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["Supplementary Table 1. The identified parameters and instructions used for MASCOT searches."]
["Item","Value"]
["Enzyme","Trypsin"]
["Max Missed Cleavages",2]
["Fixed modifications ","Carbamidomethyl (C), TMT 6plex (N-term), TMT 6plex (K) "]
["Variable modifications","Oxidation (M), TMT 6plex (Y)"]
["Peptide Mass Tolerance","± 20 ppm"]
["Fragment Mass Tolerance","0.1Da"]
["Database pattern ","Decoy"]
["Peptide FDR","≤0.01"]
["Database","Swissprot_mouse_17042_20200217 "]
["Protein Quantification","The protein ratios are calculated as the median of only unique peptides of the protein."]
["Experimental Bias","Normalizes all peptide ratios by the median protein ratio. The median protein ratio should be 1 after the normalization. "]

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