimation (GO:0010286);; Molecular Function: phosphatidylinositol-5-phosphate binding (GO:0010314);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: metal ion transport (GO:0030001);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: response to chemical (GO:0042221);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: single-organism metabolic process (GO:0044710);; Molecular Function: transition metal ion binding (GO:0046914);; Biological Process: cellular transition metal ion homeostasis (GO:0046916);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: histone H3-K4 methylation (GO:0051568);; ","--","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 7 OS=Arabidopsis thaliana OX=3702 GN=HIPP07 PE=1 SV=1","S","Function unknown","PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179)"]
["Bra038899","Bra038899",6.652859,524,11.644978,919,11.017665,792,3.06005,175,5.305993,280,4.552098,251,{"v":2.88420687225897e-05,"d":"2.88E-05"},-1.6919656905377,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: extracellular region (GO:0005576);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: alkaloid biosynthetic process (GO:0009821);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: regulation of proton transport (GO:0010155);; Molecular Function: strictosidine synthase activity (GO:0016844);; Biological Process: cell differentiation (GO:0030154);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: protein autophosphorylation (GO:0046777);; ","--","--","[R]","General function prediction only","Strictosidine synthase;; SMP-30/Gluconolaconase/LRE-like region;; NHL repeat","Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SSL5 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra038470","Bra038470",191.602181,20223,162.552464,19461,139.000482,14449,94.309148,7291,80.440296,6161,72.324042,5493,{"v":8.06458717687235e-17,"d":"8.06E-17"},-1.5486601551686,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: ligase activity (GO:0016874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: regulation of long-day photoperiodism, flowering (GO:0048586);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);; ","--","--","[S]","Function unknown","Armadillo/beta-catenin-like repeat","U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3","S","Function unknown","PREDICTED: U-box domain-containing protein 4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; molecular function: binding (GO:0005488)"]
["Bra003635","Bra003635",32.591381,2783,19.928146,1717,17.163494,1356,9.40437,568,8.64077,503,8.441913,494,{"v":2.77437953466906e-13,"d":"2.77E-13"},-1.89793942064943,"down","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plant-type cell wall (GO:0009505);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: carbohydrate binding (GO:0030246);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: single-organism transport (GO:0044765);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","--","D-mannose binding lectin","EP1-like glycoprotein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g78850 PE=1 SV=1","S","Function unknown","PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra018877","Bra018877",4.331778,472,3.030058,313,2.552784,264,8.1144,661,10.12486,719,12.850848,915,{"v":9.17582559033332e-05,"d":"9.18E-05"},1.09203892988828,"up","--","--","--","--","--","--","--","Domain of unknown function (DUF4477)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103871314 isoform X1 [Brassica rapa]","--"]
["Bra027465","Bra027465",4.122525,266,0.985722,64,0.778307,45,19.149766,893,42.446239,1887,38.851254,1744,{"v":8.73769547660166e-08,"d":"8.74E-08"},3.38007127294749,"up","--","--","Biological Process: response to cold (GO:0009409);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103839269 isoform X2 [Brassica rapa]","biological process: response to stimulus (GO:0050896)"]
["Bra002877","Bra002877",0.371744,60,0.125331,21,0.186368,28,1.180251,134,1.147159,126,1.082172,119,0.000449556768789828,1.71610302118331,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to organic substance (GO:0010033);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: mRNA modification (GO:0016556);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular protein complex assembly (GO:0043623);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra024659","Bra024659",870.871216,38522,1184.550293,52876,997.534912,40819,249.738205,7816,457.950745,13796,469.12326,14220,{"v":2.6307977562176e-08,"d":"2.63E-08"},-1.90379793925304,"down","[R]","General function prediction only","Molecular Function: glutathione transferase activity (GO:0004364);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: aging (GO:0007568);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: de-etiolation (GO:0009704);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Molecular Function: enzyme binding (GO:0019899);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Molecular Function: glutathione binding (GO:0043295);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: lateral root development (GO:0048527);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: response to growth hormone (GO:0060416);; Biological Process: proteasome core complex assembly (GO:0080129);; Biological Process: negative regulation of response to water deprivation (GO:0080148);; Biological Process: response to karrikin (GO:0080167);; Biological Process: regulation of response to red or far red light (GO:2000030);; ","K00799|2.17599e-155|brp:103840683|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase U13-like","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain","Glutathione S-transferase U13 OS=Arabidopsis thaliana OX=3702 GN=GSTU13 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase U13-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra010692","Bra010692",4.215167,140,2.748341,87,5.116393,145,10.442519,247,14.589835,313,12.491301,279,0.0021976205770367,1.09661056876728,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","Retinal tissue protein","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103835129 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra001815","Bra001815",18.56723,833,20.095568,909,17.270599,717,14.83062,471,12.899096,394,11.065279,340,{"v":3.89190089348052e-06,"d":"3.89E-06"},-1.07291823797454,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: DNA repair (GO:0006281);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to wounding (GO:0009611);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: photoperiodism (GO:0009648);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: far-red light signaling pathway (GO:0010018);; Biological Process: response to organic substance (GO:0010033);; Biological Process: negative regulation of photomorphogenesis (GO:0010100);; Biological Process: response to chitin (GO:0010200);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","--","B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1","S","Function unknown","PREDICTED: B-box zinc finger protein 32-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052)"]
["Bra040193","Bra040193",0.741156,87,1.059798,125,0.985206,107,0.423442,39,0.356312,29,0.329447,27,{"v":9.69776330398987e-05,"d":"9.70E-05"},-1.75663615481755,"down","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: meiosis I (GO:0007127);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: cellular response to water deprivation (GO:0042631);; ","--","--","--","--","F-box associated domain","F-box protein DOR OS=Arabidopsis thaliana OX=3702 GN=DOR PE=1 SV=2","--","--","PREDICTED: F-box protein DOR-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra026004","Bra026004",0.906861,41,0.902521,41,1.061767,45,2.765968,89,10.477852,322,9.403278,291,0.000149114797253718,2.26393814511668,"up","[L]","Replication, recombination and repair","Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: chloroplast (GO:0009507);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; ","--","--","--","--","SOUL heme-binding protein","Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g10130 PE=1 SV=1","S","Function unknown","PREDICTED: heme-binding protein 2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra040601","Bra040601",16.84816,792,20.453151,998,16.848463,859,13.129051,523,4.145632,181,6.063886,215,0.001721146920251,-1.53696900768834,"down","--","--","Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: protein tyrosine phosphatase activity (GO:0004725);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to chitin (GO:0010200);; Biological Process: peptidyl-tyrosine dephosphorylation (GO:0035335);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: negative regulation of MAP kinase activity (GO:0043407);; ","K18045|4.42031e-138|brp:103870892|K18045 tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] | (RefSeq) probable tyrosine-protein phosphatase At1g05000","--","[V]","Defense mechanisms","Tyrosine phosphatase family;; Tyrosine phosphatase family;; Protein-tyrosine phosphatase","Tyrosine-protein phosphatase DSP3 OS=Arabidopsis thaliana OX=3702 GN=DSP3 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra021636","Bra021636",93.521477,9181,162.933151,16141,161.532394,14670,62.313835,4328,86.896721,5810,83.218857,5599,0.000103406294551757,-1.39631996808742,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin metabolic process (GO:0009808);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Molecular Function: trans-cinnamate 4-monooxygenase activity (GO:0016710);; Molecular Function: heme binding (GO:0020037);; Biological Process: growth (GO:0040007);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity (GO:0072533);; Biological Process: response to karrikin (GO:0080167);; ","K00487|0|brp:103865042|K00487 trans-cinnamate 4-monooxygenase [EC:1.14.13.11] | (RefSeq) trans-cinnamate 4-monooxygenase-like","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Phenylalanine metabolism (ko00360);; Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana OX=3702 GN=CYP73A5 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: trans-cinnamate 4-monooxygenase-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: growth (GO:0040007)"]
["Bra026184","Bra026184",7.492681,996,3.029018,406,3.038053,370,11.643671,1096,15.720645,1425,14.450598,1318,0.00788125187306329,1.09240027253993,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: double-strand break repair (GO:0006302);; Biological Process: mitotic recombination (GO:0006312);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: synapsis (GO:0007129);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: embryo sac egg cell differentiation (GO:0009560);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Cellular Component: cortical microtubule, transverse to long axis (GO:0010005);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: histone phosphorylation (GO:0016572);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Biological Process: actin nucleation (GO:0045010);; Biological Process: meiotic chromosome segregation (GO:0045132);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: spindle assembly (GO:0051225);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","--","--","--","--","Microtubule-associated protein 70","Microtubule-associated protein 70-4 OS=Arabidopsis thaliana OX=3702 GN=MAP70.4 PE=1 SV=1","Z","Cytoskeleton","PREDICTED: microtubule-associated protein 70-4 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422)"]
["Bra031697","Bra031697",1.458382,157,0.926774,111,1.138085,120,0,0,0,0,0.026242,3,{"v":6.42066921618106e-16,"d":"6.42E-16"},-6.10220290381886,"down","--","--","Biological Process: amino acid transmembrane transport (GO:0003333);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: acidic amino acid transmembrane transporter activity (GO:0015172);; Molecular Function: basic amino acid transmembrane transporter activity (GO:0015174);; Molecular Function: neutral amino acid transmembrane transporter activity (GO:0015175);; Molecular Function: primary active transmembrane transporter activity (GO:0015399);; Biological Process: neutral amino acid transport (GO:0015804);; Biological Process: arginine transport (GO:0015809);; Biological Process: aspartate transport (GO:0015810);; Biological Process: tryptophan transport (GO:0015827);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: amino acid import (GO:0043090);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","[E]","Amino acid transport and metabolism","Transmembrane amino acid transporter protein","Amino acid permease 8 OS=Arabidopsis thaliana OX=3702 GN=AAP8 PE=1 SV=1","E","Amino acid transport and metabolism","BnaA09g57240D [Brassica napus]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215)"]
["Bra033709","Bra033709",10.155639,592,16.554646,973,12.462199,671,7.215052,298,6.239824,248,5.028114,201,{"v":4.31238203257116e-06,"d":"4.31E-06"},-1.6172677906984,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: response to stress (GO:0006950);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plasmodesmata-mediated intercellular transport (GO:0010497);; Biological Process: response to chemical (GO:0042221);; Cellular Component: cell part (GO:0044464);; Biological Process: transport of virus in multicellular host (GO:0046739);; Biological Process: response to other organism (GO:0051707);; ","--","--","--","--","Salt stress response/antifungal","Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana OX=3702 GN=CRRSP56 PE=1 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: cysteine-rich repeat secretory protein 56 isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: locomotion (GO:0040011);; biological process: multi-organism process (GO:0051704)"]
["Bra025868","Bra025868",0.739143,36,0.782022,39,0.947946,43,3.86009,133,9.523238,316,11.435214,382,{"v":6.67307502876127e-07,"d":"6.67E-07"},2.62155554545966,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: chloroplast organization (GO:0009658);; Cellular Component: cortical endoplasmic reticulum (GO:0032541);; ","--","--","--","--","Protein of unknown function, DUF617","Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana OX=3702 GN=MIZ1 PE=1 SV=1","S","Function unknown","PREDICTED: protein MIZU-KUSSEI 1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra031981","Bra031981",1.898182,198,3.097759,322,2.643029,265,0.322566,37,0.391953,43,0.850119,67,{"v":9.15989743237286e-08,"d":"9.16E-08"},-2.40107392561913,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: megagametogenesis (GO:0009561);; Cellular Component: membrane (GO:0016020);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: pollen tube development (GO:0048868);; Biological Process: cell wall organization or biogenesis (GO:0071554);; ","--","--","[GMW]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis;; Extracellular structures","Exostosin family","Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana OX=3702 GN=ARAD1 PE=1 SV=1","S","Function unknown","PREDICTED: probable arabinosyltransferase ARAD1 [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: reproductive process (GO:0022414);; biological process: cellular process (GO:0009987)"]
["Bra031769","Bra031769",4.305984,176,5.816266,200,4.858837,195,67.906999,1747,111.532066,2741,110.057167,2856,{"v":2.77651518718671e-32,"d":"2.78E-32"},3.56538253686873,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: protein disulfide isomerase activity (GO:0003756);; Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein folding (GO:0006457);; Biological Process: phosphatidylinositol biosynthetic process (GO:0006661);; Biological Process: glycerol ether metabolic process (GO:0006662);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: cell communication (GO:0007154);; Molecular Function: enzyme activator activity (GO:0008047);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: plastid (GO:0009536);; Biological Process: response to microbial phytotoxin (GO:0010188);; Biological Process: plasmodesmata-mediated intercellular transport (GO:0010497);; Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);; Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671);; Biological Process: positive regulation of catalytic activity (GO:0043085);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: cell redox homeostasis (GO:0045454);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: protein deglutathionylation (GO:0080058);; ","K03671|3.57159e-88|brp:103843239|K03671 thioredoxin 1 | (RefSeq) thioredoxin-like protein CXXS1","--","[O]","Posttranslational modification, protein turnover, chaperones","Thioredoxin","Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: thioredoxin-like protein CXXS1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell junction (GO:0030054);; biological process: localization (GO:0051179);; cellular component: extracellular region (GO:0005576);; biological process: multi-organism process (GO:0051704)"]
["Bra021368","Bra021368",1.59067,49,0.824087,26,1.186632,34,5.767092,124,5.26485,109,7.288823,152,{"v":2.20441530649759e-05,"d":"2.20E-05"},1.7358542400744,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","[K]","Transcription","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC106295897 [Brassica oleracea var. oleracea] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000113","Bra000113",2.994216,211,3.404359,242,3.696933,243,0,0,0,0,0,0,{"v":3.95543431746878e-20,"d":"3.96E-20"},-8.08166587010864,"down","--","--","Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Biological Process: iron ion transport (GO:0006826);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: membrane (GO:0016020);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: heme binding (GO:0020037);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: xylan metabolic process (GO:0045491);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to hypoxia (GO:0071456);; ","K00430|0|brp:103857839|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 24","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 24 OS=Arabidopsis thaliana OX=3702 GN=PER24 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 24 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: multicellular organismal process (GO:0032501)"]
["Bra007000","Bra007000",2.643799,216,3.204289,278,2.60249,210,0.731983,40,0.046444,3,0.184407,12,{"v":1.76530001022912e-05,"d":"1.77E-05"},-3.32794069635009,"down","[R]","General function prediction only","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plastid (GO:0009536);; Biological Process: cytokinin biosynthetic process (GO:0009691);; Biological Process: maintenance of floral meristem identity (GO:0010076);; Biological Process: maintenance of inflorescence meristem identity (GO:0010077);; Biological Process: regulation of vegetative meristem growth (GO:0010083);; Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: specification of plant organ number (GO:0048832);; ","K06966|7.22744e-113|brp:103841270|K06966 uncharacterized protein | (RefSeq) cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4-like","--","--","--","Possible lysine decarboxylase","Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1","S","Function unknown","PREDICTED: cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG4-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra036665","Bra036665",0.904922,105,0.72102,86,0.727605,73,2.643968,173,3.252879,227,2.375599,165,0.000929541441182975,1.04286569582034,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: cell wall (GO:0005618);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: pollen germination (GO:0009846);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: actin cytoskeleton organization (GO:0030036);; Biological Process: actin filament-based movement (GO:0030048);; Molecular Function: actin filament binding (GO:0051015);; Biological Process: Golgi localization (GO:0051645);; Biological Process: mitochondrion localization (GO:0051646);; Biological Process: peroxisome localization (GO:0060151);; ","--","--","[Z]","Cytoskeleton","Calponin homology (CH) domain;; CAMSAP CH domain;; CH-like domain in sperm protein","Fimbrin-4 OS=Arabidopsis thaliana OX=3702 GN=FIM4 PE=3 SV=1","Z","Cytoskeleton","PREDICTED: fimbrin-4 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179)"]
["Bra001456","Bra001456",0.972612,97,1.925393,216,1.83368,210,0.022131,3,0,0,0,0,{"v":7.63606014115527e-14,"d":"7.64E-14"},-6.26214495044819,"down","[G]","Carbohydrate transport and metabolism","--","--","--","--","--","Protein of unknown function, DUF547;; Leucine-zipper of ternary complex factor MIP1","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103860157 [Brassica rapa] ","--"]
["Bra028878","Bra028878",9.226206,568,14.181295,866,15.028648,884,10.35557,501,6.919133,273,7.906393,316,0.00616533712446334,-1.14266253163359,"down","--","--","Molecular Function: structural constituent of cell wall (GO:0005199);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: syncytium formation (GO:0006949);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: plant-type cell wall loosening (GO:0009828);; Biological Process: plant-type cell wall modification involved in multidimensional cell growth (GO:0009831);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of stomatal movement (GO:0010119);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: response to arsenic-containing substance (GO:0046685);; ","--","--","--","--","Pollen allergen;; Lytic transglycolase","Expansin-A9 OS=Arabidopsis thaliana OX=3702 GN=EXPA9 PE=2 SV=1","G","Carbohydrate transport and metabolism","expansin-A9-like precursor [Brassica rapa] ","molecular function: structural molecule activity (GO:0005198);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020)"]
["Bra039226","Bra039226",0.206837,24,0.382893,44,0.273322,29,1.399507,111,1.374767,105,2.021196,156,0.000231689052388868,1.79748902065441,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","--","QWRF family","QWRF motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=QWRF4 PE=3 SV=1","S","Function unknown","BnaA09g41690D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: extracellular region (GO:0005576)"]
["Bra023718","Bra023718",3.41863,381,3.121587,347,2.223159,228,9.375912,727,9.318831,697,9.255363,702,{"v":6.38112031632206e-07,"d":"6.38E-07"},1.10940026423182,"up","[T]","Signal transduction mechanisms","Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: RNA processing (GO:0006396);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Cellular Component: protein serine/threonine phosphatase complex (GO:0008287);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: defense response to bacterium (GO:0042742);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to other organism (GO:0051707);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K01090|0|brp:103851221|K01090 protein phosphatase [EC:3.1.3.16] | (RefSeq) protein phosphatase 2C 70","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; FHA domain;; Protein phosphatase 2C","Protein phosphatase 2C 70 OS=Arabidopsis thaliana OX=3702 GN=KAPP PE=1 SV=2","T","Signal transduction mechanisms","PREDICTED: protein phosphatase 2C 70 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704);; cellular component: organelle (GO:0043226)"]
["Bra015774","Bra015774",1.714391,102,3.872234,232,4.204258,231,0.022041,1,0.190189,8,0,0,{"v":1.30285814150656e-08,"d":"1.30E-08"},-5.03150057744526,"down","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: root development (GO:0048364);; Biological Process: developmental growth (GO:0048589);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","--","--","Arabidopsis protein of unknown function","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103832073 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007)"]
["Bra027595","Bra027595",2.704482,861,5.520388,1742,6.550663,1889,2.536839,588,1.941996,394,1.591337,352,0.000107026598249368,-1.7867994999887,"down","[K]","Transcription","Molecular Function: DNA binding (GO:0003677);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to virus (GO:0009615);; Biological Process: plant-type hypersensitive response (GO:0009626);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to inorganic substance (GO:0010035);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: membrane organization (GO:0016044);; Molecular Function: purine ribonucleoside binding (GO:0032550);; Molecular Function: adenyl ribonucleotide binding (GO:0032559);; Molecular Function: anion binding (GO:0043168);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","NB-ARC domain;; Leucine Rich Repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat;; TIR domain","Probable WRKY transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=WRKY19 PE=3 SV=1","--","--","PREDICTED: probable WRKY transcription factor 19 [Brassica rapa]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179)"]
["Bra010397","Bra010397",93.212303,1230,92.657982,1234,112.057838,1368,98.551506,920,52.321972,471,60.622601,549,0.00354907592130006,-1.03006791873349,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC103834798 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra032810","Bra032810",15.739305,688,24.594389,1084,26.485361,1070,12.035808,372,12.629431,376,9.713895,291,{"v":2.24305725917843e-05,"d":"2.24E-05"},-1.50198941005401,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103839057 [Brassica rapa]","--"]
["Bra010922","Bra010922",379.498627,17229,710.702271,32559,713.545776,29967,279.796661,8987,183.630249,5678,191.032242,5943,{"v":3.80247204260296e-07,"d":"3.80E-07"},-1.98981358126044,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: photoprotection (GO:0010117);; Biological Process: response to chitin (GO:0010200);; Biological Process: photosynthesis (GO:0015979);; Biological Process: multicellular organism growth (GO:0035264);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: phosphate ion homeostasis (GO:0055062);; Biological Process: regulation of root development (GO:2000280);; ","--","--","[R]","General function prediction only","C2H2-type zinc finger;; C2H2-type zinc finger;; Zinc-finger double-stranded RNA-binding;; Zinc-finger of C2H2 type","Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1","S","Function unknown","PREDICTED: zinc finger protein ZAT10-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra003402","Bra003402",2.487888,803,4.223706,1370,4.585182,1361,1.527062,338,1.504956,303,1.765866,390,{"v":9.60376617767968e-07,"d":"9.60E-07"},-1.81934166450145,"down","[V]","Defense mechanisms","Cellular Component: plant-type vacuole (GO:0000325);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Molecular Function: xenobiotic-transporting ATPase activity (GO:0008559);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nematode (GO:0009624);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Molecular Function: chlorophyll catabolite transmembrane transporter activity (GO:0010290);; Molecular Function: glutathione S-conjugate-exporting ATPase activity (GO:0015431);; Molecular Function: ATPase-coupled arsenite transmembrane transporter activity (GO:0015446);; Biological Process: arsenite transport (GO:0015700);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: response to arsenic-containing substance (GO:0046685);; Cellular Component: apoplast (GO:0048046);; Biological Process: transmembrane transport (GO:0055085);; Molecular Function: phytochelatin transmembrane transporter activity (GO:0071992);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter transmembrane region;; ABC transporter;; P-loop containing region of AAA domain;; 50S ribosome-binding GTPase","ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2","V","Defense mechanisms","PREDICTED: putative ABC transporter C family member 15 isoform X2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; cellular component: membrane part (GO:0044425);; cellular component: extracellular region (GO:0005576)"]
["Bra037630","Bra037630",17.948933,822,14.745317,682,11.693341,496,2.209859,72,7.592863,237,5.545485,174,{"v":5.38139381151595e-05,"d":"5.38E-05"},-1.98838163612279,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to chitin (GO:0010200);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to freezing (GO:0071497);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=2 SV=2","K","Transcription","PREDICTED: ethylene-responsive transcription factor 13-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra005783","Bra005783",1.500121,55,2.334581,87,2.237986,75,0.078546,2,0.144513,4,0.664004,19,0.00164892533114703,-2.73578744704713,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: transcription cofactor activity (GO:0003712);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Molecular Function: phosphatidylethanolamine binding (GO:0008429);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: inflorescence development (GO:0010229);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: vesicle (GO:0031982);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: short-day photoperiodism, flowering (GO:0048575);; Biological Process: negative regulation of cell aging (GO:0090344);; ","--","--","[R]","General function prediction only","Phosphatidylethanolamine-binding protein","Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1","S","Function unknown","PREDICTED: protein TERMINAL FLOWER 1 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: protein binding transcription factor activity (GO:0000988);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987)"]
["Bra036532","Bra036532",8.337811,288,2.935273,103,3.931453,126,3.283984,81,2.463076,58,1.874242,45,0.00719731541036671,-1.42669262210961,"down","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: anchored component of membrane (GO:0031225);; Cellular Component: aleurone grain membrane (GO:0032578);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism process (GO:0044699);; Biological Process: single-organism biosynthetic process (GO:0044711);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; ","--","--","--","--","Plastocyanin-like domain","Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=1 SV=2","S","Function unknown","PREDICTED: early nodulin-like protein 3 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell junction (GO:0030054);; cellular component: membrane part (GO:0044425);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152)"]
["Bra000679","Bra000679",0.31585,33,0.37566,36,0.850794,53,2.240548,124,2.523958,143,3.346134,160,0.000159767323359851,1.67460637880803,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; ","--","--","[R]","General function prediction only","CTLH/CRA C-terminal to LisH motif domain;; SPRY domain","Ran-binding protein M homolog OS=Arabidopsis thaliana OX=3702 GN=RANBPM PE=1 SV=1","S","Function unknown","PREDICTED: ran-binding protein 10-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra009077","Bra009077",3.539574,60,6.63029,113,5.287146,83,1.441231,18,0.797086,10,0.349349,5,{"v":3.12299984673977e-05,"d":"3.12E-05"},-2.79160027883982,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","BnaC09g46810D [Brassica napus]","--"]
["Bra013274","Bra013274",0.833973,91,1.205747,127,1.138838,136,5.756441,437,6.140872,508,5.726857,462,{"v":2.22909444573268e-08,"d":"2.23E-08"},1.8777584561984,"up","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);; Biological Process: suspensor development (GO:0010098);; Biological Process: positive regulation of intracellular signal transduction (GO:0010740);; Molecular Function: kinase activity (GO:0016301);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: regulation of innate immune response (GO:0045088);; Biological Process: localization (GO:0051179);; Biological Process: zygote elongation (GO:0080159);; ","K14500|0|brp:103855933|K14500 BR-signaling kinase [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase At4g35230","Plant hormone signal transduction (ko04075)","--","--","Protein kinase domain;; Protein tyrosine kinase","Serine/threonine-protein kinase BSK2 OS=Arabidopsis thaliana OX=3702 GN=BSK2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable serine/threonine-protein kinase At4g35230 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra038088","Bra038088",112.24278,13311,23.691074,2829,24.478068,2671,24.057405,2011,22.692057,1821,22.973794,1859,0.00776191949937243,-1.58142536273973,"down","[G]","Carbohydrate transport and metabolism","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: microsporocyte differentiation (GO:0010480);; Biological Process: regulation of hormone levels (GO:0010817);; Molecular Function: beta-amylase activity (GO:0016161);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Molecular Function: cation binding (GO:0043169);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: protein self-association (GO:0043621);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: gametophyte development (GO:0048229);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of shoot system development (GO:0048831);; Biological Process: cell wall organization (GO:0071555);; Biological Process: response to herbivore (GO:0080027);; ","--","--","--","--","Glycosyl hydrolase family 14","Beta-amylase 5 OS=Arabidopsis thaliana OX=3702 GN=BAM5 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-amylase 5 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704)"]
["Bra036881","Bra036881",18.886979,1340,12.584901,843,12.925571,790,3.55921,178,5.673236,279,6.708269,309,{"v":2.20826033798855e-09,"d":"2.21E-09"},-1.94209743763506,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: secretion by cell (GO:0032940);; Molecular Function: glucan 1,4-alpha-maltotetraohydrolase activity (GO:0033910);; Cellular Component: apoplast (GO:0048046);; ","K01176|0|brp:103871863|K01176 alpha-amylase [EC:3.2.1.1] | (RefSeq) alpha-amylase 1","Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Alpha-amylase C-terminal beta-sheet domain;; Alpha amylase, catalytic domain;; Glycosyl hydrolase family 70","Alpha-amylase 1 OS=Arabidopsis thaliana OX=3702 GN=AMY1 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: alpha-amylase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; cellular component: extracellular region (GO:0005576)"]
["Bra016006","Bra016006",9.394579,383,15.677858,645,15.574566,587,2.468969,72,2.545336,71,2.656452,75,{"v":7.01186152284907e-15,"d":"7.01E-15"},-2.89658416950174,"down","--","--","Molecular Function: endopeptidase inhibitor activity (GO:0004866);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to nitrate (GO:0010167);; Biological Process: programmed cell death (GO:0012501);; Biological Process: nitrate transport (GO:0015706);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; ","--","--","--","--","Trypsin and protease inhibitor","Kunitz trypsin inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=KTI1 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: alpha-amylase/subtilisin inhibitor-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra035761","Bra035761",0.673507,109,0.542393,79,0.465217,61,3.184997,348,3.881387,392,4.783508,504,{"v":4.00963539833493e-13,"d":"4.01E-13"},2.25483700699487,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","--","Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH123 isoform X2 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152)"]
["Bra024302","Bra024302",1.101321,41,0.99773,37,0.557592,19,5.136349,133,4.026227,101,4.426369,111,{"v":5.36789372320616e-05,"d":"5.37E-05"},1.7441890776373,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873872 isoform X2 [Brassica rapa]","--"]
["Bra003675","Bra003675",48.78878,3120,66.931814,4604,53.535631,3168,30.75629,1393,38.304851,1670,41.554539,1822,{"v":3.68786535698413e-05,"d":"3.69E-05"},-1.20056832700798,"down","[E]","Amino acid transport and metabolism","Molecular Function: L-aspartate:2-oxoglutarate aminotransferase activity (GO:0004069);; Molecular Function: protein binding (GO:0005515);; Biological Process: coenzyme metabolic process (GO:0006732);; Biological Process: response to stress (GO:0006950);; Biological Process: cell communication (GO:0007154);; Molecular Function: transaminase activity (GO:0008483);; Biological Process: aromatic amino acid family biosynthetic process, prephenate pathway (GO:0009095);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to hormone (GO:0009725);; Molecular Function: carbon-sulfur lyase activity (GO:0016846);; Molecular Function: 1-aminocyclopropane-1-carboxylate synthase activity (GO:0016847);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: secondary metabolic process (GO:0019748);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: 1-aminocyclopropane-1-carboxylate biosynthetic process (GO:0042218);; Biological Process: sulfur compound biosynthetic process (GO:0044272);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Molecular Function: L-phenylalanine:2-oxoglutarate aminotransferase activity (GO:0080130);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: alpha-amino acid catabolic process (GO:1901606);; Biological Process: alpha-amino acid biosynthetic process (GO:1901607);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[E]","Amino acid transport and metabolism","Aminotransferase class I and II;; DegT/DnrJ/EryC1/StrS aminotransferase family;; Aminotransferase class-V;; Cys/Met metabolism PLP-dependent enzyme","Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Arabidopsis thaliana OX=3702 GN=PAT PE=1 SV=2","E","Amino acid transport and metabolism","PREDICTED: uncharacterized protein LOC103830559 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra017417","Bra017417",3.112287,167,3.916865,221,4.356189,212,17.483283,634,35.703141,1277,33.904503,1248,{"v":1.72075481574329e-08,"d":"1.72E-08"},2.26485752986963,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: glutathione transferase activity (GO:0004364);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: maleylacetoacetate isomerase activity (GO:0016034);; Biological Process: cellular response to extracellular stimulus (GO:0031668);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Molecular Function: glutathione binding (GO:0043295);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; Biological Process: homogentisate catabolic process (GO:1902000);; ","K01800|4.12961e-167|brp:103839444|K01800 maleylacetoacetate isomerase [EC:5.2.1.2] | (RefSeq) glutathione S-transferase Z1-like","Tyrosine metabolism (ko00350)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain","Glutathione S-transferase Z1 OS=Arabidopsis thaliana OX=3702 GN=GSTZ1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase Z1-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra022454","Bra022454",0.06912,6,0.098858,8,0.298391,21,1.430673,77,1.651799,86,2.874926,150,0.00010538135654888,2.77161668147558,"up","--","--","Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; ","--","--","--","--","F-box associated;; F-box domain;; F-box-like;; F-box associated domain","Putative F-box protein At4g10190 OS=Arabidopsis thaliana OX=3702 GN=At4g10190 PE=4 SV=2","S","Function unknown","PREDICTED: putative F-box protein At4g10190 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra002993","Bra002993",16.568468,2758,12.638425,2123,12.302078,1895,7.254786,855,4.617509,524,4.380411,500,{"v":2.65532244764449e-11,"d":"2.66E-11"},-1.86534599718384,"down","[T]","Signal transduction mechanisms","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: sister chromatid cohesion (GO:0007062);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to metal ion (GO:0010038);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: pollen tube reception (GO:0010483);; Cellular Component: apical plasma membrane (GO:0016324);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: meiotic DNA double-strand break formation (GO:0042138);; Cellular Component: filiform apparatus (GO:0043680);; Biological Process: meiotic chromosome segregation (GO:0045132);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Cellular Component: pollen tube tip (GO:0090404);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Carbohydrate-binding protein of the ER;; Di-glucose binding within endoplasmic reticulum","Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana OX=3702 GN=THE1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: receptor-like protein kinase THESEUS 1 [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425)"]
["Bra028752","Bra028752",131.261028,11726,319.284752,28808,358.63401,29597,77.651509,4654,30.865395,1872,37.827541,2199,{"v":2.63082118736118e-08,"d":"2.63E-08"},-2.96018600545919,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: vacuole organization (GO:0007033);; Biological Process: response to UV (GO:0009411);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: proanthocyanidin biosynthetic process (GO:0010023);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: detection of bacterium (GO:0016045);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706);; Molecular Function: flavonol synthase activity (GO:0045431);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: seed development (GO:0048316);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: response to karrikin (GO:0080167);; ","--","--","[QR]","Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Probable 2-oxoglutarate-dependent dioxygenase At5g05600 OS=Arabidopsis thaliana OX=3702 GN=At5g05600 PE=2 SV=1","S","Function unknown","PREDICTED: flavonol synthase/flavanone 3-hydroxylase isoform X2 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra012329","Bra012329",1.450374,86,0.543565,33,0.152277,9,2.732714,115,6.375068,257,5.953043,241,0.00653194825902978,2.07607470897383,"up","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: guard cell differentiation (GO:0010052);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: regulation of cell proliferation (GO:0042127);; Biological Process: positive regulation of cell differentiation (GO:0045597);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: negative regulation of cell division (GO:0051782);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2","K","Transcription","PREDICTED: transcription factor bHLH94-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra016908","Bra016908",93.137398,9089,8.367913,825,8.811547,796,2.724937,189,0.876912,59,0.648094,44,{"v":2.39729444746513e-07,"d":"2.40E-07"},-4.38371954119988,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: sulfur amino acid metabolic process (GO:0000096);; Biological Process: tryptophan biosynthetic process (GO:0000162);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycine catabolic process (GO:0006546);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: unsaturated fatty acid biosynthetic process (GO:0006636);; Biological Process: oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: vitamin metabolic process (GO:0006766);; Biological Process: lipoate metabolic process (GO:0009106);; Biological Process: coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: shade avoidance (GO:0009641);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: indole glucosinolate biosynthetic process (GO:0009759);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to red light (GO:0010114);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (GO:0016709);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: oxygen binding (GO:0019825);; Biological Process: adventitious root development (GO:0048830);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; ","K12156|0|brp:103865912|K12156 cytochrome P450 family 83 subfamily A polypeptide 1 [EC:1.14.-.-] | (RefSeq) CYP83A1-2; cytochrome P450 83A1-like","Glucosinolate biosynthesis (ko00966);; 2-Oxocarboxylic acid metabolism (ko01210)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 83A1 OS=Arabidopsis thaliana OX=3702 GN=CYP83A1 PE=1 SV=2","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 83A1-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra015092","Bra015092",4.624412,187,2.762156,113,2.571043,96,9.494311,272,12.256389,337,9.050748,251,0.00129807554870154,1.07921465534026,"up","--","--","--","--","--","--","--","Zinc finger, C3HC4 type (RING finger);; Prokaryotic RING finger family 4;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger)","Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana OX=3702 GN=LUL4 PE=2 SV=1","S","Function unknown","PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Brassica rapa] ","--"]
["Bra016871","Bra016871",1.214557,229,1.338186,252,1.420355,245,13.808834,1830,11.922427,1595,11.113782,1454,{"v":8.77440012398566e-36,"d":"8.77E-36"},2.66439426403351,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","--","K00276|0|brp:103865952|K00276 primary-amine oxidase [EC:1.4.3.21] | (RefSeq) copper methylamine oxidase","Glycine, serine and threonine metabolism (ko00260);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; beta-Alanine metabolism (ko00410);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Copper amine oxidase, enzyme domain;; Copper amine oxidase, N3 domain","Primary amine oxidase OS=Pisum sativum OX=3888 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103865952 [Brassica rapa]","--"]
["Bra040610","Bra040610",10.148236,380,18.027061,682,18.058609,626,7.795228,207,7.328335,187,5.167513,133,{"v":3.72086491135509e-05,"d":"3.72E-05"},-1.71438982993558,"down","[R]","General function prediction only","Biological Process: response to karrikin (GO:0080167);; ","K19761|1.54373e-125|brp:103870881|K19761 gamma-glutamylaminecyclotransferase [EC:2.3.2.-] | (RefSeq) putative gamma-glutamylcyclotransferase At3g02910","--","[S]","Function unknown","Gamma-glutamyl cyclotransferase, AIG2-like","Putative gamma-glutamylcyclotransferase At3g02910 OS=Arabidopsis thaliana OX=3702 GN=At3g02910 PE=2 SV=2","S","Function unknown","PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Brassica rapa]","biological process: response to stimulus (GO:0050896)"]
["Bra021744","Bra021744",32.499596,4364,38.089102,4910,43.755202,5191,17.882225,1542,14.980207,1407,18.443326,1706,{"v":1.90486515572195e-13,"d":"1.90E-13"},-1.68793917092729,"down","[M]","Cell wall/membrane/envelope biogenesis","Biological Process: activation of MAPKK activity (GO:0000186);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: signal transducer activity (GO:0004871);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cell death (GO:0008219);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: response to extracellular stimulus (GO:0009991);; Biological Process: response to inorganic substance (GO:0010035);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular lipid metabolic process (GO:0044255);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: innate immune response (GO:0045087);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: animal organ development (GO:0048513);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: cell division (GO:0051301);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeats (many copies);; Ankyrin repeat","Integrin-linked protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=ILK1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Brassica rapa]","biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376)"]
["Bra015139","Bra015139",11.007608,648,15.672818,930,12.31309,670,12.729764,530,7.00473,281,7.297325,294,0.00721957829119273,-1.06578218970309,"down","--","--","--","--","--","--","--","Plant protein of unknown function (DUF868)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828543 [Brassica rapa]","--"]
["Bra029354","Bra029354",1.753941,218,2.758944,338,3.153897,366,20.326456,1728,15.677449,1297,16.845827,1406,{"v":1.21902819509394e-09,"d":"1.22E-09"},2.1312547456394,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to stress (GO:0006950);; Biological Process: pattern specification process (GO:0007389);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to hormone (GO:0009725);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: epidermal cell fate specification (GO:0009957);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: histone modification (GO:0016570);; Biological Process: pigment biosynthetic process (GO:0046148);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: floral organ formation (GO:0048449);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2","--","--","PREDICTED: transcription factor BIM1-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra031053","Bra031053",9.13296,912,29.771472,2965,33.804874,3139,8.69477,620,3.994537,283,6.615745,434,{"v":4.83586786863678e-05,"d":"4.84E-05"},-2.36267235159522,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cation transport (GO:0006812);; Biological Process: amino acid transport (GO:0006865);; Biological Process: defense response (GO:0006952);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: response to wounding (GO:0009611);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: establishment of cell polarity (GO:0030010);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular response to heat (GO:0034605);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of defense response to virus by host (GO:0050691);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 61 OS=Arabidopsis thaliana OX=3702 GN=WRKY61 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 61 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra010349","Bra010349",6.231521,509,21.467424,1770,19.059483,1441,2.523442,146,1.858186,104,2.461208,138,{"v":2.64967789812945e-09,"d":"2.65E-09"},-3.19318785103584,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Biological Process: defense response (GO:0006952);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: programmed cell death (GO:0012501);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K10664|0|brp:103834742|K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ATL42-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-H2 zinc finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger","E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Brassica_rapa_newGene_17056","--",0.552057,39,0.431873,47,0.549548,49,1.689597,134,2.027999,143,1.645288,130,{"v":4.1627465702541e-05,"d":"4.16E-05"},1.49316294477372,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","uncharacterized protein LOC106408085 [Brassica napus]","--"]
["Bra023678","Bra023678",2.688992,250,1.699922,166,2.455398,217,6.793954,453,8.145932,527,8.530694,564,{"v":2.9696861202189e-06,"d":"2.97E-06"},1.22704884887266,"up","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: iron ion transport (GO:0006826);; Molecular Function: 3'-5' exonuclease activity (GO:0008408);; Molecular Function: glycogenin glucosyltransferase activity (GO:0008466);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: tissue development (GO:0009888);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: glucuronoxylan biosynthetic process (GO:0010417);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: membrane (GO:0016020);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Molecular Function: glucuronoxylan glucuronosyltransferase activity (GO:0080116);; ","--","--","[G]","Carbohydrate transport and metabolism","Glycosyl transferase family 8","Inositol phosphorylceramide glucuronosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=IPUT1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020)"]
["Bra014139","Bra014139",1.495217,101,1.823377,125,2.290633,143,6.686943,316,7.747085,343,7.723063,349,{"v":4.0070845898204e-05,"d":"4.01E-05"},1.35184383108529,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast envelope (GO:0009941);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103833001 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422)"]
["Bra017460","Bra017460",25.899139,794,41.253849,1277,45.967167,1304,11.059777,240,8.008344,168,5.720061,121,{"v":1.06252085757336e-10,"d":"1.06E-10"},-2.67830442788005,"down","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103839499 [Brassica rapa] ","--"]
["Bra034806","Bra034806",21.944098,1993,30.437271,2789,30.706587,2580,13.365557,859,12.636513,782,13.436145,836,{"v":1.61542397850904e-09,"d":"1.62E-09"},-1.62454458197161,"down","[D]","Cell cycle control, cell division, chromosome partitioning","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: MAPK cascade (GO:0000165);; Biological Process: immune system process (GO:0002376);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: ligase activity (GO:0016874);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: single-organism transport (GO:0044765);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to other organism (GO:0051707);; Biological Process: protein autoubiquitination (GO:0051865);; Biological Process: organic substance transport (GO:0071702);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","--","U-box domain","E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Bra012439","Bra012439",8.650623,376,10.132872,446,11.771207,475,8.089495,249,6.611504,197,6.403138,191,0.000426162266236606,-1.08126340089573,"down","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: RNA binding (GO:0003723);; Molecular Function: endoribonuclease activity (GO:0004521);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: aging (GO:0007568);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Molecular Function: ribonuclease T2 activity (GO:0033897);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular catabolic process (GO:0044248);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: nucleic acid metabolic process (GO:0090304);; ","K01166|1.99439e-167|brp:103829206|K01166 ribonuclease T2 [EC:3.1.27.1] | (RefSeq) ribonuclease 3","--","[A]","RNA processing and modification","Ribonuclease T2 family","Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1","S","Function unknown","PREDICTED: ribonuclease 3 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226)"]
["Bra037849","Bra037849",12.531916,803,41.769779,2699,44.781689,2653,2.277379,104,1.059228,47,1.03991,46,{"v":6.92042064766444e-16,"d":"6.92E-16"},-4.7527320993266,"down","--","--","Biological Process: defense response to nematode (GO:0002215);; Molecular Function: peroxidase activity (GO:0004601);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: steroid biosynthetic process (GO:0006694);; Biological Process: iron ion transport (GO:0006826);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: flower development (GO:0009908);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: heme binding (GO:0020037);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: alcohol biosynthetic process (GO:0046165);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00430|0|brp:103837614|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 73","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 73 OS=Arabidopsis thaliana OX=3702 GN=PER73 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 73 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra031069","Bra031069",14.347824,908,29.749437,1899,20.200117,1182,5.969159,268,3.11076,134,1.738478,76,{"v":4.8582141180817e-08,"d":"4.86E-08"},-2.97718145661422,"down","--","--","Biological Process: defense response to insect (GO:0002213);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of translation (GO:0006417);; Biological Process: cell adhesion (GO:0007155);; Cellular Component: plastid (GO:0009536);; Biological Process: response to wounding (GO:0009611);; Biological Process: phototropism (GO:0009638);; Biological Process: response to ethylene (GO:0009723);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to chitin (GO:0010200);; Biological Process: leaf vascular tissue pattern formation (GO:0010305);; Biological Process: lateral root formation (GO:0010311);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: membrane (GO:0016020);; Biological Process: RNA interference (GO:0016246);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: actin nucleation (GO:0045010);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: leaf development (GO:0048366);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: plant ovule development (GO:0048481);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","AP2 domain;; AUX/IAA family","Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana OX=3702 GN=ERF017 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF017-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological adhesion (GO:0022610);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152)"]
["Bra033733","Bra033733",11.215867,865,11.305298,904,10.540161,765,1.480128,99,0.470772,42,0.10875,14,{"v":5.76611599227417e-10,"d":"5.77E-10"},-3.80836782527202,"down","[H]","Coenzyme transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: O-methyltransferase activity (GO:0008171);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: luteolin O-methyltransferase activity (GO:0030744);; Molecular Function: quercetin 3-O-methyltransferase activity (GO:0030755);; Biological Process: methylation (GO:0032259);; Molecular Function: myricetin 3'-O-methyltransferase activity (GO:0033799);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: caffeate O-methyltransferase activity (GO:0047763);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","K13066|0|brp:103827916|K13066 caffeic acid 3-O-methyltransferase [EC:2.1.1.68] | (RefSeq) indole glucosinolate O-methyltransferase 4-like","Phenylpropanoid biosynthesis (ko00940)","[R]","General function prediction only","O-methyltransferase;; Dimerisation domain","Indole glucosinolate O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=IGMT1 PE=1 SV=1","S","Function unknown","PREDICTED: indole glucosinolate O-methyltransferase 4-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra024024","Bra024024",1.916686,121,0.891598,49,1.24465,75,7.351626,267,8.20607,314,7.416037,314,{"v":3.75551780001354e-06,"d":"3.76E-06"},1.79901025560163,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","[T]","Signal transduction mechanisms","Protein of unknown function (DUF1997)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103862030 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra033494","Bra033494",42.205215,3914,34.881546,3265,31.881525,2736,152.96637,10036,187.894394,11867,173.478516,11024,{"v":5.38304800812819e-29,"d":"5.38E-29"},1.68741954832213,"up","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to UV (GO:0009411);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: cell plate formation involved in plant-type cell wall biogenesis (GO:0009920);; Biological Process: response to inorganic substance (GO:0010035);; Molecular Function: abscisic acid glucosyltransferase activity (GO:0010294);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; Biological Process: cellular response to abiotic stimulus (GO:0071214);; Molecular Function: UDP-glucose:4-aminobenzoate acylglucosyltransferase activity (GO:0080002);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 75D1 OS=Arabidopsis thaliana OX=3702 GN=UGT75D1 PE=2 SV=2","S","Function unknown","PREDICTED: UDP-glycosyltransferase 75D1-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824)"]
["Bra028660","Bra028660",3.983677,346,8.160742,727,8.361906,683,31.24197,1900,65.788382,3910,60.741525,3652,{"v":2.20940954847966e-06,"d":"2.21E-06"},2.25052128628296,"up","[G]","Carbohydrate transport and metabolism","Biological Process: oligosaccharide metabolic process (GO:0009311);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: glycoside catabolic process (GO:0016139);; Biological Process: single-organism process (GO:0044699);; Biological Process: glycosylceramide catabolic process (GO:0046477);; Cellular Component: apoplast (GO:0048046);; Molecular Function: raffinose alpha-galactosidase activity (GO:0052692);; ","K07407|0|brp:103850695|K07407 alpha-galactosidase [EC:3.2.1.22] | (RefSeq) alpha-galactosidase 1","Galactose metabolism (ko00052);; Glycerolipid metabolism (ko00561);; Sphingolipid metabolism (ko00600);; Glycosphingolipid biosynthesis - globo series (ko00603)","[G]","Carbohydrate transport and metabolism","Alpha galactosidase A;; Melibiase","Alpha-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=AGAL1 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: alpha-galactosidase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; cellular component: extracellular region (GO:0005576);; molecular function: catalytic activity (GO:0003824)"]
["Bra007243","Bra007243",32.408564,1977,42.878483,2621,51.41318,2857,22.237542,952,23.322236,963,22.552888,955,{"v":6.29424780262127e-07,"d":"6.29E-07"},-1.43483181279109,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to hypoxia (GO:0001666);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to insect (GO:0009625);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: induced systemic resistance, jasmonic acid mediated signaling pathway (GO:0009864);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to nutrient levels (GO:0031667);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 70 OS=Arabidopsis thaliana OX=3702 GN=WRKY70 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 70 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704)"]
["Brassica_rapa_newGene_26387","--",48.433014,2080,35.044697,1519,32.544258,1293,26.784025,814,13.126781,384,15.68448,462,{"v":1.06440684311149e-05,"d":"1.06E-05"},-1.56181742989203,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11253|1.5099e-78|crb:CARUB_v10021660mg|K11253 histone H3 | (RefSeq) hypothetical protein","--","[B]","Chromatin structure and dynamics","Core histone H2A/H2B/H3/H4","Histone H3.2 OS=Triticum aestivum OX=4565 PE=1 SV=2","B","Chromatin structure and dynamics","hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra026963","Bra026963",118.883812,4752,202.365677,8162,136.609146,5051,45.57753,1289,10.260126,280,11.094894,304,{"v":5.53289979566884e-07,"d":"5.53E-07"},-3.10881154479602,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plastid (GO:0009536);; Biological Process: cold acclimation (GO:0009631);; Biological Process: response to salt stress (GO:0009651);; Biological Process: regulation of gibberellin biosynthetic process (GO:0010371);; Biological Process: cell growth (GO:0016049);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: response to freezing (GO:0050826);; ","--","--","--","--","AP2 domain","Dehydration-responsive element-binding protein 1F OS=Arabidopsis thaliana OX=3702 GN=DREB1F PE=2 SV=1","K","Transcription","PREDICTED: dehydration-responsive element-binding protein 1F-like [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra004821","Bra004821",14.335467,1640,55.475361,6401,50.163052,5306,0.65194,53,0.127502,10,0.40617,32,{"v":1.26290569444826e-23,"d":"1.26E-23"},-6.6247415100722,"down","--","--","Biological Process: response to oxidative stress (GO:0006979);; ","--","--","--","--","Neprosin;; Neprosin activation peptide","--","--","--","PREDICTED: uncharacterized protein LOC103866782 [Brassica rapa] ","biological process: response to stimulus (GO:0050896)"]
["Bra036642","Bra036642",21.007631,959,46.279197,2150,51.520136,2142,5.175972,158,9.250119,276,11.809464,353,{"v":8.85916680926363e-08,"d":"8.86E-08"},-2.70354019094898,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: superoxide dismutase activity (GO:0004784);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: cytosol (GO:0005829);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: intracellular copper ion transport (GO:0015680);; Molecular Function: superoxide dismutase copper chaperone activity (GO:0016532);; Biological Process: removal of superoxide radicals (GO:0019430);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: oxidation-reduction process (GO:0055114);; ","K04569|5.98408e-161|bna:106368861|K04569 copper chaperone for superoxide dismutase | (RefSeq) copper chaperone for superoxide dismutase, chloroplastic/cytosolic-like","--","[P]","Inorganic ion transport and metabolism","Copper/zinc superoxide dismutase (SODC)","Copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Arabidopsis thaliana OX=3702 GN=CCS PE=1 SV=1","S","Function unknown","PREDICTED: copper chaperone for superoxide dismutase, chloroplastic/cytosolic-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: localization (GO:0051179);; molecular function: metallochaperone activity (GO:0016530);; molecular function: enzyme regulator activity (GO:0030234);; biological process: response to stimulus (GO:0050896)"]
["Bra005042","Bra005042",3.724505,225,10.05445,613,9.042752,505,0,0,0,0,0,0,{"v":3.39256658142179e-22,"d":"3.39E-22"},-8.61647030376884,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: defense response (GO:0006952);; Biological Process: lignan biosynthetic process (GO:0009807);; Biological Process: suberin biosynthetic process (GO:0010345);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: root hair cell differentiation (GO:0048765);; ","--","--","--","--","Dirigent-like protein","Dirigent protein 9 OS=Arabidopsis thaliana OX=3702 GN=DIR9 PE=2 SV=1","S","Function unknown","PREDICTED: dirigent protein 9 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra000214","Bra000214",563.321655,16394,636.695312,18698,634.926453,17093,163.080444,3358,14.483427,288,171.611221,3423,0.000242765952534998,-2.6719490020101,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Biological Process: detection of calcium ion (GO:0005513);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: pollen germination (GO:0009846);; Biological Process: regulation of photomorphogenesis (GO:0010099);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: protein catabolic process (GO:0030163);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: oxidation-reduction process (GO:0055114);; ","K02183|1.05954e-103|crb:CARUB_v10024013mg|K02183 calmodulin | (RefSeq) hypothetical protein","Phosphatidylinositol signaling system (ko04070);; Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain pair;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region;; EF-hand domain;; Ca2+ insensitive EF hand","Calmodulin-5 OS=Arabidopsis thaliana OX=3702 GN=CAM5 PE=1 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","hypothetical protein CDL15_Pgr003035 [Punica granatum]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; molecular function: catalytic activity (GO:0003824);; biological process: localization (GO:0051179)"]
["Bra008066","Bra008066",104.66684,5950,185.818008,10660,195.100128,10260,36.439541,1466,42.235077,1635,45.458599,1771,{"v":1.45663811965281e-12,"d":"1.46E-12"},-2.49349476496122,"down","--","--","Molecular Function: endopeptidase activity (GO:0004175);; Molecular Function: inorganic diphosphatase activity (GO:0004427);; Cellular Component: nucleus (GO:0005634);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: dephosphorylation (GO:0016311);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: protein tetramerization (GO:0051262);; Molecular Function: phosphocholine phosphatase activity (GO:0052731);; Molecular Function: phosphoethanolamine phosphatase activity (GO:0052732);; ","K13248|0|brp:103852818|K13248 pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74] | (RefSeq) inorganic pyrophosphatase 1","Vitamin B6 metabolism (ko00750)","[R]","General function prediction only","Putative Phosphatase;; haloacid dehalogenase-like hydrolase","Inorganic pyrophosphatase 1 OS=Arabidopsis thaliana OX=3702 GN=PS2 PE=1 SV=1","S","Function unknown","PREDICTED: inorganic pyrophosphatase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra018443","Bra018443",3.674706,250,2.176249,150,2.186373,138,7.261304,349,9.420324,436,8.617049,401,0.000175992286623559,1.10269329438367,"up","[O]","Posttranslational modification, protein turnover, chaperones","Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein folding (GO:0006457);; Molecular Function: heat shock protein binding (GO:0031072);; Molecular Function: unfolded protein binding (GO:0051082);; ","K09510|0|brp:103868099|K09510 DnaJ homolog subfamily B member 4 | (RefSeq) dnaJ homolog subfamily B member 1","--","[O]","Posttranslational modification, protein turnover, chaperones","DnaJ C terminal domain;; DnaJ domain","DnaJ protein homolog OS=Cucumis sativus OX=3659 GN=DNAJ1 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: dnaJ homolog subfamily B member 1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)"]
["Bra001410","Bra001410",5.20196,689,4.036396,524,4.47543,570,3.762117,264,2.553518,159,1.98584,154,{"v":1.10714920097147e-07,"d":"1.11E-07"},-1.64972732770452,"down","--","--","--","--","--","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; PMR5 N terminal Domain","Protein trichome birefringence-like 8 OS=Arabidopsis thaliana OX=3702 GN=TBL8 PE=2 SV=1","S","Function unknown","PREDICTED: protein trichome birefringence-like 8 [Brassica rapa]","--"]
["Bra022040","Bra022040",7.686044,373,8.910358,357,8.827489,327,5.640224,142,2.34415,63,3.381618,89,{"v":1.51412940227377e-06,"d":"1.51E-06"},-1.85407119687523,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","AWPM-19-like family","Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103853714 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra024989","Bra024989",46.672623,2454,47.435665,2517,50.594952,2461,37.044807,1378,25.481937,913,32.435146,1169,{"v":1.18109625186127e-06,"d":"1.18E-06"},-1.15304002721122,"down","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cell morphogenesis (GO:0000902);; Biological Process: regulation of cell shape during vegetative growth phase (GO:0000903);; Biological Process: cytokinesis (GO:0000910);; Molecular Function: SNAP receptor activity (GO:0005484);; Cellular Component: nucleus (GO:0005634);; Cellular Component: late endosome (GO:0005770);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: amino acid transport (GO:0006865);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: Golgi to vacuole transport (GO:0006896);; Biological Process: membrane fusion (GO:0006944);; Biological Process: Golgi organization (GO:0007030);; Biological Process: vacuole organization (GO:0007033);; Biological Process: protein secretion (GO:0009306);; Cellular Component: cell plate (GO:0009504);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to bacterium (GO:0009617);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: amyloplast organization (GO:0009660);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative gravitropism (GO:0009959);; Biological Process: stomatal movement (GO:0010118);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: transpiration (GO:0010148);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cell growth (GO:0016049);; Biological Process: endosomal transport (GO:0016197);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Cellular Component: trans-Golgi network transport vesicle (GO:0030140);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: protein anchor (GO:0043495);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: small molecule biosynthetic process (GO:0044283);; Biological Process: late endosome to vacuole transport (GO:0045324);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: negative regulation of cellular defense response (GO:0051245);; Biological Process: callose deposition in cell wall (GO:0052543);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: maintenance of protein location in plasma membrane (GO:0072660);; Biological Process: protein localization to plasma membrane (GO:0072661);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of defense response to fungus (GO:1900150);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","Syntaxin-like protein;; SNARE domain;; Syntaxin","Syntaxin-22 OS=Arabidopsis thaliana OX=3702 GN=SYP22 PE=1 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: syntaxin-22 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; cellular component: cell junction (GO:0030054);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007)"]
["Bra017432","Bra017432",0.090921,12,0,0,0.09995,13,3.617456,333,8.471145,759,6.497516,576,{"v":4.16845478713974e-12,"d":"4.17E-12"},5.30383175276618,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: iron ion transport (GO:0006826);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: detection of gravity (GO:0009590);; Biological Process: positive gravitropism (GO:0009958);; Biological Process: negative gravitropism (GO:0009959);; Biological Process: circumnutation (GO:0010031);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: lateral root development (GO:0048527);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: regulation of starch metabolic process (GO:2000904);; ","--","--","[R]","General function prediction only","--","Protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1","S","Function unknown","PREDICTED: protein SHOOT GRAVITROPISM 5-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502)"]
["Bra029407","Bra029407",0.957157,100,1.182381,107,1.167232,107,3.80998,267,11.074121,702,9.944643,656,{"v":2.00641037187871e-06,"d":"2.01E-06"},2.22845591114517,"up","[T]","Signal transduction mechanisms","Molecular Function: phosphorelay response regulator activity (GO:0000156);; Biological Process: phosphorelay signal transduction system (GO:0000160);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to ethylene (GO:0009723);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: circumnutation (GO:0010031);; Biological Process: regulation of root meristem growth (GO:0010082);; Biological Process: response to red light (GO:0010114);; Biological Process: response to far red light (GO:0010218);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: pigment metabolic process (GO:0042440);; Biological Process: regulation of circadian rhythm (GO:0042752);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: shoot system development (GO:0048367);; Biological Process: long-day photoperiodism, flowering (GO:0048574);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: nuclear import (GO:0051170);; Biological Process: cellular response to cytokinin stimulus (GO:0071368);; Biological Process: regulation of reproductive process (GO:2000241);; ","K12130|0|brp:103854859|K12130 pseudo-response regulator 5 | (RefSeq) two-component response regulator-like APRR5","Circadian rhythm - plant (ko04712)","[K]","Transcription","Response regulator receiver domain;; CCT motif","Two-component response regulator-like APRR5 OS=Arabidopsis thaliana OX=3702 GN=APRR5 PE=1 SV=2","K","Transcription","PREDICTED: two-component response regulator-like APRR5 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: localization (GO:0051179)"]
["Bra004159","Bra004159",3.932851,444,3.569447,407,4.347973,454,9.935725,793,12.115769,931,13.27683,1026,{"v":1.4497193220132e-05,"d":"1.45E-05"},1.01000528912573,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: leaf senescence (GO:0010150);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: cellular response to oxidative stress (GO:0034599);; Biological Process: reactive oxygen species metabolic process (GO:0072593);; ","--","--","--","--","--","Senescence-associated protein AAF, chlorolplastic OS=Arabidopsis thaliana OX=3702 GN=AAF PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103831097 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra033225","Bra033225",9.613114,2733,8.414365,2464,9.611009,2527,5.070371,1020,3.778449,748,3.986931,794,{"v":5.00007615558563e-17,"d":"5.00E-17"},-1.63656522130722,"down","[I]","Lipid transport and metabolism","Molecular Function: phospholipase D activity (GO:0004630);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: phosphatidylinositol-4,5-bisphosphate binding (GO:0005546);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to aluminum ion (GO:0010044);; Cellular Component: membrane (GO:0016020);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: phosphatidylcholine catabolic process (GO:0034638);; Biological Process: membrane lipid catabolic process (GO:0046466);; Biological Process: phosphatidylcholine metabolic process (GO:0046470);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290);; ","K01115|0|brp:103844688|K01115 phospholipase D1/2 [EC:3.1.4.4] | (RefSeq) phospholipase D beta 1","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565);; Endocytosis (ko04144)","[I]","Lipid transport and metabolism","Phospholipase D C terminal;; C2 domain;; Phospholipase D Active site motif;; PLD-like domain","Phospholipase D beta 1 OS=Arabidopsis thaliana OX=3702 GN=PLDBETA1 PE=1 SV=4","I","Lipid transport and metabolism","PREDICTED: phospholipase D beta 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987)"]
["Bra026617","Bra026617",0.495655,57,0.702388,82,0.706901,75,3.328853,271,6.535774,511,6.8483,539,{"v":1.30555532791046e-08,"d":"1.31E-08"},2.47407521140675,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of translation (GO:0006417);; Biological Process: ion transport (GO:0006811);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: plastid organization (GO:0009657);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular response to stress (GO:0033554);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: root development (GO:0048364);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: regulation of cell division (GO:0051302);; ","--","--","[R]","General function prediction only","Zinc finger, C2H2 type;; Zinc-finger double-stranded RNA-binding","Protein indeterminate-domain 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IDD5 PE=1 SV=1","S","Function unknown","PREDICTED: protein indeterminate-domain 5, chloroplastic-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra010820","Bra010820",4.365536,389,7.102562,582,6.90952,567,4.155094,235,0.859182,56,1.056816,67,0.00130666805681611,-2.04278140340887,"down","[IR]","Lipid transport and metabolism;; General function prediction only","Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Biological Process: water transport (GO:0006833);; Cellular Component: chloroplast thylakoid (GO:0009534);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: response to metal ion (GO:0010038);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: cuticle development (GO:0042335);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Cellular Component: apoplast (GO:0048046);; Molecular Function: cutinase activity (GO:0050525);; Cellular Component: pollen tube (GO:0090406);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana OX=3702 GN=At1g29670 PE=2 SV=1","S","Function unknown","PREDICTED: GDSL esterase/lipase At1g29670 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: localization (GO:0051179);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra040948","Bra040948",0.756043,39,0.948298,50,1.262487,60,4.426538,161,10.095214,353,9.383368,330,{"v":2.72865211643913e-06,"d":"2.73E-06"},2.32556659751778,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoskeleton (GO:0005856);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: animal organ development (GO:0048513);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; ","--","--","--","--","Transcriptional repressor, ovate;; DNA-binding domain","Transcription repressor OFP1 OS=Arabidopsis thaliana OX=3702 GN=OFP1 PE=1 SV=1","S","Function unknown","PREDICTED: transcription repressor OFP1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502)"]
["Bra035702","Bra035702",2.267677,52,0.637581,15,0.85584,18,13.84745,221,24.660746,378,29.638845,458,{"v":5.69286929099724e-10,"d":"5.69E-10"},3.44350355760086,"up","--","--","Cellular Component: anchored component of membrane (GO:0031225);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103864887 [Brassica rapa]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra008341","Bra008341",12.681807,404,5.616212,181,8.89408,262,33.701683,759,70.817131,1535,61.473423,1341,{"v":1.11868529095925e-06,"d":"1.12E-06"},2.0191186509875,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","zinc-finger of the FCS-type, C2-C2","Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein LOC103853106 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Brassica_rapa_newGene_27050","--",1.367697,152,1.092832,122,1.284518,151,0.62784,54,0.477519,43,0.992008,84,0.00452257179189736,-1.24610900159342,"down","--","--","--","--","--","--","--","Domain of unknown function (DUF1985)","--","--","--","uncharacterized protein LOC106407868 [Brassica napus]","--"]
["Bra018515","Bra018515",0.28376,41,0.07372,11,0.242518,24,1.261223,123,2.258558,180,2.359013,217,{"v":3.73204894910347e-06,"d":"3.73E-06"},2.6056334295119,"up","--","--","--","--","--","--","--","--","--","--","--","BnaA01g27080D [Brassica napus]","--"]
["Bra028885","Bra028885",0.694105,87,1.759771,203,2.965595,304,0,0,0,0,0,0,{"v":6.05482209154316e-15,"d":"6.05E-15"},-7.45417469963089,"down","[DPM]","Cell cycle control, cell division, chromosome partitioning;; Inorganic ion transport and metabolism;; Cell wall/membrane/envelope biogenesis","Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Biological Process: iron ion transport (GO:0006826);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: lignin catabolic process (GO:0046274);; Biological Process: response to copper ion (GO:0046688);; Cellular Component: apoplast (GO:0048046);; Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);; Biological Process: oxidation-reduction process (GO:0055114);; ","K05909|0|brp:103850435|K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-8-like","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","Laccase-8 OS=Arabidopsis thaliana OX=3702 GN=LAC8 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: laccase-8-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824)"]
["Bra028219","Bra028219",4.066672,700,1.534594,267,1.622748,259,6.19278,754,10.389952,1217,10.202877,1202,0.00343937261527056,1.33556501785331,"up","--",null,"Biological Process: MAPK cascade (GO:0000165);; Biological Process: cell morphogenesis (GO:0000902);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: ion transport (GO:0006811);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: meiosis I (GO:0007127);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: pollen tube reception (GO:0010483);; Cellular Component: apical plasma membrane (GO:0016324);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Cellular Component: filiform apparatus (GO:0043680);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: chromosome organization (GO:0051276);; Biological Process: regulation of unidimensional cell growth (GO:0051510);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Cellular Component: pollen tube tip (GO:0090404);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain;; Carbohydrate-binding protein of the ER;; Di-glucose binding within endoplasmic reticulum","Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: putative receptor-like protein kinase At5g39000 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: reproduction (GO:0000003);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; cellular component: membrane part (GO:0044425)"]
["Bra028290","Bra028290",18.734797,804,51.681248,2237,34.594902,1373,0.136432,5,2.914392,86,2.931084,87,{"v":3.78566009051459e-07,"d":"3.79E-07"},-4.10743213352541,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to heat (GO:0009408);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plastid (GO:0009536);; Biological Process: cold acclimation (GO:0009631);; Biological Process: response to salt stress (GO:0009651);; Biological Process: regulation of gibberellin biosynthetic process (GO:0010371);; Biological Process: cell growth (GO:0016049);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: response to freezing (GO:0050826);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","AP2 domain","Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1","K","Transcription","PREDICTED: dehydration-responsive element-binding protein 1D [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)"]
["Bra012346","Bra012346",206.039116,10693,175.09211,9251,257.462414,8362,116.158043,4424,68.393353,2493,71.640932,2698,{"v":1.01109930965247e-08,"d":"1.01E-08"},-1.58572690779069,"down","[C]","Energy production and conversion","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: mitochondrial intermembrane space (GO:0005758);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glucose catabolic process (GO:0006007);; Biological Process: cell proliferation (GO:0008283);; Molecular Function: electron carrier activity (GO:0009055);; Molecular Function: heme binding (GO:0020037);; Biological Process: electron transport chain (GO:0022900);; Cellular Component: respiratory chain (GO:0070469);; ","K08738|2.16007e-78|brp:103829307|K08738 cytochrome c | (RefSeq) cytochrome c","Sulfur metabolism (ko00920)","[C]","Energy production and conversion","Cytochrome c;; Cytochrome C oxidase, cbb3-type, subunit III","Cytochrome c OS=Brassica oleracea OX=3712 PE=1 SV=1","C","Energy production and conversion","PREDICTED: cytochrome c [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: electron carrier activity (GO:0009055);; biological process: cellular process (GO:0009987);; cellular component: membrane part (GO:0044425)"]
["Bra027198","Bra027198",71.287672,12446,122.575262,21777,131.055132,20809,95.940532,12019,38.827006,4568,39.998688,4891,0.00622683526121881,-1.39113236661946,"down","--","--","Biological Process: tryptophan biosynthetic process (GO:0000162);; Biological Process: MAPK cascade (GO:0000165);; Molecular Function: tryptophan synthase activity (GO:0004834);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Biological Process: mismatch repair (GO:0006298);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: gravitropism (GO:0009630);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: response to salt stress (GO:0009651);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: ER body (GO:0010168);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: detection of bacterium (GO:0016045);; Molecular Function: mismatched DNA binding (GO:0030983);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Cellular Component: cell part (GO:0044464);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: ER body organization (GO:0080119);; ","--","--","--","--","Stealth protein CR3, conserved region 3","TSA1-like protein OS=Arabidopsis thaliana OX=3702 GN=NAI2 PE=1 SV=1","S","Function unknown","PREDICTED: TSA1-like protein isoform X4 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra016381","Bra016381",147.88323,15080,176.116,18151,173.90436,16487,59.849181,4322,42.439161,2950,42.277579,2961,{"v":2.00594861737651e-19,"d":"2.01E-19"},-2.32051000754548,"down","[E]","Amino acid transport and metabolism","Molecular Function: 3-deoxy-7-phosphoheptulonate synthase activity (GO:0003849);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: chorismate biosynthetic process (GO:0009423);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: coumarin biosynthetic process (GO:0009805);; Cellular Component: membrane (GO:0016020);; Molecular Function: lyase activity (GO:0016829);; Biological Process: shikimate biosynthetic process (GO:0033587);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; ","K01626|0|brp:103835703|K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] | (RefSeq) phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)","--","--","Class-II DAHP synthetase family","Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum OX=4097 GN=DHAPS-1 PE=2 SV=1","E","Amino acid transport and metabolism","PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; cellular component: membrane (GO:0016020)"]
["Bra017517","Bra017517",4.404162,112,8.749221,223,9.860689,231,0,0,0,0,0,0,{"v":2.60256483500839e-16,"d":"2.60E-16"},-7.59866989720632,"down","--","--","--","--","--","--","--","Hydrophobic seed protein;; Protease inhibitor/seed storage/LTP family;; Probable lipid transfer","pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1","--","--","PREDICTED: 14 kDa proline-rich protein DC2.15-like [Brassica rapa] ","--"]
["Bra009590","Bra009590",4.620527,98,5.25692,113,5.569468,109,2.211707,34,0.656381,10,0.629017,10,0.000164211589787153,-2.44500396386788,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 GN=SMR3 PE=1 SV=1","S","Function unknown","PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra005444","Bra005444",0.292588,16,0.507883,30,0.266717,15,2.368806,92,3.071967,109,2.819194,106,{"v":1.35007989042543e-05,"d":"1.35E-05"},2.17571390660465,"up","--","--","--","--","--","[A]","RNA processing and modification","RING-variant domain","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103867474 [Brassica rapa]","--"]
["Bra028883","Bra028883",1.369877,160,0.743814,95,0.422762,48,5.071659,421,6.784382,535,6.340338,541,{"v":2.2508728998426e-07,"d":"2.25E-07"},2.23327095482484,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: DNA methylation (GO:0006306);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: sulfur compound metabolic process (GO:0006790);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: response to hormone (GO:0009725);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: maintenance of floral meristem identity (GO:0010076);; Biological Process: maintenance of inflorescence meristem identity (GO:0010077);; Biological Process: fruit development (GO:0010154);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: inflorescence development (GO:0010229);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: floral whorl morphogenesis (GO:0048457);; Biological Process: plant ovule development (GO:0048481);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: animal organ formation (GO:0048645);; Biological Process: cofactor metabolic process (GO:0051186);; Biological Process: internode patterning (GO:0080006);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[K]","Transcription","Associated with HOX;; Homeobox KN domain;; Homeobox domain","BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=BLH9 PE=1 SV=1","K","Transcription","PREDICTED: BEL1-like homeodomain protein 9 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra009813","Bra009813",0.571446,108,0.465288,72,0.410349,69,1.254923,138,1.568181,178,1.878575,218,0.00449013597780301,1.04780684995118,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: nuclear-transcribed mRNA catabolic process (GO:0000956);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleus (GO:0005634);; Biological Process: transcription from RNA polymerase II promoter (GO:0006366);; Biological Process: mRNA processing (GO:0006397);; Biological Process: regulation of mitotic cell cycle (GO:0007346);; Biological Process: RNA splicing (GO:0008380);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: tissue development (GO:0009888);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: positive regulation of organelle organization (GO:0010638);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Cellular Component: intracellular part (GO:0044424);; Biological Process: xylan biosynthetic process (GO:0045492);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K12842|2.42963e-120|brp:103874373|K12842 U2-associated protein SR140 | (RefSeq) protein RRC1","Spliceosome (ko03040)","[R]","General function prediction only","--","Protein RRC1 OS=Arabidopsis thaliana OX=3702 GN=RRC1 PE=1 SV=1","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: protein RRC1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra019505","Bra019505",1.971067,225,1.151028,133,1.205374,127,3.361793,271,4.361779,338,5.209038,406,0.00256307825206262,1.02462921985766,"up","--","--","--","--","--","[R]","General function prediction only","PPR repeat;; DYW family of nucleic acid deaminases;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Brassica rapa]","--"]
["Brassica_rapa_newGene_19639","--",2.935123,178,0.600907,37,1.026102,70,5.49002,267,5.498726,261,7.067325,353,0.00896906381258758,1.54719749801715,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra026822","Bra026822",1.040271,114,2.870345,332,2.842043,309,0.253709,22,0.207002,21,0.335936,29,{"v":2.55308175507606e-08,"d":"2.55E-08"},-3.27405595723974,"down","--","--","Biological Process: defense response to nematode (GO:0002215);; Molecular Function: peroxidase activity (GO:0004601);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: flower development (GO:0009908);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to hypoxia (GO:0071456);; ","K00430|0|brp:103842960|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 4-like","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 4 OS=Arabidopsis thaliana OX=3702 GN=PER4 PE=3 SV=1","--","--","PREDICTED: LOW QUALITY PROTEIN: peroxidase 4-like [Brassica rapa]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular process (GO:0009987)"]
["Bra017989","Bra017989",5.919078,732,10.938542,1458,10.550929,1347,4.294189,458,2.823169,242,6.076278,494,0.000766231367705811,-1.59685178948857,"down","[T]","Signal transduction mechanisms","Molecular Function: calmodulin-dependent protein kinase activity (GO:0004683);; Molecular Function: calcium-dependent protein serine/threonine phosphatase activity (GO:0004723);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: amino acid transport (GO:0006865);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: protein autophosphorylation (GO:0046777);; ","K00924|0|brp:103873063|K00924 [EC:2.7.1.-] | (RefSeq) CDPK-related kinase 6","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase;; Lipopolysaccharide kinase (Kdo/WaaP) family;; Phosphotransferase enzyme family","CDPK-related kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: CDPK-related kinase 6 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra030712","Bra030712",10.324927,1226,23.163424,2776,20.175138,2216,4.873705,410,4.254606,345,3.733393,304,{"v":5.23787101812775e-10,"d":"5.24E-10"},-2.56499746309967,"down","[R]","General function prediction only","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to cold (GO:0009409);; Biological Process: cytokinin metabolic process (GO:0009690);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","von Willebrand factor type A domain;; VWA / Hh  protein intein-like;; von Willebrand factor type A domain;; von Willebrand factor type A domain;; RING-like zinc finger;; Ring finger domain;; VWA domain containing CoxE-like protein;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103836407 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: multi-organism process (GO:0051704)"]
["Bra020428","Bra020428",33.375414,2180,58.596525,3912,64.836885,3929,27.801358,1314,7.972193,364,10.657605,482,0.000121215079245179,-2.18503553688564,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: blue light signaling pathway (GO:0009785);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to UV-B (GO:0010224);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|brp:103851700|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB36-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor MYB36-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: signaling (GO:0023052)"]
["Bra006336","Bra006336",790.714233,41727,524.461548,27929,615.026428,30024,184.557373,6890,55.307705,1988,54.736626,1980,{"v":2.41656297580229e-09,"d":"2.42E-09"},-3.09043193678057,"down","--","--","Molecular Function: 3-oxo-5-alpha-steroid 4-dehydrogenase activity (GO:0003865);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: steroid metabolic process (GO:0008202);; Biological Process: lipid biosynthetic process (GO:0008610);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: membrane part (GO:0044425);; Molecular Function: progesterone 5-alpha-reductase activity (GO:0050213);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: seed trichome initiation (GO:0090377);; Biological Process: seed trichome elongation (GO:0090378);; ","--","--","[I]","Lipid transport and metabolism","3-oxo-5-alpha-steroid 4-dehydrogenase","Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum OX=3635 GN=DET2 PE=1 SV=1","S","Function unknown","PREDICTED: very-long-chain enoyl-CoA reductase-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra020500","Bra020500",0.461809,33,0.217981,16,0.078496,6,1.818266,92,3.298353,160,3.835831,188,{"v":1.86758447544059e-05,"d":"1.87E-05"},2.78985404019057,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","Protein of unknown function (DUF642)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103854751 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)"]
["Bra028448","Bra028448",1.481242,195,1.164628,155,1.558989,190,4.465524,415,5.228738,468,5.599619,504,{"v":1.50510005240008e-07,"d":"1.51E-07"},1.29514471578224,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; Biological Process: plastid organization (GO:0009657);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: developmental process (GO:0032502);; Biological Process: regulation of cellular process (GO:0050794);; ","--","--","[R]","General function prediction only","PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; PPR repeat;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Evolutionarily conserved signalling intermediate in Toll pathway","Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1","S","Function unknown","PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007)"]
["Bra037416","Bra037416",87.815626,6377,208.890178,15309,236.053328,15858,88.934285,4568,56.24748,2782,66.245067,3297,{"v":9.66512805364476e-05,"d":"9.67E-05"},-1.85105971690669,"down","[CP]","Energy production and conversion;; Inorganic ion transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Molecular Function: inorganic diphosphatase activity (GO:0004427);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: Golgi organization (GO:0007030);; Biological Process: signal transduction (GO:0007165);; Biological Process: methionine biosynthetic process (GO:0009086);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Biological Process: lipid storage (GO:0019915);; Cellular Component: chloroplast part (GO:0044434);; Biological Process: innate immune response (GO:0045087);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: response to other organism (GO:0051707);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K01507|1.17058e-156|brp:103836837|K01507 inorganic pyrophosphatase [EC:3.6.1.1] | (RefSeq) soluble inorganic pyrophosphatase 1","Oxidative phosphorylation (ko00190)","[C]","Energy production and conversion","Inorganic pyrophosphatase","Soluble inorganic pyrophosphatase 1 OS=Arabidopsis thaliana OX=3702 GN=PPA1 PE=1 SV=1","C","Energy production and conversion","PREDICTED: soluble inorganic pyrophosphatase 1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra008926","Bra008926",17.12631,1725,37.386715,3798,32.797498,3055,3.762306,268,1.837804,136,1.025368,80,{"v":3.86938825975954e-14,"d":"3.87E-14"},-4.02313730254576,"down","[G]","Carbohydrate transport and metabolism","Biological Process: response to hypoxia (GO:0001666);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: sucrose alpha-glucosidase activity (GO:0004575);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: sucrose biosynthetic process (GO:0005986);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to wounding (GO:0009611);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: levanase activity (GO:0031219);; Molecular Function: inulinase activity (GO:0051670);; Biological Process: response to karrikin (GO:0080167);; ","K01193|0|brp:103846681|K01193 beta-fructofuranosidase [EC:3.2.1.26] | (RefSeq) beta-fructofuranosidase, insoluble isoenzyme CWINV6-like","Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolases family 32 N-terminal domain;; Glycosyl hydrolases family 32 C terminal","Beta-fructofuranosidase, insoluble isoenzyme CWINV6 OS=Arabidopsis thaliana OX=3702 GN=CWINV6 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV6-like isoform X1 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra024843","Bra024843",15.896231,2819,6.697142,1188,6.231455,1004,5.029581,566,4.661077,548,5.300877,612,0.00013958006285627,-1.49144043408603,"down","--","--","Biological Process: polysaccharide catabolic process (GO:0000272);; Biological Process: cytokinesis (GO:0000910);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: microtubule bundle formation (GO:0001578);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: regulation of DNA replication (GO:0006275);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: nucleolus organization (GO:0007000);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: mitotic cell cycle (GO:0007067);; Biological Process: synapsis (GO:0007129);; Biological Process: reciprocal meiotic recombination (GO:0007131);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: pattern specification process (GO:0007389);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: cell proliferation (GO:0008283);; Cellular Component: phragmoplast (GO:0009524);; Cellular Component: plastid (GO:0009536);; Cellular Component: preprophase band (GO:0009574);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to nematode (GO:0009624);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: regulation of flower development (GO:0009909);; Cellular Component: cortical microtubule, transverse to long axis (GO:0010005);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: regulation of G2/M transition of mitotic cell cycle (GO:0010389);; Biological Process: histone phosphorylation (GO:0016572);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: positive regulation of microtubule polymerization (GO:0031116);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: cortical microtubule organization (GO:0043622);; Biological Process: actin nucleation (GO:0045010);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: floral whorl development (GO:0048438);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: spindle assembly (GO:0051225);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: formation by symbiont of syncytium involving giant cell for nutrient acquisition from host (GO:0052096);; Cellular Component: mitotic spindle (GO:0072686);; ","K16732|0|brp:103827541|K16732 protein regulator of cytokinesis 1 | (RefSeq) 65-kDa microtubule-associated protein 6","--","[DZ]","Cell cycle control, cell division, chromosome partitioning;; Cytoskeleton","Microtubule associated protein (MAP65/ASE1 family)","65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana OX=3702 GN=MAP65-6 PE=1 SV=1","S","Function unknown","PREDICTED: 65-kDa microtubule-associated protein 6 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179);; biological process: reproductive process (GO:0022414)"]
["Bra007322","Bra007322",0.335931,17,0.484097,25,0.46214,22,3.500918,144,2.381135,81,2.297778,91,{"v":2.49632265108875e-05,"d":"2.50E-05"},2.13344436260039,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","K15326|4.98929e-175|brp:103841642|K15326 tRNA-splicing endonuclease subunit Sen54 | (RefSeq) uncharacterized LOC103841642","--","[J]","Translation, ribosomal structure and biogenesis","tRNA-splicing endonuclease subunit sen54 N-term","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103841642 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra036073","Bra036073",6.619019,220,16.437645,551,11.5634,355,1.787226,42,1.142437,26,1.269138,29,{"v":1.28442598481732e-11,"d":"1.28E-11"},-3.45300046041771,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","[R]","General function prediction only","Protein of unknown function (DUF1685)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103840945 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra037340","Bra037340",29.595651,6627,16.18359,3651,19.870479,4129,15.439534,2425,13.845472,2107,13.24626,2017,{"v":1.61281973769693e-06,"d":"1.61E-06"},-1.15336155155685,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","Domain of unknown function (DUF4378);; Protein of unknown function (DUF3741)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103836920 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra028321","Bra028321",11.37191,530,10.823279,509,8.826777,381,11.216907,370,82.832916,2627,88.049957,2810,0.00715630350753841,1.84234632476113,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to salt stress (GO:0009651);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; ","--","--","[R]","General function prediction only","Dienelactone hydrolase family","Endo-1,3;1,4-beta-D-glucanase OS=Zea mays OX=4577 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576)"]
["Bra014866","Bra014866",0.907349,48,0.380562,20,0.229434,12,1.540318,57,3.83333,141,3.85265,138,0.00503513878675409,1.92412017009824,"up","--","--","--","--","--","--","--","No apical meristem-associated C-terminal domain","--","S","Function unknown","uncharacterized protein LOC106363088 [Brassica napus]","--"]
["Bra036191","Bra036191",4.898705,204,4.512765,184,4.122901,154,3.834373,111,2.211374,62,3.64432,102,0.00632692593713925,-1.00287675243317,"down","[S]","Function unknown","Biological Process: double-strand break repair via homologous recombination (GO:0000724);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","DNA repair RAD52-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAD52-2 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103837233 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra029715","Bra029715",23.119984,3152,65.884383,7344,57.816524,6008,37.193596,2907,13.835971,1285,14.598455,1364,0.0018240424674917,-1.59679719448478,"down","[U]","Intracellular trafficking, secretion, and vesicular transport","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: autophagy (GO:0006914);; Biological Process: response to fungus (GO:0009620);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: regulation of innate immune response (GO:0045088);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: localization (GO:0051179);; Biological Process: cellular response to stimulus (GO:0051716);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PIX7 OS=Arabidopsis thaliana OX=3702 GN=PIX7 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable receptor-like protein kinase At3g55450 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra018716","Bra018716",3.790961,385,3.745936,374,2.415036,224,2.344914,166,3.237434,146,2.129061,141,0.000120316470490243,-1.13579510910585,"down","[T]","Signal transduction mechanisms","--","K07198|2.36278e-94|bna:106346412|K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11] | (RefSeq) CBL-interacting serine/threonine-protein kinase 17-like","Regulation of autophagy (ko04140)","[T]","Signal transduction mechanisms","Protein kinase domain;; NAF domain;; Protein tyrosine kinase","CBL-interacting serine/threonine-protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CIPK17 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: CBL-interacting serine/threonine-protein kinase 17-like isoform X2 [Brassica oleracea var. oleracea]","--"]
["Bra017321","Bra017321",0.524579,32,0.070707,5,0.405403,23,2.452106,103,2.114031,86,3.758382,153,0.00141976759441259,2.26717695296866,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: RNA binding (GO:0003723);; Biological Process: rRNA processing (GO:0006364);; Biological Process: mRNA processing (GO:0006397);; Molecular Function: poly(U) RNA binding (GO:0008266);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: cold acclimation (GO:0009631);; Biological Process: chloroplast relocation (GO:0009902);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosynthesis (GO:0015979);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Biological Process: base conversion or substitution editing (GO:0016553);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: developmental process (GO:0032502);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: response to chemical (GO:0042221);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: RNA stabilization (GO:0043489);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: single-organism cellular process (GO:0044763);; Biological Process: innate immune response (GO:0045087);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:1900151);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","--","--","[R]","General function prediction only","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; Limkain b1","33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1","S","Function unknown","PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376)"]
["Brassica_rapa_newGene_26040","--",0.880957,65,2.253262,166,3.641933,246,0.603201,32,0,0,0.275997,14,0.00963188919210952,-2.72493852776585,"down","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra008869","Bra008869",4.182898,305,4.516943,332,3.126079,211,3.008635,155,0.717604,36,1.361296,68,0.00583233018773356,-1.65787094928784,"down","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cell wall (GO:0005618);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ion transport (GO:0006811);; Biological Process: defense response (GO:0006952);; Biological Process: signal transduction (GO:0007165);; Biological Process: pattern specification process (GO:0007389);; Biological Process: metabolic process (GO:0008152);; Biological Process: epidermis development (GO:0008544);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to hormone (GO:0009725);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: cell growth (GO:0016049);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: cell differentiation (GO:0030154);; Biological Process: response to lipid (GO:0033993);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: cell wall modification (GO:0042545);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Cellular Component: apoplast (GO:0048046);; Biological Process: gametophyte development (GO:0048229);; Biological Process: stamen development (GO:0048443);; Biological Process: meristem development (GO:0048507);; Biological Process: cell division (GO:0051301);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: regulation of molecular function (GO:0065009);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich Repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=DRT100 PE=2 SV=2","S","Function unknown","PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; molecular function: catalytic activity (GO:0003824);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: extracellular region (GO:0005576);; biological process: reproductive process (GO:0022414)"]
["Bra006668","Bra006668",9.298004,1213,14.583956,1919,15.039068,1814,3.578462,331,2.029202,181,0.667557,60,{"v":5.23425705688861e-07,"d":"5.23E-07"},-2.99642959366973,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Biological Process: defense response to oomycetes (GO:0002229);; Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: membrane fusion (GO:0006944);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: focal adhesion assembly (GO:0048041);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to salt stress (GO:0071472);; ","--","--","--","--","Legume lectin domain;; Protein tyrosine kinase;; Protein kinase domain","Putative L-type lectin-domain containing receptor kinase I.11 OS=Arabidopsis thaliana OX=3702 GN=LECRK111 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: putative L-type lectin-domain containing receptor kinase I.11 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra039926","Bra039926",13.753939,2945,26.996066,4485,40.635841,7270,7.362384,1053,2.975216,363,4.340745,592,{"v":1.28818826797442e-07,"d":"1.29E-07"},-2.83196167523482,"down","--","--","Biological Process: cell fate specification (GO:0001708);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to stress (GO:0006950);; Biological Process: endoplasmic reticulum organization (GO:0007029);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: epidermal cell differentiation (GO:0009913);; Biological Process: stomatal complex development (GO:0010374);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: shoot system development (GO:0048367);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1","--","--","PREDICTED: transcription factor bHLH19-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501)"]
["Bra028675","Bra028675",3.093535,234,2.655909,203,2.623235,181,11.385601,576,8.795622,460,8.785965,449,{"v":1.18080696105237e-08,"d":"1.18E-08"},1.2095218034419,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103850676 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra027812","Bra027812",0.522746,62,0.792688,38,0.148283,18,2.437653,140,2.128267,133,3.975629,243,0.000272476037437995,2.01818599495792,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103838074 [Brassica rapa]","--"]
["Bra029472","Bra029472",15.015394,1047,42.31585,2977,49.521999,3194,10.427872,515,16.655912,791,16.231782,775,0.000728764290429008,-1.80927897070389,"down","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast inner membrane (GO:0009706);; Molecular Function: protochlorophyllide reductase activity (GO:0016630);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Uncharacterised protein family (UPF0041)","Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana OX=3702 GN=MPC3 PE=2 SV=1","S","Function unknown","short-chain dehydrogenase TIC 32, chloroplastic-like [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)"]
["Bra019149","Bra019149",4.785397,410,6.522395,564,5.806394,460,3.751477,228,3.474191,203,3.575036,210,{"v":2.39235096272797e-05,"d":"2.39E-05"},-1.21133591714403,"down","--","--","--","--","--","--","--","--","Uncharacterized protein At1g76660 OS=Arabidopsis thaliana OX=3702 GN=At1g76660 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103861578 [Brassica rapa]","--"]
["Bra027140","Bra027140",78.338742,5915,88.204742,6826,89.262573,6269,62.710043,3399,60.548065,3173,57.212727,3039,{"v":8.47772012761306e-08,"d":"8.48E-08"},-1.04036027891708,"down","[R]","General function prediction only","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: aldo-keto reductase (NADP) activity (GO:0004033);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: ion transport (GO:0006811);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to sucrose (GO:0009744);; Biological Process: coumarin biosynthetic process (GO:0009805);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: protein heterodimerization activity (GO:0046982);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: sucrose induced translational repression (GO:0080149);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","--","--","[C]","Energy production and conversion","Aldo/keto reductase family","Probable aldo-keto reductase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g60710 PE=2 SV=1","C","Energy production and conversion","PREDICTED: probable aldo-keto reductase 4 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; cellular component: organelle part (GO:0044422)"]
["Bra004628","Bra004628",2.741908,268,2.685905,285,4.502683,412,1.240096,66,0.140374,11,0.131067,11,{"v":2.01384759565696e-05,"d":"2.01E-05"},-3.1843692013317,"down","[C]","Energy production and conversion","Molecular Function: glycerol-3-phosphate dehydrogenase [NAD+] activity (GO:0004367);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331);; Biological Process: glycerol-3-phosphate catabolic process (GO:0046168);; Molecular Function: glycerol-3-phosphate dehydrogenase [NAD(P)+] activity (GO:0047952);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00006|0|brp:103866569|K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8] | (RefSeq) glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic-like","Glycerophospholipid metabolism (ko00564)","[C]","Energy production and conversion","NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus;; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus","Glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic OS=Arabidopsis thaliana OX=3702 GN=GPDHC1 PE=2 SV=1","C","Energy production and conversion","PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)"]
["Bra023053","Bra023053",0.096043,17,0.16287,28,0.090007,14,2.05715,245,0.891006,103,0.967277,112,{"v":3.05730056672257e-06,"d":"3.06E-06"},2.72500206931719,"up","[G]","Carbohydrate transport and metabolism","Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: sucrose alpha-glucosidase activity (GO:0004575);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: sucrose biosynthetic process (GO:0005986);; Biological Process: sucrose catabolic process (GO:0005987);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to wounding (GO:0009611);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: nectar secretion (GO:0071836);; Biological Process: response to karrikin (GO:0080167);; ","K01193|0|brp:103857608|K01193 beta-fructofuranosidase [EC:3.2.1.26] | (RefSeq) beta-fructofuranosidase, insoluble isoenzyme CWINV4-like","Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolases family 32 N-terminal domain;; Glycosyl hydrolases family 32 C terminal","Beta-fructofuranosidase, insoluble isoenzyme CWINV4 OS=Arabidopsis thaliana OX=3702 GN=CWINV4 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV4-like [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: organelle (GO:0043226)"]
["Bra013628","Bra013628",122.484745,28581,213.751073,50356,256.896492,55905,71.699747,12153,37.310798,6233,37.893763,6353,{"v":2.62009323119617e-08,"d":"2.62E-08"},-2.45852530281254,"down","[G]","Carbohydrate transport and metabolism","Biological Process: transition metal ion transport (GO:0000041);; Molecular Function: trehalose-phosphatase activity (GO:0004805);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: trehalose biosynthetic process (GO:0005992);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to cadmium ion (GO:0046686);; ","K01087|0|brp:103860163|K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] | (RefSeq) probable trehalose-phosphate phosphatase G","Starch and sucrose metabolism (ko00500)","[G]","Carbohydrate transport and metabolism","Trehalose-phosphatase","Probable trehalose-phosphate phosphatase G OS=Arabidopsis thaliana OX=3702 GN=TPPG PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable trehalose-phosphate phosphatase G [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra031568","Bra031568",3.117753,349,2.675724,300,3.369219,348,1.408631,109,0.712559,58,0.723277,54,{"v":2.98019460384228e-08,"d":"2.98E-08"},-2.17534817510461,"down","--","--","Molecular Function: nucleotide-sugar transmembrane transporter activity (GO:0005338);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: organic anion transport (GO:0015711);; Biological Process: GDP-mannose transport (GO:0015784);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: transmembrane transport (GO:0055085);; ","K15356|0|brp:103843467|K15356 GDP-mannose transporter | (RefSeq) GDP-mannose transporter GONST2","--","[GOU]","Carbohydrate transport and metabolism;; Posttranslational modification, protein turnover, chaperones;; Intracellular trafficking, secretion, and vesicular transport","Triose-phosphate Transporter family","GDP-mannose transporter GONST2 OS=Arabidopsis thaliana OX=3702 GN=GONST2 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: GDP-mannose transporter GONST2 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; cellular component: organelle (GO:0043226)"]
["Brassica_rapa_newGene_31908","--",0.809083,53,0.466321,39,0.493507,38,1.928577,108,2.879594,157,1.749154,84,0.0027176763898643,1.34198117464835,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra034060","Bra034060",835.582084,85393,1501.579684,154806,1508.730179,145436,624.890993,45122,272.456614,18969,271.042381,18978,{"v":3.40373431398193e-06,"d":"3.40E-06"},-2.21836502093408,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: protease binding (GO:0002020);; Molecular Function: glucan exo-1,3-beta-glucosidase activity (GO:0004338);; Molecular Function: beta-galactosidase activity (GO:0004565);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum lumen (GO:0005788);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: aging (GO:0007568);; Molecular Function: beta-glucosidase activity (GO:0008422);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to symbiotic fungus (GO:0009610);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Biological Process: coumarin metabolic process (GO:0009804);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: cell wall modification involved in abscission (GO:0009830);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to nitrate (GO:0010167);; Cellular Component: ER body (GO:0010168);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: pollen exine formation (GO:0010584);; Biological Process: tetracyclic triterpenoid biosynthetic process (GO:0010686);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: fucosidase activity (GO:0015928);; Cellular Component: membrane (GO:0016020);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Molecular Function: thioglucosidase activity (GO:0019137);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Molecular Function: beta-D-fucosidase activity (GO:0033907);; Biological Process: peptidyl-tyrosine dephosphorylation (GO:0035335);; Biological Process: indole glucosinolate catabolic process (GO:0042344);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: negative regulation of MAP kinase activity (GO:0043407);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; Molecular Function: beta-L-arabinosidase activity (GO:0047701);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: petal morphogenesis (GO:0048446);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Molecular Function: phosphatidylinositol phosphate phosphatase activity (GO:0052866);; Molecular Function: phosphatidic acid binding (GO:0070300);; Biological Process: cellular response to cold (GO:0070417);; Biological Process: divalent metal ion transport (GO:0070838);; Biological Process: cellular response to salt stress (GO:0071472);; Molecular Function: baruol synthase activity (GO:0080011);; Molecular Function: beta-gentiobiose beta-glucosidase activity (GO:0080083);; Biological Process: ER body organization (GO:0080119);; Biological Process: response to karrikin (GO:0080167);; ","K01188|0|brp:103848211|K01188 beta-glucosidase [EC:3.2.1.21] | (RefSeq) beta-glucosidase 23-like","Cyanoamino acid metabolism (ko00460);; Starch and sucrose metabolism (ko00500);; Phenylpropanoid biosynthesis (ko00940)","[G]","Carbohydrate transport and metabolism","Glycosyl hydrolase family 1","Beta-glucosidase 23 OS=Arabidopsis thaliana OX=3702 GN=BGLU23 PE=1 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: beta-glucosidase 23-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane (GO:0016020);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414)"]
["Bra039172","Bra039172",265.97879,25234,274.845703,26313,256.357269,22499,156.360794,10495,148.153625,9572,133.34259,8669,{"v":3.01478567666658e-19,"d":"3.01E-19"},-1.41351578310439,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: phosphogluconate dehydrogenase (decarboxylating) activity (GO:0004616);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cytosol (GO:0005829);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Biological Process: regulation of anion channel activity (GO:0010359);; Cellular Component: membrane (GO:0016020);; Biological Process: D-gluconate metabolic process (GO:0019521);; Biological Process: amino acid import (GO:0043090);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: NADP binding (GO:0050661);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K00033|0|brp:103870918|K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] | (RefSeq) 6-phosphogluconate dehydrogenase, decarboxylating 3","Pentose phosphate pathway (ko00030);; Glutathione metabolism (ko00480);; Carbon metabolism (ko01200)","[G]","Carbohydrate transport and metabolism","6-phosphogluconate dehydrogenase, C-terminal domain;; NAD binding domain of 6-phosphogluconate dehydrogenase","6-phosphogluconate dehydrogenase, decarboxylating 3 OS=Arabidopsis thaliana OX=3702 GN=At3g02360 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488)"]
["Bra039727","Bra039727",48.795879,2093,108.139664,4679,112.368843,4457,30.456699,924,16.747244,490,14.382546,423,{"v":1.17150224920706e-07,"d":"1.17E-07"},-2.59915255251577,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Cellular Component: plant-type vacuole (GO:0000325);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: manganese ion binding (GO:0030145);; Cellular Component: extracellular matrix (GO:0031012);; Biological Process: GDP-L-fucose biosynthetic process (GO:0042350);; Molecular Function: nutrient reservoir activity (GO:0045735);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Molecular Function: oxalate oxidase activity (GO:0050162);; ","--","--","--","--","Cupin;; Cupin domain","Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana OX=3702 GN=GLP9 PE=2 SV=2","S","Function unknown","PREDICTED: germin-like protein subfamily 1 member 8 [Brassica rapa] ","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: extracellular region (GO:0005576);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: extracellular matrix (GO:0031012);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: nutrient reservoir activity (GO:0045735);; molecular function: catalytic activity (GO:0003824)"]
["Bra027878","Bra027878",10.532084,594,12.224532,696,16.56252,864,1.215841,50,0,0,0.239896,11,{"v":9.19496390256244e-06,"d":"9.19E-06"},-4.23380594917009,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: heme oxygenase (decyclizing) activity (GO:0004392);; Biological Process: heme oxidation (GO:0006788);; Cellular Component: chloroplast (GO:0009507);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Biological Process: chloroplast-nucleus signaling pathway (GO:0010019);; Biological Process: phytochromobilin biosynthetic process (GO:0010024);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: inflorescence development (GO:0010229);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: heme binding (GO:0020037);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: cellular response to UV-C (GO:0071494);; ","K00510|0|brp:103838625|K00510 heme oxygenase (biliverdin-producing) [EC:1.14.14.18] | (RefSeq) heme oxygenase 4, chloroplastic","Porphyrin and chlorophyll metabolism (ko00860)","[P]","Inorganic ion transport and metabolism","Heme oxygenase","Heme oxygenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HO4 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: heme oxygenase 4, chloroplastic [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)"]
["Bra006470","Bra006470",8.05758,419,7.292482,383,7.094166,342,27.154205,999,26.414165,936,30.069389,1072,{"v":8.82142966230584e-18,"d":"8.82E-18"},1.34158748732252,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: transcription factor binding (GO:0008134);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: negative regulation of defense response to bacterium (GO:1900425);; Biological Process: positive regulation of transcription factor catabolic process (GO:1901485);; ","K10144|0|brp:103856325|K10144 RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase MIEL1","Ubiquitin mediated proteolysis (ko04120)","[R]","General function prediction only","Zinc-ribbon;; CHY zinc finger;; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1","S","Function unknown","PREDICTED: E3 ubiquitin-protein ligase MIEL1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra021428","Bra021428",3.593875,207,3.753548,215,3.941709,212,0,0,0.054641,3,0.002286,1,{"v":2.86975990216293e-23,"d":"2.87E-23"},-6.61960092050937,"down","[I]","Lipid transport and metabolism","Molecular Function: C-5 sterol desaturase activity (GO:0000248);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: pentacyclic triterpenoid biosynthetic process (GO:0019745);; Biological Process: single-organism process (GO:0044699);; Molecular Function: lathosterol oxidase activity (GO:0050046);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00227|0|brp:103843402|K00227 Delta7-sterol 5-desaturase [EC:1.14.19.20] | (RefSeq) putative Delta(7)-sterol-C5(6)-desaturase 2","Steroid biosynthesis (ko00100)","[I]","Lipid transport and metabolism","Fatty acid hydroxylase superfamily","Putative Delta(7)-sterol-C5(6)-desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=HDF7 PE=3 SV=1","I","Lipid transport and metabolism","PREDICTED: putative Delta(7)-sterol-C5(6)-desaturase 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra007114","Bra007114",1.133131,94,0.560979,46,0.661679,51,3.394982,196,4.459641,247,2.417058,142,0.000386948169785263,1.54507719105896,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","FBD;; Leucine Rich Repeat","FBD-associated F-box protein At4g10400 OS=Arabidopsis thaliana OX=3702 GN=At4g10400 PE=2 SV=2","S","Function unknown","PREDICTED: FBD-associated F-box protein At4g10400-like isoform X2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra014270","Bra014270",2.558977,53,0.527542,11,0.368949,7,6.721915,97,15.186295,211,19.137295,268,0.000475082796229285,2.73540405078501,"up","--","--","--","--","--","--","--","--","Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103832855 [Brassica rapa]","--"]
["Bra021209","Bra021209",4.191627,140,4.298762,145,5.685048,176,0.396801,10,0,0,0.54003,13,{"v":5.82943520132099e-06,"d":"5.83E-06"},-3.79313735232557,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: seed germination (GO:0009845);; ","--","--","[K]","Transcription","GATA zinc finger","GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1","K","Transcription","PREDICTED: GATA transcription factor 17-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: rhythmic process (GO:0048511);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501)"]
["Bra031742","Bra031742",6.160167,1004,11.294149,1892,11.474417,1760,5.701175,655,6.054177,683,5.362365,600,0.000562637015637926,-1.31976421003482,"down","[S]","Function unknown","Molecular Function: actin monomer binding (GO:0003785);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: organelle organization (GO:0006996);; Biological Process: establishment of tissue polarity (GO:0007164);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen germination (GO:0009846);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: stomatal movement (GO:0010118);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Molecular Function: 1-phosphatidylinositol-4-phosphate 5-kinase activity (GO:0016308);; Cellular Component: apical plasma membrane (GO:0016324);; Biological Process: phosphatidylinositol metabolic process (GO:0046488);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: root hair elongation (GO:0048767);; Molecular Function: actin filament binding (GO:0051015);; Biological Process: clathrin-dependent endocytosis (GO:0072583);; Cellular Component: pollen tube (GO:0090406);; ","K00889|0|brp:103843268|K00889 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] | (RefSeq) phosphatidylinositol 4-phosphate 5-kinase 7","Inositol phosphate metabolism (ko00562);; Phosphatidylinositol signaling system (ko04070);; Endocytosis (ko04144)","[T]","Signal transduction mechanisms","Phosphatidylinositol-4-phosphate 5-Kinase;; MORN repeat","Phosphatidylinositol 4-phosphate 5-kinase 7 OS=Arabidopsis thaliana OX=3702 GN=PIP5K7 PE=1 SV=1","T","Signal transduction mechanisms","phosphatidylinositol 4-phosphate 5-kinase 7-like isoform X2 [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: growth (GO:0040007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)"]
["Bra019940","Bra019940",39.977486,1769,59.948322,2676,57.249821,2343,27.730555,868,8.60596,263,7.864776,239,{"v":6.11787590999917e-05,"d":"6.12E-05"},-2.26285319897512,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: glutathione transferase activity (GO:0004364);; Cellular Component: cytosol (GO:0005829);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: glutathione metabolic process (GO:0006749);; Biological Process: aging (GO:0007568);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to salt stress (GO:0009651);; Biological Process: de-etiolation (GO:0009704);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: proline transport (GO:0015824);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Molecular Function: lyase activity (GO:0016829);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: lateral root development (GO:0048527);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: response to growth hormone (GO:0060416);; Biological Process: proteasome core complex assembly (GO:0080129);; Biological Process: negative regulation of response to water deprivation (GO:0080148);; Biological Process: response to karrikin (GO:0080167);; ","K00799|1.21275e-164|brp:103871807|K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) glutathione S-transferase U17","Glutathione metabolism (ko00480)","[O]","Posttranslational modification, protein turnover, chaperones","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, N-terminal domain","Glutathione S-transferase U17 OS=Arabidopsis thaliana OX=3702 GN=GSTU17 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: glutathione S-transferase U17 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra015917","Bra015917",3.671899,773,4.587162,975,5.674235,1105,2.909295,434,1.97251,283,3.312086,478,0.000337985760562076,-1.30522595272546,"down","[K]","Transcription","Biological Process: MAPK cascade (GO:0000165);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","--","--","Protein kinase domain;; Leucine rich repeat;; Protein tyrosine kinase;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine Rich repeat","Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana OX=3702 GN=At1g74360 PE=1 SV=1","S","Function unknown","PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704)"]
["Bra015998","Bra015998",19.296913,2367,35.74132,4945,26.735101,3389,12.274849,1002,3.954111,356,4.19493,308,{"v":2.02864006434955e-06,"d":"2.03E-06"},-2.62365047391224,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: electron carrier activity (GO:0009055);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[QI]","Secondary metabolites biosynthesis, transport and catabolism;; Lipid transport and metabolism","Cytochrome P450","Abietadienol/abietadienal oxidase OS=Pinus taeda OX=3352 GN=CYP720B1 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: abietadienol/abietadienal oxidase [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; molecular function: electron carrier activity (GO:0009055)"]
["Bra010636","Bra010636",12.80039,477,8.871046,334,7.77556,268,27.269464,719,33.925602,861,32.533806,831,{"v":3.04123903832006e-06,"d":"3.04E-06"},1.12397833619523,"up","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: plastoglobule (GO:0010287);; ","--","--","--","--","CAAD domains of cyanobacterial aminoacyl-tRNA synthetase","Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1","S","Function unknown","PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)"]
["Bra028910","Bra028910",401.991142,18896,540.141139,24382,475.937867,19879,180.961969,6028,115.65797,3628,100.944022,3187,{"v":8.85496751534495e-13,"d":"8.85E-13"},-2.32208200053666,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Cellular Component: chloroplast (GO:0009507);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","--","--","LURP-one-related","Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV=1","S","Function unknown","protein LURP-one-related 15 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: multi-organism process (GO:0051704)"]
["Bra025222","Bra025222",8.145275,627,5.720768,439,6.185412,422,3.231949,181,3.163345,151,1.215186,63,{"v":3.46049019855826e-05,"d":"3.46E-05"},-1.8826527938673,"down","[V]","Defense mechanisms","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to chitin (GO:0010200);; Molecular Function: bis(5'-adenosyl)-pentaphosphatase activity (GO:0034432);; ","K07766|1.24811e-124|brp:103875280|K07766 diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52] | (RefSeq) nudix hydrolase 13, mitochondrial","--","[T]","Signal transduction mechanisms","NUDIX domain","Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1","L","Replication, recombination and repair","PREDICTED: nudix hydrolase 13, mitochondrial isoform X2 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra028847","Bra028847",0.550332,62,0.417862,47,0.723831,44,2.766626,217,3.322371,252,4.565625,345,{"v":1.72416085725556e-11,"d":"1.72E-11"},2.32467105098091,"up","--","--","Biological Process: cellular process (GO:0009987);; Cellular Component: intracellular part (GO:0044424);; ","--","--","[A]","RNA processing and modification","RING-variant domain","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103850479 [Brassica rapa] ","biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra005004","Bra005004",1.741613,151,2.479646,218,2.843973,228,0.584905,40,0.49102,32,0.939468,60,{"v":3.48967986104861e-06,"d":"3.49E-06"},-2.17070407947834,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Molecular Function: L-proline transmembrane transporter activity (GO:0015193);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: proline transmembrane transport (GO:0035524);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; ","--","--","[E]","Amino acid transport and metabolism","Transmembrane amino acid transporter protein","Proline transporter 1 OS=Arabidopsis thaliana OX=3702 GN=PROT1 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: proline transporter 3-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra018138","Bra018138",30.945912,2740,24.054128,2110,26.766116,2215,12.769849,761,13.242657,889,17.691368,1121,{"v":1.76595029565983e-09,"d":"1.77E-09"},-1.38011511176635,"down","--","--","Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873234 [Brassica rapa]","cellular component: extracellular region (GO:0005576)"]
["Bra032437","Bra032437",3.070243,158,4.585373,262,5.348072,297,0,0,0,0,0,0,{"v":1.37203198550152e-18,"d":"1.37E-18"},-7.95814855692833,"down","[I]","Lipid transport and metabolism","Biological Process: long-chain fatty acid metabolic process (GO:0001676);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: transporter activity (GO:0005215);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (GO:0016717);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: very long-chain fatty acid biosynthetic process (GO:0042761);; Biological Process: response to arsenic-containing substance (GO:0046685);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[I]","Lipid transport and metabolism","Fatty acid desaturase","Delta-9 desaturase-like 1 protein OS=Arabidopsis thaliana OX=3702 GN=At1g06090 PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: delta-9 desaturase-like 1 protein [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra017498","Bra017498",8.116589,386,4.371216,251,5.954746,293,14.82519,542,20.764691,689,19.166417,745,{"v":9.80299316119058e-05,"d":"9.80E-05"},1.03784881657526,"up","[J]","Translation, ribosomal structure and biogenesis","--","K02884|4.79284e-110|brp:103839541|K02884 large subunit ribosomal protein L19 | (RefSeq) 50S ribosomal protein L19-2, chloroplastic-like","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein L19","50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like [Brassica rapa]","--"]
["Bra010553","Bra010553",1.27723,166,1.730597,224,2.284083,260,0.784145,74,0.216263,20,0.557048,51,0.000327572235872109,-2.11840329197071,"down","[C]","Energy production and conversion","Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity (GO:0004028);; Molecular Function: aldehyde dehydrogenase (NAD) activity (GO:0004029);; Molecular Function: aldehyde dehydrogenase [NAD(P)+] activity (GO:0004030);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: cellular aldehyde metabolic process (GO:0006081);; Biological Process: response to stress (GO:0006950);; Cellular Component: plastid (GO:0009536);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to abiotic stimulus (GO:0009628);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620);; Biological Process: calcium-mediated signaling (GO:0019722);; Biological Process: response to chemical (GO:0042221);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic substance metabolic process (GO:0071704);; ","K00128|0|brp:103834979|K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | (RefSeq) aldehyde dehydrogenase family 3 member F1-like","Glycolysis / Gluconeogenesis (ko00010);; Pentose and glucuronate interconversions (ko00040);; Ascorbate and aldarate metabolism (ko00053);; Fatty acid degradation (ko00071);; Valine, leucine and isoleucine degradation (ko00280);; Lysine degradation (ko00310);; Arginine and proline metabolism (ko00330);; Histidine metabolism (ko00340);; Tryptophan metabolism (ko00380);; beta-Alanine metabolism (ko00410);; Glycerolipid metabolism (ko00561);; Pyruvate metabolism (ko00620);; Limonene and pinene degradation (ko00903)","[C]","Energy production and conversion","Aldehyde dehydrogenase family","Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana OX=3702 GN=ALDH3F1 PE=2 SV=2","C","Energy production and conversion","PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra009710","Bra009710",23.591854,2060,15.555444,1371,14.468831,1169,6.592029,408,4.094309,244,3.902906,234,{"v":7.90041694579287e-14,"d":"7.90E-14"},-2.36281617482083,"down","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: protein binding (GO:0005515);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: microtubule (GO:0005874);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: microtubule-based movement (GO:0007018);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to salt stress (GO:0009651);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Cellular Component: membrane (GO:0016020);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Cellular Component: tubulin complex (GO:0045298);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root hair elongation (GO:0048767);; Biological Process: protein polymerization (GO:0051258);; Biological Process: cell wall organization (GO:0071555);; ","K07375|0|cic:CICLE_v10004755mg|K07375 tubulin beta | (RefSeq) hypothetical protein","Phagosome (ko04145)","[Z]","Cytoskeleton","Tubulin/FtsZ family, GTPase domain;; Tubulin C-terminal domain","Tubulin beta-8 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB8 PE=2 SV=2","Z","Cytoskeleton","hypothetical protein CICLE_v10004755mg [Citrus clementina]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra019962","Bra019962",11.763902,2090,11.559346,1677,12.30574,1948,10.333273,1052,6.874126,762,5.745815,637,{"v":2.48711933207857e-06,"d":"2.49E-06"},-1.26179997327539,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: seed dormancy process (GO:0010162);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: stamen development (GO:0048443);; Biological Process: petal morphogenesis (GO:0048446);; Biological Process: plant ovule development (GO:0048481);; Biological Process: root hair cell development (GO:0080147);; Biological Process: positive regulation of brassinosteroid biosynthetic process (GO:2000488);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1","K","Transcription","BnaA06g37950D [Brassica napus]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: reproduction (GO:0000003);; biological process: multicellular organismal process (GO:0032501)"]
["Bra024887","Bra024887",2.460307,466,2.328734,445,2.488467,436,6.407465,858,8.787853,1133,7.36884,956,{"v":9.67842454454641e-07,"d":"9.68E-07"},1.06876275961075,"up","[L]","Replication, recombination and repair","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: ATP-dependent DNA helicase activity (GO:0004003);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA repair (GO:0006281);; Biological Process: DNA recombination (GO:0006310);; ","K03655|0|brp:103827589|K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] | (RefSeq) ATP-dependent DNA helicase homolog RECG, chloroplastic","Homologous recombination (ko03440)","[A]","RNA processing and modification","Helicase conserved C-terminal domain;; DEAD/DEAH box helicase","ATP-dependent DNA helicase homolog RECG, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECG PE=3 SV=1","L","Replication, recombination and repair","PREDICTED: ATP-dependent DNA helicase homolog RECG, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)"]
["Bra019870","Bra019870",382.751934,39175,428.233515,44141,354.974352,33620,217.522839,15732,101.626462,7120,90.366166,6386,{"v":5.94261906433143e-07,"d":"5.94E-07"},-2.00269127645247,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: protein folding (GO:0006457);; Biological Process: purine nucleobase transport (GO:0006863);; Molecular Function: sucrose:proton symporter activity (GO:0008506);; Biological Process: response to heat (GO:0009408);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to nematode (GO:0009624);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: response to nitrate (GO:0010167);; Molecular Function: monosaccharide transmembrane transporter activity (GO:0015145);; Biological Process: nitrate transport (GO:0015706);; Biological Process: monosaccharide transport (GO:0015749);; Biological Process: sucrose transport (GO:0015770);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: regulation of defense response (GO:0031347);; Molecular Function: 2-alkenal reductase [NAD(P)] activity (GO:0032440);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","[R]","General function prediction only","Sugar (and other) transporter;; Major Facilitator Superfamily","Sugar transport protein 1 OS=Arabidopsis thaliana OX=3702 GN=STP1 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: sugar transport protein 1-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra014029","Bra014029",35.592872,2623,105.817164,7865,109.355321,7446,1.142159,61,0.652053,33,1.031973,54,{"v":1.75240959168877e-38,"d":"1.75E-38"},-6.67278050675264,"down","--","--","Biological Process: amino acid transmembrane transport (GO:0003333);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cell cortex (GO:0005938);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Cellular Component: chloroplast (GO:0009507);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: amino acid export (GO:0032973);; Molecular Function: L-amino acid efflux transmembrane transporter activity (GO:0034639);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: amino acid import (GO:0043090);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: animal organ development (GO:0048513);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: amino acid homeostasis (GO:0080144);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; ","--","--","--","--","EamA-like transporter family","WAT1-related protein At1g44800 OS=Arabidopsis thaliana OX=3702 GN=At1g44800 PE=1 SV=1","S","Function unknown","PREDICTED: WAT1-related protein At1g44800 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: transporter activity (GO:0005215)"]
["Bra029609","Bra029609",0.371913,26,0.588248,42,0.448935,29,1.881991,93,1.790918,85,1.440987,69,0.00980553696549484,1.23662273432819,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103870716 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra023149","Bra023149",2.554903,173,7.308432,498,6.791439,425,0.084878,5,0,0,0,0,{"v":4.06642192294616e-15,"d":"4.07E-15"},-6.59064147077348,"down","--","--","Biological Process: transition metal ion transport (GO:0000041);; Biological Process: defense response to nematode (GO:0002215);; Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: anion transport (GO:0006820);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: cell communication (GO:0007154);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: flower development (GO:0009908);; Biological Process: trichoblast differentiation (GO:0010054);; Cellular Component: membrane (GO:0016020);; Molecular Function: heme binding (GO:0020037);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: respiratory burst (GO:0045730);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: developmental growth (GO:0048589);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: nitrogen compound transport (GO:0071705);; Biological Process: response to nitrogen compound (GO:1901698);; ","K00430|0|brp:103840283|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 7-like","Phenylpropanoid biosynthesis (ko00940)","--","--","Peroxidase","Peroxidase 7 OS=Arabidopsis thaliana OX=3702 GN=PER7 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: peroxidase 7-like [Brassica rapa]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007)"]
["Bra021679","Bra021679",1.175938,147,1.46504,212,1.515823,205,4.168335,392,3.998424,364,3.754847,450,0.00356916023058878,1.00246248569042,"up","--","--","Molecular Function: (1->3)-beta-D-glucan binding (GO:0001872);; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: gene silencing (GO:0016458);; Biological Process: covalent chromatin modification (GO:0016569);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: cytoplasmic part (GO:0044444);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: seed development (GO:0048316);; Biological Process: shoot system development (GO:0048367);; Biological Process: callose deposition in cell wall (GO:0052543);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","X8 domain","Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=1 SV=3","S","Function unknown","PREDICTED: major pollen allergen Ole e 10 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; cellular component: membrane part (GO:0044425);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: localization (GO:0051179)"]
["Bra037404","Bra037404",15.721789,3233,22.312837,4620,23.16238,4403,8.759496,1274,3.907947,549,3.998007,571,{"v":4.42500765498236e-08,"d":"4.43E-08"},-2.36007679761764,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: vacuole (GO:0005773);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: anion transport (GO:0006820);; Biological Process: defense response (GO:0006952);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: integral component of endoplasmic reticulum membrane (GO:0030176);; Biological Process: single-organism cellular process (GO:0044763);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: organic substance transport (GO:0071702);; Biological Process: nitrogen compound transport (GO:0071705);; ","K01537|0|brp:103836850|K01537 Ca2+-transporting ATPase [EC:3.6.3.8] | (RefSeq) calcium-transporting ATPase 2, endoplasmic reticulum-type","--","[P]","Inorganic ion transport and metabolism","E1-E2 ATPase;; Cation transporting ATPase, C-terminus;; Cation transporter/ATPase, N-terminus;; haloacid dehalogenase-like hydrolase;; Cation transport ATPase (P-type);; haloacid dehalogenase-like hydrolase","Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana OX=3702 GN=ECA2 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: calcium-transporting ATPase 2, endoplasmic reticulum-type [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra018831","Bra018831",11.418963,1211,11.865145,1301,13.495451,1285,20.952781,1611,49.858168,3854,54.173859,4176,0.00408857609241228,1.24945052225501,"up","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Molecular Function: branched-chain-amino-acid transaminase activity (GO:0004084);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: branched-chain amino acid metabolic process (GO:0009081);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Molecular Function: methionine-oxo-acid transaminase activity (GO:0010326);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Molecular Function: L-leucine transaminase activity (GO:0052654);; Molecular Function: L-valine transaminase activity (GO:0052655);; Molecular Function: L-isoleucine transaminase activity (GO:0052656);; ","K00826|0|brp:103871365|K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] | (RefSeq) branched-chain-amino-acid aminotransferase 6","Cysteine and methionine metabolism (ko00270);; Valine, leucine and isoleucine degradation (ko00280);; Valine, leucine and isoleucine biosynthesis (ko00290);; Pantothenate and CoA biosynthesis (ko00770);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Amino-transferase class IV","Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana OX=3702 GN=BCAT6 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: branched-chain-amino-acid aminotransferase 6 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052)"]
["Bra017656","Bra017656",40.476059,2129,104.582069,5549,71.10746,3459,22.34837,832,4.695732,169,4.981925,180,{"v":7.66114596768904e-06,"d":"7.66E-06"},-3.05433651715126,"down","--","--","--","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 GN=ERF109 PE=1 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF109-like [Brassica rapa]","--"]
["Bra030652","Bra030652",6.906589,948,4.062227,566,3.607097,461,15.183102,1465,20.924558,1947,17.936925,1685,{"v":4.24244438017278e-06,"d":"4.24E-06"},1.33485591993148,"up","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: ATP-dependent peptidase activity (GO:0004176);; Molecular Function: metalloendopeptidase activity (GO:0004222);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein folding (GO:0006457);; Biological Process: proteolysis (GO:0006508);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: microtubule-severing ATPase activity (GO:0008568);; Biological Process: response to heat (GO:0009408);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: photosynthetic electron transport in photosystem I (GO:0009773);; Biological Process: chloroplast relocation (GO:0009902);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photoinhibition (GO:0010205);; Biological Process: photosystem II repair (GO:0010206);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Cellular Component: thylakoid lumen (GO:0031977);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: transcription from plastid promoter (GO:0042793);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cell division (GO:0051301);; ","K03798|0|brp:103836478|K03798 cell division protease FtsH [EC:3.4.24.-] | (RefSeq) ATP-dependent zinc metalloprotease FTSH 8, chloroplastic-like","--","[O]","Posttranslational modification, protein turnover, chaperones","Peptidase family M41;; ATPase family associated with various cellular activities (AAA);; FtsH Extracellular;; TIP49 C-terminus;; AAA domain (dynein-related subfamily);; Holliday junction DNA helicase ruvB N-terminus","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSH8 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, chloroplastic-like isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra019570","Bra019570",1.220969,126,2.200207,253,2.429963,234,3.560574,287,11.876922,915,10.419551,839,0.0085938461720713,1.55792984298248,"up","--","--","Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: cation transport (GO:0006812);; Biological Process: nucleotide transport (GO:0006862);; Molecular Function: cation transmembrane transporter activity (GO:0008324);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid envelope (GO:0009526);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Molecular Function: amino acid transmembrane transporter activity (GO:0015171);; Molecular Function: nucleotide transmembrane transporter activity (GO:0015215);; Biological Process: organic anion transport (GO:0015711);; Biological Process: intracellular transport (GO:0046907);; Biological Process: cofactor transport (GO:0051181);; Molecular Function: cofactor transporter activity (GO:0051184);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K15102|0|brp:103873512|K15102 solute carrier family 25 (mitochondrial phosphate transporter), member 3 | (RefSeq) mitochondrial phosphate carrier protein 2, mitochondrial","--","[C]","Energy production and conversion","Mitochondrial carrier protein","Mitochondrial phosphate carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MPT2 PE=2 SV=1","S","Function unknown","PREDICTED: mitochondrial phosphate carrier protein 2, mitochondrial [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: response to stimulus (GO:0050896)"]
["Bra025846","Bra025846",44.873169,1768,20.874546,830,20.675915,754,7.985339,223,4.93846,133,6.154328,167,{"v":5.63435569766452e-12,"d":"5.63E-12"},-2.61870001452897,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Biological Process: transport (GO:0006810);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: chloroplast (GO:0009507);; Biological Process: pollen development (GO:0009555);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to fructose (GO:0009750);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: anther dehiscence (GO:0009901);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: response to chitin (GO:0010200);; Cellular Component: membrane (GO:0016020);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: cellular component biogenesis (GO:0044085);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: xylan metabolic process (GO:0045491);; Biological Process: root development (GO:0048364);; Biological Process: regulation of jasmonic acid biosynthetic process (GO:0080141);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger;; RING-type zinc-finger","RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: RING-H2 finger protein ATL80 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle part (GO:0044422)"]
["Bra004397","Bra004397",30.298584,2186,39.51107,2856,40.593107,2672,17.996511,911,13.014886,612,10.594191,624,{"v":1.49061540837746e-10,"d":"1.49E-10"},-1.88958015465278,"down","--","--","Molecular Function: phosphorelay response regulator activity (GO:0000156);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: radial pattern formation (GO:0009956);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of root meristem growth (GO:0010082);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: leaf senescence (GO:0010150);; Biological Process: abaxial cell fate specification (GO:0010158);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Biological Process: regulation of anthocyanin metabolic process (GO:0031537);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: plant ovule development (GO:0048481);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: regulation of seed growth (GO:0080113);; ","--","--","--","--","MYB-CC type transfactor, LHEQLE motif;; Myb-like DNA-binding domain","Myb family transcription factor PHL8 OS=Arabidopsis thaliana OX=3702 GN=PHL8 PE=2 SV=1","K","Transcription","PREDICTED: myb family transcription factor PHL8-like isoform X2 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414)"]
["Bra025207","Bra025207",29.984259,3956,52.026088,6973,65.274439,8043,12.749183,1190,10.120242,913,9.133045,817,{"v":6.51636130216246e-12,"d":"6.52E-12"},-2.7196404603516,"down","[G]","Carbohydrate transport and metabolism","Cellular Component: nucleus (GO:0005634);; Cellular Component: Golgi apparatus (GO:0005794);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","--","--","--","--","Protein of unknown function (DUF707)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103875297 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra008665","Bra008665",0.605768,82,0.607621,42,0.662927,52,1.564992,125,2.150304,189,1.967463,183,0.000587414485397438,1.43024170760364,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: Golgi vesicle transport (GO:0048193);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103846374 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)"]
["Bra034836","Bra034836",8.046624,1415,15.925484,2927,18.211217,3078,8.932381,1209,5.303213,654,4.126613,537,0.00104365770647125,-1.65840993553973,"down","[I]","Lipid transport and metabolism","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: defense response (GO:0006952);; Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to fungus (GO:0009620);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: xylem development (GO:0010089);; Cellular Component: membrane (GO:0016020);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: methylation (GO:0032259);; Biological Process: cell wall macromolecule metabolic process (GO:0044036);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: single-organism process (GO:0044699);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: 2-phytyl-1,4-naphthoquinone methyltransferase activity (GO:0052624);; Molecular Function: S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity (GO:0080150);; ","--","--","--","--","SAM dependent carboxyl methyltransferase","Salicylate/benzoate carboxyl methyltransferase OS=Arabidopsis thaliana OX=3702 GN=BSMT1 PE=1 SV=1","S","Function unknown","PREDICTED: salicylate/benzoate carboxyl methyltransferase-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020)"]
["Bra030560","Bra030560",9.213182,412,23.65609,1066,16.287861,673,8.566012,271,11.21289,341,7.430612,228,0.00427493390676976,-1.38540510792687,"down","--","--","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: acid phosphatase activity (GO:0003993);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Biological Process: regulation of carbohydrate metabolic process (GO:0006109);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of translation (GO:0006417);; Biological Process: response to stress (GO:0006950);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: pattern specification process (GO:0007389);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to desiccation (GO:0009269);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: gravitropism (GO:0009630);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: flower development (GO:0009908);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cell tip growth (GO:0009932);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: lateral root formation (GO:0010311);; Biological Process: response to cyclopentenone (GO:0010583);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: single-multicellular organism process (GO:0044707);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cell wall organization (GO:0071555);; Biological Process: response to karrikin (GO:0080167);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K14484|3.59479e-167|brp:103836586|K14484 auxin-responsive protein IAA | (RefSeq) auxin-responsive protein IAA17","Plant hormone signal transduction (ko04075)","--","--","AUX/IAA family","Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2","K","Transcription","PREDICTED: auxin-responsive protein IAA17 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; biological process: growth (GO:0040007);; biological process: reproductive process (GO:0022414);; biological process: localization (GO:0051179);; biological process: reproduction (GO:0000003);; molecular function: binding (GO:0005488)"]
["Bra009032","Bra009032",1.969677,56,2.6222,74,2.700712,70,0.635879,13,0.023084,1,0.02753,1,0.000934866227162416,-3.13904410331349,"down","--","--","Cellular Component: cell wall (GO:0005618);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: tissue development (GO:0009888);; Biological Process: sterol biosynthetic process (GO:0016126);; Cellular Component: anchored component of membrane (GO:0031225);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: animal organ development (GO:0048513);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","--","--","--","--","--","--","--","--","--","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; cellular component: membrane part (GO:0044425);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987)"]
["Bra023471","Bra023471",2.672347,155,0.682312,47,0.581956,33,9.484929,400,12.754538,525,7.368972,293,0.000153393349529471,2.2584252897281,"up","--","--","--","--","--","--","--","Protein MS5","Uncharacterized protein At4g17700 OS=Arabidopsis thaliana OX=3702 GN=At4g17700 PE=2 SV=2","S","Function unknown","PREDICTED: uncharacterized protein At4g17700-like [Brassica rapa]","--"]
["Bra005518","Bra005518",0.060534,8,0,0,0,0,1.174382,96,0.896951,78,0.787176,69,0.000173542895727253,3.84517659407955,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; ","--","--","[R]","General function prediction only","--","--","S","Function unknown","BnaC04g11410D [Brassica napus]","molecular function: binding (GO:0005488)"]
["Brassica_rapa_newGene_12187","--",15.629768,1926,17.507814,2159,16.518911,1856,6.506808,570,5.884437,496,5.670444,481,{"v":2.81803146795044e-25,"d":"2.82E-25"},-1.98669727186056,"down","--","--","Molecular Function: CDP-diacylglycerol-serine O-phosphatidyltransferase activity (GO:0003882);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: phosphatidylethanolamine biosynthetic process (GO:0006646);; Biological Process: phosphatidylserine biosynthetic process (GO:0006659);; Biological Process: microsporogenesis (GO:0009556);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: nuclear membrane (GO:0031965);; ","K08730|0|brp:103872302|K08730 phosphatidylserine synthase 2 [EC:2.7.8.29] | (RefSeq) CDP-diacylglycerol--serine O-phosphatidyltransferase 1","Glycerophospholipid metabolism (ko00564)","[I]","Lipid transport and metabolism","Phosphatidyl serine synthase","CDP-diacylglycerol--serine O-phosphatidyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=PSS1 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502)"]
["Bra030178","Bra030178",2.965463,176,3.604281,224,3.791952,204,21.188393,851,8.929022,356,10.216654,408,0.0047326870050474,1.29883514662952,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to chitin (GO:0010200);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to hydrogen peroxide (GO:0070301);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1","K","Transcription","probable WRKY transcription factor 71 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra002629","Bra002629",297.58844,4273,256.624451,3718,242.198959,3217,162.996353,1656,71.385239,698,72.718864,716,{"v":2.76252261079325e-06,"d":"2.76E-06"},-1.86653443397751,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: regulation of cell proliferation (GO:0042127);; ","--","--","--","--","--","Protein PSY1 OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","protein PSY1-like [Brassica napus]","cellular component: extracellular region (GO:0005576);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007)"]
["Bra007282","Bra007282",6.467961,181,2.590564,74,3.945707,102,15.137339,300,16.591541,316,19.321255,370,0.000280468938776522,1.41232979376165,"up","--","--","Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: plastid translation (GO:0032544);; ","K19034|1.13076e-58|brp:103841589|K19034 50S ribosomal protein 5 | (RefSeq) 50S ribosomal protein 5, chloroplastic","--","--","--","--","50S ribosomal protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSRP5 PE=1 SV=1","S","Function unknown","PREDICTED: 50S ribosomal protein 5, chloroplastic [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra002382","Bra002382",201.887614,25156,118.210152,19173,138.183684,19652,108.031394,10017,51.95409,9597,97.345569,10029,{"v":2.76004004132472e-23,"d":"2.76E-23"},-1.14994531266409,"down","--","--","Biological Process: protein peptidyl-prolyl isomerization (GO:0000413);; Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; Molecular Function: protein binding (GO:0005515);; Molecular Function: FK506 binding (GO:0005528);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: autophagy (GO:0006914);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: megagametogenesis (GO:0009561);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Cellular Component: chloroplast outer membrane (GO:0009707);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: cytosol to ER transport (GO:0046967);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: microgametogenesis (GO:0055046);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","Ring finger domain;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; RING-H2 zinc finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger","Outer envelope protein 61 OS=Arabidopsis thaliana OX=3702 GN=OEP61 PE=1 SV=1","S","Function unknown","PREDICTED: outer envelope protein 61-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra015986","Bra015986",471.119202,24533,798.72406,42280,730.818329,34973,269.13089,9849,111.284992,3965,125.3051,4545,{"v":4.84783741900804e-08,"d":"4.85E-08"},-2.46585985979988,"down","[V]","Defense mechanisms","Cellular Component: cytosol (GO:0005829);; Molecular Function: diphosphoinositol-polyphosphate diphosphatase activity (GO:0008486);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to chitin (GO:0010200);; Molecular Function: inositol diphosphate tetrakisphosphate diphosphatase activity (GO:0052840);; Molecular Function: inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity (GO:0052843);; Molecular Function: inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity (GO:0052844);; Molecular Function: inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity (GO:0052845);; Molecular Function: inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity (GO:0052846);; Molecular Function: inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity (GO:0052847);; Molecular Function: inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity (GO:0052848);; ","K07766|1.66308e-116|brp:103831829|K07766 diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52] | (RefSeq) nudix hydrolase 21, chloroplastic-like","--","[T]","Signal transduction mechanisms","NUDIX domain","Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2 SV=1","S","Function unknown","PREDICTED: nudix hydrolase 21, chloroplastic-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896)"]
["Bra005387","Bra005387",125.209601,19960,31.111748,5016,35.374593,5204,30.730279,3468,9.431735,1031,10.040497,1084,0.000645118799179927,-2.23379224125993,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: galactose metabolic process (GO:0006012);; Biological Process: nucleotide-sugar metabolic process (GO:0009225);; Biological Process: pollen development (GO:0009555);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: xyloglucan biosynthetic process (GO:0009969);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: rhamnogalacturonan I biosynthetic process (GO:0010246);; Biological Process: rhamnogalacturonan II biosynthetic process (GO:0010306);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: arabinose biosynthetic process (GO:0019567);; Cellular Component: Golgi cisterna membrane (GO:0032580);; Biological Process: UDP-L-arabinose biosynthetic process (GO:0033358);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: capsule polysaccharide biosynthetic process (GO:0045227);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: pollen tube development (GO:0048868);; Molecular Function: UDP-arabinose 4-epimerase activity (GO:0050373);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: defense response by callose deposition (GO:0052542);; ","K12448|0|brp:103867413|K12448 UDP-arabinose 4-epimerase [EC:5.1.3.5] | (RefSeq) putative UDP-arabinose 4-epimerase 2","Amino sugar and nucleotide sugar metabolism (ko00520)","[M]","Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; Polysaccharide biosynthesis protein;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; RmlD substrate binding domain;; NAD(P)H-binding;; Male sterility protein","Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=At2g34850 PE=2 SV=3","M","Cell wall/membrane/envelope biogenesis","PREDICTED: putative UDP-arabinose 4-epimerase 2 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179)"]
["Bra010720","Bra010720",2.128136,121,1.174997,69,0.870525,46,5.24668,209,5.279517,203,5.389131,210,0.000735532885600965,1.35340210313832,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to ethylene (GO:0009723);; Biological Process: posttranscriptional gene silencing by RNA (GO:0035194);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; ","--","--","--","--","GAGA binding protein-like family","Protein BASIC PENTACYSTEINE5 OS=Arabidopsis thaliana OX=3702 GN=BPC5 PE=1 SV=1","K","Transcription","PREDICTED: protein BASIC PENTACYSTEINE5-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152)"]
["Bra014421","Bra014421",2.533199,208,2.054263,183,2.077939,158,7.304954,445,11.481732,605,7.555649,465,{"v":1.33962969020179e-08,"d":"1.34E-08"},1.40776547804677,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: multicellular organism development (GO:0007275);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: protein ubiquitination (GO:0016567);; ","K04506|0|brp:103862812|K04506 E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase SINAT3-like","Ubiquitin mediated proteolysis (ko04120)","[R]","General function prediction only","Seven in absentia protein family","E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: E3 ubiquitin-protein ligase SINAT3-like isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra036243","Bra036243",0.55844,17,0.736074,19,0.191962,8,3.242234,57,3.02084,53,2.210856,51,0.00183103075622931,1.74130249464017,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103836718 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)"]
["Bra019474","Bra019474",3.088642,681,0.340191,76,0.259979,54,6.711857,1047,9.356621,1405,11.93215,1803,0.00747010797714434,2.18868171881303,"up","[T]","Signal transduction mechanisms","--","K20715|0|brp:103873605|K20715 phototropin [EC:2.7.11.1] | (RefSeq) phototropin-1","--","--","--","PAS domain;; Protein kinase domain;; Protein tyrosine kinase;; PAS fold;; PAS fold;; PAS fold","Phototropin-1 OS=Arabidopsis thaliana OX=3702 GN=PHOT1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: phototropin-1 [Brassica rapa] ","--"]
["Bra026230","Bra026230",2.139654,232,0.530295,60,0.899118,90,8.565278,652,6.645325,489,8.73681,647,{"v":2.01134731641035e-05,"d":"2.01E-05"},2.1383626344833,"up","[G]","Carbohydrate transport and metabolism","Biological Process: maltose biosynthetic process (GO:0000024);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: cell tip growth (GO:0009932);; Biological Process: regulation of meristem structural organization (GO:0009934);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: microsporocyte differentiation (GO:0010480);; Biological Process: regulation of hormone levels (GO:0010817);; Molecular Function: beta-amylase activity (GO:0016161);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Molecular Function: cation binding (GO:0043169);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Molecular Function: protein self-association (GO:0043621);; Biological Process: gametophyte development (GO:0048229);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of shoot system development (GO:0048831);; Biological Process: cell wall organization (GO:0071555);; Biological Process: response to herbivore (GO:0080027);; ","K01177|0|brp:103868361|K01177 beta-amylase [EC:3.2.1.2] | (RefSeq) beta-amylase 3, chloroplastic-like","Starch and sucrose metabolism (ko00500)","--","--","Glycosyl hydrolase family 14","Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3","S","Function unknown","PREDICTED: beta-amylase 3, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; biological process: growth (GO:0040007);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704)"]
["Bra036061","Bra036061",42.122009,1333,99.629433,3180,68.601807,2007,52.968052,1185,41.086533,885,34.159683,741,0.00507619175644938,-1.25652899399491,"down","--","--","Biological Process: defense response to insect (GO:0002213);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to wounding (GO:0009611);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of cell death (GO:0010941);; Biological Process: cellular response to heat (GO:0034605);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cellular response to freezing (GO:0071497);; Biological Process: regulation of pectin biosynthetic process (GO:1900030);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF011 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra019114","Bra019114",10.868438,127,8.157508,96,8.939487,97,2.437673,21,2.466677,20,2.794526,23,{"v":1.34700800100903e-09,"d":"1.35E-09"},-2.30355289780408,"down","--","--","--","--","--","--","--","--","Arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=AGP13 PE=1 SV=1","S","Function unknown","PREDICTED: arabinogalactan peptide 13-like [Brassica rapa] ","--"]
["Bra010731","Bra010731",5.788606,359,5.314991,332,5.396767,309,2.147002,95,3.339001,141,3.371751,143,{"v":1.19443438606296e-06,"d":"1.19E-06"},-1.42551200601441,"down","--","--","Molecular Function: phospholipase C activity (GO:0004629);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: single-organism process (GO:0044699);; Biological Process: organic substance metabolic process (GO:0071704);; ","--","--","[T]","Signal transduction mechanisms","Phosphatidylinositol-specific phospholipase C, X domain","--","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra016571","Bra016571",0.075712,5,0.042456,6,0.026956,3,1.062998,80,2.282518,145,1.683099,106,{"v":2.6059920145369e-12,"d":"2.61E-12"},4.2100969601611,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Cellular Component: plasmodesma (GO:0009506);; ","K03267|0|brp:103835924|K03267 peptide chain release factor subunit 3 | (RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like","mRNA surveillance pathway (ko03015)","[J]","Translation, ribosomal structure and biogenesis","Elongation factor Tu GTP binding domain;; Elongation factor Tu C-terminal domain;; Elongation factor Tu domain 2","Elongation factor 1-alpha C OS=Porphyra purpurea OX=2787 GN=TEF-C PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell junction (GO:0030054)"]
["Brassica_rapa_newGene_24189","--",3.252249,325,2.05127,201,2.281291,212,6.017868,418,9.2664,607,10.396444,677,0.000362490939047188,1.15748320128494,"up","--","--","Molecular Function: acyl-[acyl-carrier-protein] hydrolase activity (GO:0016297);; ","K10782|4.0791e-66|gmx:100795986|K10782 fatty acyl-ACP thioesterase A [EC:3.1.2.14] | (RefSeq) oleoyl-acyl carrier protein thioesterase 1, chloroplastic-like","Fatty acid biosynthesis (ko00061)","--","--","Acyl-ACP thioesterase","Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum OX=4047 GN=FATA PE=2 SV=1","I","Lipid transport and metabolism","PREDICTED: oleoyl-acyl carrier protein thioesterase 1, chloroplastic-like [Glycine max] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra032591","Bra032591",52.568771,6488,47.592817,5887,40.969161,4655,23.25628,2044,16.849568,1399,12.598176,1057,{"v":3.60519349311231e-11,"d":"3.61E-11"},-1.93597787867877,"down","--","--","Molecular Function: triglyceride lipase activity (GO:0004806);; Cellular Component: extracellular region (GO:0005576);; Biological Process: lipid metabolic process (GO:0006629);; ","--","--","--","--","Lipase (class 3)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103843744 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699)"]
["Bra019730","Bra019730",4.321975,351,9.064047,707,9.328345,668,1.128462,67,0.303694,19,0.616331,43,{"v":1.46579746412983e-10,"d":"1.47E-10"},-3.61636816797742,"down","[G]","Carbohydrate transport and metabolism","--","K01728|0|brp:103872042|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) putative pectate lyase 2","Pentose and glucuronate interconversions (ko00040)","--","--","Pectate lyase;; Right handed beta helix region","Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: putative pectate lyase 2 [Brassica rapa]","--"]
["Bra031582","Bra031582",6.161348,460,3.58994,271,4.148518,287,25.229576,1332,25.144604,1188,22.691825,1160,{"v":9.92067126977837e-16,"d":"9.92E-16"},1.80822295520586,"up","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: response to hormone (GO:0009725);; Biological Process: single-organism process (GO:0044699);; Biological Process: negative regulation of biological process (GO:0048519);; ","--","--","[R]","General function prediction only","Leucine Rich repeats (2 copies);; F-box-like;; F-box domain","F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1","S","Function unknown","F-box protein SKIP19-like isoform X1 [Brassica napus] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra000863","Bra000863",2.99449,285,2.303461,221,2.147996,190,7.530889,500,9.127034,589,8.739617,558,{"v":8.10065037891914e-09,"d":"8.10E-09"},1.19859804184899,"up","[J]","Translation, ribosomal structure and biogenesis","Biological Process: maltose metabolic process (GO:0000023);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: phosphatidylglycerol biosynthetic process (GO:0006655);; Cellular Component: plastid (GO:0009536);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: ribosome biogenesis (GO:0042254);; ","K19828|0|brp:103858739|K19828 mitochondrial GTPase 1 | (RefSeq) DAR GTPase 3, chloroplastic","--","[R]","General function prediction only","50S ribosome-binding GTPase;; Ferrous iron transport protein B","DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DGP3 PE=2 SV=1","S","Function unknown","BnaC03g30610D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra032435","Bra032435",8.83485,122,24.861345,346,23.999193,306,3.265777,32,2.192559,21,1.507569,15,{"v":2.4508991724864e-08,"d":"2.45E-08"},-3.37248057042187,"down","--","--","Molecular Function: hydroxyacylglutathione hydrolase activity (GO:0004416);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: glutathione biosynthetic process (GO:0006750);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: chloroplast (GO:0009507);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; Biological Process: cysteine biosynthetic process (GO:0019344);; ","--","--","--","--","--","--","--","--","PREDICTED: uncharacterized protein LOC108869798 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)"]
["Bra033226","Bra033226",9.762532,1436,7.947161,1180,6.314213,859,2.866083,299,1.51411,152,1.635652,165,{"v":7.71965437479237e-13,"d":"7.72E-13"},-2.47882947755876,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: serine-type endopeptidase activity (GO:0004252);; Cellular Component: cell wall (GO:0005618);; Biological Process: proteolysis (GO:0006508);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: external side of plasma membrane (GO:0009897);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Cellular Component: extracellular matrix (GO:0031012);; Biological Process: regulation of cell proliferation (GO:0042127);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Cellular Component: apoplast (GO:0048046);; Biological Process: mucilage metabolic process involved in seed coat development (GO:0048359);; Biological Process: mucilage extrusion from seed coat (GO:0080001);; ","--","--","--","--","Subtilase family;; PA domain;; Peptidase inhibitor I9","Subtilisin-like protease SBT1.1 OS=Arabidopsis thaliana OX=3702 GN=SBTI1.1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: subtilisin-like protease SBT1.1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: extracellular matrix (GO:0031012);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: cellular process (GO:0009987);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414)"]
["Bra017738","Bra017738",2.95337,309,2.487861,263,1.496728,148,7.711599,552,8.623002,627,7.683196,542,{"v":7.03177854083665e-05,"d":"7.03E-05"},1.21497187171244,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1","S","Function unknown","PREDICTED: F-box protein At4g35930 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra018030","Bra018030",82.017062,14498,83.284747,14891,70.407152,11505,59.610563,7447,46.15261,5661,43.750981,5311,{"v":9.46482816808414e-09,"d":"9.46E-09"},-1.19186452821659,"down","[O]","Posttranslational modification, protein turnover, chaperones","Molecular Function: DNA binding (GO:0003677);; Molecular Function: ATP-dependent peptidase activity (GO:0004176);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: nucleotide-excision repair (GO:0006289);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: chloroplast relocation (GO:0009902);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: PSII associated light-harvesting complex II catabolic process (GO:0010304);; Biological Process: regulation of chlorophyll biosynthetic process (GO:0010380);; Cellular Component: Tic complex (GO:0031897);; Biological Process: protein hexamerization (GO:0034214);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: transcription from plastid promoter (GO:0042793);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: protein import into chloroplast stroma (GO:0045037);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; ","K03696|0|brp:103873112|K03696 ATP-dependent Clp protease ATP-binding subunit ClpC | (RefSeq) chaperone protein ClpC2, chloroplastic","--","[O]","Posttranslational modification, protein turnover, chaperones","AAA domain (Cdc48 subfamily);; Clp amino terminal domain, pathogenicity island component;; ATPase family associated with various cellular activities (AAA);; C-terminal, D2-small domain, of ClpB protein;; AAA domain (dynein-related subfamily);; AAA ATPase domain;; Sigma-54 interaction domain;; Bacterial TniB protein;; UvrB/uvrC motif;; AAA domain;; IstB-like ATP binding protein;; Magnesium chelatase, subunit ChlI;; RNA helicase","Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC2 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: chaperone protein ClpC2, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425)"]
["Bra034399","Bra034399",11.122682,1316,33.831048,4124,40.776671,6896,5.898733,555,1.493361,84,1.161339,111,{"v":3.35235296648894e-06,"d":"3.35E-06"},-3.68556923013188,"down","[R]","General function prediction only","Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plastid (GO:0009536);; Biological Process: cytokinin biosynthetic process (GO:0009691);; Biological Process: maintenance of floral meristem identity (GO:0010076);; Biological Process: maintenance of inflorescence meristem identity (GO:0010077);; Biological Process: regulation of vegetative meristem growth (GO:0010083);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799);; Molecular Function: lyase activity (GO:0016829);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: specification of plant organ number (GO:0048832);; ","K06966|1.01663e-143|brp:103864833|K06966 uncharacterized protein | (RefSeq) cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1","--","--","--","Possible lysine decarboxylase","Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1","S","Function unknown","PREDICTED: cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)"]
["Bra011739","Bra011739",12.083894,833,27.439545,1908,19.721334,1257,2.663238,130,0.864635,41,0.443251,21,{"v":5.69286929099724e-10,"d":"5.69E-10"},-4.10574716299429,"down","[T]","Signal transduction mechanisms","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Molecular Function: phospholipase C activity (GO:0004629);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA replication (GO:0006260);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: signal transduction (GO:0007165);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: stomatal complex development (GO:0010374);; Biological Process: membrane organization (GO:0016044);; Biological Process: histone modification (GO:0016570);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: innate immune response (GO:0045087);; Biological Process: gametophyte development (GO:0048229);; Biological Process: pollen sperm cell differentiation (GO:0048235);; Biological Process: shoot system development (GO:0048367);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cell wall organization (GO:0071555);; Biological Process: protein complex subunit organization (GO:0071822);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","--","--","[T]","Signal transduction mechanisms","Protein kinase domain;; Protein tyrosine kinase","Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: mitogen-activated protein kinase kinase kinase NPK1 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502);; biological process: signaling (GO:0023052);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: immune system process (GO:0002376);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: localization (GO:0051179)"]
["Bra039471","Bra039471",124.366598,3359,99.995962,2679,92.570476,2277,396.076036,7423,359.273071,6914,362.316703,6588,{"v":7.91671224243542e-22,"d":"7.92E-22"},1.29021915203065,"up","[IQ]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","Molecular Function: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process (GO:0000036);; Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Cellular Component: cytosol (GO:0005829);; Biological Process: rRNA processing (GO:0006364);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: response to cold (GO:0009409);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: plastid organization (GO:0009657);; Biological Process: response to sucrose (GO:0009744);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of proton transport (GO:0010155);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: response to far red light (GO:0010218);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0019288);; Molecular Function: phosphopantetheine binding (GO:0031177);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: cuticle development (GO:0042335);; Biological Process: defense response to virus (GO:0051607);; ","--","--","[CIQ]","Energy production and conversion;; Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism","Phosphopantetheine attachment site","Acyl carrier protein SF2, chloroplastic OS=Brassica campestris OX=3711 GN=Acl1.1 PE=2 SV=1","I","Lipid transport and metabolism","acyl carrier protein SF2, chloroplastic [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: developmental process (GO:0032502)"]
["Bra040479","Bra040479",1.299001,85,3.01443,204,2.965549,189,1.405887,64,0.104701,7,0.376402,15,0.00865077832529617,-2.24841584216651,"down","[CP]","Energy production and conversion;; Inorganic ion transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Molecular Function: inorganic diphosphatase activity (GO:0004427);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: defense response (GO:0006952);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: membrane (GO:0016020);; Biological Process: lipid storage (GO:0019915);; Biological Process: response to chemical (GO:0042221);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism biosynthetic process (GO:0044711);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K01507|5.13845e-149|brp:103866313|K01507 inorganic pyrophosphatase [EC:3.6.1.1] | (RefSeq) soluble inorganic pyrophosphatase 3","Oxidative phosphorylation (ko00190)","[C]","Energy production and conversion","Inorganic pyrophosphatase","Soluble inorganic pyrophosphatase 3 OS=Arabidopsis thaliana OX=3702 GN=PPA3 PE=2 SV=1","C","Energy production and conversion","PREDICTED: soluble inorganic pyrophosphatase 3 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704)"]
["Bra009593","Bra009593",7.097136,1109,5.133585,724,18.421456,2376,2.135693,242,0.978373,108,1.19993,114,{"v":1.06208644213759e-07,"d":"1.06E-07"},-3.08919306092019,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: N-terminal protein myristoylation (GO:0006499);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to cold (GO:0009409);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: Golgi vesicle transport (GO:0048193);; Biological Process: leaf development (GO:0048366);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Stage II sporulation protein E (SpoIIE)","Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana OX=3702 GN=PLL2 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 66 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra004033","Bra004033",8.143229,503,4.956607,309,4.611291,264,18.969868,828,21.640261,910,25.595997,1083,{"v":1.12087312909451e-06,"d":"1.12E-06"},1.35357364311403,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: defense response (GO:0006952);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: cutin biosynthetic process (GO:0010143);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: wax metabolic process (GO:0010166);; Biological Process: transcription factor import into nucleus (GO:0042991);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: animal organ development (GO:0048513);; Biological Process: cotyledon development (GO:0048825);; ","--","--","--","--","AP2 domain","Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 GN=ERF118 PE=2 SV=1","K","Transcription","PREDICTED: ethylene-responsive transcription factor ERF118-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179)"]
["Bra040640","Bra040640",1.335783,98,1.963081,146,3.644971,248,0.195354,11,0.154667,8,0.048629,3,{"v":9.07976220079371e-10,"d":"9.08E-10"},-4.18154807849357,"down","--","--","Molecular Function: carboxylic ester hydrolase activity (GO:0004091);; Molecular Function: cholinesterase activity (GO:0004104);; Molecular Function: alpha-L-fucosidase activity (GO:0004560);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Molecular Function: lipase activity (GO:0016298);; Molecular Function: IgE binding (GO:0019863);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: xylan biosynthetic process (GO:0045492);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana OX=3702 GN=At3g05180 PE=2 SV=1","--","--","PREDICTED: GDSL esterase/lipase At3g05180-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra023497","Bra023497",1.947837,163,2.020919,172,2.196501,155,8.93549,401,8.557508,503,7.166376,397,{"v":9.99893558917191e-08,"d":"1.00E-07"},1.34045257282364,"up","--","--","Biological Process: cell morphogenesis (GO:0000902);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: positive regulation of cell proliferation (GO:0008284);; Biological Process: response to xenobiotic stimulus (GO:0009410);; Biological Process: response to auxin (GO:0009733);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: negative regulation of DNA endoreduplication (GO:0032876);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","--","--","[K]","Transcription","E2F/DP family winged-helix DNA-binding domain","E2F transcription factor-like E2FD OS=Arabidopsis thaliana OX=3702 GN=E2FD PE=1 SV=1","K","Transcription","PREDICTED: E2F transcription factor-like E2FD [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896)"]
["Brassica_rapa_newGene_14070","--",0,0,0,0,0.061568,7,0.994201,74,2.671186,188,2.981178,199,{"v":1.19243751459953e-05,"d":"1.19E-05"},4.46035087075794,"up","--","--","--","--","--","--","--","--","--","--","--","BnaA01g19630D [Brassica napus]","--"]
["Bra029721","Bra029721",4.005672,717,2.597725,469,2.73717,449,9.694118,1213,13.465049,1632,12.162595,1496,{"v":1.40915049318025e-08,"d":"1.41E-08"},1.36750299487124,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Biological Process: intercellular transport (GO:0010496);; Biological Process: root radial pattern formation (GO:0090057);; ","K13141|0|brp:103870585|K13141 integrator complex subunit 4 | (RefSeq) protein SIEL","--","[S]","Function unknown","HEAT repeat","Protein SIEL OS=Arabidopsis thaliana OX=3702 GN=SIEL PE=1 SV=1","S","Function unknown","PREDICTED: protein SIEL isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)"]
["Bra014020","Bra014020",32.311699,3041,55.088298,5232,58.233642,5070,34.800658,2315,27.666492,1779,29.274442,1887,0.000697711132375395,-1.21901109463652,"down","--","--","Biological Process: amino acid transmembrane transport (GO:0003333);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: water transport (GO:0006833);; Biological Process: nucleotide transport (GO:0006862);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: acidic amino acid transmembrane transporter activity (GO:0015172);; Molecular Function: basic amino acid transmembrane transporter activity (GO:0015174);; Molecular Function: neutral amino acid transmembrane transporter activity (GO:0015175);; Molecular Function: primary active transmembrane transporter activity (GO:0015399);; Biological Process: ammonium transport (GO:0015696);; Biological Process: neutral amino acid transport (GO:0015804);; Biological Process: arginine transport (GO:0015809);; Biological Process: aspartate transport (GO:0015810);; Biological Process: tryptophan transport (GO:0015827);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: amino acid import (GO:0043090);; Biological Process: regulation of ion transport (GO:0043269);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","[E]","Amino acid transport and metabolism","Transmembrane amino acid transporter protein","Amino acid permease 5 OS=Arabidopsis thaliana OX=3702 GN=AAP5 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: amino acid permease 5-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215)"]
["Bra036997","Bra036997",6.022438,715,10.707463,1294,13.416704,1423,0.513333,43,0.020084,2,0.08647,9,{"v":2.41058860090469e-11,"d":"2.41E-11"},-5.31744526011631,"down","[R]","General function prediction only","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: membrane fusion (GO:0006944);; Biological Process: response to cold (GO:0009409);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: regulation of systemic acquired resistance (GO:0010112);; Biological Process: response to chitin (GO:0010200);; Biological Process: auxin homeostasis (GO:0010252);; Molecular Function: indole-3-acetic acid amido synthetase activity (GO:0010279);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: response to cyclopentenone (GO:0010583);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: detection of fungus (GO:0016046);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: benzoate metabolic process (GO:0018874);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: positive regulation of plant-type hypersensitive response (GO:0034052);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: interspecies interaction between organisms (GO:0044419);; Biological Process: defense response to fungus (GO:0050832);; Molecular Function: 4-aminobenzoate amino acid synthetase activity (GO:0052625);; Molecular Function: benzoate amino acid synthetase activity (GO:0052626);; Molecular Function: vanillate amino acid synthetase activity (GO:0052627);; Molecular Function: 4-hydroxybenzoate amino acid synthetase activity (GO:0052628);; Biological Process: cellular response to hypoxia (GO:0071456);; Biological Process: positive regulation of camalexin biosynthetic process (GO:1901183);; ","K14487|0|bna:106423295|K14487 auxin responsive GH3 gene family | (RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like","Plant hormone signal transduction (ko04075)","--","--","GH3 auxin-responsive promoter","4-substituted benzoates-glutamate ligase GH3.12 OS=Arabidopsis thaliana OX=3702 GN=GH3.12 PE=1 SV=1","S","Function unknown","PREDICTED: 4-substituted benzoates-glutamate ligase GH3.12-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra008131","Bra008131",18.398955,1494,37.524576,2988,61.973126,4848,5.183046,374,10.398393,594,8.694189,486,{"v":3.62168872005126e-07,"d":"3.62E-07"},-2.65999123257129,"down","--","--","Biological Process: tryptophan biosynthetic process (GO:0000162);; Biological Process: MAPK cascade (GO:0000165);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to insect (GO:0009625);; Biological Process: response to salt stress (GO:0009651);; Biological Process: induced systemic resistance (GO:0009682);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: indole glucosinolate biosynthetic process (GO:0009759);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to UV-B (GO:0010224);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: detection of bacterium (GO:0016045);; Molecular Function: kinase activity (GO:0016301);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: mucilage biosynthetic process involved in seed coat development (GO:0048354);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: regulation of phenylpropanoid metabolic process (GO:2000762);; ","K09422|0|bna:106381366|K09422 myb proto-oncogene protein, plant | (RefSeq) transcription factor MYB122-like","--","[K]","Transcription","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB122 OS=Arabidopsis thaliana OX=3702 GN=MYB122 PE=1 SV=1","K","Transcription","transcription factor MYB122-like [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501)"]
["Bra008097","Bra008097",1.519484,151,1.810302,167,0.716083,65,6.170173,380,5.015956,368,4.073808,340,0.000416368504415502,1.43861296776637,"up","[S]","Function unknown","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103852847 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra026749","Bra026749",30.598988,7714,44.016892,11567,60.230594,14433,21.27634,3926,10.279916,1791,11.640786,2042,{"v":1.91500999889491e-06,"d":"1.92E-06"},-2.14012314489723,"down","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: long-chain fatty acid metabolic process (GO:0001676);; Biological Process: defense response to insect (GO:0002213);; Molecular Function: transcription cofactor activity (GO:0003712);; Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: cell cycle (GO:0007049);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: shoot system development (GO:0048367);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: cellular response to stimulus (GO:0051716);; ","K14972|0|brp:103842885|K14972 PAX-interacting protein 1 | (RefSeq) mediator of RNA polymerase II transcription subunit 15a-like","--","--","--","KIX domain","Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1","S","Function unknown","PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Brassica rapa] ","biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; molecular function: protein binding transcription factor activity (GO:0000988);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra011764","Bra011764",2.169345,178,1.347597,104,1.54589,109,6.77355,370,5.962914,322,6.654998,343,{"v":5.88948680839365e-07,"d":"5.89E-07"},1.35759946134716,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103859947 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra011469","Bra011469",9.453379,569,8.241017,485,8.182875,477,28.910023,1200,45.780126,1826,48.594055,1955,{"v":2.15895725494209e-09,"d":"2.16E-09"},1.63652152265939,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","Protein SHORT HYPOCOTYL IN WHITE LIGHT 1 OS=Arabidopsis thaliana OX=3702 GN=SHW1 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103844261 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000052","Bra000052",67.165108,2711,44.796532,1825,35.681129,1332,35.904049,1025,31.004669,853,30.738604,850,{"v":2.07369422850032e-05,"d":"2.07E-05"},-1.11192141839335,"down","--","--","Molecular Function: protein phosphatase inhibitor activity (GO:0004864);; Molecular Function: receptor activity (GO:0004872);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: fatty acid catabolic process (GO:0009062);; Cellular Component: chloroplast (GO:0009507);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: regulation of seed germination (GO:0010029);; Molecular Function: abscisic acid binding (GO:0010427);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: protein homodimerization activity (GO:0042803);; Biological Process: regulation of protein serine/threonine phosphatase activity (GO:0080163);; ","K14496|1.07906e-141|brp:103857772|K14496 abscisic acid receptor PYR/PYL family | (RefSeq) abscisic acid receptor PYL4","Plant hormone signal transduction (ko04075)","--","--","Polyketide cyclase / dehydrase and lipid transport;; Pathogenesis-related protein Bet v I family","Abscisic acid receptor PYL4 OS=Arabidopsis thaliana OX=3702 GN=PYL4 PE=1 SV=1","S","Function unknown","PREDICTED: abscisic acid receptor PYL4 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; molecular function: receptor activity (GO:0004872);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896)"]
["Bra020271","Bra020271",1.776032,90,1.576674,85,2.152421,102,12.232268,379,21.376648,698,23.033942,730,{"v":2.59226878420269e-11,"d":"2.59E-11"},2.57780736308459,"up","--","--","Molecular Function: phosphorelay response regulator activity (GO:0000156);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Biological Process: DNA repair (GO:0006281);; Biological Process: shade avoidance (GO:0009641);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: far-red light signaling pathway (GO:0010018);; Biological Process: circumnutation (GO:0010031);; Biological Process: negative regulation of photomorphogenesis (GO:0010100);; Biological Process: red light signaling pathway (GO:0010161);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of circadian rhythm (GO:0042752);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: positive regulation of short-day photoperiodism, flowering (GO:0048576);; Biological Process: negative regulation of long-day photoperiodism, flowering (GO:0048579);; ","--","--","--","--","CCT motif","Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1","S","Function unknown","zinc finger protein CONSTANS-LIKE 5-like [Brassica napus] ","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular transducer activity (GO:0060089);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; molecular function: binding (GO:0005488)"]
["Bra028884","Bra028884",3.758718,231,4.349057,178,3.49576,187,0.259697,11,0,0,0,0,{"v":7.73485616853591e-06,"d":"7.73E-06"},-4.49263961355531,"down","--","--","Cellular Component: vacuole (GO:0005773);; ","--","--","--","--","ML domain","MD-2-related lipid-recognition protein 3 OS=Arabidopsis thaliana OX=3702 GN=ML3 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103850436 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra007516","Bra007516",1.003684,30,1.02889,31,0.487906,14,4.20658,88,5.061769,102,3.900328,79,0.000310948226422858,1.7413227081479,"up","--","--","--","--","--","--","--","GCK domain","--","--","--","PREDICTED: uncharacterized protein LOC103841873 [Brassica rapa]","--"]
["Brassica_rapa_newGene_29494","--",0.077203,8,0.195852,19,0.209858,18,0.757913,50,1.041776,66,1.5166,72,0.00362247831505892,1.84357101274158,"up","--","--","--","--","--","[R]","General function prediction only","--","--","S","Function unknown","uncharacterized protein LOC111206195 [Brassica napus]","--"]
["Bra035331","Bra035331",0.045113,3,0.060548,5,0.068361,5,1.122055,53,1.120904,51,1.864028,85,{"v":1.76358967551804e-07,"d":"1.76E-07"},3.47784138636794,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: negative regulation of brassinosteroid biosynthetic process (GO:0010423);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K14499|1.8439e-139|brp:103848567|K14499 BRI1 kinase inhibitor 1 | (RefSeq) BRI1 kinase inhibitor 1","Plant hormone signal transduction (ko04075)","--","--","--","BRI1 kinase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=BKI1 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: BRI1 kinase inhibitor 1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)"]
["Bra018141","Bra018141",4.03374,342,2.584119,223,2.256255,179,8.686329,593,16.950906,1167,16.097869,939,{"v":1.37003371310101e-06,"d":"1.37E-06"},1.79876165279314,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: phospholipid transfer to membrane (GO:0006649);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: programmed cell death (GO:0012501);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; ","--","--","--","--","Dof domain, zinc finger","Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2","S","Function unknown","PREDICTED: cyclic dof factor 3 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987)"]
["Brassica_rapa_newGene_9565","--",0.178048,26,0.466781,65,0.394823,39,0.951643,106,2.419971,185,1.191798,131,0.00739420574199225,1.53628847835103,"up","--","--","Molecular Function: RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: plant-type primary cell wall biogenesis (GO:0009833);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);; Biological Process: cellulose biosynthetic process (GO:0030244);; Cellular Component: intracellular organelle part (GO:0044446);; Biological Process: cell wall organization (GO:0071555);; ","--","--","--","--","Cellulose synthase;; Cellulose synthase;; Cellulose synthase","Cellulose synthase-like protein E1 OS=Arabidopsis thaliana OX=3702 GN=CSLE1 PE=2 SV=1","S","Function unknown","PREDICTED: cellulose synthase-like protein E1 isoform X1 [Camelina sativa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422)"]
["Bra026090","Bra026090",51.247208,3791,63.835985,4823,61.448171,4244,41.144123,2099,36.856623,1862,38.368892,1939,{"v":1.6317472024569e-07,"d":"1.63E-07"},-1.1801896210517,"down","[M]","Cell wall/membrane/envelope biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: alternative mRNA splicing, via spliceosome (GO:0000380);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: tRNA modification (GO:0006400);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: embryo sac development (GO:0009553);; Biological Process: pollen development (GO:0009555);; Biological Process: response to salt stress (GO:0009651);; Biological Process: etioplast organization (GO:0009662);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: negative regulation of flower development (GO:0009910);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: histone H3-K36 methylation (GO:0010452);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Biological Process: positive regulation of histone methylation (GO:0031062);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Molecular Function: histone methyltransferase activity (H3-K4 specific) (GO:0042800);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: carotenoid isomerase activity (GO:0046608);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: histone methyltransferase activity (H3-K36 specific) (GO:0046975);; Cellular Component: apoplast (GO:0048046);; Biological Process: seed development (GO:0048316);; Biological Process: leaf development (GO:0048366);; Biological Process: plant ovule development (GO:0048481);; Biological Process: anther development (GO:0048653);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: sporopollenin biosynthetic process (GO:0080110);; Biological Process: 5-carbamoylmethyl uridine residue modification (GO:0080178);; ","K09753|0|brp:103872395|K09753 cinnamoyl-CoA reductase [EC:1.2.1.44] | (RefSeq) cinnamoyl-CoA reductase 1","Phenylpropanoid biosynthesis (ko00940)","[V]","Defense mechanisms","NAD dependent epimerase/dehydratase family;; NAD(P)H-binding;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; NmrA-like family;; GDP-mannose 4,6 dehydratase;; Male sterility protein;; Polysaccharide biosynthesis protein;; KR domain","Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=CCR1 PE=1 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: cinnamoyl-CoA reductase 1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; cellular component: extracellular region (GO:0005576);; biological process: multi-organism process (GO:0051704)"]
["Bra035977","Bra035977",2.527617,258,13.506486,1384,13.642748,1282,0.072559,6,0,0,0,0,{"v":2.54238302450261e-05,"d":"2.54E-05"},-4.92266208008921,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);; Molecular Function: sugar:proton symporter activity (GO:0005351);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphate ion transport (GO:0006817);; Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abscisic acid (GO:0009737);; Molecular Function: phosphate ion transmembrane transporter activity (GO:0015114);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: transmembrane transport (GO:0055085);; Molecular Function: arsenate ion transmembrane transporter activity (GO:1901683);; Biological Process: arsenate ion transmembrane transport (GO:1901684);; ","K08176|0|brp:103848815|K08176 MFS transporter, PHS family, inorganic phosphate transporter | (RefSeq) probable inorganic phosphate transporter 1-3","--","[P]","Inorganic ion transport and metabolism","Sugar (and other) transporter;; Major Facilitator Superfamily","Probable inorganic phosphate transporter 1-3 OS=Arabidopsis thaliana OX=3702 GN=PHT1-3 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable inorganic phosphate transporter 1-3 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425)"]
["Bra038611","Bra038611",30.39757,2260,12.942362,972,15.108984,1040,2.388559,126,4.516735,230,4.631424,237,{"v":3.84416393544583e-11,"d":"3.84E-11"},-2.7617648124199,"down","[T]","Signal transduction mechanisms","Molecular Function: acid phosphatase activity (GO:0003993);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; ","--","--","[R]","General function prediction only","Calcineurin-like phosphoesterase","Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana OX=3702 GN=PAP29 PE=2 SV=1","S","Function unknown","PREDICTED: probable inactive purple acid phosphatase 29 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell junction (GO:0030054);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)"]
["Bra034312","Bra034312",1.207574,133,0.694031,85,1.457266,161,7.315996,577,4.284886,329,5.320758,420,{"v":5.29800690727099e-05,"d":"5.30E-05"},1.68724469453627,"up","[T]","Signal transduction mechanisms","Molecular Function: phosphorelay sensor kinase activity (GO:0000155);; Biological Process: phosphorelay signal transduction system (GO:0000160);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: 3-phosphoinositide-dependent protein kinase activity (GO:0004676);; Molecular Function: structural molecule activity (GO:0005198);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: microtubule (GO:0005874);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: RNA processing (GO:0006396);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: microtubule-based movement (GO:0007018);; Biological Process: response to cold (GO:0009409);; Cellular Component: plastid (GO:0009536);; Biological Process: phototropism (GO:0009638);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to salt stress (GO:0009651);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to sucrose (GO:0009744);; Biological Process: blue light signaling pathway (GO:0009785);; Molecular Function: blue light photoreceptor activity (GO:0009882);; Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);; Biological Process: chloroplast avoidance movement (GO:0009903);; Biological Process: chloroplast accumulation movement (GO:0009904);; Biological Process: flower development (GO:0009908);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: positive gravitropism (GO:0009958);; Cellular Component: cell surface (GO:0009986);; Biological Process: response to red light (GO:0010114);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of proton transport (GO:0010155);; Molecular Function: FMN binding (GO:0010181);; Biological Process: response to far red light (GO:0010218);; Biological Process: negative regulation of anion channel activity by blue light (GO:0010362);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Molecular Function: phosphatidylinositol binding (GO:0035091);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: positive regulation of protein kinase activity (GO:0045860);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: root hair initiation (GO:0048766);; Biological Process: root hair elongation (GO:0048767);; Biological Process: cotyledon development (GO:0048825);; Molecular Function: phosphatidic acid binding (GO:0070300);; Biological Process: response to karrikin (GO:0080167);; ","--","--","[R]","General function prediction only","Protein kinase domain;; Protein tyrosine kinase","Protein kinase PINOID 2 OS=Arabidopsis thaliana OX=3702 GN=PID2 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: protein kinase PINOID 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra020511","Bra020511",103.899394,7637,46.853109,3488,52.587899,3540,9.349019,541,2.327427,117,4.395505,257,{"v":6.03305189784749e-12,"d":"6.03E-12"},-3.79553433172226,"down","[T]","Signal transduction mechanisms","Cellular Component: chloroplast (GO:0009507);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: para-aminobenzoic acid metabolic process (GO:0046482);; ","--","--","--","--","Prolyl oligopeptidase family;; Alpha/beta hydrolase family;; Acetyl xylan esterase (AXE1);; Dienelactone hydrolase family","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103854738 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra031048","Bra031048",226.195999,16808,147.923965,11092,131.432251,9035,103.393318,5436,71.781235,3633,61.934944,3154,{"v":9.32180290150285e-08,"d":"9.32E-08"},-1.59626128868472,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: actin filament-based movement (GO:0030048);; ","--","--","--","--","Protein BYPASS1-related","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842681 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: biological regulation (GO:0065007)"]
["Bra031630","Bra031630",42.475063,1896,24.717863,1114,28.522026,1178,13.28486,420,29.019791,882,23.206905,710,0.00594965708958501,-1.05430977149781,"down","--","--","Molecular Function: copper ion binding (GO:0005507);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: electron carrier activity (GO:0009055);; Cellular Component: anchored component of membrane (GO:0031225);; ","--","--","--","--","Plastocyanin-like domain","--","S","Function unknown","early nodulin-like protein 1 [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: electron carrier activity (GO:0009055);; cellular component: membrane part (GO:0044425)"]
["Bra018691","Bra018691",39.141857,790,32.142044,655,24.209755,452,24.452307,350,15.045144,207,13.073259,181,0.000173572488082166,-1.36571081589937,"down","--","--","--","K11254|1.24465e-50|zma:103634846|K11254 histone H4 | (RefSeq) histone H4","--","[B]","Chromatin structure and dynamics","Centromere kinetochore component CENP-T histone fold;; TATA box binding protein associated factor (TAF)","Histone H4 OS=Glycine max OX=3847 PE=3 SV=1","B","Chromatin structure and dynamics","histone H4 [Zea mays]","--"]
["Bra016426","Bra016426",9.701902,1371,10.037702,1431,10.42601,1371,1.187779,121,1.04577,102,1.740098,173,{"v":2.52887983805011e-33,"d":"2.53E-33"},-3.40491660729782,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: defense response (GO:0006952);; Biological Process: cell surface receptor signaling pathway (GO:0007166);; Biological Process: oligosaccharide metabolic process (GO:0009311);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: response to virus (GO:0009615);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: cellular water homeostasis (GO:0009992);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Molecular Function: polysaccharide binding (GO:0030247);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: plant ovule development (GO:0048481);; Biological Process: lateral root development (GO:0048527);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Protein tyrosine kinase;; Protein kinase domain;; Wall-associated receptor kinase galacturonan-binding;; Calcium-binding EGF domain;; Complement Clr-like EGF-like","Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: wall-associated receptor kinase 1-like isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra002733","Bra002733",2.361818,400,2.407299,414,2.913611,434,15.868894,1585,12.693621,1267,12.875385,1173,{"v":5.99240444557715e-12,"d":"5.99E-12"},1.61003099792816,"up","[P]","Inorganic ion transport and metabolism","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuole (GO:0005773);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: protein glycosylation (GO:0006486);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Molecular Function: hydrogen-exporting ATPase activity, phosphorylative mechanism (GO:0008553);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to nitrate (GO:0010167);; Biological Process: nitrate transport (GO:0015706);; Biological Process: ATP hydrolysis coupled proton transport (GO:0015991);; Biological Process: proton transport (GO:0015992);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: amino acid import (GO:0043090);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K01535|0|brp:103845176|K01535 H+-transporting ATPase [EC:3.6.3.6] | (RefSeq) ATPase 3, plasma membrane-type","Oxidative phosphorylation (ko00190)","[P]","Inorganic ion transport and metabolism","E1-E2 ATPase;; haloacid dehalogenase-like hydrolase;; Cation transporter/ATPase, N-terminus;; Cation transport ATPase (P-type)","ATPase 3, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=AHA3 PE=1 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: ATPase 3, plasma membrane-type [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra037285","Bra037285",2.392492,437,3.144222,588,3.332662,659,1.597338,177,0.365281,67,0.389211,68,{"v":3.00137218777327e-06,"d":"3.00E-06"},-2.40443833452352,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Molecular Function: tetracycline transporter activity (GO:0008493);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: glucuronoxylan metabolic process (GO:0010413);; Cellular Component: membrane (GO:0016020);; Biological Process: single-organism transport (GO:0044765);; Biological Process: xylan biosynthetic process (GO:0045492);; ","--","--","[R]","General function prediction only","Major Facilitator Superfamily","--","G","Carbohydrate transport and metabolism","PREDICTED: tetracycline resistance protein, class A-like isoform X1 [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Brassica_rapa_newGene_7205","--",0.595594,66,0.82401,93,0.664974,68,2.425003,178,2.019999,150,3.253868,250,0.00244470469691371,1.25226938260365,"up","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Molecular Function: Rab guanyl-nucleotide exchange factor activity (GO:0017112);; Cellular Component: TRAPP complex (GO:0030008);; Biological Process: positive regulation of GTPase activity (GO:0043547);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","--","--","U","Intracellular trafficking, secretion, and vesicular transport","uncharacterized protein LOC106420295 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: guanyl-nucleotide exchange factor activity (GO:0005085);; cellular component: macromolecular complex (GO:0032991)"]
["Bra015146","Bra015146",11.117916,1038,14.807069,1351,18.157845,1527,13.587445,877,8.899156,556,8.083606,495,0.00464831766530142,-1.08014430463202,"down","[P]","Inorganic ion transport and metabolism","--","--","--","--","--","CorA-like Mg2+ transporter protein","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103828536 [Brassica rapa] ","--"]
["Bra001516","Bra001516",332.850983,12076,328.710693,12035,271.416199,9110,104.035027,2671,39.924599,987,36.503475,908,{"v":6.24404077146219e-10,"d":"6.24E-10"},-2.81025819264149,"down","--","--","Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: tRNA aminoacylation for protein translation (GO:0006418);; Biological Process: polyamine catabolic process (GO:0006598);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: lignan biosynthetic process (GO:0009807);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Biological Process: plant ovule development (GO:0048481);; Biological Process: organic hydroxy compound biosynthetic process (GO:1901617);; ","--","--","--","--","Dirigent-like protein","Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1","--","--","PREDICTED: dirigent protein 7 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra014501","Bra014501",4.505844,181,16.518955,670,16.772762,624,0.932028,27,0.863706,24,0.039033,2,{"v":1.47522021248134e-07,"d":"1.48E-07"},-4.27385636103876,"down","--","--","--","--","--","--","--","Plastocyanin-like domain","Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1","S","Function unknown","PREDICTED: uclacyanin-3 [Brassica rapa] ","--"]
["Bra032587","Bra032587",17.903687,2593,29.035448,3163,31.264156,3041,15.861081,1635,12.963684,1237,13.742502,1335,{"v":7.89962797382917e-06,"d":"7.90E-06"},-1.12201308772729,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: autophagy (GO:0006914);; Biological Process: response to water deprivation (GO:0009414);; ","--","--","--","--","Drought induced 19 protein (Di19), zinc-binding;; Stress-induced protein Di19, C-terminal","Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=DI19-2 PE=1 SV=1","S","Function unknown","PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 2-like [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra022261","Bra022261",10.368148,2499,11.561967,2730,16.508748,3468,6.678025,1266,7.326238,1123,7.327515,1134,{"v":7.92183882946105e-07,"d":"7.92E-07"},-1.36253391884814,"down","[K]","Transcription","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: intracellular part (GO:0044424);; ","--","--","[R]","General function prediction only","Leucine Rich repeats (2 copies);; Leucine-rich repeat","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103869628 isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra023510","Bra023510",127.544952,2995,52.020061,1233,161.093124,3499,16.044504,267,13.604405,218,14.626361,236,{"v":7.0217616945432e-15,"d":"7.02E-15"},-3.36739435872027,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103850974 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra014209","Bra014209",3.0744,301,1.592843,155,0.996592,93,6.93705,475,7.573926,535,8.594434,575,0.000530541496206659,1.48959053522869,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: phospholipase C activity (GO:0004629);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: intracellular signal transduction (GO:0035556);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","--","--","PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana OX=3702 GN=At5g67130 PE=1 SV=1","S","Function unknown","PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425)"]
["Bra035689","Bra035689",0.132816,7,0.043871,3,0,0,1.412632,46,2.619001,82,2.550294,81,{"v":5.63448106086218e-06,"d":"5.63E-06"},3.79536849718942,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: photosystem II oxygen evolving complex (GO:0009654);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: photosynthesis (GO:0015979);; Cellular Component: extrinsic component of membrane (GO:0019898);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: photosynthetic membrane (GO:0034357);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","--","--","PsbP","PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD2 PE=1 SV=1","S","Function unknown","PREDICTED: psbP domain-containing protein 2, chloroplastic [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)"]
["Bra021283","Bra021283",4.796207,298,4.042394,252,3.71697,228,13.774079,641,18.27513,781,16.873426,749,{"v":1.8058302952208e-13,"d":"1.81E-13"},1.42929287312191,"up","[O]","Posttranslational modification, protein turnover, chaperones","Cellular Component: mitochondrion (GO:0005739);; Biological Process: respiratory chain complex IV assembly (GO:0008535);; Cellular Component: membrane (GO:0016020);; ","K14998|0|brp:103838929|K14998 surfeit locus 1 family protein | (RefSeq) surfeit locus protein 1-like","--","[C]","Energy production and conversion","SURF1 family","Surfeit locus protein 1 OS=Arabidopsis thaliana OX=3702 GN=SURF1 PE=2 SV=1","S","Function unknown","PREDICTED: surfeit locus protein 1-like isoform X2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)"]
["Bra017985","Bra017985",0.442352,52,0.346803,43,0.254953,29,2.660794,192,2.378752,167,2.124829,161,{"v":1.70936286413264e-09,"d":"1.71E-09"},1.99520188119162,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: phosphate ion transport (GO:0006817);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular response to phosphate starvation (GO:0016036);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","--","Phosphate transporter PHO1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=PHO1-H9 PE=2 SV=1","--","--","BnaA06g15920D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra031382","Bra031382",18.101144,1526,32.01357,2704,21.607555,1602,14.198352,826,9.930593,561,11.737595,651,{"v":1.49834232387079e-05,"d":"1.50E-05"},-1.55104290477432,"down","[T]","Signal transduction mechanisms","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: plastid (GO:0009536);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: red light signaling pathway (GO:0010161);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: interspecies interaction between organisms (GO:0044419);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C;; Stage II sporulation protein E (SpoIIE)","Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana OX=3702 GN=At1g22280 PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 9 isoform X1 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra020221","Bra020221",1.604068,195,1.566056,198,1.464968,165,0,0,0,0,0,0,{"v":1.11077881470535e-18,"d":"1.11E-18"},-7.82644237361519,"down","--","--","Molecular Function: carboxypeptidase activity (GO:0004180);; Cellular Component: extracellular region (GO:0005576);; Biological Process: proteolysis (GO:0006508);; Molecular Function: serine-type peptidase activity (GO:0008236);; Cellular Component: chloroplast (GO:0009507);; ","K01285|5.55128e-89|bna:106410630|K01285 lysosomal Pro-X carboxypeptidase [EC:3.4.16.2] | (RefSeq) lysosomal Pro-X carboxypeptidase-like","--","[OR]","Posttranslational modification, protein turnover, chaperones;; General function prediction only","Serine carboxypeptidase S28","--","S","Function unknown","lysosomal Pro-X carboxypeptidase-like [Brassica napus] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra014342","Bra014342",0.515639,49,0.515986,50,0.819265,72,1.960644,132,2.925579,189,4.538363,278,0.000775298635615566,1.66588325897559,"up","[U]","Intracellular trafficking, secretion, and vesicular transport","Biological Process: maltose metabolic process (GO:0000023);; Biological Process: rRNA processing (GO:0006364);; Biological Process: protein secretion (GO:0009306);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Biological Process: chloroplast relocation (GO:0009902);; Molecular Function: proton motive force dependent protein transmembrane transporter activity (GO:0009977);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: photosystem II assembly (GO:0010207);; Biological Process: starch biosynthetic process (GO:0019252);; Cellular Component: integral component of thylakoid membrane (GO:0031361);; Cellular Component: TAT protein transport complex (GO:0033281);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: transcription from plastid promoter (GO:0042793);; Cellular Component: receptor complex (GO:0043235);; Biological Process: protein transport by the Tat complex (GO:0043953);; Biological Process: protein import into chloroplast thylakoid membrane (GO:0045038);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K03118|1.52973e-172|brp:103832770|K03118 sec-independent protein translocase protein TatC | (RefSeq) sec-independent protein translocase protein TATC, chloroplastic-like","Protein export (ko03060)","--","--","Sec-independent protein translocase protein (TatC)","Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: sec-independent protein translocase protein TATC, chloroplastic-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991);; biological process: biological regulation (GO:0065007)"]
["Bra008806","Bra008806",164.224729,9370,312.449665,18007,312.209603,16574,51.82503,2123,27.105733,1083,28.278307,1166,{"v":8.94563787018003e-15,"d":"8.95E-15"},-3.31124071474879,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: xylem development (GO:0010089);; Biological Process: response to chitin (GO:0010200);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Molecular Function: xyloglucan-specific endo-beta-1,4-glucanase activity (GO:0033946);; Biological Process: cell wall modification (GO:0042545);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: primary root development (GO:0080022);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0080039);; ","K08235|0|brp:103846545|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) probable xyloglucan endotransglucosylase/hydrolase protein 23","--","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra004196","Bra004196",3.020024,95,2.21692,70,2.371348,69,8.668645,192,12.913454,275,10.45574,224,{"v":1.59777058240804e-06,"d":"1.60E-06"},1.49957370591635,"up","--","--","Cellular Component: mitochondrion (GO:0005739);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103831141 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra026534","Bra026534",0.978003,56,0.269157,16,0.482268,26,5.941306,239,4.089833,158,3.089651,120,{"v":8.15053038617017e-05,"d":"8.15E-05"},2.2543262032246,"up","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["Bra023902","Bra023902",4.756358,481,3.616309,347,4.010927,354,10.995326,767,11.766807,790,13.451235,895,{"v":1.10876983538287e-07,"d":"1.11E-07"},1.00790269873256,"up","[P]","Inorganic ion transport and metabolism","Molecular Function: pyridoxamine-phosphate oxidase activity (GO:0004733);; Cellular Component: nucleus (GO:0005634);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: FMN binding (GO:0010181);; Biological Process: pyridoxal phosphate biosynthetic process (GO:0042823);; Biological Process: oxidation-reduction process (GO:0055114);; ","--","--","--","--","Pyridoxamine 5'-phosphate oxidase;; Pyridoxamine 5'-phosphate oxidase","--","P","Inorganic ion transport and metabolism","PREDICTED: uncharacterized protein LOC103835405 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)"]
["Bra012747","Bra012747",4.283423,284,6.058268,406,5.139156,317,1.115049,53,1.571589,101,1.657831,76,{"v":1.59629558787302e-07,"d":"1.60E-07"},-2.12978523406146,"down","[HR]","Coenzyme transport and metabolism;; General function prediction only","Molecular Function: epoxide hydrolase activity (GO:0004301);; Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Biological Process: metabolic process (GO:0008152);; ","--","--","[I]","Lipid transport and metabolism","Alpha/beta hydrolase family;; alpha/beta hydrolase fold;; Serine aminopeptidase, S33","--","S","Function unknown","PREDICTED: bifunctional epoxide hydrolase 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra019690","Bra019690",42.494315,7364,108.496418,19055,125.209332,20592,36.360248,4568,33.197103,4068,36.466529,4348,{"v":7.23452685148272e-05,"d":"7.23E-05"},-1.88865177978945,"down","--","--","--","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","EXS family;; SPX domain","Phosphate transporter PHO1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=PHO1;H3 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: phosphate transporter PHO1 homolog 3 isoform X1 [Brassica rapa]","--"]
["Bra011456","Bra011456",6.044101,480,6.155449,501,6.185393,461,17.784057,1010,22.56885,1236,24.950604,1362,{"v":3.75747589619142e-08,"d":"3.76E-08"},1.257725477785,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; ","--","--","[O]","Posttranslational modification, protein turnover, chaperones","COPI associated protein","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103845772 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422)"]
["Bra016835","Bra016835",2.698357,123,1.26366,60,1.237644,52,6.794811,218,6.794245,211,4.560378,142,0.00608839554043189,1.23034688353643,"up","--","--","Molecular Function: binding (GO:0005488);; Biological Process: rRNA processing (GO:0006364);; Biological Process: tRNA metabolic process (GO:0006399);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: RNA modification (GO:0009451);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: chloroplast RNA modification (GO:1900865);; ","--","--","--","--","--","Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1","S","Function unknown","PREDICTED: multiple organellar RNA editing factor 9, chloroplastic [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007)"]
["Bra036315","Bra036315",0.779492,96,1.098874,123,1.276859,92,5.408893,452,3.695983,294,4.394658,352,{"v":9.64970784155948e-08,"d":"9.65E-08"},1.72805549646189,"up","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cation transport (GO:0006812);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: amino acid transport (GO:0006865);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: response to wounding (GO:0009611);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to 1-aminocyclopropane-1-carboxylic acid (GO:0009961);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: response to nitrate (GO:0010167);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to organic cyclic compound (GO:0014070);; Biological Process: nitrate transport (GO:0015706);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 47 OS=Arabidopsis thaliana OX=3702 GN=WRKY47 PE=1 SV=2","K","Transcription","probable WRKY transcription factor 47 [Brassica rapa] ","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152)"]
["Bra031900","Bra031900",7.370478,359,6.912326,332,7.515658,335,1.752747,53,0.041653,3,1.069266,44,0.000117125035595592,-3.02965939059954,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: amino acid transport (GO:0006865);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to wounding (GO:0009611);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: longitudinal axis specification (GO:0009942);; Biological Process: response to 1-aminocyclopropane-1-carboxylic acid (GO:0009961);; Biological Process: vegetative phase change (GO:0010050);; Biological Process: response to chitin (GO:0010200);; Biological Process: heat acclimation (GO:0010286);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: establishment of cell polarity (GO:0030010);; Biological Process: regulation of response to nutrient levels (GO:0032107);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: cellular response to heat (GO:0034605);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: defense response to bacterium (GO:0042742);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: regulation of DNA-templated transcription in response to stress (GO:0043620);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: lateral root development (GO:0048527);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 PE=1 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 51 isoform X1 [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152)"]
["Bra029394","Bra029394",13.399551,341,8.324098,208,9.621538,236,7.779943,161,2.101175,47,4.380554,81,0.00973356504066133,-1.41169726369311,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","--","--","S","Function unknown","BnaC02g41380D [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra014426","Bra014426",24.692846,1562,24.116752,1538,31.881491,1697,10.144137,486,15.833319,770,16.567432,747,{"v":1.13464984520035e-05,"d":"1.13E-05"},-1.29940751754661,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: response to ozone (GO:0010193);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to lipid (GO:0033993);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of innate immune response (GO:0045088);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 46 OS=Arabidopsis thaliana OX=3702 GN=WRKY46 PE=2 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 46 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052)"]
["Brassica_rapa_newGene_4372","--",2.295148,337,4.231124,630,3.480475,439,1.696578,211,1.034096,135,0.955199,111,0.000237149228160132,-1.64357929066931,"down","[P]","Inorganic ion transport and metabolism","Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: single fertilization (GO:0007338);; Biological Process: pollen development (GO:0009555);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: calcium ion transmembrane transport (GO:0070588);; ","K01537|0|bna:106424376|K01537 Ca2+-transporting ATPase [EC:3.6.3.8] | (RefSeq) calcium-transporting ATPase 9, plasma membrane-type-like","--","[P]","Inorganic ion transport and metabolism","E1-E2 ATPase;; haloacid dehalogenase-like hydrolase;; Ca2+-ATPase N terminal autoinhibitory domain;; Cation transport ATPase (P-type);; Cation transporter/ATPase, N-terminus","Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA9 PE=2 SV=2","P","Inorganic ion transport and metabolism","PREDICTED: calcium-transporting ATPase 9, plasma membrane-type isoform X2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: organelle (GO:0043226)"]
["Bra028988","Bra028988",126.43708,13050,41.037281,4275,37.667046,3597,40.262379,2940,15.572957,1095,13.5097,956,0.00135522551430808,-1.92723640293373,"down","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: DNA methylation (GO:0006306);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: cell communication (GO:0007154);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: pollen exine formation (GO:0010584);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: regulation of cell proliferation (GO:0042127);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; Molecular Function: cation binding (GO:0043169);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: floral organ formation (GO:0048449);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","--","--","--","--","Glycosyl hydrolases family 17;; Stigma-specific protein, Stig1;; X8 domain","Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=1 SV=2","G","Carbohydrate transport and metabolism","PREDICTED: glucan endo-1,3-beta-glucosidase 12-like isoform X2 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: membrane part (GO:0044425)"]
["Bra006937","Bra006937",1.5153,118,1.369096,108,1.145722,83,5.070914,280,10.328025,548,7.767048,415,{"v":2.10474443069875e-07,"d":"2.10E-07"},1.92503319449334,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103841192 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)"]
["Bra031554","Bra031554",58.550106,1420,113.990036,2790,95.749252,2149,18.661364,321,2.683297,45,14.903915,248,{"v":1.29691038024361e-06,"d":"1.30E-06"},-3.18869388343002,"down","--","--","Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to organic substance (GO:0010033);; ","--","--","--","--","--","--","--","--","BnaC08g45150D [Brassica napus]","biological process: response to stimulus (GO:0050896)"]
["Bra030196","Bra030196",96.136437,8835,147.39524,13312,116.00325,10893,45.275129,2921,17.266998,960,19.957656,1150,{"v":2.94273286161458e-08,"d":"2.94E-08"},-2.68082083434274,"down","[D]","Cell cycle control, cell division, chromosome partitioning","Biological Process: barrier septum assembly (GO:0000917);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; ","K03978|0|brp:103864399|K03978 GTP-binding protein | (RefSeq) GTP-binding protein At2g22870","--","[R]","General function prediction only","50S ribosome-binding GTPase;; Ferrous iron transport protein B","GTP-binding protein At2g22870 OS=Arabidopsis thaliana OX=3702 GN=EMB2001 PE=2 SV=2","S","Function unknown","PREDICTED: GTP-binding protein At2g22870 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra005189","Bra005189",1.336888,38,0.772119,22,1.264709,33,5.181813,104,7.397033,142,5.371324,104,{"v":2.68708035527259e-05,"d":"2.69E-05"},1.8096171225886,"up","[J]","Translation, ribosomal structure and biogenesis","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: alternative mRNA splicing, via spliceosome (GO:0000380);; Molecular Function: transcription antitermination factor activity, RNA binding (GO:0001072);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: endosome (GO:0005768);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: rRNA processing (GO:0006364);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Molecular Function: poly(U) RNA binding (GO:0008266);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: plastid (GO:0009536);; Biological Process: embryo sac development (GO:0009553);; Biological Process: pollen development (GO:0009555);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: cold acclimation (GO:0009631);; Biological Process: response to salt stress (GO:0009651);; Biological Process: etioplast organization (GO:0009662);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: seed germination (GO:0009845);; Biological Process: negative regulation of flower development (GO:0009910);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: response to chitin (GO:0010200);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Cellular Component: stromule (GO:0010319);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: histone H3-K36 methylation (GO:0010452);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: positive regulation of histone methylation (GO:0031062);; Biological Process: transcription antitermination (GO:0031564);; Biological Process: DNA duplex unwinding (GO:0032508);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of circadian rhythm (GO:0042754);; Molecular Function: histone methyltransferase activity (H3-K4 specific) (GO:0042800);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: carotenoid isomerase activity (GO:0046608);; Biological Process: response to cadmium ion (GO:0046686);; Molecular Function: histone methyltransferase activity (H3-K36 specific) (GO:0046975);; Cellular Component: apoplast (GO:0048046);; Biological Process: plant ovule development (GO:0048481);; Biological Process: anther development (GO:0048653);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[R]","General function prediction only","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Organelle RRM domain-containing protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ORRM2 PE=1 SV=1","S","Function unknown","PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like [Camelina sativa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; cellular component: extracellular region (GO:0005576)"]
["Bra006708","Bra006708",3.52038,362,3.620454,368,3.749863,353,2.326428,169,2.858374,209,2.575991,178,{"v":3.99225356349786e-05,"d":"3.99E-05"},-1.00696181070315,"down","--","--","Molecular Function: histone acetyltransferase activity (GO:0004402);; Cellular Component: nucleus (GO:0005634);; Biological Process: histone acetylation (GO:0016573);; ","--","--","[R]","General function prediction only","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103856622 isoform X1 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra032756","Bra032756",0,0,0.016904,3,0.03023,4,1.441556,118,4.659162,369,4.74776,374,{"v":1.35079287222274e-14,"d":"1.35E-14"},5.95441303107865,"up","[R]","General function prediction only","Biological Process: sulfate assimilation (GO:0000103);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Molecular Function: selenium binding (GO:0008430);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: polar nucleus fusion (GO:0010197);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: cellular response to selenium ion (GO:0071291);; ","K17285|0|brp:103863568|K17285 selenium-binding protein 1 | (RefSeq) selenium-binding protein 2","--","[P]","Inorganic ion transport and metabolism","56kDa selenium binding protein (SBP56)","Selenium-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=SBP2 PE=1 SV=1","S","Function unknown","PREDICTED: selenium-binding protein 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Brassica_rapa_newGene_18318","--",7.816289,667,16.714894,1439,17.18757,1356,2.463166,150,2.831322,166,3.095641,182,{"v":5.72563001019397e-11,"d":"5.73E-11"},-2.79662487051858,"down","--","--","--","--","--","--","--","--","--","--","--","glycine-rich protein A3 isoform X1 [Brassica napus] ","--"]
["Bra007099","Bra007099",145.913239,9224,104.107107,6646,99.621618,6014,66.919823,3005,38.663029,1689,38.639401,1700,{"v":3.20452162037594e-09,"d":"3.20E-09"},-1.78429993860718,"down","--","--","Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: seed germination (GO:0009845);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","[K]","Transcription","GATA zinc finger","GATA transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=GATA8 PE=2 SV=1","K","Transcription","PREDICTED: GATA transcription factor 8 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: rhythmic process (GO:0048511);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)"]
["Bra010099","Bra010099",55.632651,6795,58.105326,7176,57.841044,6465,37.779963,3240,26.082424,2167,29.59497,2456,{"v":2.85771127312782e-10,"d":"2.86E-10"},-1.4246505489411,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: defense response by callose deposition (GO:0052542);; ","--","--","--","--","Calmodulin binding protein-like","Calmodulin-binding protein 60 A OS=Arabidopsis thaliana OX=3702 GN=CBP60A PE=2 SV=1","S","Function unknown","PREDICTED: calmodulin-binding protein 60 A [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra034367","Bra034367",6.284297,398,13.207968,843,16.1887,948,7.14067,320,2.967091,128,2.096452,91,0.0014118861368945,-1.99154182227504,"down","--","--","Cellular Component: chloroplast (GO:0009507);; ","--","--","--","--","Plant protein of unknown function (DUF868)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103864800 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra002932","Bra002932",1.756199,56,2.87409,92,3.462442,101,0.08843,2,0,0,0,0,{"v":1.58501035940899e-10,"d":"1.59E-10"},-5.65434770332592,"down","[R]","General function prediction only","Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","Stigma-specific protein, Stig1","Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1","S","Function unknown","PREDICTED: stigma-specific STIG1-like protein 2 [Brassica rapa] ","cellular component: extracellular region (GO:0005576)"]
["Bra001813","Bra001813",1.663702,149,0.919624,83,1.06884,89,4.10184,260,5.217441,318,3.67792,226,0.000172363738318087,1.2742845659308,"up","[S]","Function unknown","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: ion binding (GO:0043167);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: chromosome organization (GO:0051276);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","[R]","General function prediction only","Galactose oxidase, central domain;; Galactose oxidase, central domain;; Kelch motif;; Kelch motif;; Kelch motif;; Kelch motif;; F-box domain","F-box/kelch-repeat protein At1g51550 OS=Arabidopsis thaliana OX=3702 GN=At1g51550 PE=2 SV=1","S","Function unknown","PREDICTED: F-box/kelch-repeat protein At1g51550 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra027410","Bra027410",22.526073,826,56.73222,2100,47.222984,1602,2.979808,78,15.265847,382,9.81164,247,{"v":6.66275540487781e-05,"d":"6.66E-05"},-2.56100708012538,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: polyamine catabolic process (GO:0006598);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: lignan biosynthetic process (GO:0009807);; Biological Process: actin filament-based movement (GO:0030048);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; ","--","--","--","--","Dirigent-like protein","Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1","S","Function unknown","PREDICTED: dirigent protein 7-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: organelle (GO:0043226);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: single-organism process (GO:0044699)"]
["Bra019537","Bra019537",1.620394,169,2.636506,272,2.718837,258,0.189855,15,0,0,0,0,0.000117755667188728,-4.12819037335546,"down","[T]","Signal transduction mechanisms","--","K08867|0|brp:103873542|K08867 WNK lysine deficient protein kinase [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase WNK3","--","[R]","General function prediction only","Protein kinase domain;; Protein tyrosine kinase;; Oxidative-stress-responsive kinase 1 C-terminal domain","Probable serine/threonine-protein kinase WNK3 OS=Arabidopsis thaliana OX=3702 GN=WNK3 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable serine/threonine-protein kinase WNK3 [Brassica rapa]","--"]
["Bra020448","Bra020448",0.267038,13,0.272014,14,0.045974,3,3.446078,93,7.646232,204,7.210951,205,{"v":8.31011729708132e-09,"d":"8.31E-09"},3.7338097129332,"up","--","--","Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: divalent metal ion transport (GO:0070838);; ","--","--","--","--","Protein of unknown function (DUF1517)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103851718 [Brassica rapa] ","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra005676","Bra005676",1.169341,59,4.041992,191,3.101224,140,0.944032,27,1.053471,45,0.402967,19,0.00316943410805375,-2.0191821582119,"down","--","--","--","--","--","--","--","Protein of unknown function, DUF538","Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At5g01610 [Brassica rapa]","--"]
["Bra017066","Bra017066",30.269143,1040,48.288036,1708,68.146017,2202,28.938934,757,18.51303,440,23.891251,557,0.000522741463513841,-1.54504085405521,"down","--","--","--","--","--","--","--","Domain of unknown function (DUF588)","CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1","S","Function unknown","PREDICTED: CASP-like protein 4D2 [Brassica rapa]","--"]
["Bra014178","Bra014178",3.293412,50,2.543276,39,3.30529,47,9.457714,102,19.887754,205,19.248981,200,0.000121316255748933,1.78434802154921,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: protein folding (GO:0006457);; Cellular Component: prefoldin complex (GO:0016272);; Molecular Function: unfolded protein binding (GO:0051082);; ","--","--","--","--","Prefoldin subunit","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103832954 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488)"]
["Bra000718","Bra000718",2.839546,288,2.358561,256,3.004517,274,0.366621,26,0.048044,5,0.229103,18,{"v":1.84751054876291e-12,"d":"1.85E-12"},-3.88945158934176,"down","[I]","Lipid transport and metabolism","Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: regulation of abscisic acid biosynthetic process (GO:0010115);; Biological Process: cutin biosynthetic process (GO:0010143);; Molecular Function: hydrolase activity (GO:0016787);; Cellular Component: obsolete plant extracellular matrix (GO:0048196);; ","--","--","[R]","General function prediction only","alpha/beta hydrolase fold;; Serine aminopeptidase, S33;; Alpha/beta hydrolase family;; Serine hydrolase","Probable lysophospholipase BODYGUARD 3 OS=Arabidopsis thaliana OX=3702 GN=BDG3 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103858575 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular matrix (GO:0031012)"]
["Bra014309","Bra014309",11.564731,2675,0.821635,189,0.929401,199,0.507623,85,0.73958,119,0.857065,141,0.0026171821299124,-2.62469997899631,"down","--","--","Molecular Function: peptide receptor activity (GO:0001653);; Molecular Function: copper ion binding (GO:0005507);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: cytosol (GO:0005829);; Biological Process: gluconeogenesis (GO:0006094);; Biological Process: glycolytic process (GO:0006096);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: water transport (GO:0006833);; Biological Process: defense response (GO:0006952);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: Golgi organization (GO:0007030);; Biological Process: cell adhesion (GO:0007155);; Cellular Component: proteasome regulatory particle, base subcomplex (GO:0008540);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to heat (GO:0009408);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to sucrose (GO:0009744);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: photorespiration (GO:0009853);; Biological Process: flower development (GO:0009908);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: leaf senescence (GO:0010150);; Cellular Component: membrane (GO:0016020);; Biological Process: glucosinolate catabolic process (GO:0019762);; Biological Process: metal ion transport (GO:0030001);; Molecular Function: enzyme regulator activity (GO:0030234);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: stamen formation (GO:0048455);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: root hair elongation (GO:0048767);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: nitrile biosynthetic process (GO:0080028);; Biological Process: proteasome core complex assembly (GO:0080129);; ","--","--","--","--","Jacalin-like lectin domain","Myrosinase-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=F-ATMBP PE=2 SV=1","S","Function unknown","PREDICTED: myrosinase-binding protein 2-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological adhesion (GO:0022610);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414);; cellular component: membrane (GO:0016020);; molecular function: enzyme regulator activity (GO:0030234);; biological process: growth (GO:0040007)"]
["Bra011320","Bra011320",7.046247,1456,12.420867,2593,17.766074,2447,4.625137,671,3.235957,393,0.695958,83,0.000498194615991503,-2.38345476164484,"down","--","--","Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Biological Process: response to stress (GO:0006950);; Biological Process: toxin catabolic process (GO:0009407);; Biological Process: response to cyclopentenone (GO:0010583);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","--","--","[ODR]","Posttranslational modification, protein turnover, chaperones;; Cell cycle control, cell division, chromosome partitioning;; General function prediction only","PB1 domain;; TPR repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Protein PHOX1 OS=Arabidopsis thaliana OX=3702 GN=PHOX1 PE=1 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: uncharacterized protein LOC103851302 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra009844","Bra009844",1.663457,90,1.814483,81,1.657392,65,7.706641,274,5.883731,205,6.651978,199,{"v":8.72415680226425e-07,"d":"8.72E-07"},1.45614271826607,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","[R]","General function prediction only","Zn-finger in Ran binding protein and others","--","S","Function unknown","PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)"]
["Bra001975","Bra001975",9.31305,1095,3.562947,415,3.991788,428,33.358019,2651,47.208578,3774,45.068716,3540,{"v":7.40539454823069e-09,"d":"7.41E-09"},2.30363957713453,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","--","F-box protein At2g16365 OS=Arabidopsis thaliana OX=3702 GN=At2g16365 PE=2 SV=2","S","Function unknown","PREDICTED: F-box protein At2g16365 isoform X1 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896)"]
["Bra019746","Bra019746",7.305208,630,7.019061,612,7.315696,576,20.456117,1222,25.292045,1489,34.039096,1986,{"v":1.6513487223152e-06,"d":"1.65E-06"},1.30227012616851,"up","--","--","--","--","--","--","--","Plant protein of unknown function (DUF863)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103872024 [Brassica rapa]","--"]
["Bra013042","Bra013042",2.90072,230,6.0215,479,5.19277,373,1.750721,116,2.213109,115,3.048477,159,0.000956477318206683,-1.50176739141806,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to chitin (GO:0010200);; Biological Process: amino acid import (GO:0043090);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","Arabidopsis phospholipase-like protein (PEARLI 4)","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103860491 [Brassica rapa]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179)"]
["Bra030459","Bra030459",47.246267,2662,124.729191,7536,128.448892,6501,47.133284,1800,33.123415,1255,36.996101,1326,{"v":5.31296301434398e-05,"d":"5.31E-05"},-1.95315515308111,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: response to sucrose (GO:0009744);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to UV-B (GO:0010224);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Biological Process: cysteine biosynthetic process (GO:0019344);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: iron ion homeostasis (GO:0055072);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH115 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra016712","Bra016712",4.828048,516,10.280856,1101,11.170034,1097,0.607589,52,0.304808,23,0.425022,35,{"v":2.77986187081701e-19,"d":"2.78E-19"},-4.50491228749071,"down","--","--","--","K13681|0|brp:103836084|K13681 xyloglucan fucosyltransferase [EC:2.4.1.-] | (RefSeq) fucosyltransferase 6-like","--","--","--","Xyloglucan fucosyltransferase","Fucosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=FUT6 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: fucosyltransferase 6-like isoform X2 [Brassica rapa]","--"]
["Bra006449","Bra006449",3.306454,245,6.967124,532,8.009623,541,3.254155,164,1.137631,58,1.611564,79,0.000327362473399418,-2.10441543513132,"down","--","--","Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: RNA methylation (GO:0001510);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: primary shoot apical meristem specification (GO:0010072);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: organ boundary specification between lateral organs and the meristem (GO:0010199);; Biological Process: secondary shoot formation (GO:0010223);; Biological Process: heat acclimation (GO:0010286);; Biological Process: positive regulation of cell fate commitment (GO:0010455);; Cellular Component: Cajal body (GO:0015030);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: carpel development (GO:0048440);; Biological Process: regulation of timing of animal organ formation (GO:0048504);; Biological Process: lateral root development (GO:0048527);; Biological Process: root cap development (GO:0048829);; Biological Process: negative regulation of cell division (GO:0051782);; ","--","--","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 87 OS=Arabidopsis thaliana OX=3702 GN=NAC087 PE=2 SV=1","S","Function unknown","PREDICTED: NAC domain-containing protein 92-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422)"]
["Bra005579","Bra005579",4.615884,323,12.218402,844,13.734323,862,2.772826,153,1.905397,129,2.362393,155,{"v":1.24101199511143e-05,"d":"1.24E-05"},-2.217093938299,"down","--","--","Molecular Function: iron ion transmembrane transporter activity (GO:0005381);; Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: zinc II ion transport (GO:0006829);; Biological Process: water transport (GO:0006833);; Biological Process: oligopeptide transport (GO:0006857);; Biological Process: intracellular protein transport (GO:0006886);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to nematode (GO:0009624);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: cadmium ion transport (GO:0015691);; Biological Process: nitrate transport (GO:0015706);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: retrograde transport, endosome to Golgi (GO:0042147);; Biological Process: root hair elongation (GO:0048767);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: zinc II ion transmembrane transport (GO:0071577);; ","K14709|0|brp:103867631|K14709 solute carrier family 39 (zinc transporter), member 1/2/3 | (RefSeq) zinc transporter 3","--","[P]","Inorganic ion transport and metabolism","ZIP Zinc transporter","Zinc transporter 3 OS=Arabidopsis thaliana OX=3702 GN=ZIP3 PE=2 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: zinc transporter 3 [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: immune system process (GO:0002376);; cellular component: membrane part (GO:0044425);; cellular component: organelle (GO:0043226);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra004520","Bra004520",10.095804,535,5.150429,276,6.395905,314,3.457802,130,1.180993,43,1.203044,44,{"v":4.1019922386995e-05,"d":"4.10E-05"},-2.27708028944798,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular component organization (GO:0016043);; Biological Process: single-organism cellular process (GO:0044763);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: serine/arginine repetitive matrix protein 1-like [Brassica rapa]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra034699","Bra034699",0.293352,19,0.107584,7,0.140135,9,1.367482,61,1.712891,74,2.420304,105,{"v":1.28584174116805e-05,"d":"1.29E-05"},2.59127329448204,"up","--","--","Molecular Function: binding (GO:0005488);; Cellular Component: nucleus (GO:0005634);; Biological Process: organelle organization (GO:0006996);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: petal formation (GO:0048451);; Biological Process: sepal formation (GO:0048453);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: establishment of localization (GO:0051234);; ","--","--","--","--","--","WEB family protein At3g13190 OS=Arabidopsis thaliana OX=3702 GN=At3g13190 PE=2 SV=1","S","Function unknown","PREDICTED: WEB family protein At3g13190 isoform X1 [Brassica rapa] ","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)"]
["Bra001634","Bra001634",2.418933,200,3.081483,245,3.220372,237,8.658277,521,16.315052,924,13.472036,823,{"v":4.33131303419084e-06,"d":"4.33E-06"},1.63451518954449,"up","--","--","--","K14484|0|brp:103859673|K14484 auxin-responsive protein IAA | (RefSeq) auxin-responsive protein IAA26-like","Plant hormone signal transduction (ko04075)","--","--","AUX/IAA family","Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=2","K","Transcription","PREDICTED: auxin-responsive protein IAA26-like isoform X2 [Brassica rapa] ","--"]
["Brassica_rapa_newGene_18109","--",1.738276,155,1.246897,144,0.929183,91,5.442515,346,7.256628,486,6.509091,424,{"v":9.29104779672257e-08,"d":"9.29E-08"},1.62918922567215,"up","--","--","Molecular Function: SNARE binding (GO:0000149);; Molecular Function: SNAP receptor activity (GO:0005484);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to vacuole (GO:0006623);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: Golgi to vacuole transport (GO:0006896);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: ER to Golgi transport vesicle membrane (GO:0012507);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: SNARE complex (GO:0031201);; Cellular Component: late endosome membrane (GO:0031902);; Biological Process: retrograde transport, endosome to Golgi (GO:0042147);; Biological Process: vesicle fusion with Golgi apparatus (GO:0048280);; ","K08494|2.20575e-35|eus:EUTSA_v10011716mg|K08494 novel plant SNARE | (RefSeq) hypothetical protein","--","--","--","--","Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1","S","Function unknown","BnaA08g03470D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra038286","Bra038286",51.935963,7034,72.85955,9957,70.29612,8807,35.5215,3403,18.607321,1716,18.494644,1717,{"v":3.67944108529054e-07,"d":"3.68E-07"},-1.94390053316904,"down","[T]","Signal transduction mechanisms","Biological Process: MAPK cascade (GO:0000165);; Biological Process: defense response to oomycetes (GO:0002229);; Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: protein tyrosine kinase activity (GO:0004713);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: iron ion transport (GO:0006826);; Biological Process: membrane fusion (GO:0006944);; Biological Process: cellular response to nitrogen starvation (GO:0006995);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: response to insect (GO:0009625);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Biological Process: response to nitrate (GO:0010167);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: nitrate transport (GO:0015706);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: focal adhesion assembly (GO:0048041);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to salt stress (GO:0071472);; ","--","--","--","--","Legume lectin domain;; Protein kinase domain;; Protein tyrosine kinase","Probable L-type lectin-domain containing receptor kinase I.5 OS=Arabidopsis thaliana OX=3702 GN=LECRK15 PE=2 SV=2","T","Signal transduction mechanisms","PREDICTED: probable L-type lectin-domain containing receptor kinase I.5 isoform X1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra015174","Bra015174",303.936454,27136,338.380577,30495,360.040142,29763,134.661188,8555,91.967743,5622,93.063824,5759,{"v":4.82638828643723e-17,"d":"4.83E-17"},-2.1735941356742,"down","--",null,"Biological Process: RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: amino acid transport (GO:0006865);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: defense response to bacterium, incompatible interaction (GO:0009816);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: protoderm histogenesis (GO:0010068);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: regulation of protein localization (GO:0032880);; Biological Process: cuticle development (GO:0042335);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: shoot system development (GO:0048367);; Biological Process: animal organ formation (GO:0048645);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (GO:0052033);; Biological Process: cell wall organization (GO:0071555);; ","--","--","[T]","Signal transduction mechanisms","Protein tyrosine kinase;; Protein kinase domain","Serine/threonine-protein kinase RIPK OS=Arabidopsis thaliana OX=3702 GN=RIPK PE=1 SV=1","T","Signal transduction mechanisms","PREDICTED: serine/threonine-protein kinase At5g01020 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: immune system process (GO:0002376);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra019049","Bra019049",0.024681,3,0.045328,4,0.014909,2,2.19679,122,12.681863,669,10.825377,580,{"v":1.40335748256695e-17,"d":"1.40E-17"},6.35751007982965,"up","[IQR]","Lipid transport and metabolism;; Secondary metabolites biosynthesis, transport and catabolism;; General function prediction only","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: response to ethylene (GO:0009723);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Molecular Function: protochlorophyllide reductase activity (GO:0016630);; Biological Process: starch biosynthetic process (GO:0019252);; Biological Process: cysteine biosynthetic process (GO:0019344);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: cell differentiation (GO:0030154);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: oxidation-reduction process (GO:0055114);; ","K00218|0|brp:103861694|K00218 protochlorophyllide reductase [EC:1.3.1.33] | (RefSeq) protochlorophyllide reductase B, chloroplastic-like","Porphyrin and chlorophyll metabolism (ko00860)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","short chain dehydrogenase;; Enoyl-(Acyl carrier protein) reductase;; KR domain","Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PORB PE=1 SV=3","S","Function unknown","PREDICTED: protochlorophyllide reductase B, chloroplastic-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra001709","Bra001709",5.882451,862,4.908937,682,5.604148,690,4.31409,431,2.485859,234,3.728308,363,0.000158344846524695,-1.14967131008475,"down","[L]","Replication, recombination and repair","Cellular Component: nuclear chromosome (GO:0000228);; Molecular Function: four-way junction DNA binding (GO:0000400);; Molecular Function: Y-form DNA binding (GO:0000403);; Molecular Function: heteroduplex DNA loop binding (GO:0000404);; Molecular Function: double-strand/single-strand DNA junction binding (GO:0000406);; Biological Process: meiotic mismatch repair (GO:0000710);; Biological Process: double-strand break repair via homologous recombination (GO:0000724);; Molecular Function: damaged DNA binding (GO:0003684);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete ATP catabolic process (GO:0006200);; Biological Process: DNA replication initiation (GO:0006270);; Biological Process: regulation of DNA replication (GO:0006275);; Biological Process: pyrimidine dimer repair (GO:0006290);; Biological Process: postreplication repair (GO:0006301);; Biological Process: DNA methylation (GO:0006306);; Biological Process: meiotic gene conversion (GO:0006311);; Biological Process: methylation-dependent chromatin silencing (GO:0006346);; Biological Process: chromosome segregation (GO:0007059);; Molecular Function: DNA-dependent ATPase activity (GO:0008094);; Biological Process: cell proliferation (GO:0008283);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: RNA interference (GO:0016246);; Biological Process: chromatin silencing by small RNA (GO:0031048);; Biological Process: heterochromatin assembly (GO:0031507);; Molecular Function: guanine/thymine mispair binding (GO:0032137);; Molecular Function: single base insertion or deletion binding (GO:0032138);; Cellular Component: MutSalpha complex (GO:0032301);; Cellular Component: MutSbeta complex (GO:0032302);; Biological Process: maintenance of DNA repeat elements (GO:0043570);; Biological Process: negative regulation of reciprocal meiotic recombination (GO:0045128);; Biological Process: positive regulation of cell cycle (GO:0045787);; Biological Process: petal formation (GO:0048451);; Biological Process: sepal formation (GO:0048453);; Biological Process: histone H3-K9 methylation (GO:0051567);; ","K08735|0|brp:103859754|K08735 DNA mismatch repair protein MSH2 | (RefSeq) DNA mismatch repair protein MSH2","Mismatch repair (ko03430)","[L]","Replication, recombination and repair","MutS domain V;; MutS domain III;; MutS family domain IV;; MutS domain II;; MutS domain I","DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV=1","L","Replication, recombination and repair","PREDICTED: DNA mismatch repair protein MSH2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: macromolecular complex (GO:0032991);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra009130","Bra009130",31.967428,4670,57.387579,8473,58.719925,7957,29.131895,3024,23.319104,2329,22.857225,2290,{"v":3.54103801889606e-05,"d":"3.54E-05"},-1.51886275183952,"down","[EH]","Amino acid transport and metabolism;; Coenzyme transport and metabolism","Biological Process: sulfate assimilation (GO:0000103);; Biological Process: tryptophan biosynthetic process (GO:0000162);; Biological Process: MAPK cascade (GO:0000165);; Molecular Function: anthranilate synthase activity (GO:0004049);; Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781);; Cellular Component: cytosol (GO:0005829);; Cellular Component: anthranilate synthase complex (GO:0005950);; Biological Process: threonine catabolic process (GO:0006567);; Biological Process: tryptophan catabolic process (GO:0006569);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to wounding (GO:0009611);; Biological Process: photomorphogenesis (GO:0009640);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to auxin (GO:0009733);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: auxin polar transport (GO:0009926);; Biological Process: cellular response to sulfate starvation (GO:0009970);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: lateral root formation (GO:0010311);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Cellular Component: membrane (GO:0016020);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: glucosinolate biosynthetic process (GO:0019761);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of multi-organism process (GO:0043900);; Biological Process: indeterminate inflorescence morphogenesis (GO:0048283);; Biological Process: defense response to fungus (GO:0050832);; ","K01657|0|brp:103846914|K01657 anthranilate synthase component I [EC:4.1.3.27] | (RefSeq) anthranilate synthase alpha subunit 1, chloroplastic","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","chorismate binding enzyme;; Anthranilate synthase component I, N terminal region","Anthranilate synthase alpha subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ASA1 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: anthranilate synthase alpha subunit 1, chloroplastic [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; cellular component: membrane (GO:0016020);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414)"]
["Bra026080","Bra026080",2.323658,133,0.532398,32,1.294244,68,5.06559,200,7.340576,288,5.844032,246,0.00505642276728877,1.56770359726651,"up","--","--","Biological Process: pentose-phosphate shunt (GO:0006098);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: carotenoid biosynthetic process (GO:0016117);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: apoplast (GO:0048046);; Molecular Function: coenzyme binding (GO:0050662);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103872408 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488)"]
["Bra017752","Bra017752",4.761538,491,19.34944,2005,17.140433,1633,1.169385,88,0.964524,93,0.976035,95,{"v":1.75062676428029e-11,"d":"1.75E-11"},-3.7796495875203,"down","[QV]","Secondary metabolites biosynthesis, transport and catabolism;; Defense mechanisms","Biological Process: very long-chain fatty acid metabolic process (GO:0000038);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: response to UV-B (GO:0010224);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: ferulate 5-hydroxylase activity (GO:0046424);; Biological Process: oxidation-reduction process (GO:0055114);; Molecular Function: fatty acid alpha-hydroxylase activity (GO:0080132);; ","K09755|0|brp:103862460|K09755 ferulate-5-hydroxylase [EC:1.14.-.-] | (RefSeq) cytochrome P450 84A1-like","Phenylpropanoid biosynthesis (ko00940)","[Q]","Secondary metabolites biosynthesis, transport and catabolism","Cytochrome P450","Cytochrome P450 84A1 OS=Arabidopsis thaliana OX=3702 GN=CYP84A1 PE=1 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: cytochrome P450 84A1-like [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; molecular function: electron carrier activity (GO:0009055);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: biological regulation (GO:0065007)"]
["Bra024389","Bra024389",1.209011,111,1.939281,194,2.400983,209,5.876749,429,7.910023,520,7.419301,453,0.00160710356230595,1.32073111306429,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: chlorophyll catabolic process (GO:0015996);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103873983 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)"]
["Bra017910","Bra017910",64.147827,6280,70.719677,7019,64.203156,5815,26.744426,1845,32.73512,2180,34.953388,2340,{"v":8.25548052839408e-16,"d":"8.26E-16"},-1.62859843968913,"down","--","--","Cellular Component: Golgi stack (GO:0005795);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: membrane fusion (GO:0006944);; Molecular Function: protein transporter activity (GO:0008565);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","[U]","Intracellular trafficking, secretion, and vesicular transport","VHS domain;; GAT domain","TOM1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOL3 PE=1 SV=1","S","Function unknown","PREDICTED: TOM1-like protein 2 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: transporter activity (GO:0005215);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)"]
["Bra002457","Bra002457",3.946046,721,5.661896,1054,6.344883,1085,4.091042,539,1.871665,230,1.559374,171,0.00234736308087487,-1.61564309055988,"down","[G]","Carbohydrate transport and metabolism","Biological Process: biosynthetic process (GO:0009058);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","--","--","--","--","Glycosyl transferase family 2","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103845483 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra007230","Bra007230",113.241271,6791,166.288497,10066,173.373814,9621,30.986918,1311,18.691818,759,18.047718,740,{"v":1.28993922824805e-19,"d":"1.29E-19"},-3.24244402661895,"down","[P]","Inorganic ion transport and metabolism","Biological Process: response to reactive oxygen species (GO:0000302);; Cellular Component: chromatin (GO:0000785);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: DNA-dependent DNA replication (GO:0006261);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: polyamine catabolic process (GO:0006598);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: high-affinity iron ion transmembrane transport (GO:0006827);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Biological Process: Golgi organization (GO:0007030);; Biological Process: aging (GO:0007568);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: chloroplast inner membrane (GO:0009706);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: positive regulation of flavonoid biosynthetic process (GO:0009963);; Biological Process: leaf morphogenesis (GO:0009965);; Cellular Component: magnesium chelatase complex (GO:0010007);; Biological Process: specification of floral organ identity (GO:0010093);; Biological Process: heat acclimation (GO:0010286);; Molecular Function: phosphatidylinositol-5-phosphate binding (GO:0010314);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Molecular Function: copper chaperone activity (GO:0016531);; Molecular Function: superoxide dismutase copper chaperone activity (GO:0016532);; Biological Process: histone phosphorylation (GO:0016572);; Molecular Function: magnesium chelatase activity (GO:0016851);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: cellular modified amino acid biosynthetic process (GO:0042398);; Molecular Function: transcription regulatory region DNA binding (GO:0044212);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Biological Process: histone H3-K9 methylation (GO:0051567);; Biological Process: histone H3-K4 methylation (GO:0051568);; ","K07213|1.66693e-68|brp:103841533|K07213 copper chaperone | (RefSeq) copper transport protein CCH","--","[P]","Inorganic ion transport and metabolism","Heavy-metal-associated domain","Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1","S","Function unknown","PREDICTED: copper transport protein CCH [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: developmental process (GO:0032502);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; molecular function: metallochaperone activity (GO:0016530);; molecular function: enzyme regulator activity (GO:0030234);; molecular function: catalytic activity (GO:0003824);; cellular component: extracellular region (GO:0005576)"]
["Bra023505","Bra023505",15.135495,1617,47.488301,5115,60.06849,5859,5.779387,451,2.403261,184,3.56992,282,{"v":3.1324652122353e-10,"d":"3.13E-10"},-3.65992510857803,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Biological Process: respiratory burst involved in defense response (GO:0002679);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cation transport (GO:0006812);; Biological Process: amino acid transport (GO:0006865);; Biological Process: membrane fusion (GO:0006944);; Biological Process: defense response (GO:0006952);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to absence of light (GO:0009646);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: salicylic acid biosynthetic process (GO:0009697);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to chitin (GO:0010200);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: system development (GO:0048731);; Biological Process: regulation of defense response to virus by host (GO:0050691);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 72 OS=Arabidopsis thaliana OX=3702 GN=WRKY72 PE=2 SV=1","K","Transcription","PREDICTED: probable WRKY transcription factor 72 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: immune system process (GO:0002376);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: multi-organism process (GO:0051704)"]
["Bra034488","Bra034488",13.317914,835,12.508909,792,10.695745,621,36.554569,1621,37.654716,1607,33.950481,1458,{"v":5.66439938698872e-11,"d":"5.66E-11"},1.01177718147807,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasmic part (GO:0044444);; ","--","--","--","--","Protein of unknown function, DUF573","Probable transcription factor At1g61730 OS=Arabidopsis thaliana OX=3702 GN=At1g61730 PE=1 SV=1","K","Transcription","PREDICTED: probable transcription factor At1g61730 isoform X1 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra000547","Bra000547",1.195556,128,0.691781,82,0.571959,58,2.985502,240,8.704099,628,7.987485,616,{"v":2.81141678903366e-06,"d":"2.81E-06"},2.35246579209974,"up","[PR]","Inorganic ion transport and metabolism;; General function prediction only","Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: sulfur compound metabolic process (GO:0006790);; Biological Process: response to stress (GO:0006950);; Cellular Component: thylakoid (GO:0009579);; Cellular Component: chloroplast inner membrane (GO:0009706);; Biological Process: post-embryonic development (GO:0009791);; Molecular Function: chlorophyllide a oxygenase [overall] activity (GO:0010277);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: vanillate monooxygenase activity (GO:0018489);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: heterocycle metabolic process (GO:0046483);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: shoot system development (GO:0048367);; Biological Process: reproductive structure development (GO:0048608);; Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance catabolic process (GO:1901575);; ","--","--","--","--","Rieske [2Fe-2S] domain;; Pheophorbide a oxygenase","Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1","P","Inorganic ion transport and metabolism","PREDICTED: protein TIC 55, chloroplastic [Brassica rapa] ","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; biological process: reproductive process (GO:0022414)"]
["Bra013486","Bra013486",1.001642,43,0.331603,18,0.623768,35,2.446428,87,6.482838,198,6.29445,209,0.00014433555515723,2.19603673751573,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: defense response to fungus (GO:0050832);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1","S","Function unknown","PREDICTED: transcription factor bHLH36-like [Brassica rapa] ","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)"]
["Bra016236","Bra016236",1.671274,195,2.642954,298,2.324076,235,7.97861,636,7.661003,548,8.900776,679,{"v":6.43467036787293e-05,"d":"6.43E-05"},1.26474165675945,"up","--","--","--","--","--","--","--","--","Protein WVD2-like 7 OS=Arabidopsis thaliana OX=3702 GN=WDL7 PE=2 SV=1","S","Function unknown","PREDICTED: protein WVD2-like 7 [Brassica rapa] ","--"]
["Bra037467","Bra037467",4.785972,319,3.521654,228,4.026533,249,13.214499,596,13.849077,622,12.639848,564,{"v":6.3509064359633e-09,"d":"6.35E-09"},1.11359142166274,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","--","--","[A]","RNA processing and modification","SAM domain (Sterile alpha motif);; SAM domain (Sterile alpha motif)","--","S","Function unknown","PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)"]
["Bra011396","Bra011396",1.868631,602,2.721633,774,2.74172,681,2.187513,375,1.207601,215,1.821219,291,0.000147857428085846,-1.26899618624338,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: vacuole (GO:0005773);; Biological Process: protein glycosylation (GO:0006486);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103850279 [Brassica rapa] ","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054)"]
["Bra002003","Bra002003",13.410589,1777,19.857509,2716,29.5544,3422,10.522866,948,14.195196,1164,13.596196,1180,0.00066925448988604,-1.32284458481942,"down","--","--","Biological Process: respiratory burst involved in defense response (GO:0002679);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to chitin (GO:0010200);; Biological Process: amino acid import (GO:0043090);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","--","Arabidopsis phospholipase-like protein (PEARLI 4)","--","--","--","BnaA07g03350D [Brassica napus]","biological process: immune system process (GO:0002376);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179)"]
["Bra000133","Bra000133",1.736557,101,6.040081,352,5.692815,304,0,0,0,0,0.117051,5,{"v":8.35794269640274e-11,"d":"8.36E-11"},-5.90621841976218,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: defense response (GO:0006952);; Biological Process: lignan biosynthetic process (GO:0009807);; Biological Process: suberin biosynthetic process (GO:0010345);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; Biological Process: root hair cell differentiation (GO:0048765);; ","--","--","--","--","Dirigent-like protein","Dirigent protein 9 OS=Arabidopsis thaliana OX=3702 GN=DIR9 PE=2 SV=1","S","Function unknown","PREDICTED: dirigent protein 9-like [Brassica rapa]","cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra039760","Bra039760",1.86019,293,2.051288,344,2.30214,382,7.438728,724,9.917932,980,7.279019,787,{"v":8.2914830642774e-05,"d":"8.29E-05"},1.20097564926768,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Biological Process: leaf senescence (GO:0010150);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: myo-inositol hexakisphosphate biosynthetic process (GO:0010264);; Biological Process: cellular response to oxidative stress (GO:0034599);; Biological Process: reactive oxygen species metabolic process (GO:0072593);; ","--","--","--","--","--","Senescence-associated protein AAF, chlorolplastic OS=Arabidopsis thaliana OX=3702 GN=AAF PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103852322 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: reproductive process (GO:0022414);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)"]
["Bra010574","Bra010574",14.930177,1862,14.526441,1831,16.102717,1859,43.4934,3835,59.646105,5070,55.275899,4727,{"v":6.08989477424774e-09,"d":"6.09E-09"},1.23062587234778,"up","[E]","Amino acid transport and metabolism","Molecular Function: aminopeptidase activity (GO:0004177);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: lipid transport (GO:0006869);; Biological Process: intra-Golgi vesicle-mediated transport (GO:0006891);; Biological Process: auxin polar transport (GO:0009926);; Molecular Function: N-1-naphthylphthalamic acid binding (GO:0010013);; Biological Process: lithium ion transport (GO:0010351);; Biological Process: protein import into peroxisome matrix (GO:0016558);; Molecular Function: metal ion binding (GO:0046872);; ","K01262|0|brp:103835003|K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] | (RefSeq) probable Xaa-Pro aminopeptidase P","--","[E]","Amino acid transport and metabolism","Creatinase/Prolidase N-terminal domain;; Metallopeptidase family M24;; C-terminal region of peptidase_M24;; Creatinase/Prolidase N-terminal domain","--","E","Amino acid transport and metabolism","PREDICTED: probable Xaa-Pro aminopeptidase P [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840)"]
["Bra031423","Bra031423",12.354083,1367,9.523115,942,8.814591,803,9.526625,689,4.256121,343,5.070101,450,0.00201308692536678,-1.0804486433393,"down","[J]","Translation, ribosomal structure and biogenesis","Biological Process: RNA methylation (GO:0001510);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: vacuole (GO:0005773);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: plant-type cell wall cellulose metabolic process (GO:0052541);; Biological Process: cell wall pectin metabolic process (GO:0052546);; ","K02925|0|brp:103830735|K02925 large subunit ribosomal protein L3e | (RefSeq) 60S ribosomal protein L3-2","Ribosome (ko03010)","[J]","Translation, ribosomal structure and biogenesis","Ribosomal protein L3","60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4","J","Translation, ribosomal structure and biogenesis","PREDICTED: 60S ribosomal protein L3-2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: macromolecular complex (GO:0032991)"]
["Bra006593","Bra006593",191.082697,15809,227.916849,20630,251.160244,20673,122.275468,7688,107.195884,6849,100.409785,6409,{"v":5.27876896465561e-09,"d":"5.28E-09"},-1.50444161108449,"down","[K]","Transcription","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: regulation of cell growth (GO:0001558);; Molecular Function: peptide receptor activity (GO:0001653);; Molecular Function: guanylate cyclase activity (GO:0004383);; Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: microtubule nucleation (GO:0007020);; Biological Process: Golgi organization (GO:0007030);; Biological Process: signal transduction (GO:0007165);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: embryo sac development (GO:0009553);; Biological Process: microsporogenesis (GO:0009556);; Biological Process: response to wounding (GO:0009611);; Biological Process: virus induced gene silencing (GO:0009616);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: response to salt stress (GO:0009651);; Biological Process: plant-type cell wall organization (GO:0009664);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: embryo development (GO:0009790);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cell tip growth (GO:0009932);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: meristem initiation (GO:0010014);; Biological Process: positive regulation of seed germination (GO:0010030);; Biological Process: xylem and phloem pattern formation (GO:0010051);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: stomatal complex morphogenesis (GO:0010103);; Biological Process: transpiration (GO:0010148);; Biological Process: leaf senescence (GO:0010150);; Biological Process: pollen maturation (GO:0010152);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: regulation of hormone levels (GO:0010817);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Biological Process: regulation of cell adhesion (GO:0030155);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: response to endoplasmic reticulum stress (GO:0034976);; Biological Process: production of miRNAs involved in gene silencing by miRNA (GO:0035196);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: anthocyanin accumulation in tissues in response to UV light (GO:0043481);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: single-organism metabolic process (GO:0044710);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: inflorescence morphogenesis (GO:0048281);; Biological Process: flower morphogenesis (GO:0048439);; Biological Process: plant ovule development (GO:0048481);; Biological Process: anther development (GO:0048653);; Biological Process: root hair elongation (GO:0048767);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of organ morphogenesis (GO:2000027);; Biological Process: regulation of seed maturation (GO:2000034);; ","--","--","[R]","General function prediction only","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1","S","Function unknown","leucine-rich repeat protein 1 [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; molecular function: receptor activity (GO:0004872);; molecular function: molecular transducer activity (GO:0060089);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: growth (GO:0040007);; molecular function: binding (GO:0005488)"]
["Bra011437","Bra011437",2.194391,215,1.034617,103,1.313268,118,4.720576,325,4.754486,315,3.995949,265,0.00398150202234138,1.01321413218921,"up","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: proteolysis (GO:0006508);; Cellular Component: endosome membrane (GO:0010008);; Cellular Component: integral component of membrane (GO:0016021);; ","K09598|0|brp:103847516|K09598 signal peptide peptidase-like 3 [EC:3.4.23.-] | (RefSeq) signal peptide peptidase-like 1","--","[S]","Function unknown","Signal peptide peptidase","Signal peptide peptidase-like 1 OS=Arabidopsis thaliana OX=3702 GN=SPPL1 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PREDICTED: signal peptide peptidase-like 1 [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)"]
["Bra035746","Bra035746",42.041412,4005,37.293858,3585,33.487537,2951,0,0,0,0,0,0,{"v":1.11942197799054e-55,"d":"1.12E-55"},-11.6283347364173,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Biological Process: response to superoxide (GO:0000303);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: protein N-linked glycosylation (GO:0006487);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cell death (GO:0008219);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: response to salt stress (GO:0009651);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: salicylic acid mediated signaling pathway (GO:0009863);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: endoplasmic reticulum unfolded protein response (GO:0030968);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: hyperosmotic salinity response (GO:0042538);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: regulation of sulfur metabolic process (GO:0042762);; Biological Process: negative regulation of programmed cell death (GO:0043069);; Biological Process: post-translational protein modification (GO:0043687);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: cotyledon development (GO:0048825);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: response to karrikin (GO:0080167);; ","K14514|4.36732e-180|brp:103869281|K14514 ethylene-insensitive protein 3 | (RefSeq) protein ETHYLENE INSENSITIVE 3","Plant hormone signal transduction (ko04075)","--","--","Ethylene insensitive 3","Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana OX=3702 GN=EIN3 PE=1 SV=1","--","--","BnaA05g20140D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra022861","Bra022861",5.673191,242,9.851391,423,9.551386,376,1.580059,48,1.511464,44,1.184988,35,{"v":6.29434135506859e-13,"d":"6.29E-13"},-3.0194623084108,"down","[R]","General function prediction only","Biological Process: cytokinesis (GO:0000910);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi stack (GO:0005795);; Cellular Component: Golgi-associated vesicle (GO:0005798);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: obsolete GTP catabolic process (GO:0006184);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: nucleocytoplasmic transport (GO:0006913);; Biological Process: small GTPase mediated signal transduction (GO:0007264);; Biological Process: response to heat (GO:0009408);; Cellular Component: cell plate (GO:0009504);; Biological Process: response to auxin (GO:0009733);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: polarity specification of adaxial/abaxial axis (GO:0009944);; Biological Process: meristem initiation (GO:0010014);; Biological Process: regulation of meristem growth (GO:0010075);; Molecular Function: kinase binding (GO:0019900);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Biological Process: hyperosmotic salinity response (GO:0042538);; Cellular Component: apical part of cell (GO:0045177);; Biological Process: inter-Golgi cisterna vesicle-mediated transport (GO:0048219);; Biological Process: photoperiodism, flowering (GO:0048573);; Cellular Component: exocytic vesicle (GO:0070382);; Biological Process: regulation of pollen tube growth (GO:0080092);; Cellular Component: pollen tube tip (GO:0090404);; ","K07904|8.12876e-151|brp:103857394|K07904 Ras-related protein Rab-11A | (RefSeq) ras-related protein RABA5d-like","Endocytosis (ko04144)","[U]","Intracellular trafficking, secretion, and vesicular transport","Ras family;; Ras of Complex, Roc, domain of DAPkinase;; ADP-ribosylation factor family;; 50S ribosome-binding GTPase","Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1","S","Function unknown","PREDICTED: ras-related protein RABA5d-like [Brassica rapa]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: localization (GO:0051179);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra005241","Bra005241",1.672831,162,4.299216,419,4.304728,384,16.574915,1131,23.546825,1547,26.081564,1724,{"v":3.68834356978223e-05,"d":"3.69E-05"},2.00845781293495,"up","[G]","Carbohydrate transport and metabolism","Cellular Component: chloroplast (GO:0009507);; Biological Process: response to UV-B (GO:0010224);; Biological Process: brassinosteroid metabolic process (GO:0016131);; Molecular Function: trans-zeatin O-beta-D-glucosyltransferase activity (GO:0050403);; Molecular Function: cis-zeatin O-beta-D-glucosyltransferase activity (GO:0050502);; Biological Process: flavonol biosynthetic process (GO:0051555);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; Molecular Function: quercetin 4'-O-glucosyltransferase activity (GO:0080046);; ","K13496|0|brp:103867257|K13496 UDP-glucosyl transferase 73C [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 73C5-like","--","[GC]","Carbohydrate transport and metabolism;; Energy production and conversion","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 73C5 OS=Arabidopsis thaliana OX=3702 GN=UGT73C5 PE=2 SV=1","S","Function unknown","PREDICTED: UDP-glycosyltransferase 73C5-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)"]
["Bra007603","Bra007603",44.43198,2474,133.479568,7501,137.529907,7084,15.25149,601,13.485414,512,9.37765,358,{"v":8.44209385742447e-12,"d":"8.44E-12"},-3.47421760767083,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: protein binding (GO:0005515);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Biological Process: acetyl-CoA metabolic process (GO:0006084);; Biological Process: glycolytic process (GO:0006096);; Biological Process: calcium ion transport (GO:0006816);; Biological Process: iron ion transport (GO:0006826);; Biological Process: water transport (GO:0006833);; Biological Process: hyperosmotic response (GO:0006972);; Biological Process: Golgi organization (GO:0007030);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to water deprivation (GO:0009414);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to fructose (GO:0009750);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular response to iron ion starvation (GO:0010106);; Molecular Function: water channel activity (GO:0015250);; Biological Process: carbon dioxide transport (GO:0015670);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Biological Process: brassinosteroid biosynthetic process (GO:0016132);; Biological Process: regulation of protein localization (GO:0032880);; Cellular Component: anchored component of plasma membrane (GO:0046658);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: transmembrane transport (GO:0055085);; ","K09872|0|brp:103841965|K09872 aquaporin PIP | (RefSeq) aquaporin PIP1-1","--","[G]","Carbohydrate transport and metabolism","Major intrinsic protein","Aquaporin PIP1.1 OS=Vicia faba OX=3906 GN=PIP1.1 PE=2 SV=1","G","Carbohydrate transport and metabolism","PREDICTED: aquaporin PIP1-1 isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; cellular component: organelle part (GO:0044422);; molecular function: transporter activity (GO:0005215);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)"]
["Bra024170","Bra024170",4.907571,976,8.011912,1575,9.34103,1727,4.193003,597,0.943269,147,2.065225,280,0.000393585673867243,-2.03890409281796,"down","[I]","Lipid transport and metabolism","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity (GO:0003857);; Molecular Function: dodecenoyl-CoA delta-isomerase activity (GO:0004165);; Molecular Function: enoyl-CoA hydratase activity (GO:0004300);; Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cytosol (GO:0005829);; Cellular Component: cytoskeleton (GO:0005856);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: peroxisome organization (GO:0007031);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: 3-hydroxybutyryl-CoA epimerase activity (GO:0008692);; Biological Process: toxin catabolic process (GO:0009407);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: glyoxysome (GO:0009514);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: seed germination (GO:0009845);; Biological Process: flower development (GO:0009908);; Molecular Function: long-chain-enoyl-CoA hydratase activity (GO:0016508);; Molecular Function: 3-hydroxyacyl-CoA dehydratase activity (GO:0018812);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: response to misfolded protein (GO:0051788);; Biological Process: proteasome core complex assembly (GO:0080129);; ","K10527|0|bna:106389792|K10527 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211] | (RefSeq) peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like","Fatty acid degradation (ko00071);; alpha-Linolenic acid metabolism (ko00592);; Fatty acid metabolism (ko01212)","[I]","Lipid transport and metabolism","3-hydroxyacyl-CoA dehydrogenase, NAD binding domain;; Enoyl-CoA hydratase/isomerase;; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;; Enoyl-CoA hydratase/isomerase","Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 OS=Arabidopsis thaliana OX=3702 GN=AIM1 PE=1 SV=1","I","Lipid transport and metabolism","PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like isoform X1 [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: response to stimulus (GO:0050896)"]
["Bra003130","Bra003130",1.319386,173,1.917309,259,1.136144,222,0.718571,93,0.750388,117,0.588778,92,0.00243517709698404,-1.15765547100346,"down","--","--","Biological Process: regionalization (GO:0003002);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: floral whorl development (GO:0048438);; Biological Process: petal development (GO:0048441);; Biological Process: floral organ formation (GO:0048449);; Biological Process: phyllome development (GO:0048827);; ","--","--","--","--","B3 DNA binding domain","B3 domain-containing protein REM20 OS=Arabidopsis thaliana OX=3702 GN=REM20 PE=1 SV=1","K","Transcription","PREDICTED: B3 domain-containing protein REM20-like [Brassica rapa]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproductive process (GO:0022414)"]
["Bra021410","Bra021410",84.654831,4149,149.764284,6862,121.162142,5208,72.715981,2618,95.941534,2972,78.038808,2530,0.000744334424851493,-1.05332706451234,"down","--","--","Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: protein tyrosine phosphatase activity (GO:0004725);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: response to ethylene (GO:0009723);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: response to chitin (GO:0010200);; Biological Process: peptidyl-tyrosine dephosphorylation (GO:0035335);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: negative regulation of MAP kinase activity (GO:0043407);; ","K18045|1.13048e-127|brp:103843604|K18045 tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] | (RefSeq) probable tyrosine-protein phosphatase At1g05000","--","[V]","Defense mechanisms","Tyrosine phosphatase family;; Tyrosine phosphatase family","Tyrosine-protein phosphatase DSP3 OS=Arabidopsis thaliana OX=3702 GN=DSP3 PE=1 SV=1","T","Signal transduction mechanisms","BnaCnng56880D [Brassica napus]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)"]
["Bra007688","Bra007688",0.290827,26,0.670603,52,0.663609,50,2.006818,111,4.053769,203,4.129536,214,0.000753804641667345,1.86054896154176,"up","--","--","--","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103842068 isoform X1 [Brassica rapa]","--"]
["Bra005984","Bra005984",18.101599,826,8.089781,373,5.242186,222,1.809964,59,0.716402,23,2.20602,69,{"v":2.94261134540253e-07,"d":"2.94E-07"},-3.01943924077177,"down","--","--","Biological Process: MAPK cascade (GO:0000165);; Molecular Function: core promoter proximal region sequence-specific DNA binding (GO:0000987);; Molecular Function: core promoter binding (GO:0001047);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein binding (GO:0005515);; Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to membrane (GO:0006612);; Biological Process: cell proliferation (GO:0008283);; Biological Process: regulation of cell size (GO:0008361);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway (GO:0009862);; Biological Process: jasmonic acid mediated signaling pathway (GO:0009867);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: inflorescence development (GO:0010229);; Biological Process: regulation of hydrogen peroxide metabolic process (GO:0010310);; Biological Process: regulation of plant-type hypersensitive response (GO:0010363);; Biological Process: cell differentiation (GO:0030154);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: DNA endoreduplication (GO:0042023);; Biological Process: regulation of circadian rhythm (GO:0042752);; Biological Process: negative regulation of sequence-specific DNA binding transcription factor activity (GO:0043433);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: root development (GO:0048364);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: negative regulation of leaf senescence (GO:1900056);; ","K16221|1.25525e-94|brp:103855775|K16221 transcription factor TCP21 (protein CCA1 HIKING EXPEDITION) | (RefSeq) transcription factor TCP21","Circadian rhythm - plant (ko04712)","--","--","TCP family transcription factor","Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1","S","Function unknown","PREDICTED: transcription factor TCP21 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: reproductive process (GO:0022414)"]
["Bra028972","Bra028972",38.15144,2433,60.324973,3914,50.816826,3025,28.052046,1268,19.342151,832,17.521594,768,{"v":5.8464171087315e-07,"d":"5.85E-07"},-1.74713393199327,"down","[T]","Signal transduction mechanisms","Biological Process: activation of MAPKK activity (GO:0000186);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: animal organ senescence (GO:0010260);; Biological Process: cellular response to phosphate starvation (GO:0016036);; Biological Process: protein desumoylation (GO:0016926);; Biological Process: galactolipid biosynthetic process (GO:0019375);; Biological Process: cellular response to water deprivation (GO:0042631);; Biological Process: amino acid import (GO:0043090);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; ","K08867|0|brp:103856980|K08867 WNK lysine deficient protein kinase [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase WNK11","--","[R]","General function prediction only","Protein kinase domain;; Protein tyrosine kinase","Probable serine/threonine-protein kinase WNK11 OS=Arabidopsis thaliana OX=3702 GN=WNK11 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable serine/threonine-protein kinase WNK11 [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: molecular transducer activity (GO:0060089);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: rhythmic process (GO:0048511);; biological process: developmental process (GO:0032502)"]
["Bra017056","Bra017056",10.259972,176,10.993659,190,10.49948,166,28.012585,339,34.345463,400,36.976303,433,{"v":2.42690948447267e-05,"d":"2.43E-05"},1.07454964653588,"up","--","--","--","K18167|3.16777e-57|brp:103865739|K18167 succinate dehydrogenase assembly factor 1 | (RefSeq) succinate dehydrogenase assembly factor 1, mitochondrial","--","[S]","Function unknown","Complex 1 protein (LYR family);; Complex1_LYR-like","--","S","Function unknown","PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Brassica rapa] ","--"]
["Bra024890","Bra024890",22.774599,2342,37.9315,3970,33.420478,3219,23.038357,1705,16.266784,1154,15.88982,1115,0.000256448478777724,-1.31382406448271,"down","--","--","Molecular Function: mannose-6-phosphate isomerase activity (GO:0004476);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to absence of light (GO:0009646);; Biological Process: response to sucrose (GO:0009744);; Biological Process: chloroplast avoidance movement (GO:0009903);; Biological Process: chloroplast accumulation movement (GO:0009904);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: L-ascorbic acid biosynthetic process (GO:0019853);; Biological Process: response to L-ascorbic acid (GO:0033591);; Biological Process: response to DDT (GO:0046680);; Biological Process: response to cadmium ion (GO:0046686);; ","--","--","--","--","Domain of unknown function (DUF4228)","Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein At1g66480-like [Brassica rapa] ","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699)"]
["Bra003300","Bra003300",0.201938,12,0.40606,28,0.448494,23,1.28642,60,1.368116,66,1.905662,92,0.00858496833884692,1.60394064144009,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: heme biosynthetic process (GO:0006783);; Biological Process: fatty acid catabolic process (GO:0009062);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: negative gravitropism (GO:0009959);; Biological Process: negative regulation of photomorphogenesis (GO:0010100);; Biological Process: red light signaling pathway (GO:0010161);; Biological Process: seed dormancy process (GO:0010162);; Biological Process: negative regulation of seed germination (GO:0010187);; Molecular Function: phytochrome binding (GO:0010313);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: stamen development (GO:0048443);; Biological Process: petal morphogenesis (GO:0048446);; Biological Process: plant ovule development (GO:0048481);; Biological Process: root hair cell development (GO:0080147);; Biological Process: positive regulation of brassinosteroid biosynthetic process (GO:2000488);; ","--","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH60 OS=Arabidopsis thaliana OX=3702 GN=BHLH60 PE=1 SV=1","K","Transcription","PREDICTED: transcription factor bHLH60-like [Brassica rapa]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: reproduction (GO:0000003);; biological process: multicellular organismal process (GO:0032501)"]
["Bra010127","Bra010127",23.177769,702,38.806866,1186,27.470152,770,9.18891,197,6.268492,130,4.531042,94,{"v":1.65411703144171e-10,"d":"1.65E-10"},-2.64721397524937,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103874722 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra025924","Bra025924",347.027039,11311,343.54364,11300,259.865326,7836,197.261108,4549,162.724823,3612,144.917435,3237,{"v":4.05314841259041e-11,"d":"4.05E-11"},-1.44856359125182,"down","[T]","Signal transduction mechanisms","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to cold (GO:0009409);; Biological Process: double fertilization forming a zygote and endosperm (GO:0009567);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: cellular component organization (GO:0016043);; Biological Process: obsolete cellular process involved in reproduction (GO:0048610);; Biological Process: root hair elongation (GO:0048767);; Biological Process: pollen tube development (GO:0048868);; Biological Process: regulation of nitric oxide metabolic process (GO:0080164);; ","K13448|8.92613e-106|brp:103872587|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML27","Plant-pathogen interaction (ko04626)","[T]","Signal transduction mechanisms","EF hand;; EF-hand domain pair;; EF-hand domain;; EF hand;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region;; Cytoskeletal-regulatory complex EF hand","Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1","DTZ","Cell cycle control, cell division, chromosome partitioning;; Signal transduction mechanisms;; Cytoskeleton","PREDICTED: probable calcium-binding protein CML27 [Brassica rapa]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007)"]
["Bra000830","Bra000830",0,0,0,0,0,0,1.756927,41,2.007954,45,3.159366,71,{"v":6.86715425182981e-09,"d":"6.87E-09"},5.90723844487656,"up","--","--","--","--","--","--","--","XH domain","--","--","--","PREDICTED: uncharacterized protein LOC103858703 [Brassica rapa]","--"]
["Bra000555","Bra000555",1.526469,284,1.071353,201,1.765988,304,1.255683,165,0.668888,85,0.762056,97,0.00475532102474229,-1.21194680172587,"down","[K]","Transcription","Biological Process: polysaccharide catabolic process (GO:0000272);; Biological Process: regionalization (GO:0003002);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: starch metabolic process (GO:0005982);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: response to stress (GO:0006950);; Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to brassinosteroid (GO:0009741);; Biological Process: post-embryonic animal morphogenesis (GO:0009886);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: regulation of meristem growth (GO:0010075);; Biological Process: seed maturation (GO:0010431);; Biological Process: regulation of gene expression (GO:0010468);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: cell differentiation (GO:0030154);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: single-organism carbohydrate metabolic process (GO:0044723);; Biological Process: single-organism transport (GO:0044765);; Biological Process: embryonic meristem development (GO:0048508);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: anther development (GO:0048653);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: regulation of reproductive process (GO:2000241);; ","--","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Protein kinase domain;; Leucine Rich Repeat;; Protein tyrosine kinase;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana OX=3702 GN=At2g25790 PE=2 SV=1","S","Function unknown","PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 [Brassica rapa]","biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: growth (GO:0040007);; biological process: localization (GO:0051179)"]
["Bra021861","Bra021861",6.109102,632,7.005527,732,6.474672,620,6.115998,448,3.877976,274,3.679785,261,0.00133900686283529,-1.05718240604278,"down","--","--","Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: signal transduction (GO:0007165);; Molecular Function: chitin binding (GO:0008061);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: kinase activity (GO:0016301);; Biological Process: cell wall macromolecule catabolic process (GO:0016998);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: single-organism developmental process (GO:0044767);; Biological Process: innate immune response (GO:0045087);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular response to molecule of bacterial origin (GO:0071219);; Biological Process: cellular response to chitin (GO:0071323);; ","--","--","--","--","LysM domain","Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: protein LYK5 [Brassica rapa]","biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704)"]
["Bra029583","Bra029583",61.311121,9970,73.875805,12521,74.09218,11726,23.771493,2789,20.442957,2235,17.689238,1928,{"v":1.12437154446725e-19,"d":"1.12E-19"},-2.34168815614472,"down","[G]","Carbohydrate transport and metabolism","Molecular Function: sucrose alpha-glucosidase activity (GO:0004575);; Molecular Function: protein binding (GO:0005515);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: sucrose catabolic process (GO:0005987);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: response to wounding (GO:0009611);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: coumarin biosynthetic process (GO:0009805);; Biological Process: regulation of seed germination (GO:0010029);; Biological Process: regulation of meristem growth (GO:0010075);; Molecular Function: glycopeptide alpha-N-acetylgalactosaminidase activity (GO:0033926);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: root development (GO:0048364);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; ","--","--","--","--","Alkaline and neutral invertase;; Amylo-alpha-1,6-glucosidase","Alkaline/neutral invertase C, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=INVC PE=1 SV=1","S","Function unknown","PREDICTED: alkaline/neutral invertase C, mitochondrial [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: rhythmic process (GO:0048511);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)"]
["Bra000861","Bra000861",2.022763,69,5.417479,186,6.056474,191,0.049507,2,0.410436,11,0.068981,2,{"v":9.99893558917191e-08,"d":"1.00E-07"},-4.3284603716653,"down","--","--","Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","--","S","Function unknown","PREDICTED: uncharacterized protein LOC103858737 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra008089","Bra008089",30.455025,1212,43.5546,1749,35.153934,1294,0.920949,26,0.202067,6,0,0,{"v":9.59215131046963e-14,"d":"9.59E-14"},-6.11872180523847,"down","--","--","Molecular Function: endopeptidase inhibitor activity (GO:0004866);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to nitrate (GO:0010167);; Biological Process: programmed cell death (GO:0012501);; Biological Process: nitrate transport (GO:0015706);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: defense response to bacterium (GO:0042742);; ","--","--","--","--","Trypsin and protease inhibitor","Kunitz trypsin inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=KTI1 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: alpha-amylase/subtilisin inhibitor-like [Brassica rapa]","biological process: biological regulation (GO:0065007);; molecular function: enzyme regulator activity (GO:0030234);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: multi-organism process (GO:0051704)"]
["Bra025921","Bra025921",0.038019,2,0.190023,10,0.033298,2,2.512461,87,1.894644,63,1.516447,51,{"v":3.06864435125163e-05,"d":"3.07E-05"},3.31576414904004,"up","--","--","Cellular Component: membrane (GO:0016020);; ","--","--","[MOT]","Cell wall/membrane/envelope biogenesis;; Posttranslational modification, protein turnover, chaperones;; Signal transduction mechanisms","Zein-binding","Protein FLOURY 1-like OS=Arabidopsis thaliana OX=3702 GN=At1g18265 PE=2 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC103872589 [Brassica rapa]","cellular component: membrane (GO:0016020)"]
["Bra006245","Bra006245",3.992109,214,1.63219,90,1.508433,81,9.32348,358,5.912353,235,8.428686,330,0.00777329145502574,1.21857410933746,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; ","--","--","[T]","Signal transduction mechanisms","Phosducin","--","S","Function unknown","PREDICTED: phosducin-like protein 3 [Brassica rapa]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)"]
["Bra002752","Bra002752",0.123343,17,0.062007,9,0.05,7,0.636028,59,0.91702,83,1.431243,119,{"v":2.76530796440592e-06,"d":"2.77E-06"},2.78279476643519,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: protein targeting to chloroplast (GO:0045036);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","--","--","[K]","Transcription","CCT motif","Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1","K","Transcription","protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X2 [Brassica napus]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007)"]
["Bra034432","Bra034432",59.517462,7436,63.140577,8061,61.836443,7226,25.048325,2201,22.190252,1901,25.26369,2154,{"v":2.39756910451395e-29,"d":"2.40E-29"},-1.90923668173088,"down","[T]","Signal transduction mechanisms","Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Cellular Component: nucleus (GO:0005634);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein dephosphorylation (GO:0006470);; Biological Process: membrane fusion (GO:0006944);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: plastid (GO:0009536);; Biological Process: systemic acquired resistance (GO:0009627);; Biological Process: ethylene biosynthetic process (GO:0009693);; Biological Process: plant-type cell wall modification (GO:0009827);; Biological Process: pollen tube growth (GO:0009860);; Biological Process: red light signaling pathway (GO:0010161);; Cellular Component: cytoplasmic vesicle (GO:0016023);; Biological Process: regulation of defense response (GO:0031347);; Biological Process: negative regulation of defense response (GO:0031348);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: interspecies interaction between organisms (GO:0044419);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: apoplast (GO:0048046);; Biological Process: root hair elongation (GO:0048767);; ","--","--","[T]","Signal transduction mechanisms","Protein phosphatase 2C","Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana OX=3702 GN=At1g34750 PE=2 SV=1","T","Signal transduction mechanisms","PREDICTED: probable protein phosphatase 2C 10 [Brassica rapa] ","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: cell junction (GO:0030054);; biological process: immune system process (GO:0002376);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: growth (GO:0040007);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576)"]
["Bra035672","Bra035672",14.49521,1043,8.063215,810,8.925067,823,8.749315,435,3.027352,148,4.802236,229,0.000106384061038496,-1.71334252272426,"down","[M]","Cell wall/membrane/envelope biogenesis","Cellular Component: Golgi membrane (GO:0000139);; Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: endosome (GO:0005768);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: trans-Golgi network (GO:0005802);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: signal transduction (GO:0007165);; Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460);; Biological Process: nucleotide-sugar metabolic process (GO:0009225);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to glucose (GO:0009749);; Biological Process: response to fructose (GO:0009750);; Molecular Function: racemase and epimerase activity, acting on carbohydrates and derivatives (GO:0016857);; Biological Process: dTDP-rhamnose biosynthetic process (GO:0019305);; Biological Process: D-xylose metabolic process (GO:0042732);; Molecular Function: UDP-glucuronate decarboxylase activity (GO:0048040);; Molecular Function: coenzyme binding (GO:0050662);; ","K08678|0|brp:103864918|K08678 UDP-glucuronate decarboxylase [EC:4.1.1.35] | (RefSeq) UDP-glucuronic acid decarboxylase 6","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)","[GM]","Carbohydrate transport and metabolism;; Cell wall/membrane/envelope biogenesis","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; Polysaccharide biosynthesis protein;; Male sterility protein;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; RmlD substrate binding domain","UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","PREDICTED: UDP-glucuronic acid decarboxylase 6 [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699)"]
["Bra029621","Bra029621",44.735212,2907,54.501262,3562,45.915458,2741,37.309249,1716,31.126743,1381,34.795945,1538,{"v":2.01504155271279e-06,"d":"2.02E-06"},-1.04102003214863,"down","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; ","--","--","[S]","Function unknown","PPPDE putative peptidase domain","DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1","S","Function unknown","PREDICTED: desumoylating isopeptidase 1-like [Brassica rapa] ","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)"]
["Bra039540","Bra039540",6.645629,1178,10.016739,1912,9.502549,1612,63.258489,8464,61.749664,7807,57.069892,7322,{"v":7.65397086575655e-14,"d":"7.65E-14"},2.21501872067142,"up","[G]","Carbohydrate transport and metabolism","Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: pyruvate metabolic process (GO:0006090);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: photosynthesis (GO:0015979);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: ligase activity (GO:0016874);; Biological Process: starch biosynthetic process (GO:0019252);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: pyruvate, phosphate dikinase activity (GO:0050242);; ","K01006|0|brp:103870831|K01006 pyruvate, orthophosphate dikinase [EC:2.7.9.1] | (RefSeq) pyruvate, phosphate dikinase 1, chloroplastic","Pyruvate metabolism (ko00620);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)","--","--","PEP-utilising enzyme, TIM barrel domain;; Pyruvate phosphate dikinase, PEP/pyruvate binding domain;; PEP-utilising enzyme, mobile domain","Pyruvate, phosphate dikinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPDK PE=1 SV=2","G","Carbohydrate transport and metabolism","BnaA01g18450D [Brassica napus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)"]
["Bra001090","Bra001090",191.604297,29964,529.285595,83458,536.696529,77539,68.663497,7597,176.474911,18782,169.485492,18172,0.000204343457577677,-2.07892165093004,"down","[E]","Amino acid transport and metabolism","Molecular Function: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity (GO:0003871);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: methionine synthase activity (GO:0008705);; Biological Process: methionine biosynthetic process (GO:0009086);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: pollen exine formation (GO:0010584);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (GO:0016628);; Biological Process: methylation (GO:0032259);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; Molecular Function: fatty-acyl-CoA reductase (alcohol-forming) activity (GO:0080019);; ","K00549|0|brp:103859011|K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] | (RefSeq) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2","Cysteine and methionine metabolism (ko00270);; Selenocompound metabolism (ko00450);; Biosynthesis of amino acids (ko01230)","[E]","Amino acid transport and metabolism","Cobalamin-independent synthase, Catalytic domain;; Cobalamin-independent synthase, N-terminal domain","5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=MS2 PE=1 SV=1","E","Amino acid transport and metabolism","PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Brassica rapa]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: extracellular region (GO:0005576)"]