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["Table S5. Detailed information of six genes with hemizygous variants in our probands."]
["Gene symbol","Genbank No.","Chr","Position","Ref","Alt","Effect","Nucleotide change","AA. alteration","RVIS (percentile)","pLI  (percentile)","cytoBand","avsnp150","gnomAD_exome_ALL","gnomAD_genome_ALL","Description","Patient_ID","TADA_FDR_Our_data","TADA_FDR_Our_and_Public_NDD_data","Novel gene screening (PMID)","SFARI_gene-score","SFARI_syndromic","SFARI_number-of-reports","SFARI_number-autism-reports","Recurrent_in_10_NDD_publications","PMID:25363760 (ASD)","PMID:26402605 (ASD)","PMID:27479843 (ID)","PMID:28135719 (UDD)","PMID:28191889 (ASD)","PMID:28263302 (ASD)","PMID:29262854 (ASD,ID,DD,SCZ)","PMID:29346770 (ASD)","PMID:30559488 (ASD,ID,DD)","PMID:31981491 (ASD)","OMIM.refGene"]
["PTCHD1","NM_173495","chrX",23398164,"C","T","nonsynonymous","c.808C>T","p.R270C","-1.467 (4.2%)","0.947 (14.98%)","Xp22.11","rs745672569",{"v":1.119E-5,"d":"1.12E-05"},"-","Cdc42 guanine nucleotide exchange factor 9","A1789",0.451380092587219,0.00450053053345912,"Known (25131214/20844286)",1,0,11,7,1,"-","-","-","-","-","-","-","-","Y","-","-"]
["ATP6AP2","NM_005765","chrX",40456840,"A","G","nonsynonymous","c.458A>G","p.Q153R","-0.519 (21.0%)","0.785 (22.10%)","Xp11.4","-","-","-","patched domain containing 1",5896,0.67510366628432,0.706456918846182,"Known (26467484)","NA","NA","NA","NA",0,"-","-","-","-","-","-","-","-","-","-","Mental retardation, X-linked, with epilepsy"]
["ARHGEF9","NM_015185","chrX",62893983,"G","A","nonsynonymous","c.859C>T","p.R287C","0.341261405 (71.2%)","0.983 (11.21%)","Xq11.1","-","-","-","ATPase H+ transporting accessory protein 2","A3013",0.78408995972658,1.20302001919967E-3,"Known (28589177/29130122)",1,0,10,4,0,"-","-","-","-","-","-","-","-","-","-","Epileptic encephalopathy, early infantile, 8"]
["SLC16A2","NM_006517","chrX",73641872,"-","A","frameshift","c.401dupA","p.N136Kfs*30","-0.095 (43.8%)","0.934 (15.84%)","Xq13.2","-","-","-","solute carrier family 16 member 2",5442,0.540285830199494,1,"Known (24170966)","NA","NA","NA","NA",0,"-","-","-","-","-","-","-","-","-","-","Allan-Herndon-Dudley syndrome"]
["SLC16A2","NM_006517","chrX",73744208,"G","A","nonsynonymous","c.590G>A","p.R197H","-0.095 (43.8%)","0.934 (15.84%)","Xq13.2","rs727504155","-","-","solute carrier family 16 member 2",6120,0.540285830199494,1,"Known (24170966)","NA","NA","NA","NA",0,"-","-","-","-","-","-","-","-","-","-","Allan-Herndon-Dudley syndrome"]
["PLXNA3","NM_017514","chrX",153692296,"G","A","nonsynonymous","c.1550G>A","p.C517Y","-2.049 (1.8%)","0.983 (11.20%)","Xq28","-","-","-","plexin A3",9928,0.848688533939997,0.815396855960454,"Novel",3,0,3,2,0,"-","-","-","-","-","-","-","-","-","-","-"]
["SLC9A7","NM_032591","chrX",46513159,"C","G","splicing","c.1030-1G>C","NA","-0.447 (24.1%)","0.954 (14.38%)","Xp11.23","rs781216966",{"v":1.717E-5,"d":"1.72E-05"},"-","solute carrier family 9 member A7","s5207",0.650646085918729,1,"Known (30335141)","NA","NA","NA","NA",0,"-","-","-","-","-","-","-","-","-","-","-"]