{"text_format":"3","workbook":"xls","n_sheets":18,"sheets":["Table S1","Table S2","Table S3","Table S4","Table S5","Table S6","Table S7","Table S8","Table S9","Table S10","Table S11","Table S12","Table S13 ","Table S14","Table S15","Table S16","Table S17","Table S18"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Table S1","index":0,"n_rows":560,"n_cols":13,"rows_kept":560,"flags":["formulas_cached_only"]}
["Supplementary Table S1 Information on the 558 Chinese mungbean landraces sequenced in this study"]
["ID","Accession name","Origin","Sub-population","Clean reads","Mapping rate","Average depth","Coverage","Coverage at least 6X","Coverage at least 12X","Coverage at least 18X","Quality scores Q20 (%)","Base content (GC)"]
["C1","YUAN LV DOU","Hunan","Southern",37495094,{"v":0.9635663535074749,"d":"96.36%"},{"v":12.145199563521507,"d":"12.15"},{"v":0.9093138247974711,"d":"90.93%"},{"v":0.7964840214263824,"d":"79.65%"},{"v":0.2905935706768911,"d":"29.06%"},{"v":0.054478070856047084,"d":"5.45%"},{"v":0.9749,"d":"97.49%"},{"v":0.3472,"d":"34.72%"}]
["C2","YU NAN CHUN","Hunan","Southern",36851574,{"v":0.9716401530094753,"d":"97.16%"},{"v":11.936754191358487,"d":"11.94"},{"v":0.9058072250563207,"d":"90.58%"},{"v":0.7912345788500733,"d":"79.12%"},{"v":0.2920321024444221,"d":"29.20%"},{"v":0.05625366359293601,"d":"5.63%"},{"v":0.9758,"d":"97.58%"},{"v":0.34380000000000005,"d":"34.38%"}]
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["C6","CHE LV DOU","Hunan","Southern",31415460,{"v":0.9684448039277477,"d":"96.84%"},{"v":10.175918776995928,"d":"10.18"},{"v":0.9020651179775261,"d":"90.21%"},{"v":0.6973610042376657,"d":"69.74%"},{"v":0.16208100632263778,"d":"16.21%"},{"v":0.03091301143899909,"d":"3.09%"},{"v":0.9736,"d":"97.36%"},{"v":0.34600000000000003,"d":"34.60%"}]
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["C542","YE SHENG LV DOU","Hebei","Northern",27313240,{"v":0.9724011138920172,"d":"97.24%"},{"v":8.847150790616984,"d":"8.85"},{"v":0.8891357565031548,"d":"88.91%"},{"v":0.5964406402233071,"d":"59.64%"},{"v":0.10148920730616318,"d":"10.15%"},{"v":0.02323874376689158,"d":"2.32%"},{"v":0.9578,"d":"95.78%"},{"v":0.3448,"d":"34.48%"}]
["C543","YE SHENG LV DOU","Hebei","Northern",27130140,{"v":0.9728053743917282,"d":"97.28%"},{"v":8.787842070385992,"d":"8.79"},{"v":0.8894518515753809,"d":"88.95%"},{"v":0.5940859879355417,"d":"59.41%"},{"v":0.10259219186413535,"d":"10.26%"},{"v":0.023272979355842688,"d":"2.33%"},{"v":0.9614,"d":"96.14%"},{"v":0.3448,"d":"34.48%"}]
["C544","YE SHENG LV DOU","Liaoning","Northern",27655354,{"v":0.9775104668701764,"d":"97.75%"},{"v":8.957966429683648,"d":"8.96"},{"v":0.8914444777339635,"d":"89.14%"},{"v":0.6518938811883275,"d":"65.19%"},{"v":0.13394685622094996,"d":"13.39%"},{"v":0.02875093271951187,"d":"2.88%"},{"v":0.9658,"d":"96.58%"},{"v":0.3492,"d":"34.92%"}]
["C545","LV DOU","Hebei","Northern",26156454,{"v":0.9719824407391002,"d":"97.20%"},{"v":8.472451187989297,"d":"8.47"},{"v":0.8924935866953202,"d":"89.25%"},{"v":0.5673559763741095,"d":"56.74%"},{"v":0.08936006547337205,"d":"8.94%"},{"v":0.020859536610830315,"d":"2.09%"},{"v":0.9592,"d":"95.92%"},{"v":0.34729999999999994,"d":"34.73%"}]
["C546","PAO LV DOU","Chongqing","Southern",28850526,{"v":0.974041305174124,"d":"97.40%"},{"v":9.345099809126118,"d":"9.35"},{"v":0.9066749894807189,"d":"90.67%"},{"v":0.6446783928662275,"d":"64.47%"},{"v":0.12701105499645046,"d":"12.70%"},{"v":0.02600706061190762,"d":"2.60%"},{"v":0.9595999999999999,"d":"95.96%"},{"v":0.34619999999999995,"d":"34.62%"}]
["C547","HUANG DA LV","Zhejiang","Southern",34018044,{"v":0.9777876117745041,"d":"97.78%"},{"v":11.018933120707882,"d":"11.02"},{"v":0.8985886940986186,"d":"89.86%"},{"v":0.7541233667031135,"d":"75.41%"},{"v":0.2508152800399807,"d":"25.08%"},{"v":0.052153879475166046,"d":"5.22%"},{"v":0.9642000000000001,"d":"96.42%"},{"v":0.3427,"d":"34.27%"}]
["C548","DA LV ZI","Zhejiang","Southern",29240418,{"v":0.9745545361218845,"d":"97.46%"},{"v":9.471391428723619,"d":"9.47"},{"v":0.8934969308757611,"d":"89.35%"},{"v":0.6583090354191051,"d":"65.83%"},{"v":0.1467330820968581,"d":"14.67%"},{"v":0.03185671002826932,"d":"3.19%"},{"v":0.9597,"d":"95.97%"},{"v":0.3461,"d":"34.61%"}]
["C549","DA MI LV","Hebei","Southern",31500492,{"v":0.9755582865181915,"d":"97.56%"},{"v":10.203461863280372,"d":"10.20"},{"v":0.8986556860675874,"d":"89.87%"},{"v":0.7033050638942787,"d":"70.33%"},{"v":0.18621170227927678,"d":"18.62%"},{"v":0.037563945095487244,"d":"3.76%"},{"v":0.9641,"d":"96.41%"},{"v":0.3453,"d":"34.53%"}]
["C550","JIAN LV DOU","Hebei","Northern",27119170,{"v":0.9750413452919098,"d":"97.50%"},{"v":8.784288729801972,"d":"8.78"},{"v":0.8923349334393446,"d":"89.23%"},{"v":0.6156463003184689,"d":"61.56%"},{"v":0.11270471628104312,"d":"11.27%"},{"v":0.02448935985471309,"d":"2.45%"},{"v":0.9611,"d":"96.11%"},{"v":0.3447,"d":"34.47%"}]
["C551","DA LV DOU","Hebei","Northern",26430060,{"v":0.9757290373158441,"d":"97.57%"},{"v":8.56107610173873,"d":"8.56"},{"v":0.891823127148358,"d":"89.18%"},{"v":0.5977886033749558,"d":"59.78%"},{"v":0.1039441564379063,"d":"10.39%"},{"v":0.02297268266691195,"d":"2.30%"},{"v":0.9592,"d":"95.92%"},{"v":0.3433,"d":"34.33%"}]
["C552","HONG DA LV DOU","Hebei","Northern",32397200,{"v":0.9745516587853271,"d":"97.46%"},{"v":10.49391846568831,"d":"10.49"},{"v":0.8953260688166131,"d":"89.53%"},{"v":0.7115515219732955,"d":"71.16%"},{"v":0.19422466344914177,"d":"19.42%"},{"v":0.03903596097064256,"d":"3.90%"},{"v":0.9645,"d":"96.45%"},{"v":0.348,"d":"34.80%"}]
["C553","DA LV DOU","Zhejiang","Southern",26533524,{"v":0.9730052819218434,"d":"97.30%"},{"v":8.594589577598803,"d":"8.59"},{"v":0.877591657999276,"d":"87.76%"},{"v":0.5725388092004006,"d":"57.25%"},{"v":0.10325119348029312,"d":"10.33%"},{"v":0.026219684479379102,"d":"2.62%"},{"v":0.9594,"d":"95.94%"},{"v":0.3452,"d":"34.52%"}]
["C554","MA DA LV DOU","Hebei","Southern",28203082,{"v":0.9704577322435896,"d":"97.05%"},{"v":9.13538339699485,"d":"9.14"},{"v":0.9094454765519806,"d":"90.94%"},{"v":0.6333170511659385,"d":"63.33%"},{"v":0.11899102817457032,"d":"11.90%"},{"v":0.023190625208256696,"d":"2.32%"},{"v":0.963,"d":"96.30%"},{"v":0.3464,"d":"34.64%"}]
["C555","PO LV DOU","Zhejiang","Southern",35453472,{"v":0.9723645684123687,"d":"97.24%"},{"v":11.483888869827128,"d":"11.48"},{"v":0.9003987362079395,"d":"90.04%"},{"v":0.7309501875225557,"d":"73.10%"},{"v":0.21464106145493578,"d":"21.46%"},{"v":0.04239286044886596,"d":"4.24%"},{"v":0.9640000000000001,"d":"96.40%"},{"v":0.35229999999999995,"d":"35.23%"}]
["C556","LV DOU","Hebei","Southern",29887148,{"v":0.9709838824366915,"d":"97.10%"},{"v":9.680876565998279,"d":"9.68"},{"v":0.89961406229645,"d":"89.96%"},{"v":0.6809126867688339,"d":"68.09%"},{"v":0.1547718549227552,"d":"15.48%"},{"v":0.03217765517825408,"d":"3.22%"},{"v":0.9588,"d":"95.88%"},{"v":0.34700000000000003,"d":"34.70%"}]
["C557","JIAN LV DOU","Inner Mongolia","Northern",24750488,{"v":0.9727169823883877,"d":"97.27%"},{"v":8.0170386038916,"d":"8.02"},{"v":0.8938356286923768,"d":"89.38%"},{"v":0.5518457408194587,"d":"55.18%"},{"v":0.08230384152568297,"d":"8.23%"},{"v":0.01964330295313871,"d":"1.96%"},{"v":0.9636,"d":"96.36%"},{"v":0.3458,"d":"34.58%"}]
["C558","LV DOU","Shaanxi","Northern",29107918,{"v":0.972914448913866,"d":"97.29%"},{"v":9.428472775361486,"d":"9.43"},{"v":0.9021507458196276,"d":"90.22%"},{"v":0.6530901703588518,"d":"65.31%"},{"v":0.1363413758887592,"d":"13.63%"},{"v":0.027688299253701955,"d":"2.77%"},{"v":0.9669,"d":"96.69%"},{"v":0.3469,"d":"34.69%"}]

{"sheet":"Table S2","index":1,"n_rows":18,"n_cols":13,"rows_kept":18,"merged":[[2,0,10,0],[11,0,17,0]],"flags":["formulas_cached_only"]}
["Supplementary Table 2 Summary of variant calling in all accessions"]
["Type","Region","Chr1","Chr2","Chr3","Chr4","Chr5","Chr6","Chr7","Chr8","Chr9","Chr10","Chr11"]
["SNP","Intergenic",355392,189776,63439,136644,187383,313273,282234,307024,200469,91126,82708]
[null,"Exon",10072,5989,4007,4715,6444,9196,8221,9441,5599,3344,2964]
[null,"Intron",38538,22851,15198,14998,28496,33506,33327,32841,23007,11630,12712]
[null,"Non-synonymous SNPs",3713,3080,1830,1963,2763,3115,3645,4139,2652,1646,1269]
[null,"Synonymous SNPs",6428,2953,2207,2779,3724,6049,4628,5311,2972,1725,1717]
[null,"N/S (non-synonymous/synonymous) ratio",{"v":0.5776291225886746,"d":"0.58"},{"v":1.0430071114121233,"d":"1.04"},{"v":0.8291798821930222,"d":"0.83"},{"v":0.7063691975530767,"d":"0.71"},{"v":0.7419441460794844,"d":"0.74"},{"v":0.5149611506034055,"d":"0.51"},{"v":0.7875972342264477,"d":"0.79"},{"v":0.7793259273206552,"d":"0.78"},{"v":0.892328398384926,"d":"0.89"},{"v":0.9542028985507246,"d":"0.95"},{"v":0.7390797903319744,"d":"0.74"}]
[null,"Significant difference (Frame_shift, Start_lost, Stop_gained, Stop_lost et al.)",218,150,82,107,150,193,242,246,118,76,65]
[null,"Ts/Tv (transition/transversion) ratio",1.93,{"v":1.960732,"d":"1.96"},{"v":1.72287,"d":"1.72"},{"v":1.97103,"d":"1.97"},{"v":1.9849,"d":"1.98"},{"v":1.984235,"d":"1.98"},{"v":2.07743,"d":"2.08"},{"v":2.00412,"d":"2.00"},{"v":1.911658,"d":"1.91"},{"v":1.908803,"d":"1.91"},{"v":2.000142,"d":"2.00"}]
[null,"SNP number",410306,222575,83768,158614,223487,360316,328610,353982,233979,107015,99528]
["Indel","Deletion number",31829,16882,9454,13410,19813,27109,26915,27762,18334,8899,8640]
[null,"Insertion number",28518,14728,8915,12456,18236,24824,24029,26187,16263,8194,7858]
[null,"Intergenic",51724,26541,14501,21961,31540,44265,42962,45902,29394,14397,13446]
[null,"Exon",539,325,180,269,292,497,426,511,251,209,153]
[null,"Intron",7741,4571,3598,3459,6258,6986,7288,7070,4803,2484,2784]
[null,"Significant difference (Exon_lose, Frame_shift, Start_lost, Stop_gained, Stop_lost et al.)",407,249,134,202,223,378,341,390,184,167,118]
[null,"Indel number",62516,32867,19024,26740,39273,53582,52751,55497,36042,17612,17095]

{"sheet":"Table S3","index":2,"n_rows":4261,"n_cols":12,"rows_kept":4261,"flags":["formulas_cached_only"]}
["Supplementary Table 3 Details of all large-effect variations"]
["Chromosome","Mutation position","Variation type","Ref","Alt","Mutation type","Gene ID","Protein names","Biological process (GO)","Ccellular component (GO)","Molecular function (GO)","Gene ontology (GO)"]
[1,171694,"INDEL","C","CT","frameshift_variant","Vradi01g00130","-","-","-","-","-"]
[1,507047,"INDEL","C","CA","frameshift_variant","Vradi01g00330","Glucose-6-phosphate 1-epimerase (EC 5.1.3.15)","carbohydrate metabolic process [GO:0005975]","-","carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]","carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]; carbohydrate metabolic process [GO:0005975]"]
[1,715733,"INDEL","CCAGATTGCAAAAG","C","frameshift_variant","Vradi01g00410","-","-","-","-","-"]
[1,812439,"INDEL","AC","A","frameshift_variant","Vradi01g00510","polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1","-","-","ATP binding [GO:0005524]; kinase activity [GO:0016301]","ATP binding [GO:0005524]; kinase activity [GO:0016301]"]
[1,812510,"INDEL","CT","C","frameshift_variant","Vradi01g00510","polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1","-","-","ATP binding [GO:0005524]; kinase activity [GO:0016301]","ATP binding [GO:0005524]; kinase activity [GO:0016301]"]
[1,855690,"INDEL","TC","T","frameshift_variant","Vradi01g00540","Polynucleotide phosphorylase 1 (EC 2.7.7.8)","mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]","cytoplasm [GO:0005737]","nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]","cytoplasm [GO:0005737]; nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]"]
[1,857425,"INDEL","ATTCTTGTTGCGAGGTATACTAAT","A","frameshift_variant","Vradi01g00540","Polynucleotide phosphorylase 1 (EC 2.7.7.8)","mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]","cytoplasm [GO:0005737]","nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]","cytoplasm [GO:0005737]; nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]"]
[1,857574,"SNP","G","A","stop_gained","Vradi01g00540","Polynucleotide phosphorylase 1 (EC 2.7.7.8)","mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]","cytoplasm [GO:0005737]","nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]","cytoplasm [GO:0005737]; nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]"]
[1,858122,"INDEL","GAT","G","frameshift_variant","Vradi01g00540","Polynucleotide phosphorylase 1 (EC 2.7.7.8)","mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]","cytoplasm [GO:0005737]","nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]","cytoplasm [GO:0005737]; nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]"]
[1,858615,"INDEL","TG","T","frameshift_variant","Vradi01g00540","Polynucleotide phosphorylase 1 (EC 2.7.7.8)","mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]","cytoplasm [GO:0005737]","nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]","cytoplasm [GO:0005737]; nuclease activity [GO:0004518]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396]"]
[1,867430,"INDEL","TCGTGATGCTACTGATGACAAAGTTA","T","frameshift_variant","Vradi01g00550","Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)","isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]","-","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]"]
[1,867485,"SNP","T","G","splice_donor_variant","Vradi01g00550","Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)","isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]","-","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]"]
[1,869807,"INDEL","G","GA","frameshift_variant","Vradi01g00550","Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)","isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]","-","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]"]
[1,869847,"SNP","C","T","stop_gained","Vradi01g00550","Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)","isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]","-","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]"]
[1,869875,"INDEL","GA","G","frameshift_variant","Vradi01g00550","Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)","isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]","-","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]"]
[1,870047,"INDEL","CTTGCTATGTATAATGTTGATGAGGTTTGCTTCATTTAATAT","C","frameshift_variant&splice_donor_variant","Vradi01g00550","Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)","isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]","-","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]","isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]"]
[1,905752,"INDEL","ATCCCATATGAC","A","frameshift_variant","Vradi01g00570","transcription factor MYB118-like","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[1,1131252,"INDEL","AT","A","frameshift_variant","Vradi01g00670","Phospholipid-transporting ATPase (EC 7.6.2.1)","phospholipid transport [GO:0015914]","integral component of membrane [GO:0016021]","ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; magnesium ion binding [GO:0000287]; phospholipid transport [GO:0015914]"]
[1,1131278,"SNP","T","G","splice_donor_variant","Vradi01g00670","Phospholipid-transporting ATPase (EC 7.6.2.1)","phospholipid transport [GO:0015914]","integral component of membrane [GO:0016021]","ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; magnesium ion binding [GO:0000287]; phospholipid transport [GO:0015914]"]
[1,1131378,"INDEL","CA","C","frameshift_variant","Vradi01g00670","Phospholipid-transporting ATPase (EC 7.6.2.1)","phospholipid transport [GO:0015914]","integral component of membrane [GO:0016021]","ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; magnesium ion binding [GO:0000287]; phospholipid transport [GO:0015914]"]
[1,1131418,"INDEL","C","CAA","frameshift_variant","Vradi01g00670","Phospholipid-transporting ATPase (EC 7.6.2.1)","phospholipid transport [GO:0015914]","integral component of membrane [GO:0016021]","ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; magnesium ion binding [GO:0000287]; phospholipid transport [GO:0015914]"]
[1,1131420,"INDEL","G","GGA","frameshift_variant","Vradi01g00670","Phospholipid-transporting ATPase (EC 7.6.2.1)","phospholipid transport [GO:0015914]","integral component of membrane [GO:0016021]","ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; magnesium ion binding [GO:0000287]; phospholipid transport [GO:0015914]"]
[1,1304971,"INDEL","A","AC","splice_donor_variant","Vradi01g00730","uncharacterized protein LOC106771695","positive regulation of leaf senescence [GO:1900057]","integral component of mitochondrial outer membrane [GO:0031307]","voltage-gated anion channel activity [GO:0008308]","integral component of mitochondrial outer membrane [GO:0031307]; voltage-gated anion channel activity [GO:0008308]; positive regulation of leaf senescence [GO:1900057]"]
[1,1322528,"INDEL","A","ATAAG","frameshift_variant","Vradi01g00750","GDSL esterase/lipase At3g27950","-","integral component of membrane [GO:0016021]","hydrolase activity, acting on ester bonds [GO:0016788]","integral component of membrane [GO:0016021]; hydrolase activity, acting on ester bonds [GO:0016788]"]
[1,1374897,"SNP","C","T","stop_gained","Vradi01g00800","histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like","-","nucleus [GO:0005634]","histone-lysine N-methyltransferase activity [GO:0018024]; zinc ion binding [GO:0008270]","nucleus [GO:0005634]; histone-lysine N-methyltransferase activity [GO:0018024]; zinc ion binding [GO:0008270]"]
[1,1387080,"INDEL","T","TGA","frameshift_variant","Vradi01g00820","-","-","-","-","-"]
[1,1387081,"INDEL","*","GA","frameshift_variant","Vradi01g00820","-","-","-","-","-"]
[1,1387087,"INDEL","AGT","A","frameshift_variant","Vradi01g00820","-","-","-","-","-"]
[1,1387180,"INDEL","TAACATTACAAGCATGTGAACAAGCTTTACCAGCAGC","T","exon_loss_variant","Vradi01g00820","-","-","-","-","-"]
[1,1682046,"INDEL","TC","T","frameshift_variant","Vradi01g00990","RING-H2 finger protein ATL46-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,1874050,"INDEL","TG","T","frameshift_variant","Vradi01g01140","-","-","-","-","-"]
[1,1924623,"INDEL","AG","A","frameshift_variant","Vradi01g01170","zinc finger AN1 domain-containing stress-associated protein 12","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[1,1948689,"SNP","C","T","splice_acceptor_variant","Vradi01g01190","CRM-domain containing factor CFM2, chloroplastic","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,1967671,"INDEL","TCTCTCAGCAG","T","frameshift_variant","Vradi01g01200","-","-","-","-","-"]
[1,2087654,"INDEL","A","ACTCAGACAGCAAAACATCCTTT","frameshift_variant","Vradi01g01210","Dirigent protein","-","apoplast [GO:0048046]","-","apoplast [GO:0048046]"]
[1,2087657,"SNP","*","C","frameshift_variant","Vradi01g01210","Dirigent protein","-","apoplast [GO:0048046]","-","apoplast [GO:0048046]"]
[1,2087660,"SNP","*","A","frameshift_variant","Vradi01g01210","Dirigent protein","-","apoplast [GO:0048046]","-","apoplast [GO:0048046]"]
[1,2087665,"SNP","*","A","frameshift_variant","Vradi01g01210","Dirigent protein","-","apoplast [GO:0048046]","-","apoplast [GO:0048046]"]
[1,2087670,"SNP","*","A","frameshift_variant","Vradi01g01210","Dirigent protein","-","apoplast [GO:0048046]","-","apoplast [GO:0048046]"]
[1,2179642,"SNP","C","G","splice_donor_variant","Vradi01g01260","uncharacterized protein LOC106764742","-","CCR4-NOT complex [GO:0030014]","ubiquitin-protein transferase activity [GO:0004842]","CCR4-NOT complex [GO:0030014]; ubiquitin-protein transferase activity [GO:0004842]"]
[1,2183688,"INDEL","GT","G","frameshift_variant","Vradi01g01270","paired amphipathic helix protein Sin3-like 2","-","nucleus [GO:0005634]","transcription corepressor activity [GO:0003714]","nucleus [GO:0005634]; transcription corepressor activity [GO:0003714]"]
[1,2223506,"SNP","T","C","start_lost","Vradi01g01290","ABC transporter B family member 18-like","-","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]; transcription corepressor activity [GO:0003714]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]; transcription corepressor activity [GO:0003714]"]
[1,2307564,"INDEL","AAATTTCCCTGTATTGCTGTTTTAAACTCACCCTCGATT","A","frameshift_variant","Vradi01g01340","Midasin","ribosomal large subunit assembly [GO:0000027]","nucleus [GO:0005634]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","nucleus [GO:0005634]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ribosomal large subunit assembly [GO:0000027]"]
[1,2308348,"INDEL","TC","T","frameshift_variant","Vradi01g01340","Midasin","ribosomal large subunit assembly [GO:0000027]","nucleus [GO:0005634]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","nucleus [GO:0005634]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ribosomal large subunit assembly [GO:0000027]"]
[1,2809639,"SNP","G","A","splice_donor_variant","Vradi01g01570","AAA-ATPase ASD, mitochondrial isoform X2","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[1,2830686,"INDEL","TTA","T","frameshift_variant","Vradi01g01580","-","-","-","-","-"]
[1,2884545,"INDEL","GGA","G","frameshift_variant","Vradi01g01610","-","-","-","-","-"]
[1,2884549,"INDEL","TGG","T","frameshift_variant","Vradi01g01610","-","-","-","-","-"]
[1,2884555,"INDEL","TCG","T","frameshift_variant","Vradi01g01610","-","-","-","-","-"]
[1,2884560,"INDEL","TAA","T","frameshift_variant","Vradi01g01610","-","-","-","-","-"]
[1,2884563,"INDEL","CAATGAGAAGAAAA","C","frameshift_variant","Vradi01g01610","-","-","-","-","-"]
[1,2908763,"INDEL","G","GTATA","splice_donor_variant","Vradi01g01630","Procollagen-proline 4-dioxygenase (EC 1.14.11.2)","-","endoplasmic reticulum membrane [GO:0005789]","iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-proline 4-dioxygenase activity [GO:0004656]","endoplasmic reticulum membrane [GO:0005789]; iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-proline 4-dioxygenase activity [GO:0004656]"]
[1,3325106,"SNP","A","G","splice_donor_variant","Vradi01g01850","transcription factor MYB16","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[1,3408286,"INDEL","AG","A","frameshift_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3408419,"INDEL","CCAGA","C","frameshift_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3408426,"INDEL","GT","G","frameshift_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3408430,"INDEL","TA","T","frameshift_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3408458,"INDEL","TCAGG","T","frameshift_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3408505,"SNP","G","T","splice_donor_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3411886,"INDEL","AC","A","frameshift_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3411957,"SNP","C","T","stop_gained","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3411961,"INDEL","C","CTT","frameshift_variant","Vradi01g01880","polypyrimidine tract-binding protein homolog 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,3575461,"INDEL","TATTACC","T","frameshift_variant&splice_donor_variant","Vradi01g01890","uncharacterized protein LOC106778383 isoform X2","-","-","-","-"]
[1,3578945,"SNP","G","A","stop_gained","Vradi01g01890","uncharacterized protein LOC106778383 isoform X2","-","-","-","-"]
[1,4261401,"INDEL","AG","A","frameshift_variant","Vradi01g02030","-","-","-","-","-"]
[1,4412923,"SNP","A","C","splice_acceptor_variant","Vradi01g02120","THO complex subunit 2","mRNA export from nucleus [GO:0006406]; mRNA processing [GO:0006397]","THO complex [GO:0000347]","-","THO complex [GO:0000347]; mRNA export from nucleus [GO:0006406]; mRNA processing [GO:0006397]"]
[1,4467438,"SNP","G","A","stop_gained","Vradi01g02150","IRK-interacting protein","-","-","-","-"]
[1,4523259,"INDEL","G","GT","frameshift_variant","Vradi01g02220","Poly(A) polymerase (EC 2.7.7.19)","mRNA processing [GO:0006397]; RNA 3'-end processing [GO:0031123]; RNA polyadenylation [GO:0043631]","nucleus [GO:0005634]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; polynucleotide adenylyltransferase activity [GO:0004652]; RNA binding [GO:0003723]","nucleus [GO:0005634]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; polynucleotide adenylyltransferase activity [GO:0004652]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]; RNA 3'-end processing [GO:0031123]; RNA polyadenylation [GO:0043631]"]
[1,4530441,"SNP","G","C","start_lost","Vradi01g02240","pentatricopeptide repeat-containing protein At3g61520, mitochondrial","-","-","-","-"]
[1,4530448,"SNP","C","T","stop_gained","Vradi01g02240","pentatricopeptide repeat-containing protein At3g61520, mitochondrial","-","-","-","-"]
[1,4530937,"SNP","G","T","stop_gained","Vradi01g02240","pentatricopeptide repeat-containing protein At3g61520, mitochondrial","-","-","-","-"]
[1,4546847,"INDEL","TG","T","frameshift_variant","Vradi01g02260","DExH-box ATP-dependent RNA helicase DExH3","-","-","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]"]
[1,4578225,"INDEL","TC","T","frameshift_variant","Vradi01g02290","eukaryotic peptide chain release factor GTP-binding subunit ERF3A","translation [GO:0006412]","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]","GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation [GO:0006412]"]
[1,4594892,"INDEL","ACT","A","frameshift_variant","Vradi01g02310","pre-mRNA-splicing factor SPF27 homolog","mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[1,4594897,"INDEL","G","GTA","frameshift_variant","Vradi01g02310","pre-mRNA-splicing factor SPF27 homolog","mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[1,4594933,"SNP","G","C","stop_gained","Vradi01g02310","pre-mRNA-splicing factor SPF27 homolog","mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[1,4618032,"SNP","C","A","stop_gained","Vradi01g02340","actin-interacting protein 1-2","-","-","-","-"]
[1,4698435,"SNP","G","T","stop_gained","Vradi01g02440","Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 subunit 8) (eIF3 p110)","formation of cytoplasmic translation initiation complex [GO:0001732]","eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]","translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]","eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]; formation of cytoplasmic translation initiation complex [GO:0001732]"]
[1,4725984,"INDEL","C","CGGTT","frameshift_variant","Vradi01g02460","golgin candidate 2","Golgi organization [GO:0007030]","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]","-","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]; Golgi organization [GO:0007030]"]
[1,4763550,"INDEL","ATTTTCAGTATCGG","A","splice_acceptor_variant","Vradi01g02540","uncharacterized protein LOC106773183 isoform X1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,4805307,"INDEL","TGATCCAGAGCTTCATCATAGTACCGCTTGGCTAGATGAAGGTCA","T","frameshift_variant","Vradi01g02590","ERAD-associated E3 ubiquitin-protein ligase component HRD3A","-","-","-","-"]
[1,4805354,"INDEL","TGGAAGTCCTTGACCATGCTCATGCATGTATCCAA","T","frameshift_variant","Vradi01g02590","ERAD-associated E3 ubiquitin-protein ligase component HRD3A","-","-","-","-"]
[1,4820144,"INDEL","CAT","C","frameshift_variant","Vradi01g02610","uncharacterized protein At3g17950 isoform X1","-","-","-","-"]
[1,4824309,"INDEL","TACAC","T","splice_donor_variant","Vradi01g02620","uncharacterized protein LOC106773143","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,4829140,"INDEL","TGCAGAAGTGTA","T","frameshift_variant","Vradi01g02640","uncharacterized protein LOC106770839 isoform X7","-","-","-","-"]
[1,4829154,"INDEL","AAATT","A","frameshift_variant","Vradi01g02640","uncharacterized protein LOC106770839 isoform X7","-","-","-","-"]
[1,4894479,"INDEL","CT","C","frameshift_variant","Vradi01g02690","-","-","-","-","-"]
[1,4894481,"INDEL","CTT","C","frameshift_variant","Vradi01g02690","-","-","-","-","-"]
[1,4896048,"INDEL","T","TGCCCATGATGGTCATCTTGA","frameshift_variant&stop_gained","Vradi01g02690","-","-","-","-","-"]
[1,4896789,"INDEL","GTCTGGGAGAACGCGTA","G","frameshift_variant","Vradi01g02690","-","-","-","-","-"]
[1,4896867,"INDEL","CAA","C","frameshift_variant","Vradi01g02690","-","-","-","-","-"]
[1,4896892,"INDEL","TTC","T","frameshift_variant","Vradi01g02690","-","-","-","-","-"]
[1,4897808,"INDEL","C","CA","frameshift_variant","Vradi01g02700","-","-","-","-","-"]
[1,4897818,"INDEL","C","CATCACTG","frameshift_variant&stop_gained","Vradi01g02700","-","-","-","-","-"]
[1,4897862,"INDEL","A","AACCT","frameshift_variant&stop_gained","Vradi01g02700","-","-","-","-","-"]
[1,4911357,"SNP","A","C","splice_acceptor_variant","Vradi01g02710","Acid phosphatase (EC 3.1.3.2)","-","-","acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]","acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]"]
[1,4922382,"INDEL","C","CG","frameshift_variant","Vradi01g02730","uncharacterized protein LOC106764470","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,4922384,"INDEL","A","ACGCCG","frameshift_variant","Vradi01g02730","uncharacterized protein LOC106764470","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,4922389,"SNP","*","G","frameshift_variant","Vradi01g02730","uncharacterized protein LOC106764470","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,4956117,"SNP","G","A","stop_gained","Vradi01g02760","uncharacterized protein LOC106780524","-","-","-","-"]
[1,4956168,"SNP","G","A","stop_gained","Vradi01g02760","uncharacterized protein LOC106780524","-","-","-","-"]
[1,4956261,"INDEL","C","CT","frameshift_variant","Vradi01g02760","uncharacterized protein LOC106780524","-","-","-","-"]
[1,4956330,"SNP","C","G","splice_acceptor_variant","Vradi01g02760","uncharacterized protein LOC106780524","-","-","-","-"]
[1,5030093,"INDEL","A","ACAATGGTGGTGGT","frameshift_variant","Vradi01g02860","uncharacterized protein LOC106763623","-","-","-","-"]
[1,5030094,"SNP","*","C","frameshift_variant","Vradi01g02860","uncharacterized protein LOC106763623","-","-","-","-"]
[1,5034948,"INDEL","TG","T","frameshift_variant","Vradi01g02870","kinesin-like protein KIN-13A","-","-","-","-"]
[1,5136225,"INDEL","G","GTA","frameshift_variant","Vradi01g02910","uncharacterized protein LOC106772948","mitochondrial cytochrome c oxidase assembly [GO:0033617]","mitochondrion [GO:0005739]","-","mitochondrion [GO:0005739]; mitochondrial cytochrome c oxidase assembly [GO:0033617]"]
[1,5191139,"INDEL","GA","G","frameshift_variant","Vradi01g02950","-","-","-","-","-"]
[1,5191154,"INDEL","GGATTCCATATA","G","frameshift_variant","Vradi01g02950","-","-","-","-","-"]
[1,5228044,"INDEL","TGTGTGC","T","frameshift_variant&splice_donor_variant","Vradi01g02980","-","-","-","-","-"]
[1,5228435,"INDEL","G","GGTAC","frameshift_variant","Vradi01g02980","-","-","-","-","-"]
[1,5299883,"SNP","T","A","splice_donor_variant","Vradi01g03040","methyl-CpG-binding domain-containing protein 2 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; zinc ion binding [GO:0008270]","nucleus [GO:0005634]; DNA binding [GO:0003677]; zinc ion binding [GO:0008270]"]
[1,5559870,"INDEL","T","TAA","frameshift_variant","Vradi01g03460","Arginyl-tRNA synthetase (EC 6.1.1.19)","arginyl-tRNA aminoacylation [GO:0006420]","cytoplasm [GO:0005737]","arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]","cytoplasm [GO:0005737]; arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]; arginyl-tRNA aminoacylation [GO:0006420]"]
[1,5610595,"SNP","A","G","splice_donor_variant","Vradi01g03500","probable glutamate carboxypeptidase LAMP1","-","-","carboxypeptidase activity [GO:0004180]","carboxypeptidase activity [GO:0004180]"]
[1,5673662,"SNP","T","G","splice_acceptor_variant","Vradi01g03560","receptor-like protein kinase 5","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[1,5685269,"INDEL","TG","T","frameshift_variant","Vradi01g03570","mitochondrial import inner membrane translocase subunit TIM17-2","-","-","-","-"]
[1,5696777,"INDEL","GAGGTAATTTTATTTTTCTTGTTTTTACTATTCTAATTGCCACATGATGGAGTTATTTTCAAATTGTATGATTTAATGGGTTCCTCATCATCATTATTATTTTAGACTGATTATCTTGACTGTTTACTAAAATC","G","frameshift_variant&splice_donor_variant","Vradi01g03580","-","-","-","-","-"]
[1,5697084,"SNP","G","T","stop_gained","Vradi01g03580","-","-","-","-","-"]
[1,5697171,"INDEL","AAGGTACTGTTTTTGCCGCTAGCTTTTCTTCTCATGTTAGAATTGTAACTTCTTTTATCTGCATGCTAAGCTTGTTTGCATTGATTTTTACTTTGT","A","frameshift_variant&splice_donor_variant","Vradi01g03580","-","-","-","-","-"]
[1,5697325,"INDEL","AAGGTACGTTAAAGTATTTTACAAACTTGGTCGCATTGATAAATGTTATTTATTTAAATTTGTTGTATTACTTTTTCGTCAATGATAGTAATTTATAATTCTTATTAATGTTTTTGCTACTATACCATATTCATTATATTCTTATATGCAATGGTTATTTACTAATTTAAGTATTATATTTTCAAC","A","frameshift_variant&splice_donor_variant","Vradi01g03580","-","-","-","-","-"]
[1,5697576,"INDEL","GCCGGTAAGTTGCAGTAAAGTTTGTGTATTATTTGTTTATT","G","splice_donor_variant","Vradi01g03580","-","-","-","-","-"]
[1,5730810,"INDEL","A","AATCACAGAATTGTGACTTCTTT","frameshift_variant","Vradi01g03620","putative ABC transporter B family member 8","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[1,5730816,"INDEL","GC","G","frameshift_variant","Vradi01g03620","putative ABC transporter B family member 8","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[1,5730824,"INDEL","AAC","A","frameshift_variant","Vradi01g03620","putative ABC transporter B family member 8","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[1,5730832,"INDEL","GGATAAGACTGCGCATGCTGGAGAATATC","G","frameshift_variant","Vradi01g03620","putative ABC transporter B family member 8","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[1,5731276,"INDEL","C","CTTAGAA","stop_gained","Vradi01g03620","putative ABC transporter B family member 8","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[1,5759727,"SNP","C","T","stop_gained","Vradi01g03650","SNW/SKI-interacting protein","mRNA splicing, via spliceosome [GO:0000398]","spliceosomal complex [GO:0005681]","-","spliceosomal complex [GO:0005681]; mRNA splicing, via spliceosome [GO:0000398]"]
[1,5840414,"INDEL","TA","T","frameshift_variant","Vradi01g03710","uncharacterized protein LOC106771672 isoform X2","-","-","-","-"]
[1,5840748,"SNP","G","C","splice_donor_variant","Vradi01g03710","uncharacterized protein LOC106771672 isoform X2","-","-","-","-"]
[1,6162691,"SNP","G","T","splice_donor_variant","Vradi01g03890","uncharacterized protein LOC106772149 isoform X1","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","metal ion binding [GO:0046872]; RNA binding [GO:0003723]","nucleus [GO:0005634]; metal ion binding [GO:0046872]; RNA binding [GO:0003723]; regulation of transcription, DNA-templated [GO:0006355]"]
[1,6189301,"INDEL","TG","T","frameshift_variant","Vradi01g03930","AUGMIN subunit 1","cell division [GO:0051301]; spindle assembly [GO:0051225]","cytoplasm [GO:0005737]; HAUS complex [GO:0070652]; microtubule [GO:0005874]","-","cytoplasm [GO:0005737]; HAUS complex [GO:0070652]; microtubule [GO:0005874]; cell division [GO:0051301]; spindle assembly [GO:0051225]"]
[1,6189492,"INDEL","T","TA","frameshift_variant","Vradi01g03930","AUGMIN subunit 1","cell division [GO:0051301]; spindle assembly [GO:0051225]","cytoplasm [GO:0005737]; HAUS complex [GO:0070652]; microtubule [GO:0005874]","-","cytoplasm [GO:0005737]; HAUS complex [GO:0070652]; microtubule [GO:0005874]; cell division [GO:0051301]; spindle assembly [GO:0051225]"]
[1,6216024,"INDEL","A","AGAGGG","frameshift_variant","Vradi01g03970","-","-","-","-","-"]
[1,6216036,"INDEL","GAA","G","frameshift_variant","Vradi01g03970","-","-","-","-","-"]
[1,6349653,"INDEL","CTCTCTCTA","C","frameshift_variant","Vradi01g04060","-","-","-","-","-"]
[1,6349864,"INDEL","TTC","T","frameshift_variant","Vradi01g04050","uncharacterized protein LOC106773619 isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[1,6349939,"SNP","C","T","stop_gained","Vradi01g04050","uncharacterized protein LOC106773619 isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[1,6514511,"INDEL","T","TA","frameshift_variant","Vradi01g04210","DNA mismatch repair protein MSH7","mismatch repair [GO:0006298]","-","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[1,6514586,"INDEL","AG","A","frameshift_variant","Vradi01g04210","DNA mismatch repair protein MSH7","mismatch repair [GO:0006298]","-","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[1,6523136,"INDEL","G","GAT","frameshift_variant","Vradi01g04210","DNA mismatch repair protein MSH7","mismatch repair [GO:0006298]","-","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[1,6532375,"INDEL","TC","T","frameshift_variant","Vradi01g04230","trihelix transcription factor ASIL2","-","-","-","-"]
[1,6628665,"INDEL","CG","C","frameshift_variant","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6628674,"INDEL","TCTTA","T","frameshift_variant","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6628805,"INDEL","G","GCT","frameshift_variant","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6628808,"INDEL","ACG","A","frameshift_variant","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6628825,"INDEL","AC","A","frameshift_variant","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6628860,"SNP","C","A","stop_gained","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6628927,"SNP","C","T","stop_gained","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6629087,"INDEL","AG","A","frameshift_variant","Vradi01g04280","uncharacterized protein LOC106758158","-","-","-","-"]
[1,6644748,"INDEL","AG","A","splice_acceptor_variant","Vradi01g04290","VIN3-like protein 1 isoform X1","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[1,6703974,"SNP","C","T","splice_acceptor_variant","Vradi01g04330","Mediator of RNA polymerase II transcription subunit 25","-","-","-","-"]
[1,6705739,"SNP","G","A","stop_gained","Vradi01g04330","Mediator of RNA polymerase II transcription subunit 25","-","-","-","-"]
[1,6705972,"INDEL","ATATACCAGTAGAGCTTCTGCAAGACCTTTCACCATGGTGTGTTGGTTTTCATTATTTCCATTGAAAATCAATGATGATAACACACTTAAAAAACTATCCACCTCTCTTGTCCAAGGGATATATTGAACGTCCAACCC","A","exon_loss_variant","Vradi01g04330","Mediator of RNA polymerase II transcription subunit 25","-","-","-","-"]
[1,6713269,"SNP","G","A","stop_gained","Vradi01g04330","Mediator of RNA polymerase II transcription subunit 25","-","-","-","-"]
[1,6713659,"INDEL","TGC","T","frameshift_variant","Vradi01g04330","Mediator of RNA polymerase II transcription subunit 25","-","-","-","-"]
[1,6713667,"INDEL","C","CTA","frameshift_variant","Vradi01g04330","Mediator of RNA polymerase II transcription subunit 25","-","-","-","-"]
[1,6728080,"SNP","T","A","stop_gained","Vradi01g04350","ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2","protein catabolic process [GO:0030163]","-","peptidase activity [GO:0008233]","peptidase activity [GO:0008233]; protein catabolic process [GO:0030163]"]
[1,6748689,"SNP","T","C","splice_donor_variant","Vradi01g04370","Protein CASP","intra-Golgi vesicle-mediated transport [GO:0006891]","integral component of Golgi membrane [GO:0030173]","-","integral component of Golgi membrane [GO:0030173]; intra-Golgi vesicle-mediated transport [GO:0006891]"]
[1,6758735,"INDEL","G","GC","frameshift_variant","Vradi01g04390","probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase","sterol metabolic process [GO:0016125]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","cholestenol delta-isomerase activity [GO:0047750]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; cholestenol delta-isomerase activity [GO:0047750]; sterol metabolic process [GO:0016125]"]
[1,6825338,"INDEL","CAG","C","frameshift_variant","Vradi01g04400","-","-","-","-","-"]
[1,6844836,"INDEL","GGAAA","G","frameshift_variant","Vradi01g04420","cell number regulator 4-like","-","-","-","-"]
[1,6862791,"SNP","G","A","splice_donor_variant","Vradi01g04440","lysine-specific histone demethylase 1 homolog 1","chromatin organization [GO:0006325]; methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]; oxidoreductase activity [GO:0016491]","methyltransferase activity [GO:0008168]; oxidoreductase activity [GO:0016491]; chromatin organization [GO:0006325]; methylation [GO:0032259]"]
[1,6887949,"SNP","T","G","splice_donor_variant","Vradi01g04470","dehydrin DHN3","-","-","-","-"]
[1,6960996,"SNP","T","A","stop_gained","Vradi01g04540","carbon catabolite repressor protein 4 homolog 5 isoform X1","-","-","-","-"]
[1,6961964,"INDEL","T","TC","frameshift_variant","Vradi01g04540","carbon catabolite repressor protein 4 homolog 5 isoform X1","-","-","-","-"]
[1,6962110,"INDEL","TG","T","frameshift_variant","Vradi01g04540","carbon catabolite repressor protein 4 homolog 5 isoform X1","-","-","-","-"]
[1,7037932,"INDEL","C","CA","frameshift_variant","Vradi01g04620","CRM-domain containing factor CFM3, chloroplastic/mitochondrial isoform X2","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,7040776,"INDEL","TTTTCACTTTTCAGTCATGGCGTATGAAGA","T","frameshift_variant&splice_donor_variant","Vradi01g04630","synaptotagmin-5","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[1,7169419,"INDEL","GCAGTATGTTTTCTTACCCCTGTTATATATTTGTC","G","frameshift_variant&stop_lost","Vradi01g04760","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.7","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[1,7176560,"INDEL","T","TGA","frameshift_variant","Vradi01g04770","-","-","-","-","-"]
[1,7329532,"SNP","T","C","stop_lost","Vradi01g04780","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[1,7345440,"INDEL","ATTCG","A","frameshift_variant","Vradi01g04780","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[1,7345445,"INDEL","C","CTAAG","frameshift_variant","Vradi01g04780","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[1,7372741,"SNP","C","T","splice_donor_variant","Vradi01g04790","uncharacterized protein LOC106774032","-","-","-","-"]
[1,7403133,"SNP","T","C","splice_donor_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7403711,"INDEL","A","ATG","frameshift_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7403714,"INDEL","C","CT","frameshift_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7403867,"INDEL","A","ACT","frameshift_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7403874,"INDEL","ACC","A","frameshift_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7403877,"INDEL","TAGCG","T","frameshift_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7403882,"SNP","A","C","splice_acceptor_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7404140,"INDEL","G","GAATCT","frameshift_variant","Vradi01g04820","Chlorophyllase (EC 3.1.1.14)","chlorophyll catabolic process [GO:0015996]","-","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]","chlorophyllase activity [GO:0047746]; pheophytinase b activity [GO:0102293]; chlorophyll catabolic process [GO:0015996]"]
[1,7518815,"INDEL","TCG","T","frameshift_variant","Vradi01g04850","uncharacterized protein LOC106773804","-","-","-","-"]
[1,7720666,"INDEL","A","ACTTC","frameshift_variant","Vradi01g04960","-","-","-","-","-"]
[1,7723030,"SNP","A","G","start_lost","Vradi01g04970","protein DETOXIFICATION 2-like","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,7723140,"INDEL","G","GT","frameshift_variant","Vradi01g04970","protein DETOXIFICATION 2-like","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,7724786,"INDEL","TG","T","frameshift_variant","Vradi01g04970","protein DETOXIFICATION 2-like","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,7724789,"INDEL","A","AT","frameshift_variant&stop_gained","Vradi01g04970","protein DETOXIFICATION 2-like","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,7746335,"INDEL","TTGGG","T","frameshift_variant","Vradi01g04980","protein DETOXIFICATION 16-like","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,7746349,"INDEL","T","TA","frameshift_variant","Vradi01g04980","protein DETOXIFICATION 16-like","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,7747754,"INDEL","T","TA","frameshift_variant","Vradi01g04980","protein DETOXIFICATION 16-like","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,7810882,"SNP","T","G","splice_acceptor_variant","Vradi01g05040","receptor for activated C kinase 1C-like","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[1,7810983,"SNP","G","T","stop_lost","Vradi01g05040","receptor for activated C kinase 1C-like","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[1,7863330,"SNP","G","T","stop_gained","Vradi01g05070","probable calcium-binding protein CML27","-","-","calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]"]
[1,7884596,"SNP","T","A","splice_acceptor_variant","Vradi01g05090","probable serine/threonine-protein kinase SIS8 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[1,7899044,"INDEL","C","CT","splice_acceptor_variant","Vradi01g05100","-","-","-","-","-"]
[1,7925217,"INDEL","AG","A","frameshift_variant","Vradi01g05110","Mitogen-activated protein kinase (EC 2.7.11.24)","-","-","ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[1,7925263,"SNP","A","T","stop_gained","Vradi01g05110","Mitogen-activated protein kinase (EC 2.7.11.24)","-","-","ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[1,8070697,"SNP","C","T","splice_donor_variant","Vradi01g05240","Peptide deformylase (EC 3.5.1.88)","translation [GO:0006412]","chloroplast [GO:0009507]","metal ion binding [GO:0046872]; peptide deformylase activity [GO:0042586]","chloroplast [GO:0009507]; metal ion binding [GO:0046872]; peptide deformylase activity [GO:0042586]; translation [GO:0006412]"]
[1,8075773,"INDEL","ATGCAACTTTAAAATGAC","A","frameshift_variant&stop_lost","Vradi01g05250","SURF1-like protein","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]"]
[1,8223276,"SNP","C","A","stop_gained","Vradi01g05340","glutamine synthetase PR-2-like","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[1,8387911,"SNP","A","C","splice_donor_variant","Vradi01g05480","transcription termination factor MTERF5, chloroplastic","DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]","-","double-stranded DNA binding [GO:0003690]","double-stranded DNA binding [GO:0003690]; DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]"]
[1,8387938,"INDEL","C","CT","frameshift_variant","Vradi01g05480","transcription termination factor MTERF5, chloroplastic","DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]","-","double-stranded DNA binding [GO:0003690]","double-stranded DNA binding [GO:0003690]; DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]"]
[1,8387964,"SNP","T","C","splice_acceptor_variant","Vradi01g05480","transcription termination factor MTERF5, chloroplastic","DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]","-","double-stranded DNA binding [GO:0003690]","double-stranded DNA binding [GO:0003690]; DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]"]
[1,8472214,"SNP","G","T","stop_gained","Vradi01g05550","putative 3,4-dihydroxy-2-butanone kinase","glycerol metabolic process [GO:0006071]","-","ATP binding [GO:0005524]; glycerone kinase activity [GO:0004371]","ATP binding [GO:0005524]; glycerone kinase activity [GO:0004371]; glycerol metabolic process [GO:0006071]"]
[1,8472686,"SNP","T","G","stop_gained","Vradi01g05550","putative 3,4-dihydroxy-2-butanone kinase","glycerol metabolic process [GO:0006071]","-","ATP binding [GO:0005524]; glycerone kinase activity [GO:0004371]","ATP binding [GO:0005524]; glycerone kinase activity [GO:0004371]; glycerol metabolic process [GO:0006071]"]
[1,8472740,"INDEL","TAGCCGGGGCTCAGTCAACTGTAGACATGCAAGCACAGGTAGACTGCCTATTAATTGTTTA","T","frameshift_variant&splice_donor_variant","Vradi01g05550","putative 3,4-dihydroxy-2-butanone kinase","glycerol metabolic process [GO:0006071]","-","ATP binding [GO:0005524]; glycerone kinase activity [GO:0004371]","ATP binding [GO:0005524]; glycerone kinase activity [GO:0004371]; glycerol metabolic process [GO:0006071]"]
[1,8650686,"INDEL","TAAAAAAA","T","frameshift_variant&stop_lost","Vradi01g05630","uncharacterized protein At1g24485-like","-","-","-","-"]
[1,8672165,"INDEL","AT","A","frameshift_variant","Vradi01g05650","uncharacterized protein LOC106770507","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[1,8711833,"INDEL","GA","G","frameshift_variant","Vradi01g05680","Protein-S-isoprenylcysteine O-methyltransferase (EC 2.1.1.100)","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity [GO:0004671]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity [GO:0004671]"]
[1,8716298,"SNP","A","T","splice_acceptor_variant","Vradi01g05690","DNA polymerase epsilon subunit (DNA polymerase II subunit 2)","DNA-dependent DNA replication [GO:0006261]","epsilon DNA polymerase complex [GO:0008622]","DNA binding [GO:0003677]","epsilon DNA polymerase complex [GO:0008622]; DNA binding [GO:0003677]; DNA-dependent DNA replication [GO:0006261]"]
[1,8731991,"INDEL","AGATAAATGTCC","A","frameshift_variant&stop_lost","Vradi01g05720","uncharacterized protein LOC106766685","-","-","-","-"]
[1,8732093,"INDEL","CTTCAGTTAAATAAT","C","frameshift_variant","Vradi01g05720","uncharacterized protein LOC106766685","-","-","-","-"]
[1,8748777,"SNP","C","A","stop_gained","Vradi01g05730","Glutamate decarboxylase (EC 4.1.1.15)","glutamate metabolic process [GO:0006536]","-","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]; glutamate metabolic process [GO:0006536]"]
[1,9007226,"INDEL","CAAGTT","C","frameshift_variant","Vradi01g05850","kinase-interacting family protein isoform X2","-","-","actin binding [GO:0003779]; kinase activity [GO:0016301]","actin binding [GO:0003779]; kinase activity [GO:0016301]"]
[1,9013365,"INDEL","T","TA","frameshift_variant","Vradi01g05870","retinol dehydrogenase 12 isoform X1","-","-","-","-"]
[1,9330989,"INDEL","GAAGCCATAATTGAGGGGACAATTCCACTGTAATCCTTAAT","G","frameshift_variant","Vradi01g05980","Dolichyl-diphosphooligosaccharide--protein glycotransferase (EC 2.4.99.18)","protein glycosylation [GO:0006486]","integral component of membrane [GO:0016021]","dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]; protein glycosylation [GO:0006486]"]
[1,9434291,"SNP","A","T","start_lost","Vradi01g06030","DNA-directed RNA polymerases II, IV and V subunit 12","transcription, DNA-templated [GO:0006351]","-","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]; zinc ion binding [GO:0008270]","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]; zinc ion binding [GO:0008270]; transcription, DNA-templated [GO:0006351]"]
[1,9481011,"INDEL","AC","A","frameshift_variant","Vradi01g06080","-","-","-","-","-"]
[1,9503497,"INDEL","CACAAGGTCTCAG","CTTACAAGGTCTCAG","frameshift_variant&stop_gained","Vradi01g06100","UDP-glycosyltransferase 708D1-like isoform X1 (UDP-glycosyltransferase 708D1-like isoform X3)","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[1,9503500,"INDEL","AAG","A","frameshift_variant","Vradi01g06100","UDP-glycosyltransferase 708D1-like isoform X1 (UDP-glycosyltransferase 708D1-like isoform X3)","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[1,9514900,"SNP","A","G","splice_donor_variant","Vradi01g06110","receptor protein kinase TMK1-like","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[1,9564629,"INDEL","TG","T","frameshift_variant","Vradi01g06150","uncharacterized protein LOC106769815","-","-","-","-"]
[1,9893676,"SNP","A","T","start_lost","Vradi01g06330","TMV resistance protein N","defense response [GO:0006952]; signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; defense response [GO:0006952]; signal transduction [GO:0007165]"]
[1,9908267,"INDEL","GA","GAA","frameshift_variant","Vradi01g06340","uncharacterized protein LOC106757217","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,10461971,"SNP","G","T","stop_gained","Vradi01g06760","uncharacterized protein LOC106771985 isoform X2","-","-","-","-"]
[1,10462007,"SNP","C","T","stop_gained","Vradi01g06760","uncharacterized protein LOC106771985 isoform X2","-","-","-","-"]
[1,11041051,"INDEL","AG","A","frameshift_variant","Vradi01g07100","uncharacterized protein LOC106767132","-","-","-","-"]
[1,11041327,"INDEL","G","GC","frameshift_variant","Vradi01g07100","uncharacterized protein LOC106767132","-","-","-","-"]
[1,11043144,"INDEL","ATG","A","frameshift_variant&start_lost","Vradi01g07100","uncharacterized protein LOC106767132","-","-","-","-"]
[1,11090371,"SNP","C","T","splice_acceptor_variant","Vradi01g07110","zinc finger CCCH domain-containing protein 48","-","-","DNA binding [GO:0003677]; metal ion binding [GO:0046872]","DNA binding [GO:0003677]; metal ion binding [GO:0046872]"]
[1,11121472,"SNP","C","A","splice_donor_variant","Vradi01g07140","ABC transporter B family member 28","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[1,11149004,"INDEL","CCACCATCAACCTTGCGTCAACCGCCGCAAAATGCA","C","frameshift_variant&stop_lost","Vradi01g07160","dehydration-responsive element-binding protein 1D","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,11149062,"INDEL","CA","C","frameshift_variant","Vradi01g07160","dehydration-responsive element-binding protein 1D","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,11149067,"INDEL","AT","A","frameshift_variant","Vradi01g07160","dehydration-responsive element-binding protein 1D","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,11149069,"INDEL","A","ACC","frameshift_variant&stop_gained","Vradi01g07160","dehydration-responsive element-binding protein 1D","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,11149087,"INDEL","A","AC","frameshift_variant","Vradi01g07160","dehydration-responsive element-binding protein 1D","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,11149094,"INDEL","CCA","C","frameshift_variant","Vradi01g07160","dehydration-responsive element-binding protein 1D","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,11149110,"SNP","G","A","stop_gained","Vradi01g07160","dehydration-responsive element-binding protein 1D","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,11281243,"SNP","C","T","splice_donor_variant","Vradi01g07190","protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic","-","-","-","-"]
[1,11439677,"INDEL","AAC","A","frameshift_variant","Vradi01g07260","uncharacterized protein LOC111242278","-","-","-","-"]
[1,11446605,"INDEL","T","TAA","frameshift_variant","Vradi01g07270","-","-","-","-","-"]
[1,11452642,"INDEL","TA","T","frameshift_variant","Vradi01g07260","uncharacterized protein LOC111242278","-","-","-","-"]
[1,11452644,"INDEL","C","CT","frameshift_variant","Vradi01g07260","uncharacterized protein LOC111242278","-","-","-","-"]
[1,11494236,"INDEL","A","AAT","frameshift_variant","Vradi01g07280","uncharacterized protein LOC106766450","-","-","-","-"]
[1,11494238,"INDEL","TGC","T","frameshift_variant","Vradi01g07280","uncharacterized protein LOC106766450","-","-","-","-"]
[1,11784499,"INDEL","A","AC","frameshift_variant","Vradi01g07370","ATP-citrate synthase beta chain protein 1-like isoform X1","-","-","transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer [GO:0046912]","transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer [GO:0046912]"]
[1,11911156,"INDEL","ACAAC","A","frameshift_variant","tRNA-Asn","-","-","-","-","-"]
[1,11911166,"INDEL","AGTTAACAACCGACCGCTCTACC","A","frameshift_variant&stop_lost","tRNA-Asn","-","-","-","-","-"]
[1,11911191,"INDEL","TGAGCTACTAAGGAGTAACGGG","T","frameshift_variant","tRNA-Asn","-","-","-","-","-"]
[1,11925832,"SNP","C","T","splice_donor_variant","Vradi01g07480","Membrane-anchored ubiquitin-fold protein","-","plasma membrane [GO:0005886]","-","plasma membrane [GO:0005886]"]
[1,11992769,"SNP","T","C","start_lost","Vradi01g07500","uncharacterized protein LOC106762452 isoform X3","-","integral component of membrane [GO:0016021]","metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; metal ion binding [GO:0046872]"]
[1,12034056,"INDEL","TGACAACCTACGATTTACTTAATTTATGGAAGGTTCAGGTATTGTGACACAAGATTTATAGATAAAAGAAACCTGTAATCAGACACCATTACGAAATTGATATTTTGAAATCATTGAAAATAATATTAGTTGTCAGTTAAGAGATAAA","TATTTACTTAATTTATGGAAGGTTCAGGTATTGTGACACAAGATTTATAGATAAAAGAAACCTGTAATCAGACACCATTACGAAATTGATATTTTGAAATCATTGAAAATAATATTAGTTGTCAGTTAAGAGATAAA","frameshift_variant&start_lost","Vradi01g07530","-","-","-","-","-"]
[1,12034084,"INDEL","GAAGGTTCAGGTATTGTGACACAAGATTTATAGATAAAAGAAACCTGTAATCAGACACCATTACGAAATTGATATTTTGAAATCATTGAAAATAATATTAGTTGTCAGTTAAGAGATA","G","splice_donor_variant","Vradi01g07530","-","-","-","-","-"]
[1,12062569,"INDEL","ACT","A","frameshift_variant","Vradi01g07560","chaperone protein ClpB3, chloroplastic isoform X2","protein refolding [GO:0042026]; response to heat [GO:0009408]","cytoplasm [GO:0005737]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; protein refolding [GO:0042026]; response to heat [GO:0009408]"]
[1,12103599,"SNP","C","T","stop_gained","Vradi01g07590","Chorismate mutase (EC 5.4.99.5)","aromatic amino acid family biosynthetic process [GO:0009073]; cellular amino acid biosynthetic process [GO:0008652]; chorismate metabolic process [GO:0046417]","-","chorismate mutase activity [GO:0004106]","chorismate mutase activity [GO:0004106]; aromatic amino acid family biosynthetic process [GO:0009073]; cellular amino acid biosynthetic process [GO:0008652]; chorismate metabolic process [GO:0046417]"]
[1,12262200,"INDEL","T","TAA","frameshift_variant&stop_lost","Vradi01g07720","-","-","-","-","-"]
[1,12267785,"INDEL","AG","A","frameshift_variant","Vradi01g07720","-","-","-","-","-"]
[1,12635631,"SNP","G","A","splice_donor_variant","Vradi01g07850","probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[1,12676123,"INDEL","AC","A","frameshift_variant","Vradi01g07860","EVI5-like protein","-","-","-","-"]
[1,12698248,"SNP","T","A","start_lost","Vradi01g07870","-","-","-","-","-"]
[1,12698305,"INDEL","T","TG","frameshift_variant","Vradi01g07870","-","-","-","-","-"]
[1,12699145,"SNP","G","T","stop_gained","Vradi01g07870","-","-","-","-","-"]
[1,12701212,"INDEL","TTACAATATAATA","T","splice_acceptor_variant&splice_donor_variant","Vradi01g07870","-","-","-","-","-"]
[1,12755889,"SNP","A","G","stop_lost","Vradi01g07890","-","-","-","-","-"]
[1,12756060,"SNP","G","A","stop_gained","Vradi01g07890","-","-","-","-","-"]
[1,12789333,"SNP","C","T","stop_gained","Vradi01g07900","protein YIF1B-A","endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]","endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-","endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]"]
[1,12789337,"INDEL","TGA","T","frameshift_variant","Vradi01g07900","protein YIF1B-A","endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]","endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-","endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]"]
[1,12789340,"INDEL","CAGTAA","C","frameshift_variant","Vradi01g07900","protein YIF1B-A","endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]","endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-","endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]"]
[1,12940281,"SNP","T","C","stop_lost","Vradi01g08010","20S-pre-rRNA D-site endonuclease nob1-like","-","-","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]"]
[1,12940311,"SNP","C","T","stop_gained","Vradi01g08010","20S-pre-rRNA D-site endonuclease nob1-like","-","-","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]"]
[1,13149475,"INDEL","ATGCAGG","A","frameshift_variant&splice_acceptor_variant","Vradi01g08080","cleavage stimulation factor subunit 77 isoform X3","mRNA processing [GO:0006397]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; mRNA processing [GO:0006397]"]
[1,13218013,"SNP","C","T","stop_gained","Vradi01g08110","double-stranded RNA-binding protein 1-like","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,13233338,"INDEL","TG","T","frameshift_variant","Vradi01g08120","annexin A13","-","-","calcium-dependent phospholipid binding [GO:0005544]; calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]"]
[1,13233341,"INDEL","G","GA","frameshift_variant","Vradi01g08120","annexin A13","-","-","calcium-dependent phospholipid binding [GO:0005544]; calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]"]
[1,13265815,"INDEL","TATAAAACACACTATATTACCTGAGAAAATAAATTAGAAAGTATGTTAGGGGA","T","exon_loss_variant","Vradi01g08140","flavonol synthase/flavanone 3-hydroxylase-like","-","-","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]"]
[1,13610969,"INDEL","A","AG","frameshift_variant","Vradi01g08280","-","-","-","-","-"]
[1,13939010,"SNP","G","A","stop_gained","Vradi01g08380","-","-","-","-","-"]
[1,13939650,"SNP","G","A","stop_gained","Vradi01g08380","-","-","-","-","-"]
[1,13939679,"INDEL","T","TGA","frameshift_variant","Vradi01g08380","-","-","-","-","-"]
[1,13939782,"INDEL","AT","A","frameshift_variant","Vradi01g08380","-","-","-","-","-"]
[1,14330138,"SNP","G","A","splice_donor_variant","Vradi01g08570","Phosphoglycerate kinase (EC 2.7.2.3)","glycolytic process [GO:0006096]","-","ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]; tRNA (guanine-N7-)-methyltransferase activity [GO:0008176]","ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]; tRNA (guanine-N7-)-methyltransferase activity [GO:0008176]; glycolytic process [GO:0006096]"]
[1,14330157,"INDEL","AT","A","frameshift_variant","Vradi01g08570","Phosphoglycerate kinase (EC 2.7.2.3)","glycolytic process [GO:0006096]","-","ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]; tRNA (guanine-N7-)-methyltransferase activity [GO:0008176]","ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]; tRNA (guanine-N7-)-methyltransferase activity [GO:0008176]; glycolytic process [GO:0006096]"]
[1,14531153,"INDEL","A","AATGTG","frameshift_variant","Vradi01g08630","uncharacterized protein LOC106765647","-","-","-","-"]
[1,14531188,"SNP","C","T","stop_gained","Vradi01g08630","uncharacterized protein LOC106765647","-","-","-","-"]
[1,14836599,"SNP","A","G","splice_donor_variant","Vradi01g08760","FH protein interacting protein FIP2 isoform X1","protein homooligomerization [GO:0051260]","-","-","protein homooligomerization [GO:0051260]"]
[1,14916768,"INDEL","C","CG","frameshift_variant","Vradi01g08800","-","-","-","-","-"]
[1,14937726,"INDEL","CT","C","frameshift_variant","Vradi01g08810","Carboxypeptidase (EC 3.4.16.-)","-","extracellular region [GO:0005576]","serine-type carboxypeptidase activity [GO:0004185]","extracellular region [GO:0005576]; serine-type carboxypeptidase activity [GO:0004185]"]
[1,15158503,"INDEL","GT","G","frameshift_variant","Vradi01g08890","lipid transfer-like protein VAS","lipid transport [GO:0006869]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]","lipid binding [GO:0008289]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]; lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[1,15158549,"SNP","G","T","stop_gained","Vradi01g08890","lipid transfer-like protein VAS","lipid transport [GO:0006869]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]","lipid binding [GO:0008289]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]; lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[1,15158624,"INDEL","G","GGAAGGCAA","frameshift_variant","Vradi01g08890","lipid transfer-like protein VAS","lipid transport [GO:0006869]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]","lipid binding [GO:0008289]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]; lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[1,15158629,"INDEL","GCC","G","frameshift_variant","Vradi01g08890","lipid transfer-like protein VAS","lipid transport [GO:0006869]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]","lipid binding [GO:0008289]","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]; lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[1,15167773,"INDEL","ATACAGG","A","frameshift_variant&splice_donor_variant","Vradi01g08900","uncharacterized protein LOC111241953","-","-","-","-"]
[1,15169995,"SNP","G","A","splice_acceptor_variant","Vradi01g08900","uncharacterized protein LOC111241953","-","-","-","-"]
[1,15452407,"INDEL","AGC","A","frameshift_variant","Vradi01g08960","Probable magnesium transporter","-","early endosome [GO:0005769]; integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","magnesium ion transmembrane transporter activity [GO:0015095]","early endosome [GO:0005769]; integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; magnesium ion transmembrane transporter activity [GO:0015095]"]
[1,15643664,"INDEL","T","TAACA","frameshift_variant","Vradi01g09040","ATPase family AAA domain-containing protein FIGL1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[1,15717968,"INDEL","T","TC","frameshift_variant","Vradi01g09080","AUGMIN subunit 6-like isoform X2","spindle assembly [GO:0051225]","HAUS complex [GO:0070652]","-","HAUS complex [GO:0070652]; spindle assembly [GO:0051225]"]
[1,15721374,"SNP","G","A","splice_donor_variant","Vradi01g09080","AUGMIN subunit 6-like isoform X2","spindle assembly [GO:0051225]","HAUS complex [GO:0070652]","-","HAUS complex [GO:0070652]; spindle assembly [GO:0051225]"]
[1,15725568,"INDEL","A","AC","frameshift_variant","Vradi01g09080","AUGMIN subunit 6-like isoform X2","spindle assembly [GO:0051225]","HAUS complex [GO:0070652]","-","HAUS complex [GO:0070652]; spindle assembly [GO:0051225]"]
[1,16270639,"INDEL","C","CT","frameshift_variant","Vradi01g09210","MLO-like protein","defense response [GO:0006952]; response to biotic stimulus [GO:0009607]","integral component of membrane [GO:0016021]","calmodulin binding [GO:0005516]","integral component of membrane [GO:0016021]; calmodulin binding [GO:0005516]; defense response [GO:0006952]; response to biotic stimulus [GO:0009607]"]
[1,16270792,"INDEL","A","AGC","frameshift_variant","Vradi01g09210","MLO-like protein","defense response [GO:0006952]; response to biotic stimulus [GO:0009607]","integral component of membrane [GO:0016021]","calmodulin binding [GO:0005516]","integral component of membrane [GO:0016021]; calmodulin binding [GO:0005516]; defense response [GO:0006952]; response to biotic stimulus [GO:0009607]"]
[1,16270794,"INDEL","*","CGATTTCTGTTGTTGTTGGGCATATTGTTCCACCCGCTATCAAACTGCTATTAGACCATCCATTAAAAAGTCTAATCCCACGCTTGAAATGTATATACCT","frameshift_variant","Vradi01g09210","MLO-like protein","defense response [GO:0006952]; response to biotic stimulus [GO:0009607]","integral component of membrane [GO:0016021]","calmodulin binding [GO:0005516]","integral component of membrane [GO:0016021]; calmodulin binding [GO:0005516]; defense response [GO:0006952]; response to biotic stimulus [GO:0009607]"]
[1,16270796,"INDEL","A","ATTTCTGTTGTTGTTGGGCATATTGTTCCACCCGCTATCAAACTGCTATTAGACCATCCATTAAAAAGTCTAATCCCACGCTTGAAATGTATATACCT","frameshift_variant","Vradi01g09210","MLO-like protein","defense response [GO:0006952]; response to biotic stimulus [GO:0009607]","integral component of membrane [GO:0016021]","calmodulin binding [GO:0005516]","integral component of membrane [GO:0016021]; calmodulin binding [GO:0005516]; defense response [GO:0006952]; response to biotic stimulus [GO:0009607]"]
[1,16279786,"SNP","A","G","start_lost","Vradi01g09220","-","-","-","-","-"]
[1,16341001,"SNP","C","T","splice_acceptor_variant","Vradi01g09250","rhomboid-like protein 19","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]"]
[1,16342403,"INDEL","T","TA","frameshift_variant","Vradi01g09250","rhomboid-like protein 19","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]"]
[1,16342411,"INDEL","TC","T","frameshift_variant","Vradi01g09250","rhomboid-like protein 19","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]"]
[1,16345162,"SNP","A","C","splice_donor_variant","Vradi01g09250","rhomboid-like protein 19","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]"]
[1,16425927,"INDEL","A","AT","frameshift_variant","Vradi01g09300","-","-","-","-","-"]
[1,16454950,"SNP","G","A","stop_gained","Vradi01g09320","uncharacterized protein LOC106774118 isoform X1","-","-","-","-"]
[1,16604044,"INDEL","T","TC","frameshift_variant","Vradi01g09390","-","-","-","-","-"]
[1,16604215,"INDEL","GGCATAAGCAAACCTA","G","frameshift_variant&splice_donor_variant","Vradi01g09390","-","-","-","-","-"]
[1,16604218,"INDEL","ACCTGTAAGGACAAAGTAAGCAAATGCCCTCTTGCTAGGGTCACC","A","frameshift_variant&splice_donor_variant","Vradi01g09390","-","-","-","-","-"]
[1,16661931,"SNP","A","G","splice_donor_variant","Vradi01g09400","ethylene-responsive transcription factor ERF113","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[1,17135538,"SNP","T","C","splice_donor_variant","Vradi01g09540","-","-","-","-","-"]
[1,17275381,"SNP","C","A","stop_gained","Vradi01g09580","fatty alcohol:caffeoyl-CoA acyltransferase isoform X2","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[1,17442715,"INDEL","TCAACGTC","T","frameshift_variant","Vradi01g09620","syntaxin-related protein KNOLLE","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]","integral component of membrane [GO:0016021]; SNAP receptor activity [GO:0005484]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[1,17442725,"INDEL","TC","T","frameshift_variant","Vradi01g09620","syntaxin-related protein KNOLLE","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]","integral component of membrane [GO:0016021]; SNAP receptor activity [GO:0005484]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[1,17442747,"INDEL","C","CACCTA","frameshift_variant","Vradi01g09620","syntaxin-related protein KNOLLE","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]","integral component of membrane [GO:0016021]; SNAP receptor activity [GO:0005484]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[1,17442750,"SNP","G","C","stop_gained","Vradi01g09620","syntaxin-related protein KNOLLE","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]","integral component of membrane [GO:0016021]; SNAP receptor activity [GO:0005484]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[1,17956412,"INDEL","A","AG","frameshift_variant","Vradi01g09730","-","-","-","-","-"]
[1,18183798,"SNP","T","A","stop_gained","Vradi01g09800","putative disease resistance RPP13-like protein 1","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[1,18580561,"INDEL","A","AT","frameshift_variant","Vradi01g09820","sucrose transport protein SUC8","sucrose metabolic process [GO:0005985]","integral component of plasma membrane [GO:0005887]","sucrose transmembrane transporter activity [GO:0008515]","integral component of plasma membrane [GO:0005887]; sucrose transmembrane transporter activity [GO:0008515]; sucrose metabolic process [GO:0005985]"]
[1,18580565,"INDEL","AG","A","frameshift_variant","Vradi01g09820","sucrose transport protein SUC8","sucrose metabolic process [GO:0005985]","integral component of plasma membrane [GO:0005887]","sucrose transmembrane transporter activity [GO:0008515]","integral component of plasma membrane [GO:0005887]; sucrose transmembrane transporter activity [GO:0008515]; sucrose metabolic process [GO:0005985]"]
[1,18580724,"INDEL","ATG","A","frameshift_variant","Vradi01g09820","sucrose transport protein SUC8","sucrose metabolic process [GO:0005985]","integral component of plasma membrane [GO:0005887]","sucrose transmembrane transporter activity [GO:0008515]","integral component of plasma membrane [GO:0005887]; sucrose transmembrane transporter activity [GO:0008515]; sucrose metabolic process [GO:0005985]"]
[1,18580727,"INDEL","C","CTT","frameshift_variant","Vradi01g09820","sucrose transport protein SUC8","sucrose metabolic process [GO:0005985]","integral component of plasma membrane [GO:0005887]","sucrose transmembrane transporter activity [GO:0008515]","integral component of plasma membrane [GO:0005887]; sucrose transmembrane transporter activity [GO:0008515]; sucrose metabolic process [GO:0005985]"]
[1,18704464,"SNP","G","T","stop_gained","Vradi01g09850","-","-","-","-","-"]
[1,18709336,"SNP","A","G","splice_acceptor_variant","Vradi01g09850","-","-","-","-","-"]
[1,18893773,"INDEL","C","CACAACTA","frameshift_variant","Vradi01g09900","-","-","-","-","-"]
[1,19076638,"INDEL","GTAGGCGACAACATCGTCTA","G","frameshift_variant&splice_acceptor_variant","Vradi01g09940","replication factor C subunit 3","DNA replication [GO:0006260]","-","DNA binding [GO:0003677]","DNA binding [GO:0003677]; DNA replication [GO:0006260]"]
[1,19076855,"SNP","A","G","splice_acceptor_variant","Vradi01g09940","replication factor C subunit 3","DNA replication [GO:0006260]","-","DNA binding [GO:0003677]","DNA binding [GO:0003677]; DNA replication [GO:0006260]"]
[1,19485397,"INDEL","C","CAACAGAAAGTGGAAGGACG","frameshift_variant","Vradi01g10100","protein NUCLEAR FUSION DEFECTIVE 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,19485415,"SNP","*","C","frameshift_variant","Vradi01g10100","protein NUCLEAR FUSION DEFECTIVE 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,19589984,"INDEL","GATATTGTCTCTTTCTCACTTAATTAAGTACTTGAACCAGACAGCAATTGACCC","G","frameshift_variant&start_lost","Vradi01g10110","Glycosyltransferase (EC 2.4.1.-)","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[1,19593173,"INDEL","G","GAA","frameshift_variant","Vradi01g10120","Laccase (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase) (Diphenol oxidase) (Urishiol oxidase)","lignin catabolic process [GO:0046274]","apoplast [GO:0048046]","copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]","apoplast [GO:0048046]; copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]; lignin catabolic process [GO:0046274]"]
[1,19593440,"SNP","C","A","stop_gained","Vradi01g10120","Laccase (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase) (Diphenol oxidase) (Urishiol oxidase)","lignin catabolic process [GO:0046274]","apoplast [GO:0048046]","copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]","apoplast [GO:0048046]; copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]; lignin catabolic process [GO:0046274]"]
[1,19619482,"INDEL","AGT","A","frameshift_variant&splice_acceptor_variant","Vradi01g10130","-","-","-","-","-"]
[1,20086785,"INDEL","CAG","C","frameshift_variant","Vradi01g10190","-","-","-","-","-"]
[1,20086788,"INDEL","CAATTATCTCTTCTTGGAACATG","C","frameshift_variant","Vradi01g10190","-","-","-","-","-"]
[1,20086843,"SNP","G","C","stop_gained","Vradi01g10190","-","-","-","-","-"]
[1,20088516,"INDEL","AT","A","frameshift_variant&start_lost","Vradi01g10190","-","-","-","-","-"]
[1,20581386,"INDEL","T","TG","frameshift_variant","Vradi01g10300","-","-","-","-","-"]
[1,20581388,"INDEL","CG","C","frameshift_variant","Vradi01g10300","-","-","-","-","-"]
[1,20696238,"INDEL","TTTCTCGAATCTTTACA","T","frameshift_variant","Vradi01g10410","protein CELLULOSE SYNTHASE INTERACTIVE 1","anisotropic cell growth [GO:0051211]; regulation of cellulose biosynthetic process [GO:2001006]","cellulose synthase complex [GO:0010330]","microtubule binding [GO:0008017]","cellulose synthase complex [GO:0010330]; microtubule binding [GO:0008017]; anisotropic cell growth [GO:0051211]; regulation of cellulose biosynthetic process [GO:2001006]"]
[1,20696383,"INDEL","TAGCACCA","TAAAGCACCA","frameshift_variant","Vradi01g10410","protein CELLULOSE SYNTHASE INTERACTIVE 1","anisotropic cell growth [GO:0051211]; regulation of cellulose biosynthetic process [GO:2001006]","cellulose synthase complex [GO:0010330]","microtubule binding [GO:0008017]","cellulose synthase complex [GO:0010330]; microtubule binding [GO:0008017]; anisotropic cell growth [GO:0051211]; regulation of cellulose biosynthetic process [GO:2001006]"]
[1,20905294,"INDEL","GCTTGGTTGAGGGAT","G","frameshift_variant","Vradi01g10560","probable zinc transporter protein DDB_G0269332","-","-","-","-"]
[1,21033048,"INDEL","TTC","T","frameshift_variant","Vradi01g10670","uncharacterized protein LOC106769153 isoform X4","-","-","-","-"]
[1,21181508,"SNP","G","T","stop_gained","Vradi01g10820","RNA-binding protein 39","mRNA processing [GO:0006397]","nucleus [GO:0005634]","RNA binding [GO:0003723]","nucleus [GO:0005634]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]"]
[1,21181553,"INDEL","G","GT","splice_donor_variant","Vradi01g10820","RNA-binding protein 39","mRNA processing [GO:0006397]","nucleus [GO:0005634]","RNA binding [GO:0003723]","nucleus [GO:0005634]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]"]
[1,21199234,"INDEL","C","CT","frameshift_variant","Vradi01g10840","Cellulose synthase (EC 2.4.1.12)","cellulose biosynthetic process [GO:0030244]; cell wall organization [GO:0071555]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","cellulose synthase (UDP-forming) activity [GO:0016760]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; cellulose synthase (UDP-forming) activity [GO:0016760]; metal ion binding [GO:0046872]; cell wall organization [GO:0071555]; cellulose biosynthetic process [GO:0030244]"]
[1,21453496,"INDEL","CGT","C","frameshift_variant","Vradi01g11040","-","-","-","-","-"]
[1,21675411,"SNP","C","A","stop_gained","Vradi01g11230","uncharacterized protein LOC106780658","recombinational repair [GO:0000725]","-","-","recombinational repair [GO:0000725]"]
[1,21869651,"SNP","G","A","splice_acceptor_variant","Vradi01g11260","Transmembrane protein 18","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,21869810,"SNP","A","G","splice_donor_variant","Vradi01g11260","Transmembrane protein 18","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,21988587,"SNP","T","G","splice_donor_variant","Vradi01g11300","pentatricopeptide repeat-containing protein At2g18940, chloroplastic","-","-","-","-"]
[1,21999291,"INDEL","GT","G","frameshift_variant","Vradi01g11310","uncharacterized protein LOC106771968","DNA-dependent DNA replication [GO:0006261]","-","DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]","DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; DNA-dependent DNA replication [GO:0006261]"]
[1,22023708,"SNP","G","A","stop_gained","Vradi01g11330","phosphatidylinositol 4-phosphate 5-kinase 6 isoform X1","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[1,22023823,"SNP","C","T","splice_acceptor_variant","Vradi01g11330","phosphatidylinositol 4-phosphate 5-kinase 6 isoform X1","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[1,22048664,"SNP","G","A","splice_donor_variant","Vradi01g11350","-","-","-","-","-"]
[1,22153787,"INDEL","AG","A","frameshift_variant","Vradi01g11390","-","-","-","-","-"]
[1,22204289,"SNP","C","T","stop_gained","Vradi01g11410","probable LRR receptor-like serine/threonine-protein kinase At1g34110","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[1,22208885,"INDEL","G","GAT","frameshift_variant","Vradi01g11410","probable LRR receptor-like serine/threonine-protein kinase At1g34110","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[1,22208886,"INDEL","CCT","C","frameshift_variant","Vradi01g11410","probable LRR receptor-like serine/threonine-protein kinase At1g34110","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[1,22208892,"SNP","G","C","stop_gained","Vradi01g11410","probable LRR receptor-like serine/threonine-protein kinase At1g34110","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[1,22359233,"INDEL","AT","A","frameshift_variant","Vradi01g11450","-","-","-","-","-"]
[1,22359437,"SNP","C","T","start_lost","Vradi01g11450","-","-","-","-","-"]
[1,22537877,"INDEL","TATATTATTGAATGATCAATTAGTCTGGTATTGGTG","T","frameshift_variant&splice_acceptor_variant","Vradi01g11500","uncharacterized protein LOC106766997","carbohydrate metabolic process [GO:0005975]","extracellular region [GO:0005576]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","extracellular region [GO:0005576]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[1,22556131,"INDEL","T","TC","frameshift_variant","Vradi01g11510","aquaporin PIP2-2 isoform X1","-","integral component of membrane [GO:0016021]","channel activity [GO:0015267]","integral component of membrane [GO:0016021]; channel activity [GO:0015267]"]
[1,22756449,"SNP","G","T","stop_gained","Vradi01g11620","mRNA cap-binding protein","-","cytoplasm [GO:0005737]","translation initiation factor activity [GO:0003743]","cytoplasm [GO:0005737]; translation initiation factor activity [GO:0003743]"]
[1,22824039,"INDEL","G","GTC","frameshift_variant","Vradi01g11630","5'-adenylylsulfate reductase-like 5","-","-","-","-"]
[1,22827021,"SNP","C","T","stop_gained","Vradi01g11630","5'-adenylylsulfate reductase-like 5","-","-","-","-"]
[1,22926954,"INDEL","GA","G","frameshift_variant","Vradi01g11650","-","-","-","-","-"]
[1,22934291,"INDEL","TAGAGGGAA","T","frameshift_variant&splice_acceptor_variant","Vradi01g11650","-","-","-","-","-"]
[1,22936100,"INDEL","TCACTAACCATTGCCAGCACC","T","frameshift_variant&splice_donor_variant","Vradi01g11660","-","-","-","-","-"]
[1,22936531,"INDEL","CAAGGTGCATTT","C","frameshift_variant","Vradi01g11660","-","-","-","-","-"]
[1,22936545,"INDEL","ACCAAATAAGGATTGGATAT","A","frameshift_variant","Vradi01g11660","-","-","-","-","-"]
[1,22936574,"SNP","C","T","stop_gained","Vradi01g11660","-","-","-","-","-"]
[1,23033507,"INDEL","T","TTTGTTCATTCC","frameshift_variant","Vradi01g11670","cell division cycle 5-like protein","cell division [GO:0051301]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","spliceosomal complex [GO:0005681]","-","spliceosomal complex [GO:0005681]; cell division [GO:0051301]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[1,23033611,"INDEL","CT","C","frameshift_variant","Vradi01g11670","cell division cycle 5-like protein","cell division [GO:0051301]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","spliceosomal complex [GO:0005681]","-","spliceosomal complex [GO:0005681]; cell division [GO:0051301]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[1,23033613,"INDEL","GCGACTCTCCTCAGCGGCAAACACTCCTCAGAGGCGACTCT","G","frameshift_variant","Vradi01g11670","cell division cycle 5-like protein","cell division [GO:0051301]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","spliceosomal complex [GO:0005681]","-","spliceosomal complex [GO:0005681]; cell division [GO:0051301]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[1,23058426,"INDEL","G","GTAAT","splice_donor_variant","Vradi01g11690","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[1,23329315,"INDEL","AG","A","frameshift_variant","Vradi01g11760","protein GIGANTEA isoform X1","regulation of photoperiodism, flowering [GO:2000028]","-","-","regulation of photoperiodism, flowering [GO:2000028]"]
[1,24010951,"SNP","C","T","stop_gained","Vradi01g11820","-","-","-","-","-"]
[1,24011044,"INDEL","A","AG","frameshift_variant","Vradi01g11820","-","-","-","-","-"]
[1,24076373,"INDEL","CCTGTGGTAACTGATACCCTCTTGTTTAG","C","splice_acceptor_variant","Vradi01g11840","mitochondrial import inner membrane translocase subunit PAM16 like 2","protein import into mitochondrial matrix [GO:0030150]","TIM23 mitochondrial import inner membrane translocase complex [GO:0005744]","-","TIM23 mitochondrial import inner membrane translocase complex [GO:0005744]; protein import into mitochondrial matrix [GO:0030150]"]
[1,24242654,"INDEL","CG","C","frameshift_variant","Vradi01g11870","-","-","-","-","-"]
[1,24253662,"SNP","G","A","start_lost","Vradi01g11880","uncharacterized protein LOC106769985","-","-","-","-"]
[1,24254599,"INDEL","TA","T","frameshift_variant","Vradi01g11880","uncharacterized protein LOC106769985","-","-","-","-"]
[1,24317717,"SNP","G","T","splice_acceptor_variant","Vradi01g11910","nucleobase-ascorbate transporter 4-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[1,24317776,"INDEL","AGG","A","frameshift_variant&splice_donor_variant","Vradi01g11910","nucleobase-ascorbate transporter 4-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[1,24318277,"SNP","C","T","stop_gained","Vradi01g11910","nucleobase-ascorbate transporter 4-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[1,24319104,"INDEL","TG","T","frameshift_variant","Vradi01g11910","nucleobase-ascorbate transporter 4-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[1,24345868,"INDEL","GCAAATATGATGCA","G","frameshift_variant","Vradi01g11920","uncharacterized protein LOC111241121","-","-","-","-"]
[1,24345926,"INDEL","AG","A","frameshift_variant","Vradi01g11920","uncharacterized protein LOC111241121","-","-","-","-"]
[1,24346175,"SNP","G","A","stop_gained","Vradi01g11920","uncharacterized protein LOC111241121","-","-","-","-"]
[1,24346214,"INDEL","TGA","T","frameshift_variant","Vradi01g11920","uncharacterized protein LOC111241121","-","-","-","-"]
[1,24346217,"INDEL","A","ATT","frameshift_variant","Vradi01g11920","uncharacterized protein LOC111241121","-","-","-","-"]
[1,24346532,"SNP","G","A","stop_gained","Vradi01g11920","uncharacterized protein LOC111241121","-","-","-","-"]
[1,24421591,"INDEL","TGGCTTCTGGTTCTTGGTGATTGTGGGTGGTTACGCAAGAGGAGCAACCATGGGGTTGCATTGGCCAGCGTTGGTAGTTTCATGCTGACGGTATGCTAATTTTGCAATTATAAGTGAGCTAGC","T","exon_loss_variant","Vradi01g11940","PXMP2/4 family protein 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,24421876,"INDEL","CTCTCTCGAAA","C","frameshift_variant","Vradi01g11940","PXMP2/4 family protein 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,24424623,"SNP","G","T","splice_acceptor_variant","Vradi01g11940","PXMP2/4 family protein 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,24424676,"INDEL","C","CTTTTCTTGGT","frameshift_variant","Vradi01g11940","PXMP2/4 family protein 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,24451400,"INDEL","G","GC","frameshift_variant","Vradi01g11960","uncharacterized protein LOC106775522 isoform X1","-","-","-","-"]
[1,24451401,"INDEL","A","AAGTGGTCAAAATTCAGATGG","frameshift_variant","Vradi01g11960","uncharacterized protein LOC106775522 isoform X1","-","-","-","-"]
[1,24664691,"INDEL","GT","G","frameshift_variant","Vradi01g12010","uncharacterized protein LOC106767506","glutamine metabolic process [GO:0006541]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; glutamine metabolic process [GO:0006541]"]
[1,24665544,"INDEL","T","TA","frameshift_variant","Vradi01g12010","uncharacterized protein LOC106767506","glutamine metabolic process [GO:0006541]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; glutamine metabolic process [GO:0006541]"]
[1,24665585,"SNP","C","T","splice_acceptor_variant","Vradi01g12010","uncharacterized protein LOC106767506","glutamine metabolic process [GO:0006541]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; glutamine metabolic process [GO:0006541]"]
[1,24729931,"SNP","C","G","stop_gained","Vradi01g12030","uncharacterized protein LOC111242704","-","-","-","-"]
[1,24808810,"SNP","C","G","stop_gained","Vradi01g12040","-","-","-","-","-"]
[1,25046605,"INDEL","A","AAG","frameshift_variant","Vradi01g12070","leucine-rich repeat receptor-like protein CLAVATA2","-","-","-","-"]
[1,25046608,"INDEL","AAT","A","frameshift_variant","Vradi01g12070","leucine-rich repeat receptor-like protein CLAVATA2","-","-","-","-"]
[1,25182779,"SNP","C","T","splice_donor_variant","Vradi01g12090","PH, RCC1 and FYVE domains-containing protein 1 isoform X1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[1,25280095,"INDEL","G","GT","splice_donor_variant","Vradi01g12110","RNA-binding protein 1 isoform X1","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[1,25351447,"SNP","G","A","stop_gained","Vradi01g12130","uncharacterized protein LOC106768862","-","-","-","-"]
[1,25451976,"SNP","C","A","stop_gained","Vradi01g12150","-","-","-","-","-"]
[1,25452382,"INDEL","ACT","A","frameshift_variant","Vradi01g12150","-","-","-","-","-"]
[1,25452481,"SNP","G","A","splice_acceptor_variant","Vradi01g12150","-","-","-","-","-"]
[1,25452702,"SNP","G","T","splice_acceptor_variant","Vradi01g12150","-","-","-","-","-"]
[1,25512848,"SNP","A","C","splice_acceptor_variant","Vradi01g12180","receptor kinase-like protein Xa21","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[1,25514359,"INDEL","C","CT","frameshift_variant","Vradi01g12180","receptor kinase-like protein Xa21","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[1,25514367,"INDEL","TC","T","frameshift_variant","Vradi01g12180","receptor kinase-like protein Xa21","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[1,25588029,"INDEL","AAC","A","frameshift_variant","Vradi01g12200","-","-","-","-","-"]
[1,25588036,"INDEL","ATC","A","frameshift_variant","Vradi01g12200","-","-","-","-","-"]
[1,25588044,"INDEL","T","TCAAA","frameshift_variant","Vradi01g12200","-","-","-","-","-"]
[1,25588054,"INDEL","CTCATTTT","C","frameshift_variant","Vradi01g12200","-","-","-","-","-"]
[1,25588794,"INDEL","C","CT","frameshift_variant","Vradi01g12200","-","-","-","-","-"]
[1,25589464,"INDEL","CG","C","frameshift_variant","Vradi01g12200","-","-","-","-","-"]
[1,25964255,"SNP","G","A","stop_gained","Vradi01g12290","-","-","-","-","-"]
[1,25965360,"INDEL","T","TC","frameshift_variant","Vradi01g12290","-","-","-","-","-"]
[1,26036233,"INDEL","TCG","T","frameshift_variant","Vradi01g12300","receptor-like protein 12","-","-","-","-"]
[1,26036399,"SNP","G","T","stop_gained","Vradi01g12300","receptor-like protein 12","-","-","-","-"]
[1,26036488,"INDEL","T","TC","frameshift_variant","Vradi01g12300","receptor-like protein 12","-","-","-","-"]
[1,26063845,"INDEL","T","TGTTCAGA","frameshift_variant","Vradi01g12310","uncharacterized protein LOC106771179 isoform X3","transcription initiation from RNA polymerase III promoter [GO:0006384]","transcription factor TFIIIC complex [GO:0000127]","histone acetyltransferase activity [GO:0004402]","transcription factor TFIIIC complex [GO:0000127]; histone acetyltransferase activity [GO:0004402]; transcription initiation from RNA polymerase III promoter [GO:0006384]"]
[1,26063849,"INDEL","C","CAGAAGCCG","frameshift_variant","Vradi01g12310","uncharacterized protein LOC106771179 isoform X3","transcription initiation from RNA polymerase III promoter [GO:0006384]","transcription factor TFIIIC complex [GO:0000127]","histone acetyltransferase activity [GO:0004402]","transcription factor TFIIIC complex [GO:0000127]; histone acetyltransferase activity [GO:0004402]; transcription initiation from RNA polymerase III promoter [GO:0006384]"]
[1,26661054,"SNP","T","A","stop_gained","Vradi01g12390","uncharacterized protein LOC111240694","-","-","-","-"]
[1,26661194,"SNP","T","A","stop_gained","Vradi01g12390","uncharacterized protein LOC111240694","-","-","-","-"]
[1,26661712,"INDEL","T","TAA","frameshift_variant","Vradi01g12390","uncharacterized protein LOC111240694","-","-","-","-"]
[1,26661714,"INDEL","ATG","A","frameshift_variant","Vradi01g12390","uncharacterized protein LOC111240694","-","-","-","-"]
[1,26681665,"INDEL","TG","T","frameshift_variant","Vradi01g12400","uncharacterized protein LOC106768631 isoform X2","-","-","-","-"]
[1,27169042,"INDEL","AGC","A","frameshift_variant","Vradi01g12470","uncharacterized protein LOC106764893 isoform X1","-","-","-","-"]
[1,27203419,"SNP","G","T","stop_gained","Vradi01g12480","abscisic stress-ripening protein 1-like","-","-","-","-"]
[1,27271895,"SNP","A","G","stop_lost","Vradi01g12500","UPF0496 protein 4-like","-","integral component of membrane [GO:0016021]","nucleic acid binding [GO:0003676]","integral component of membrane [GO:0016021]; nucleic acid binding [GO:0003676]"]
[1,27332744,"INDEL","CATAAT","C","frameshift_variant","Vradi01g12520","protein SET DOMAIN GROUP 41 isoform X1","-","-","-","-"]
[1,27332788,"INDEL","TGGGA","T","frameshift_variant","Vradi01g12520","protein SET DOMAIN GROUP 41 isoform X1","-","-","-","-"]
[1,27338977,"INDEL","TCTGAA","T","frameshift_variant","Vradi01g12530","probable manganese-transporting ATPase PDR2","-","integral component of membrane [GO:0016021]","oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]","integral component of membrane [GO:0016021]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]"]
[1,27577184,"INDEL","A","AGG","frameshift_variant","Vradi01g12540","-","-","-","-","-"]
[1,27577187,"INDEL","CGT","C","frameshift_variant","Vradi01g12540","-","-","-","-","-"]
[1,27578212,"SNP","C","A","stop_gained","Vradi01g12540","-","-","-","-","-"]
[1,27578659,"INDEL","CAT","C","frameshift_variant","Vradi01g12540","-","-","-","-","-"]
[1,27578911,"INDEL","T","TATA","stop_gained","Vradi01g12540","-","-","-","-","-"]
[1,27578934,"INDEL","TG","T","frameshift_variant","Vradi01g12540","-","-","-","-","-"]
[1,27578946,"INDEL","TTAGATA","T","stop_gained","Vradi01g12540","-","-","-","-","-"]
[1,27579002,"INDEL","C","CTA","frameshift_variant","Vradi01g12540","-","-","-","-","-"]
[1,27579040,"SNP","T","A","stop_gained","Vradi01g12540","-","-","-","-","-"]
[1,27579094,"INDEL","T","TA","frameshift_variant","Vradi01g12540","-","-","-","-","-"]
[1,27579125,"SNP","A","T","stop_lost","Vradi01g12540","-","-","-","-","-"]
[1,27588773,"SNP","T","C","start_lost","Vradi01g12550","-","-","-","-","-"]
[1,27588941,"INDEL","TGA","T","frameshift_variant","Vradi01g12550","-","-","-","-","-"]
[1,27588946,"INDEL","G","GA","frameshift_variant","Vradi01g12550","-","-","-","-","-"]
[1,27906325,"INDEL","AGT","A","frameshift_variant","Vradi01g12650","-","-","-","-","-"]
[1,28203737,"INDEL","AT","A","frameshift_variant&start_lost","Vradi01g12670","-","-","-","-","-"]
[1,28359507,"INDEL","C","CTCCGCCTT","frameshift_variant","Vradi01g12710","B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-","cell cycle [GO:0007049]; cell division [GO:0051301]"]
[1,28359512,"INDEL","C","CGT","frameshift_variant","Vradi01g12710","B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-","cell cycle [GO:0007049]; cell division [GO:0051301]"]
[1,28363864,"SNP","T","A","stop_gained","Vradi01g12710","B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-","cell cycle [GO:0007049]; cell division [GO:0051301]"]
[1,28375790,"INDEL","C","CAGGTGAG","frameshift_variant","Vradi01g12720","uncharacterized protein LOC106774810","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]; RNA binding [GO:0003723]","methyltransferase activity [GO:0008168]; RNA binding [GO:0003723]; methylation [GO:0032259]"]
[1,28420885,"SNP","A","G","stop_lost","Vradi01g12750","-","-","-","-","-"]
[1,28439485,"SNP","A","G","stop_lost","Vradi01g12760","-","-","-","-","-"]
[1,28439501,"INDEL","AGCAG","A","frameshift_variant","Vradi01g12760","-","-","-","-","-"]
[1,28450550,"SNP","T","C","splice_donor_variant","Vradi01g12770","-","-","-","-","-"]
[1,28796504,"SNP","G","A","splice_acceptor_variant","Vradi01g12790","uncharacterized protein LOC111241783","-","-","-","-"]
[1,28797394,"SNP","G","T","stop_gained","Vradi01g12790","uncharacterized protein LOC111241783","-","-","-","-"]
[1,28797580,"SNP","C","T","stop_gained","Vradi01g12790","uncharacterized protein LOC111241783","-","-","-","-"]
[1,28831652,"SNP","C","G","stop_gained","Vradi01g12800","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,28959435,"INDEL","TA","T","frameshift_variant","Vradi01g12840","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,28959540,"INDEL","CA","C","frameshift_variant","Vradi01g12840","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,28959546,"INDEL","C","CT","frameshift_variant","Vradi01g12840","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,28959582,"INDEL","T","TAG","frameshift_variant","Vradi01g12840","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,28960145,"SNP","C","T","stop_gained","Vradi01g12840","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,28961197,"INDEL","CAT","C","frameshift_variant","Vradi01g12840","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,29004604,"INDEL","T","TG","frameshift_variant","Vradi01g12850","-","-","-","-","-"]
[1,29146230,"SNP","C","A","stop_gained","Vradi01g12890","LRR receptor-like serine/threonine-protein kinase GSO1","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[1,29146316,"INDEL","C","CT","frameshift_variant","Vradi01g12890","LRR receptor-like serine/threonine-protein kinase GSO1","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[1,29178859,"SNP","C","A","stop_gained","Vradi01g12910","receptor-like protein 12","-","-","-","-"]
[1,29179394,"SNP","G","T","stop_gained","Vradi01g12910","receptor-like protein 12","-","-","-","-"]
[1,29179848,"SNP","C","G","stop_gained","Vradi01g12910","receptor-like protein 12","-","-","-","-"]
[1,29256062,"INDEL","G","GT","frameshift_variant&stop_gained","Vradi01g12920","receptor-like protein 12","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,29263509,"INDEL","C","CT","frameshift_variant","Vradi01g12930","-","-","-","-","-"]
[1,29263673,"SNP","G","A","stop_gained","Vradi01g12930","-","-","-","-","-"]
[1,29263710,"SNP","C","A","start_lost","Vradi01g12930","-","-","-","-","-"]
[1,29321615,"INDEL","ACTAACTCAGGCAGTGGAAACAGAAACTTGAGTTTCCCTTTCCCTCAATTCCTTCCTC","A","frameshift_variant&stop_lost","Vradi01g12950","protein MITOFERRINLIKE 1, chloroplastic","iron ion transport [GO:0006826]; response to iron ion [GO:0010039]","chloroplast envelope [GO:0009941]; integral component of membrane [GO:0016021]","-","chloroplast envelope [GO:0009941]; integral component of membrane [GO:0016021]; iron ion transport [GO:0006826]; response to iron ion [GO:0010039]"]
[1,30010600,"INDEL","CT","C","frameshift_variant","Vradi01g13060","-","-","-","-","-"]
[1,30010771,"INDEL","CG","C","frameshift_variant","Vradi01g13060","-","-","-","-","-"]
[1,30010835,"INDEL","A","AC","frameshift_variant","Vradi01g13060","-","-","-","-","-"]
[1,30010838,"INDEL","TG","T","frameshift_variant","Vradi01g13060","-","-","-","-","-"]
[1,30010858,"SNP","C","G","start_lost","Vradi01g13060","-","-","-","-","-"]
[1,30016318,"INDEL","G","GTCTGA","frameshift_variant","Vradi01g13080","-","-","-","-","-"]
[1,30020731,"INDEL","ATAGAT","A","frameshift_variant","Vradi01g13080","-","-","-","-","-"]
[1,30021161,"INDEL","C","CA","frameshift_variant","Vradi01g13080","-","-","-","-","-"]
[1,30065811,"SNP","G","C","stop_gained","Vradi01g13110","-","-","-","-","-"]
[1,30099431,"INDEL","G","GTAGGGGTTGT","splice_donor_variant","Vradi01g13120","uncharacterized protein LOC106775032 isoform X3","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[1,30216357,"INDEL","C","CCT","frameshift_variant","Vradi01g13140","-","-","-","-","-"]
[1,30216359,"INDEL","TGG","T","frameshift_variant","Vradi01g13140","-","-","-","-","-"]
[1,30216369,"INDEL","TAG","T","frameshift_variant","Vradi01g13140","-","-","-","-","-"]
[1,30216374,"INDEL","A","AGG","frameshift_variant","Vradi01g13140","-","-","-","-","-"]
[1,30216378,"INDEL","A","AAT","frameshift_variant","Vradi01g13140","-","-","-","-","-"]
[1,30216381,"INDEL","C","CA","frameshift_variant","Vradi01g13140","-","-","-","-","-"]
[1,30216471,"INDEL","TG","T","frameshift_variant","Vradi01g13140","-","-","-","-","-"]
[1,30217826,"INDEL","G","GCGTCATTGAGCTCTAGATCAGC","frameshift_variant&stop_gained","Vradi01g13140","-","-","-","-","-"]
[1,30335945,"INDEL","C","CTGTGACA","frameshift_variant","Vradi01g13150","LOW QUALITY PROTEIN: ABC transporter C family member 10-like","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[1,30566899,"INDEL","C","CTT","frameshift_variant","Vradi01g13190","-","-","-","-","-"]
[1,30635250,"SNP","A","G","start_lost","Vradi01g13210","acidic endochitinase","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[1,30635323,"SNP","G","A","stop_gained","Vradi01g13210","acidic endochitinase","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[1,30635363,"SNP","G","A","splice_donor_variant","Vradi01g13210","acidic endochitinase","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[1,30635364,"SNP","T","C","splice_donor_variant","Vradi01g13210","acidic endochitinase","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[1,30686070,"SNP","G","T","stop_gained","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30686535,"INDEL","A","AG","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30686538,"INDEL","GA","G","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30686908,"INDEL","TGG","T","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30686911,"INDEL","C","CAA","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30687147,"SNP","A","T","stop_gained","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30687256,"INDEL","T","TCG","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30687263,"INDEL","AAT","A","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30687268,"INDEL","T","TC","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30687269,"INDEL","T","TCAGCA","frameshift_variant","Vradi01g13220","uncharacterized protein LOC106779410","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,30692850,"INDEL","GCTTTT","G","frameshift_variant","Vradi01g13230","-","-","-","-","-"]
[1,30737440,"SNP","G","A","start_lost","Vradi01g13250","Pectate lyase (EC 4.2.2.2)","pectin catabolic process [GO:0045490]","cell wall [GO:0005618]; integral component of membrane [GO:0016021]","metal ion binding [GO:0046872]; pectate lyase activity [GO:0030570]","cell wall [GO:0005618]; integral component of membrane [GO:0016021]; metal ion binding [GO:0046872]; pectate lyase activity [GO:0030570]; pectin catabolic process [GO:0045490]"]
[1,31288458,"INDEL","GT","G","frameshift_variant","Vradi01g13290","uncharacterized protein LOC111240865","-","-","-","-"]
[1,31672426,"SNP","A","C","splice_donor_variant","Vradi01g13350","-","-","-","-","-"]
[1,31673774,"INDEL","ACG","A","frameshift_variant","Vradi01g13350","-","-","-","-","-"]
[1,31714978,"INDEL","C","CTA","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31714982,"INDEL","GCA","G","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715072,"INDEL","C","CG","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715207,"INDEL","ACTCT","A","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715209,"INDEL","G","GTTTT","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715213,"SNP","*","T","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715289,"INDEL","CGT","C","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715291,"INDEL","T","TGC","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715297,"INDEL","ATG","A","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715300,"INDEL","A","AGG","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31715302,"SNP","*","G","frameshift_variant","Vradi01g13360","LOW QUALITY PROTEIN: uncharacterized protein LOC106761818","photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]","chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; photosystem II [GO:0009523]; chlorophyll binding [GO:0016168]; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity [GO:0045156]; metal ion binding [GO:0046872]; photosynthetic electron transport in photosystem II [GO:0009772]; protein-chromophore linkage [GO:0018298]"]
[1,31873993,"INDEL","TG","T","frameshift_variant","Vradi01g13390","-","-","-","-","-"]
[1,32002460,"INDEL","T","TC","frameshift_variant","Vradi01g13420","uncharacterized protein LOC106779719","DNA integration [GO:0015074]","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]; DNA integration [GO:0015074]"]
[1,32002486,"INDEL","CTTAA","C","frameshift_variant","Vradi01g13420","uncharacterized protein LOC106779719","DNA integration [GO:0015074]","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]; DNA integration [GO:0015074]"]
[1,32002684,"INDEL","CTT","C","frameshift_variant","Vradi01g13420","uncharacterized protein LOC106779719","DNA integration [GO:0015074]","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]; DNA integration [GO:0015074]"]
[1,32002824,"SNP","C","A","stop_gained","Vradi01g13420","uncharacterized protein LOC106779719","DNA integration [GO:0015074]","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]; DNA integration [GO:0015074]"]
[1,32074160,"INDEL","GTCAGCGACTGTTGTTCATGGTATGCAACTATTAGAGGATGAGGTGAAAGTCTCAA","G","frameshift_variant&start_lost","Vradi01g13430","-","-","-","-","-"]
[1,32420910,"SNP","C","A","stop_gained","Vradi01g13500","-","-","-","-","-"]
[1,32421161,"SNP","G","T","stop_gained","Vradi01g13500","-","-","-","-","-"]
[1,32421276,"INDEL","AC","A","frameshift_variant","Vradi01g13500","-","-","-","-","-"]
[1,32421278,"INDEL","AATGCTTTCGAGAT","A","frameshift_variant","Vradi01g13500","-","-","-","-","-"]
[1,32426191,"INDEL","GTGTTCAAGCATGTGGTAATGTATTT","G","frameshift_variant&splice_donor_variant","Vradi01g13510","SPX domain-containing membrane protein At4g22990","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[1,32426199,"SNP","*","G","frameshift_variant","Vradi01g13510","SPX domain-containing membrane protein At4g22990","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[1,32940386,"INDEL","TATTAATCTTGAAACTTATGCAGTTCAG","T","frameshift_variant&splice_acceptor_variant","Vradi01g13550","uncharacterized protein LOC111242620","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,32948983,"SNP","C","T","stop_gained","Vradi01g13550","uncharacterized protein LOC111242620","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,32949855,"SNP","G","A","splice_acceptor_variant","Vradi01g13550","uncharacterized protein LOC111242620","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,32963002,"SNP","A","G","stop_lost","Vradi01g13560","-","-","-","-","-"]
[1,33048444,"SNP","C","T","stop_gained","Vradi01g13600","silicon efflux transporter LSI2","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; transmembrane transport [GO:0055085]"]
[1,33048528,"SNP","C","T","stop_gained","Vradi01g13600","silicon efflux transporter LSI2","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; transmembrane transport [GO:0055085]"]
[1,33048533,"SNP","T","A","stop_gained","Vradi01g13600","silicon efflux transporter LSI2","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; transmembrane transport [GO:0055085]"]
[1,33112628,"INDEL","ATT","A","frameshift_variant&start_lost","Vradi01g13620","BAHD acyltransferase DCR","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[1,33196633,"INDEL","C","CTT","frameshift_variant","Vradi01g13640","uncharacterized protein LOC106766434","-","-","-","-"]
[1,33196657,"INDEL","A","AC","frameshift_variant","Vradi01g13640","uncharacterized protein LOC106766434","-","-","-","-"]
[1,33215737,"INDEL","G","GATATTAGTCGGAGTAAAT","stop_gained","Vradi01g13650","Protein DETOXIFICATION (Multidrug and toxic compound extrusion protein)","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[1,33286209,"SNP","T","G","stop_gained","Vradi01g13670","Prolyl-tRNA synthetase (EC 6.1.1.15)","prolyl-tRNA aminoacylation [GO:0006433]","cytoplasm [GO:0005737]","ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]; prolyl-tRNA aminoacylation [GO:0006433]"]
[1,33362423,"SNP","A","G","stop_lost","Vradi01g13740","-","-","-","-","-"]
[1,33362480,"SNP","G","A","stop_gained","Vradi01g13740","-","-","-","-","-"]
[1,33362494,"INDEL","GT","G","frameshift_variant","Vradi01g13740","-","-","-","-","-"]
[1,33362496,"INDEL","CGGAGCTTTGATCGGTGG","C","frameshift_variant","Vradi01g13740","-","-","-","-","-"]
[1,33591982,"SNP","A","C","stop_lost","Vradi01g13830","two pore calcium channel protein 1","-","integral component of membrane [GO:0016021]","calcium ion binding [GO:0005509]; ion channel activity [GO:0005216]","integral component of membrane [GO:0016021]; calcium ion binding [GO:0005509]; ion channel activity [GO:0005216]"]
[1,33602488,"INDEL","GA","G","frameshift_variant","Vradi01g13840","uncharacterized protein LOC106772671","-","-","-","-"]
[1,33832357,"INDEL","C","CA","frameshift_variant","Vradi01g13880","heat shock protein 83","protein folding [GO:0006457]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; unfolded protein binding [GO:0051082]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]; unfolded protein binding [GO:0051082]; protein folding [GO:0006457]"]
[1,33833764,"SNP","T","A","stop_gained","Vradi01g13880","heat shock protein 83","protein folding [GO:0006457]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; unfolded protein binding [GO:0051082]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]; unfolded protein binding [GO:0051082]; protein folding [GO:0006457]"]
[1,33939860,"INDEL","C","CGTTGAAGTCGTAACTA","frameshift_variant&stop_gained","Vradi01g13920","heavy metal-associated isoprenylated plant protein 12-like isoform X1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[1,33972906,"SNP","C","A","splice_acceptor_variant","Vradi01g13930","-","-","-","-","-"]
[1,33976788,"INDEL","A","AG","frameshift_variant","Vradi01g13930","-","-","-","-","-"]
[1,34673078,"INDEL","TTCTTCATTAACTCCATGTAAAGGTTC","TTTCATTAACTCCATGTAAAGGTTC","frameshift_variant","Vradi01g14080","short-chain dehydrogenase TIC 32, chloroplastic-like","-","-","-","-"]
[1,34673247,"SNP","A","T","stop_gained","Vradi01g14080","short-chain dehydrogenase TIC 32, chloroplastic-like","-","-","-","-"]
[1,34673262,"SNP","G","C","stop_gained","Vradi01g14080","short-chain dehydrogenase TIC 32, chloroplastic-like","-","-","-","-"]
[1,34673371,"SNP","G","A","stop_gained","Vradi01g14080","short-chain dehydrogenase TIC 32, chloroplastic-like","-","-","-","-"]
[1,34673431,"INDEL","CG","C","frameshift_variant","Vradi01g14080","short-chain dehydrogenase TIC 32, chloroplastic-like","-","-","-","-"]
[1,34787200,"SNP","A","T","splice_acceptor_variant","Vradi01g14130","short-chain dehydrogenase TIC 32, chloroplastic","-","-","-","-"]
[1,34789512,"INDEL","CAT","C","frameshift_variant&start_lost","Vradi01g14130","short-chain dehydrogenase TIC 32, chloroplastic","-","-","-","-"]
[1,34851677,"SNP","A","T","stop_lost","Vradi01g14170","kinesin-like protein KIN-10C","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[1,34898559,"INDEL","G","GT","frameshift_variant","Vradi01g14190","uncharacterized protein LOC111241088","-","-","-","-"]
[1,34900711,"SNP","A","G","start_lost","Vradi01g14190","uncharacterized protein LOC111241088","-","-","-","-"]
[1,34973334,"SNP","C","G","stop_gained","Vradi01g14240","uncharacterized protein LOC106778651","-","-","-","-"]
[1,34988145,"INDEL","GC","G","frameshift_variant","Vradi01g14240","uncharacterized protein LOC106778651","-","-","-","-"]
[1,35126715,"INDEL","C","CA","frameshift_variant","Vradi01g14250","-","-","-","-","-"]
[1,35126860,"INDEL","C","CTGCTGAAGGAT","frameshift_variant&stop_gained","Vradi01g14250","-","-","-","-","-"]
[1,35126861,"INDEL","*","TGCTG","frameshift_variant","Vradi01g14250","-","-","-","-","-"]
[1,35126866,"INDEL","*","AAGGATTGCT","frameshift_variant","Vradi01g14250","-","-","-","-","-"]
[1,35236817,"INDEL","TCAAAG","T","frameshift_variant","Vradi01g14280","oxalate--CoA ligase-like","-","-","ligase activity [GO:0016874]","ligase activity [GO:0016874]"]
[1,35236902,"INDEL","CTT","C","frameshift_variant","Vradi01g14280","oxalate--CoA ligase-like","-","-","ligase activity [GO:0016874]","ligase activity [GO:0016874]"]
[1,35362642,"SNP","C","A","splice_donor_variant","Vradi01g14300","-","-","-","-","-"]
[1,35376406,"INDEL","C","CTTCTGGTAGTGATCCTTTCAAAGAAATATTCGTTTATGGATATTATTTTTTACTTTGAGATTTGCATTTATTCATAATGGGTTATTTTGTTATTCAGCTGAAGGAAG","frameshift_variant&stop_gained","Vradi01g14310","protein YLS3","-","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]","-","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]"]
[1,35390936,"SNP","A","G","stop_lost","Vradi01g14330","protein YLS3 isoform X2","-","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]","-","anchored component of membrane [GO:0031225]; plasma membrane [GO:0005886]"]
[1,35523398,"SNP","A","T","splice_donor_variant","Vradi01g14390","uncharacterized protein LOC106773355","-","-","-","-"]
[1,35631792,"INDEL","TTA","T","frameshift_variant","Vradi01g14400","-","-","-","-","-"]
[1,35631802,"INDEL","C","CT","frameshift_variant","Vradi01g14400","-","-","-","-","-"]
[1,35631900,"SNP","C","T","splice_acceptor_variant","Vradi01g14400","-","-","-","-","-"]
[1,35641048,"INDEL","C","CT","frameshift_variant","Vradi01g14410","remorin","-","-","-","-"]
[1,35675732,"SNP","C","T","stop_gained","Vradi01g14430","uncharacterized protein PFB0145c","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,35675752,"INDEL","A","ATAG","stop_gained","Vradi01g14430","uncharacterized protein PFB0145c","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,35792347,"SNP","A","C","stop_lost","Vradi01g14510","-","-","-","-","-"]
[1,35833446,"INDEL","GAT","G","frameshift_variant","Vradi01g14540","uncharacterized protein LOC106766141","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[1,35833449,"INDEL","G","GGA","frameshift_variant","Vradi01g14540","uncharacterized protein LOC106766141","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[1,35883012,"INDEL","GTCTCCTCATATATGGACTTCATGGAGCAAGAGTCAATAAATTGT","G","frameshift_variant","Vradi01g14570","E3 ubiquitin-protein ligase ATL31","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,35883456,"SNP","C","G","splice_donor_variant","Vradi01g14570","E3 ubiquitin-protein ligase ATL31","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,35884261,"SNP","C","T","stop_gained","Vradi01g14570","E3 ubiquitin-protein ligase ATL31","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,35884692,"SNP","T","A","stop_gained","Vradi01g14570","E3 ubiquitin-protein ligase ATL31","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,35884747,"SNP","C","T","splice_acceptor_variant","Vradi01g14570","E3 ubiquitin-protein ligase ATL31","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[1,35921658,"SNP","G","A","stop_gained","Vradi01g14580","putative GEM-like protein 8","-","-","-","-"]
[1,35921917,"INDEL","GCTATTTTTTCCTGTGTCCTTCATGTCATC","G","frameshift_variant","Vradi01g14580","putative GEM-like protein 8","-","-","-","-"]
[1,35922528,"SNP","T","C","stop_lost","Vradi01g14590","-","-","-","-","-"]
[1,36020856,"SNP","T","A","stop_lost","Vradi01g14610","F-box/LRR-repeat protein At3g26922 isoform X1","-","-","-","-"]
[1,36068886,"SNP","C","A","splice_acceptor_variant","Vradi01g14630","cytochrome P450 71A21-like","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","integral component of membrane [GO:0016021]; heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[1,36096871,"SNP","C","A","stop_lost","Vradi01g14640","cytochrome P450 71A26-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[2,81561,"SNP","C","A","stop_gained","Vradi02g00010","-","-","-","-","-"]
[2,81665,"SNP","C","T","stop_gained","Vradi02g00010","-","-","-","-","-"]
[2,176091,"INDEL","C","CGCGA","frameshift_variant","Vradi02g00100","phosphoinositide phosphatase SAC1","phosphatidylinositol dephosphorylation [GO:0046856]","vacuolar membrane [GO:0005774]","phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity [GO:0043813]","vacuolar membrane [GO:0005774]; phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity [GO:0043813]; phosphatidylinositol dephosphorylation [GO:0046856]"]
[2,176146,"SNP","C","T","splice_acceptor_variant","Vradi02g00100","phosphoinositide phosphatase SAC1","phosphatidylinositol dephosphorylation [GO:0046856]","vacuolar membrane [GO:0005774]","phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity [GO:0043813]","vacuolar membrane [GO:0005774]; phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity [GO:0043813]; phosphatidylinositol dephosphorylation [GO:0046856]"]
[2,176378,"INDEL","C","CTG","frameshift_variant","Vradi02g00100","phosphoinositide phosphatase SAC1","phosphatidylinositol dephosphorylation [GO:0046856]","vacuolar membrane [GO:0005774]","phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity [GO:0043813]","vacuolar membrane [GO:0005774]; phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity [GO:0043813]; phosphatidylinositol dephosphorylation [GO:0046856]"]
[2,400760,"SNP","G","A","splice_donor_variant","Vradi02g00410","-","-","-","-","-"]
[2,590115,"SNP","A","T","splice_acceptor_variant","Vradi02g00620","Protein RFT1 homolog","dolichol-linked oligosaccharide biosynthetic process [GO:0006488]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; dolichol-linked oligosaccharide biosynthetic process [GO:0006488]"]
[2,611638,"INDEL","TTCTG","T","frameshift_variant","Vradi02g00630","leucine-rich repeat receptor-like protein kinase TDR","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,611735,"INDEL","AATGCAGGAGCAGG","A","frameshift_variant","Vradi02g00630","leucine-rich repeat receptor-like protein kinase TDR","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,611750,"INDEL","TGCAG","T","frameshift_variant","Vradi02g00630","leucine-rich repeat receptor-like protein kinase TDR","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,611758,"INDEL","AG","A","frameshift_variant","Vradi02g00630","leucine-rich repeat receptor-like protein kinase TDR","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,698246,"INDEL","CTT","C","frameshift_variant","Vradi02g00710","vacuolar fusion protein CCZ1 homolog B-like isoform X1","vesicle-mediated transport [GO:0016192]","Mon1-Ccz1 complex [GO:0035658]","-","Mon1-Ccz1 complex [GO:0035658]; vesicle-mediated transport [GO:0016192]"]
[2,743217,"INDEL","CAA","CA","frameshift_variant","Vradi02g00750","tRNA-dihydrouridine synthase (EC 1.3.1.-)","-","-","flavin adenine dinucleotide binding [GO:0050660]; tRNA dihydrouridine synthase activity [GO:0017150]","flavin adenine dinucleotide binding [GO:0050660]; tRNA dihydrouridine synthase activity [GO:0017150]"]
[2,789325,"SNP","A","T","splice_donor_variant","Vradi02g00820","protein transport protein SEC31 homolog B","endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]","endoplasmic reticulum [GO:0005783]","-","endoplasmic reticulum [GO:0005783]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]"]
[2,824855,"INDEL","CCGTTACGCTGCATAA","C","frameshift_variant&splice_acceptor_variant","Vradi02g00880","protein RETICULATA-RELATED 4, chloroplastic-like","-","chloroplast membrane [GO:0031969]","-","chloroplast membrane [GO:0031969]"]
[2,846049,"INDEL","AT","A","frameshift_variant","Vradi02g00920","-","-","-","-","-"]
[2,846370,"INDEL","ACATTTGTTGCAAAACCATCTGATT","A","start_lost","Vradi02g00920","-","-","-","-","-"]
[2,916326,"INDEL","T","TG","frameshift_variant","Vradi02g01010","uncharacterized protein LOC106779038","-","-","-","-"]
[2,1091810,"INDEL","CCCATTTCCCAT","C","frameshift_variant","Vradi02g01150","protein JINGUBANG","-","-","-","-"]
[2,1091960,"INDEL","TA","T","frameshift_variant","Vradi02g01150","protein JINGUBANG","-","-","-","-"]
[2,1120252,"INDEL","T","TTA","frameshift_variant","Vradi02g01160","scarecrow-like protein 3","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[2,1134500,"SNP","T","G","splice_acceptor_variant","Vradi02g01190","NO-associated protein 1, chloroplastic/mitochondrial","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]","GTP binding [GO:0005525]; GTPase activity [GO:0003924]"]
[2,1138083,"INDEL","GGT","G","frameshift_variant","Vradi02g01190","NO-associated protein 1, chloroplastic/mitochondrial","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]","GTP binding [GO:0005525]; GTPase activity [GO:0003924]"]
[2,1138086,"INDEL","ATCCTCCG","A","frameshift_variant","Vradi02g01190","NO-associated protein 1, chloroplastic/mitochondrial","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]","GTP binding [GO:0005525]; GTPase activity [GO:0003924]"]
[2,1144573,"SNP","C","T","stop_gained","Vradi02g01200","cell number regulator 6","-","-","-","-"]
[2,1144578,"INDEL","AGTGTCTTC","A","frameshift_variant","Vradi02g01200","cell number regulator 6","-","-","-","-"]
[2,1144595,"SNP","T","A","stop_gained","Vradi02g01200","cell number regulator 6","-","-","-","-"]
[2,1144644,"INDEL","GC","G","frameshift_variant","Vradi02g01200","cell number regulator 6","-","-","-","-"]
[2,1282175,"INDEL","ATGAATGTCCCTTGAGTCAG","A","frameshift_variant","Vradi02g01360","Growth-regulating factor","developmental process [GO:0032502]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351]","nucleus [GO:0005634]","ATP binding [GO:0005524]","nucleus [GO:0005634]; ATP binding [GO:0005524]; developmental process [GO:0032502]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351]"]
[2,1327784,"INDEL","GTC","G","frameshift_variant","Vradi02g01400","Prohibitin","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]"]
[2,1328300,"INDEL","TC","T","frameshift_variant","Vradi02g01400","Prohibitin","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]"]
[2,1328330,"INDEL","A","ATCGCATAC","frameshift_variant","Vradi02g01400","Prohibitin","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]"]
[2,1355316,"INDEL","C","CT","frameshift_variant","Vradi02g01440","uncharacterized protein LOC106779387 isoform X1","-","-","kinase activity [GO:0016301]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]","kinase activity [GO:0016301]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]"]
[2,1491865,"INDEL","A","ATT","frameshift_variant","Vradi02g01610","protein EXPORTIN 1A","intracellular protein transport [GO:0006886]","nucleus [GO:0005634]","nuclear export signal receptor activity [GO:0005049]; small GTPase binding [GO:0031267]","nucleus [GO:0005634]; nuclear export signal receptor activity [GO:0005049]; small GTPase binding [GO:0031267]; intracellular protein transport [GO:0006886]"]
[2,1492362,"INDEL","CAGGTTCACATTCGCATCCTGGAATCCACTCAAGAGAATATAGCTGCTTTGCTTGTAGGCCTTGAATATCTTATCAACATTTCTTATGTTGATGATACTG","C","frameshift_variant&splice_acceptor_variant","Vradi02g01610","protein EXPORTIN 1A","intracellular protein transport [GO:0006886]","nucleus [GO:0005634]","nuclear export signal receptor activity [GO:0005049]; small GTPase binding [GO:0031267]","nucleus [GO:0005634]; nuclear export signal receptor activity [GO:0005049]; small GTPase binding [GO:0031267]; intracellular protein transport [GO:0006886]"]
[2,1543979,"INDEL","AT","A","frameshift_variant","Vradi02g01670","uncharacterized protein LOC106755784","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,1543982,"INDEL","A","AG","frameshift_variant","Vradi02g01670","uncharacterized protein LOC106755784","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,1987322,"SNP","A","T","stop_gained","Vradi02g02120","uncharacterized protein LOC106767898","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,2180522,"INDEL","CTG","C","frameshift_variant&stop_lost","Vradi02g02330","ENHANCER OF AG-4 protein 2","mRNA processing [GO:0006397]","-","-","mRNA processing [GO:0006397]"]
[2,2180528,"INDEL","AGTACATACAACTTACCCATG","A","frameshift_variant&stop_lost","Vradi02g02330","ENHANCER OF AG-4 protein 2","mRNA processing [GO:0006397]","-","-","mRNA processing [GO:0006397]"]
[2,2230785,"INDEL","G","GTA","splice_donor_variant","Vradi02g02380","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[2,2282199,"SNP","G","C","stop_gained","Vradi02g02430","general transcription factor 3C polypeptide 3 isoform X1","transcription by RNA polymerase III [GO:0006383]","-","-","transcription by RNA polymerase III [GO:0006383]"]
[2,2287237,"SNP","T","C","start_lost","Vradi02g02430","general transcription factor 3C polypeptide 3 isoform X1","transcription by RNA polymerase III [GO:0006383]","-","-","transcription by RNA polymerase III [GO:0006383]"]
[2,2293101,"INDEL","CT","C","frameshift_variant","Vradi02g02440","Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)","mitochondrial alanyl-tRNA aminoacylation [GO:0070143]","mitochondrion [GO:0005739]","alanine-tRNA ligase activity [GO:0004813]; ATP binding [GO:0005524]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]","mitochondrion [GO:0005739]; alanine-tRNA ligase activity [GO:0004813]; ATP binding [GO:0005524]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]; mitochondrial alanyl-tRNA aminoacylation [GO:0070143]"]
[2,2293109,"INDEL","TATCTCCTTTCTCTGGCACCCCAGCACAAATTACAGCCTTGTTTGTAG","T","frameshift_variant","Vradi02g02440","Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)","mitochondrial alanyl-tRNA aminoacylation [GO:0070143]","mitochondrion [GO:0005739]","alanine-tRNA ligase activity [GO:0004813]; ATP binding [GO:0005524]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]","mitochondrion [GO:0005739]; alanine-tRNA ligase activity [GO:0004813]; ATP binding [GO:0005524]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]; mitochondrial alanyl-tRNA aminoacylation [GO:0070143]"]
[2,2386455,"SNP","T","C","start_lost","Vradi02g02540","60S ribosomal protein L7a","ribosome biogenesis [GO:0042254]","cytosolic large ribosomal subunit [GO:0022625]","RNA binding [GO:0003723]","cytosolic large ribosomal subunit [GO:0022625]; RNA binding [GO:0003723]; ribosome biogenesis [GO:0042254]"]
[2,2495531,"INDEL","GAA","G","frameshift_variant","Vradi02g02680","eukaryotic translation initiation factor 4B3","-","-","translation initiation factor activity [GO:0003743]","translation initiation factor activity [GO:0003743]"]
[2,2495546,"INDEL","AG","A","frameshift_variant","Vradi02g02680","eukaryotic translation initiation factor 4B3","-","-","translation initiation factor activity [GO:0003743]","translation initiation factor activity [GO:0003743]"]
[2,2603675,"SNP","G","A","splice_acceptor_variant","Vradi02g02790","-","-","-","-","-"]
[2,2607229,"SNP","C","T","stop_gained","Vradi02g02800","protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like","-","-","-","-"]
[2,2607278,"SNP","C","A","stop_gained","Vradi02g02800","protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like","-","-","-","-"]
[2,2607281,"SNP","C","A","stop_gained","Vradi02g02800","protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like","-","-","-","-"]
[2,2608713,"INDEL","AACTCAAGGCTAAGAAATGAGTTATGTTATGGCAGCAAAAGAATTAGGACACCCTTTATATAG","A","frameshift_variant&stop_lost","Vradi02g02800","protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like","-","-","-","-"]
[2,2715613,"INDEL","C","CT","frameshift_variant","Vradi02g02940","uncharacterized protein LOC106776442","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,2715615,"SNP","C","A","stop_gained","Vradi02g02940","uncharacterized protein LOC106776442","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,2882342,"INDEL","C","CT","frameshift_variant","Vradi02g03050","kinesin-like protein KIN-7D, mitochondrial isoform X1","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[2,3358469,"SNP","G","A","splice_donor_variant","Vradi02g03470","HVA22-like protein","-","membrane [GO:0016020]","-","membrane [GO:0016020]"]
[2,3781420,"SNP","G","A","stop_gained","Vradi02g04080","calmodulin-like protein 7","-","-","calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]"]
[2,4019516,"SNP","A","T","splice_acceptor_variant","Vradi02g04250","cyanogenic beta-glucosidase-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[2,4019677,"SNP","G","A","splice_acceptor_variant","Vradi02g04250","cyanogenic beta-glucosidase-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[2,4019979,"INDEL","TATGG","T","frameshift_variant","Vradi02g04250","cyanogenic beta-glucosidase-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[2,4019994,"INDEL","C","CAA","frameshift_variant","Vradi02g04250","cyanogenic beta-glucosidase-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[2,4019999,"INDEL","T","TGA","frameshift_variant","Vradi02g04250","cyanogenic beta-glucosidase-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[2,4020350,"INDEL","GATGGTA","G","splice_donor_variant","Vradi02g04250","cyanogenic beta-glucosidase-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[2,4028379,"INDEL","C","CTGGCATT","splice_acceptor_variant","Vradi02g04260","Lipoxygenase (EC 1.13.11.-)","fatty acid biosynthetic process [GO:0006633]; oxylipin biosynthetic process [GO:0031408]","cytoplasm [GO:0005737]","metal ion binding [GO:0046872]; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [GO:0016702]","cytoplasm [GO:0005737]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [GO:0016702]; fatty acid biosynthetic process [GO:0006633]; oxylipin biosynthetic process [GO:0031408]"]
[2,4074550,"INDEL","A","AG","frameshift_variant","Vradi02g04310","IRK-interacting protein isoform X2","-","-","-","-"]
[2,4074552,"INDEL","C","CCA","frameshift_variant","Vradi02g04310","IRK-interacting protein isoform X2","-","-","-","-"]
[2,4080482,"INDEL","A","AT","frameshift_variant","Vradi02g04320","uncharacterized protein LOC106755696 isoform X2","-","-","-","-"]
[2,4231977,"INDEL","ATT","A","frameshift_variant&start_lost","Vradi02g04410","uncharacterized protein LOC106755670","cytochrome complex assembly [GO:0017004]; protein-heme linkage [GO:0017003]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","heme binding [GO:0020037]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; heme binding [GO:0020037]; cytochrome complex assembly [GO:0017004]; protein-heme linkage [GO:0017003]"]
[2,4373060,"SNP","G","C","stop_gained","Vradi02g04560","UDP-glucose iridoid glucosyltransferase","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[2,4395463,"SNP","A","T","start_lost","Vradi02g04590","uncharacterized protein LOC106755851 isoform X1","-","-","-","-"]
[2,4549703,"SNP","G","A","stop_gained","Vradi02g04680","LOW QUALITY PROTEIN: D-xylose-proton symporter-like 3, chloroplastic","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[2,4589147,"INDEL","T","TA","frameshift_variant","Vradi02g04720","transcription factor MYBC1-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[2,4631263,"SNP","G","T","stop_gained","Vradi02g04760","uncharacterized protein LOC106755977","-","-","-","-"]
[2,4645864,"INDEL","C","CCG","frameshift_variant","Vradi02g04780","uncharacterized protein C24B11.05","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[2,4645866,"INDEL","GCA","G","frameshift_variant","Vradi02g04780","uncharacterized protein C24B11.05","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[2,4646528,"INDEL","CCATGTGAATG","C","frameshift_variant&splice_acceptor_variant","Vradi02g04780","uncharacterized protein C24B11.05","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[2,4680490,"INDEL","TA","T","splice_donor_variant","Vradi02g04810","telomere repeat-binding protein 5 isoform X1","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[2,4710437,"SNP","A","T","splice_acceptor_variant","Vradi02g04860","tropinone reductase-like","-","-","-","-"]
[2,4721405,"INDEL","G","GA","frameshift_variant","Vradi02g04880","uncharacterized protein LOC106755887","-","-","-","-"]
[2,4721428,"INDEL","TC","T","frameshift_variant","Vradi02g04880","uncharacterized protein LOC106755887","-","-","-","-"]
[2,4721761,"INDEL","AC","A","frameshift_variant","Vradi02g04880","uncharacterized protein LOC106755887","-","-","-","-"]
[2,4767713,"SNP","G","A","stop_gained","Vradi02g04920","uncharacterized protein LOC106766037","-","clathrin-coated vesicle [GO:0030136]; Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]","-","clathrin-coated vesicle [GO:0030136]; Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]"]
[2,4900825,"INDEL","CA","C","frameshift_variant","Vradi02g05030","UDP-glucuronate decarboxylase (EC 4.1.1.35)","-","-","-","-"]
[2,4919057,"INDEL","AT","A","frameshift_variant","Vradi02g05050","LOW QUALITY PROTEIN: THO complex subunit 4A","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[2,4972077,"INDEL","CT","C","frameshift_variant","Vradi02g05120","uncharacterized protein LOC106758711","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,5112104,"INDEL","T","TA","frameshift_variant","Vradi02g05190","pentatricopeptide repeat-containing protein At1g07740, mitochondrial","-","-","-","-"]
[2,5161588,"SNP","C","T","stop_gained","Vradi02g05250","Exocyst subunit Exo70 family protein","exocytosis [GO:0006887]; protein transport [GO:0015031]","exocyst [GO:0000145]","-","exocyst [GO:0000145]; exocytosis [GO:0006887]; protein transport [GO:0015031]"]
[2,5597846,"SNP","G","A","stop_gained","Vradi02g05510","V-type proton ATPase subunit a","-","integral component of membrane [GO:0016021]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]","proton transmembrane transporter activity [GO:0015078]","integral component of membrane [GO:0016021]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]; proton transmembrane transporter activity [GO:0015078]"]
[2,5597930,"SNP","G","A","stop_gained","Vradi02g05510","V-type proton ATPase subunit a","-","integral component of membrane [GO:0016021]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]","proton transmembrane transporter activity [GO:0015078]","integral component of membrane [GO:0016021]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]; proton transmembrane transporter activity [GO:0015078]"]
[2,6103527,"INDEL","T","TC","frameshift_variant","Vradi02g05770","F-box/FBD/LRR-repeat protein At1g13570-like","-","-","-","-"]
[2,6103529,"INDEL","T","TG","frameshift_variant","Vradi02g05770","F-box/FBD/LRR-repeat protein At1g13570-like","-","-","-","-"]
[2,6955165,"INDEL","C","CAT","frameshift_variant","Vradi02g06310","protein EMBRYO DEFECTIVE 1674","-","-","-","-"]
[2,6955166,"INDEL","TG","T","frameshift_variant","Vradi02g06310","protein EMBRYO DEFECTIVE 1674","-","-","-","-"]
[2,7008046,"INDEL","A","AT","frameshift_variant","Vradi02g06370","pheophorbide a oxygenase, chloroplastic","-","chloroplast [GO:0009507]","2 iron, 2 sulfur cluster binding [GO:0051537]; chlorophyllide a oxygenase [overall] activity [GO:0010277]; metal ion binding [GO:0046872]","chloroplast [GO:0009507]; 2 iron, 2 sulfur cluster binding [GO:0051537]; chlorophyllide a oxygenase [overall] activity [GO:0010277]; metal ion binding [GO:0046872]"]
[2,7179974,"SNP","G","A","stop_gained","Vradi02g06470","aspartic proteinase-like protein 2 isoform X2","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[2,7195569,"SNP","G","A","splice_acceptor_variant","Vradi02g06480","SRSF protein kinase 1","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,7195585,"INDEL","CGATAT","CT","frameshift_variant","Vradi02g06480","SRSF protein kinase 1","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,7195591,"INDEL","TC","T","frameshift_variant","Vradi02g06480","SRSF protein kinase 1","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,7195594,"SNP","C","T","stop_gained","Vradi02g06480","SRSF protein kinase 1","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,7195644,"INDEL","A","AT","frameshift_variant","Vradi02g06480","SRSF protein kinase 1","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,7195649,"SNP","G","A","stop_gained","Vradi02g06480","SRSF protein kinase 1","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,7478618,"SNP","G","A","splice_acceptor_variant","Vradi02g06650","probable 2-carboxy-D-arabinitol-1-phosphatase","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[2,7478631,"INDEL","TTGGGTGG","T","frameshift_variant","Vradi02g06650","probable 2-carboxy-D-arabinitol-1-phosphatase","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[2,7478641,"INDEL","ATCAACCATTGAACATGCTTGGTGTCATACAGGTATTACATCCAATAATCAGAAATAGATGGGGAAAAGTTATTTCATCTGACCTTTTGCATGTAT","A","frameshift_variant&splice_donor_variant","Vradi02g06650","probable 2-carboxy-D-arabinitol-1-phosphatase","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[2,8384195,"SNP","C","T","splice_acceptor_variant","Vradi02g07100","probable WRKY transcription factor 31","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[2,9061179,"SNP","G","A","splice_donor_variant","Vradi02g07470","-","-","-","-","-"]
[2,9161993,"INDEL","TAGGTGA","T","splice_acceptor_variant","Vradi02g07530","-","-","-","-","-"]
[2,9162631,"INDEL","GTT","G","frameshift_variant","Vradi02g07530","-","-","-","-","-"]
[2,9162696,"INDEL","AT","A","frameshift_variant","Vradi02g07530","-","-","-","-","-"]
[2,9162732,"INDEL","CTT","C","frameshift_variant","Vradi02g07530","-","-","-","-","-"]
[2,9657591,"INDEL","CG","C","frameshift_variant","Vradi02g07820","uncharacterized protein LOC106777138","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","metal ion binding [GO:0046872]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]"]
[2,9768391,"INDEL","CA","C","frameshift_variant","Vradi02g07900","homeobox-leucine zipper protein HDG2 isoform X1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; lipid binding [GO:0008289]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; lipid binding [GO:0008289]"]
[2,9768986,"INDEL","TCTGCAAAAACAAAACACCCCCTTTAACGCACAACTCACAAAAAAGTTAAGGCAAAACCTAACACATGCACCACAGTCATACAGATATAC","T","splice_acceptor_variant&splice_donor_variant","Vradi02g07900","homeobox-leucine zipper protein HDG2 isoform X1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; lipid binding [GO:0008289]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; lipid binding [GO:0008289]"]
[2,9856032,"SNP","C","G","splice_donor_variant","Vradi02g07940","Isocitrate lyase","glyoxylate cycle [GO:0006097]; tricarboxylic acid cycle [GO:0006099]","glyoxysome [GO:0009514]","isocitrate lyase activity [GO:0004451]; metal ion binding [GO:0046872]","glyoxysome [GO:0009514]; isocitrate lyase activity [GO:0004451]; metal ion binding [GO:0046872]; glyoxylate cycle [GO:0006097]; tricarboxylic acid cycle [GO:0006099]"]
[2,10074353,"INDEL","AT","A","frameshift_variant","Vradi02g08060","uncharacterized protein LOC106755857","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,10230681,"SNP","A","G","splice_acceptor_variant","Vradi02g08120","-","-","-","-","-"]
[2,10230700,"INDEL","CAA","C","frameshift_variant","Vradi02g08120","-","-","-","-","-"]
[2,10247066,"INDEL","AC","A","frameshift_variant","Vradi02g08120","-","-","-","-","-"]
[2,10899372,"SNP","C","G","splice_donor_variant","Vradi02g08410","uncharacterized protein LOC106755780","-","-","-","-"]
[2,10982095,"INDEL","A","AT","frameshift_variant","Vradi02g08450","-","-","-","-","-"]
[2,11014008,"INDEL","T","TGATTTCA","frameshift_variant","Vradi02g08480","bifunctional epoxide hydrolase 2","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[2,11267081,"INDEL","G","GCA","frameshift_variant","Vradi02g08590","-","-","-","-","-"]
[2,11267083,"INDEL","GTA","G","frameshift_variant","Vradi02g08590","-","-","-","-","-"]
[2,11267242,"INDEL","A","AATGCT","frameshift_variant","Vradi02g08590","-","-","-","-","-"]
[2,11796618,"INDEL","CA","C","frameshift_variant","Vradi02g08850","receptor-like protein kinase 5","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,11849480,"SNP","G","T","start_lost","Vradi02g08880","WAT1-related protein At5g40210-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[2,11849489,"SNP","C","G","stop_gained","Vradi02g08880","WAT1-related protein At5g40210-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[2,11849734,"INDEL","C","CT","frameshift_variant","Vradi02g08880","WAT1-related protein At5g40210-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[2,12013938,"INDEL","TATGAACTATTATTTTTCCTGCAGGAGGATAAAACAACTGTCATTTCCCAC","T","splice_acceptor_variant","Vradi02g08930","villin-1-like isoform X2","actin filament severing [GO:0051014]","-","actin filament binding [GO:0051015]","actin filament binding [GO:0051015]; actin filament severing [GO:0051014]"]
[2,12014030,"INDEL","G","GGT","frameshift_variant","Vradi02g08930","villin-1-like isoform X2","actin filament severing [GO:0051014]","-","actin filament binding [GO:0051015]","actin filament binding [GO:0051015]; actin filament severing [GO:0051014]"]
[2,12014183,"INDEL","C","CGT","frameshift_variant&stop_gained","Vradi02g08930","villin-1-like isoform X2","actin filament severing [GO:0051014]","-","actin filament binding [GO:0051015]","actin filament binding [GO:0051015]; actin filament severing [GO:0051014]"]
[2,12014322,"SNP","G","C","splice_donor_variant","Vradi02g08930","villin-1-like isoform X2","actin filament severing [GO:0051014]","-","actin filament binding [GO:0051015]","actin filament binding [GO:0051015]; actin filament severing [GO:0051014]"]
[2,12507522,"SNP","G","A","stop_gained","Vradi02g09030","-","-","-","-","-"]
[2,12771243,"SNP","G","A","stop_gained","Vradi02g09050","probable terpene synthase 11","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,12771357,"INDEL","A","AAT","frameshift_variant","Vradi02g09050","probable terpene synthase 11","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,12844896,"INDEL","TGTTGCAGGAG","T","splice_acceptor_variant&splice_donor_variant","Vradi02g09060","-","-","-","-","-"]
[2,12846799,"INDEL","A","AT","frameshift_variant","Vradi02g09060","-","-","-","-","-"]
[2,12943989,"INDEL","CAG","C","frameshift_variant","Vradi02g09080","-","-","-","-","-"]
[2,12944274,"SNP","A","T","stop_gained","Vradi02g09080","-","-","-","-","-"]
[2,12944580,"INDEL","GGGCAACTCAAA","G","frameshift_variant","Vradi02g09080","-","-","-","-","-"]
[2,12944604,"INDEL","AG","A","frameshift_variant","Vradi02g09080","-","-","-","-","-"]
[2,12974987,"INDEL","A","AAG","frameshift_variant","Vradi02g09090","LOW QUALITY PROTEIN: probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,12974999,"INDEL","C","CA","frameshift_variant","Vradi02g09090","LOW QUALITY PROTEIN: probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,12975011,"INDEL","T","TTACG","frameshift_variant","Vradi02g09090","LOW QUALITY PROTEIN: probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,12975037,"INDEL","GTATA","G","frameshift_variant","Vradi02g09090","LOW QUALITY PROTEIN: probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,12975073,"INDEL","ATTGAAGAAGGGTGTGT","A","frameshift_variant","Vradi02g09090","LOW QUALITY PROTEIN: probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,13260447,"INDEL","A","AGCCCATGGTG","frameshift_variant","Vradi02g09100","AP-5 complex subunit zeta-1 isoform X2","-","AP-5 adaptor complex [GO:0044599]","-","AP-5 adaptor complex [GO:0044599]"]
[2,13260759,"INDEL","C","CTG","frameshift_variant","Vradi02g09100","AP-5 complex subunit zeta-1 isoform X2","-","AP-5 adaptor complex [GO:0044599]","-","AP-5 adaptor complex [GO:0044599]"]
[2,13263066,"SNP","C","T","stop_gained","Vradi02g09100","AP-5 complex subunit zeta-1 isoform X2","-","AP-5 adaptor complex [GO:0044599]","-","AP-5 adaptor complex [GO:0044599]"]
[2,13371470,"INDEL","ATGCACAACCAAAAG","A","stop_lost","Vradi02g09120","-","-","-","-","-"]
[2,13371487,"INDEL","AAAGGAGAAGAAGAGGG","A","frameshift_variant","Vradi02g09120","-","-","-","-","-"]
[2,13371599,"SNP","T","A","stop_gained","Vradi02g09120","-","-","-","-","-"]
[2,13371650,"SNP","G","A","stop_gained","Vradi02g09120","-","-","-","-","-"]
[2,13373294,"SNP","T","G","stop_gained","Vradi02g09130","probable serine/threonine-protein kinase abkC isoform X1","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[2,13405323,"SNP","C","A","stop_gained","Vradi02g09140","-","-","-","-","-"]
[2,13468686,"INDEL","TC","T","frameshift_variant","Vradi02g09160","-","-","-","-","-"]
[2,13710727,"INDEL","CA","C","frameshift_variant","Vradi02g09190","uncharacterized protein LOC106756095 isoform X2","-","-","-","-"]
[2,13710730,"INDEL","A","AT","frameshift_variant","Vradi02g09190","uncharacterized protein LOC106756095 isoform X2","-","-","-","-"]
[2,13721071,"INDEL","CCAAAGCCTTTTTAAATCTCAAGGCCAACCCCAAACACTCCCCAAAA","C","frameshift_variant","Vradi02g09200","protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3","-","-","-","-"]
[2,13721732,"INDEL","G","GGT","frameshift_variant","Vradi02g09200","protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3","-","-","-","-"]
[2,13722643,"SNP","C","A","splice_donor_variant","Vradi02g09200","protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3","-","-","-","-"]
[2,13723477,"SNP","C","T","splice_acceptor_variant","Vradi02g09200","protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3","-","-","-","-"]
[2,13885554,"INDEL","CAT","C","frameshift_variant","Vradi02g09230","TMV resistance protein N-like isoform X1","signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; signal transduction [GO:0007165]"]
[2,13885558,"INDEL","A","ACG","frameshift_variant","Vradi02g09230","TMV resistance protein N-like isoform X1","signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; signal transduction [GO:0007165]"]
[2,13886230,"INDEL","CTT","C","frameshift_variant","Vradi02g09230","TMV resistance protein N-like isoform X1","signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; signal transduction [GO:0007165]"]
[2,13886233,"INDEL","C","CAG","frameshift_variant","Vradi02g09230","TMV resistance protein N-like isoform X1","signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; signal transduction [GO:0007165]"]
[2,14055391,"SNP","G","A","stop_gained","Vradi02g09270","-","-","-","-","-"]
[2,14141379,"INDEL","AATTG","A","frameshift_variant","Vradi02g09280","TMV resistance protein N isoform X1","signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; signal transduction [GO:0007165]"]
[2,14141384,"INDEL","G","GCCGT","frameshift_variant","Vradi02g09280","TMV resistance protein N isoform X1","signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; signal transduction [GO:0007165]"]
[2,14142395,"SNP","G","T","stop_gained","Vradi02g09280","TMV resistance protein N isoform X1","signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; signal transduction [GO:0007165]"]
[2,14263180,"SNP","T","C","splice_donor_variant","Vradi02g09340","TBC1 domain family member 15","-","-","-","-"]
[2,14334895,"SNP","C","T","splice_acceptor_variant","Vradi02g09360","protein translation factor SUI1 homolog","-","-","translation initiation factor activity [GO:0003743]","translation initiation factor activity [GO:0003743]"]
[2,14335148,"INDEL","T","TC","frameshift_variant","Vradi02g09360","protein translation factor SUI1 homolog","-","-","translation initiation factor activity [GO:0003743]","translation initiation factor activity [GO:0003743]"]
[2,14429276,"SNP","T","A","stop_gained","Vradi02g09390","-","-","-","-","-"]
[2,14436983,"INDEL","G","GT","frameshift_variant","Vradi02g09400","ABC transporter B family member 15-like","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[2,14443146,"SNP","A","G","splice_acceptor_variant","Vradi02g09410","uncharacterized protein LOC111241860","recombinational repair [GO:0000725]","-","-","recombinational repair [GO:0000725]"]
[2,14559673,"INDEL","C","CA","frameshift_variant","Vradi02g09450","-","-","-","-","-"]
[2,14560604,"INDEL","A","AT","frameshift_variant","Vradi02g09450","-","-","-","-","-"]
[2,14620736,"INDEL","G","GAA","frameshift_variant","Vradi02g09460","autophagy-related protein 18f","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,14620738,"INDEL","T","TA","frameshift_variant","Vradi02g09460","autophagy-related protein 18f","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,14687111,"INDEL","GCC","G","frameshift_variant","Vradi02g09490","-","-","-","-","-"]
[2,14687115,"INDEL","A","AT","frameshift_variant","Vradi02g09490","-","-","-","-","-"]
[2,14687117,"INDEL","G","GA","frameshift_variant","Vradi02g09490","-","-","-","-","-"]
[2,14689129,"SNP","A","G","start_lost","Vradi02g09490","-","-","-","-","-"]
[2,14840715,"SNP","C","A","stop_gained","Vradi02g09520","F-box protein MAX2","auxin polar transport [GO:0009926]; cuticle development [GO:0042335]; negative regulation of seed germination [GO:0010187]; positive regulation of response to water deprivation [GO:1902584]; regulation of meristem structural organization [GO:0009934]; regulation of shoot system morphogenesis [GO:1900618]; response to light stimulus [GO:0009416]; response to water deprivation [GO:0009414]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; shoot system morphogenesis [GO:0010016]","nucleus [GO:0005634]; SCF ubiquitin ligase complex [GO:0019005]","-","nucleus [GO:0005634]; SCF ubiquitin ligase complex [GO:0019005]; auxin polar transport [GO:0009926]; cuticle development [GO:0042335]; negative regulation of seed germination [GO:0010187]; positive regulation of response to water deprivation [GO:1902584]; regulation of meristem structural organization [GO:0009934]; regulation of shoot system morphogenesis [GO:1900618]; response to light stimulus [GO:0009416]; response to water deprivation [GO:0009414]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]; shoot system morphogenesis [GO:0010016]"]
[2,15244744,"INDEL","TG","T","frameshift_variant","Vradi02g09580","sec1 family domain-containing protein MIP3","vesicle-mediated transport [GO:0016192]","-","-","vesicle-mediated transport [GO:0016192]"]
[2,15275717,"SNP","G","A","stop_gained","Vradi02g09590","uncharacterized protein LOC106754751","-","-","-","-"]
[2,15385451,"SNP","A","C","splice_acceptor_variant","Vradi02g09620","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[2,15385806,"INDEL","GGTCATTATTTATGTGTTTTCTTGTAGGTTCTC","G","splice_acceptor_variant","Vradi02g09620","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[2,15731306,"SNP","A","C","stop_lost","Vradi02g09730","protein FAR1-RELATED SEQUENCE 2-like","-","-","-","-"]
[2,15731886,"SNP","G","T","stop_gained","Vradi02g09740","Protein FAR1-RELATED SEQUENCE","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","zinc ion binding [GO:0008270]","nucleus [GO:0005634]; zinc ion binding [GO:0008270]; regulation of transcription, DNA-templated [GO:0006355]"]
[2,15737273,"INDEL","GT","G","frameshift_variant","Vradi02g09750","uncharacterized protein LOC106755080","-","-","-","-"]
[2,15825429,"INDEL","C","CT","frameshift_variant","Vradi02g09790","-","-","-","-","-"]
[2,15899813,"INDEL","TGAGGACA","T","frameshift_variant","Vradi02g09810","Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8)","-","nucleus [GO:0005634]","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; RNA binding [GO:0003723]; zinc ion binding [GO:0008270]","nucleus [GO:0005634]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; RNA binding [GO:0003723]; zinc ion binding [GO:0008270]"]
[2,15918330,"INDEL","TTGAAGCGGATTGATCTGTTATCTCCAAGTGATCGTCTACCAAAAACCCTAACTCTTCTTCTATAGTCATACTCAAATTCAGCACCTATATCATCCTC","T","frameshift_variant","Vradi02g09820","inactive protein RESTRICTED TEV MOVEMENT 2-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,15918431,"SNP","A","T","stop_gained","Vradi02g09820","inactive protein RESTRICTED TEV MOVEMENT 2-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,15918442,"INDEL","G","GA","frameshift_variant","Vradi02g09820","inactive protein RESTRICTED TEV MOVEMENT 2-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,15930561,"SNP","G","A","stop_gained","Vradi02g09830","-","-","-","-","-"]
[2,15930766,"SNP","G","A","splice_donor_variant","Vradi02g09830","-","-","-","-","-"]
[2,15931525,"INDEL","AT","A","frameshift_variant","Vradi02g09830","-","-","-","-","-"]
[2,15931628,"INDEL","TATTATAGAGTTACTATTGTTTGGATTATTAATTTTCAGGGCACAA","T","frameshift_variant&splice_acceptor_variant","Vradi02g09830","-","-","-","-","-"]
[2,15931682,"INDEL","TGCTTC","T","frameshift_variant","Vradi02g09830","-","-","-","-","-"]
[2,15932129,"SNP","G","A","splice_acceptor_variant","Vradi02g09830","-","-","-","-","-"]
[2,15934601,"SNP","C","T","stop_gained","Vradi02g09840","-","-","-","-","-"]
[2,15934761,"SNP","T","C","splice_acceptor_variant","Vradi02g09840","-","-","-","-","-"]
[2,15935341,"SNP","C","T","splice_donor_variant","Vradi02g09840","-","-","-","-","-"]
[2,15935378,"SNP","G","C","stop_gained","Vradi02g09840","-","-","-","-","-"]
[2,15935442,"SNP","C","A","stop_gained","Vradi02g09840","-","-","-","-","-"]
[2,16046388,"SNP","T","A","stop_gained","Vradi02g09880","choline transporter protein 1","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[2,16325342,"INDEL","A","AT","frameshift_variant","Vradi02g10010","-","-","-","-","-"]
[2,16744269,"SNP","C","T","stop_gained","Vradi02g10100","UBP1-associated protein 2C","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[2,16744319,"INDEL","C","CA","frameshift_variant","Vradi02g10100","UBP1-associated protein 2C","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[2,16744378,"SNP","T","C","splice_acceptor_variant","Vradi02g10100","UBP1-associated protein 2C","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[2,16957632,"SNP","C","T","stop_gained","Vradi02g10180","-","-","-","-","-"]
[2,17082247,"INDEL","CTT","C","frameshift_variant","Vradi02g10210","uncharacterized protein LOC106755172 isoform X1","-","-","-","-"]
[2,17099713,"INDEL","ATTAAGAAATTTATCCTT","A","frameshift_variant&splice_acceptor_variant","Vradi02g10220","polynucleotide 3'-phosphatase ZDP isoform X3","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; zinc ion binding [GO:0008270]","nucleus [GO:0005634]; DNA binding [GO:0003677]; zinc ion binding [GO:0008270]"]
[2,17146834,"SNP","G","A","splice_acceptor_variant","Vradi02g10240","uncharacterized protein LOC106776295","-","-","-","-"]
[2,17163331,"SNP","C","A","stop_gained","Vradi02g10250","ATP-dependent zinc metalloprotease FTSH 10, mitochondrial isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[2,17269139,"SNP","A","T","stop_gained","Vradi02g10290","extensin","-","-","electron transfer activity [GO:0009055]","electron transfer activity [GO:0009055]"]
[2,17269161,"INDEL","GTCAAATAAATGTCACGGT","G","stop_gained","Vradi02g10290","extensin","-","-","electron transfer activity [GO:0009055]","electron transfer activity [GO:0009055]"]
[2,17269241,"INDEL","AG","A","frameshift_variant","Vradi02g10290","extensin","-","-","electron transfer activity [GO:0009055]","electron transfer activity [GO:0009055]"]
[2,17384077,"INDEL","GT","G","frameshift_variant","Vradi02g10320","-","-","-","-","-"]
[2,17384318,"SNP","G","A","stop_gained","Vradi02g10320","-","-","-","-","-"]
[2,17398589,"SNP","G","C","splice_donor_variant","Vradi02g10330","-","-","-","-","-"]
[2,17399658,"SNP","G","A","splice_acceptor_variant","Vradi02g10330","-","-","-","-","-"]
[2,17524638,"INDEL","CAGG","C","frameshift_variant&splice_acceptor_variant","Vradi02g10380","protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2","-","nucleus [GO:0005634]","chromatin binding [GO:0003682]; DNA binding [GO:0003677]","nucleus [GO:0005634]; chromatin binding [GO:0003682]; DNA binding [GO:0003677]"]
[2,17692760,"INDEL","AG","A","frameshift_variant","Vradi02g10430","uncharacterized protein LOC106755572","cell redox homeostasis [GO:0045454]; glycerol ether metabolic process [GO:0006662]","-","protein disulfide oxidoreductase activity [GO:0015035]","protein disulfide oxidoreductase activity [GO:0015035]; cell redox homeostasis [GO:0045454]; glycerol ether metabolic process [GO:0006662]"]
[2,17905451,"INDEL","C","CT","frameshift_variant&stop_gained","Vradi02g10500","protein IQ-DOMAIN 1 isoform X2","-","-","-","-"]
[2,17907940,"INDEL","AATTCTCTCTGCCACACT","A","frameshift_variant&splice_acceptor_variant","Vradi02g10500","protein IQ-DOMAIN 1 isoform X2","-","-","-","-"]
[2,17963236,"SNP","C","A","stop_gained","Vradi02g10530","uncharacterized exonuclease domain-containing protein At3g15140","-","-","exonuclease activity [GO:0004527]; nucleic acid binding [GO:0003676]","exonuclease activity [GO:0004527]; nucleic acid binding [GO:0003676]"]
[2,17985739,"INDEL","C","CA","frameshift_variant","Vradi02g10540","uncharacterized protein LOC106777859 isoform X2","-","-","-","-"]
[2,17986017,"SNP","C","A","stop_gained","Vradi02g10540","uncharacterized protein LOC106777859 isoform X2","-","-","-","-"]
[2,18038694,"INDEL","A","ATGT","start_lost","Vradi02g10550","-","-","-","-","-"]
[2,18061078,"SNP","G","A","stop_gained","Vradi02g10570","G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X4","-","-","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine/threonine kinase activity [GO:0004674]"]
[2,18061109,"INDEL","AT","A","frameshift_variant","Vradi02g10570","G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X4","-","-","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine/threonine kinase activity [GO:0004674]"]
[2,18135606,"SNP","C","G","splice_donor_variant","Vradi02g10590","-","-","-","-","-"]
[2,18136002,"SNP","C","A","splice_acceptor_variant","Vradi02g10590","-","-","-","-","-"]
[2,18136734,"INDEL","TC","T","frameshift_variant","Vradi02g10590","-","-","-","-","-"]
[2,18136738,"INDEL","TGCAC","T","frameshift_variant","Vradi02g10590","-","-","-","-","-"]
[2,18357202,"INDEL","CGA","C","frameshift_variant","Vradi02g10680","uncharacterized protein LOC106752852","-","-","-","-"]
[2,18606409,"INDEL","GAGGT","G","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606415,"INDEL","A","AC","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606418,"INDEL","GTTCAA","G","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606434,"INDEL","T","TC","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606438,"INDEL","TCG","T","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606442,"INDEL","GCGGAA","G","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606449,"INDEL","TG","T","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606457,"INDEL","T","TTC","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606476,"INDEL","AGT","A","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18606491,"INDEL","C","CG","frameshift_variant","Vradi02g10720","albumin-1-like","-","-","-","-"]
[2,18686966,"INDEL","TG","T","frameshift_variant&start_lost","Vradi02g10730","ankyrin repeat-containing protein BDA1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18687552,"INDEL","G","GGTAT","splice_donor_variant","Vradi02g10730","ankyrin repeat-containing protein BDA1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18687802,"INDEL","AT","A","frameshift_variant","Vradi02g10730","ankyrin repeat-containing protein BDA1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18687807,"INDEL","A","AT","frameshift_variant&stop_gained","Vradi02g10730","ankyrin repeat-containing protein BDA1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18687839,"INDEL","GAGAGT","G","frameshift_variant","Vradi02g10730","ankyrin repeat-containing protein BDA1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18687851,"INDEL","TTAGAAAAACTGGTATGAGGGGGAAG","T","frameshift_variant","Vradi02g10730","ankyrin repeat-containing protein BDA1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18687863,"INDEL","GTA","G","frameshift_variant","Vradi02g10730","ankyrin repeat-containing protein BDA1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18699159,"SNP","T","C","stop_lost","Vradi02g10740","-","-","-","-","-"]
[2,18699161,"SNP","A","G","stop_lost","Vradi02g10740","-","-","-","-","-"]
[2,18742629,"INDEL","AAC","A","frameshift_variant","Vradi02g10750","anaphase-promoting complex subunit 6 isoform X2","-","-","-","-"]
[2,18811862,"SNP","A","T","start_lost","Vradi02g10770","protein GRAVITROPIC IN THE LIGHT 1 isoform X2","negative gravitropism [GO:0009959]; response to red or far red light [GO:0009639]","-","-","negative gravitropism [GO:0009959]; response to red or far red light [GO:0009639]"]
[2,18883957,"SNP","A","G","stop_lost","Vradi02g10780","-","-","-","-","-"]
[2,18884066,"INDEL","TTCAACAACCTCTTCATATTCAGGATGAATAATTTGGTCGATAGGCATAGTTAAGTTTCTTCCATCAA","T","frameshift_variant","Vradi02g10780","-","-","-","-","-"]
[2,18884685,"INDEL","T","TA","frameshift_variant","Vradi02g10780","-","-","-","-","-"]
[2,18887704,"SNP","T","A","start_lost","Vradi02g10790","cytochrome P450 72A15-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[2,18887744,"INDEL","C","CT","frameshift_variant","Vradi02g10790","cytochrome P450 72A15-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[2,18913316,"INDEL","AATGCCTGGTCCAAGTGGCGTCGCCACCTCCTCCGCATCGTCTTCGTGCTCCACCACATGCATGACTTTTACAGGGAGGTTATGGGCG","A","frameshift_variant&splice_donor_variant","Vradi02g10820","uncharacterized protein LOC111241293 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18913586,"SNP","C","T","stop_gained","Vradi02g10820","uncharacterized protein LOC111241293 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18914776,"INDEL","C","CAT","frameshift_variant","Vradi02g10820","uncharacterized protein LOC111241293 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18914996,"INDEL","G","GTGGAGACTGT","frameshift_variant","Vradi02g10820","uncharacterized protein LOC111241293 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18915086,"INDEL","CTATTACAGGTTTAAATTCTTAATCTTTTG","C","frameshift_variant&splice_donor_variant","Vradi02g10820","uncharacterized protein LOC111241293 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18916068,"SNP","T","A","splice_donor_variant","Vradi02g10820","uncharacterized protein LOC111241293 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,18916187,"INDEL","T","TGCCTGACACC","frameshift_variant","Vradi02g10820","uncharacterized protein LOC111241293 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,19552335,"SNP","T","G","stop_lost","Vradi02g10850","-","-","-","-","-"]
[2,19563515,"SNP","C","T","splice_donor_variant","Vradi02g10860","-","-","-","-","-"]
[2,19827166,"INDEL","ACT","A","frameshift_variant","Vradi02g10900","probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,19827455,"INDEL","GT","G","frameshift_variant","Vradi02g10900","probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,19827510,"INDEL","ACT","A","frameshift_variant","Vradi02g10900","probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,19827568,"SNP","C","T","stop_gained","Vradi02g10900","probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,19827675,"SNP","C","T","splice_donor_variant","Vradi02g10900","probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,19828041,"SNP","G","T","stop_gained","Vradi02g10900","probable terpene synthase 2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,19832633,"INDEL","C","CT","frameshift_variant","Vradi02g10910","-","-","-","-","-"]
[2,19832681,"SNP","C","A","splice_acceptor_variant","Vradi02g10910","-","-","-","-","-"]
[2,19832862,"INDEL","GCATAAATTAACCCCCGACC","G","frameshift_variant&splice_donor_variant","Vradi02g10910","-","-","-","-","-"]
[2,19988522,"INDEL","A","ATT","frameshift_variant","Vradi02g10930","-","-","-","-","-"]
[2,19991490,"SNP","A","G","splice_donor_variant","Vradi02g10930","-","-","-","-","-"]
[2,20377447,"INDEL","A","AG","frameshift_variant","Vradi02g10990","(-)-germacrene D synthase-like isoform X2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,20379390,"INDEL","C","CT","frameshift_variant","Vradi02g10990","(-)-germacrene D synthase-like isoform X2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[2,20398786,"INDEL","G","GTA","frameshift_variant","Vradi02g11000","-","-","-","-","-"]
[2,20398904,"SNP","C","T","stop_gained","Vradi02g11000","-","-","-","-","-"]
[2,20665123,"SNP","G","A","stop_gained","Vradi02g11020","putative cysteine-rich receptor-like protein kinase 12","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[2,20665124,"SNP","G","A","stop_gained","Vradi02g11020","putative cysteine-rich receptor-like protein kinase 12","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[2,20665302,"SNP","C","T","stop_gained","Vradi02g11020","putative cysteine-rich receptor-like protein kinase 12","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[2,20932638,"INDEL","T","TAA","frameshift_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20932696,"SNP","G","A","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20932911,"SNP","G","C","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20933062,"SNP","G","A","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20933083,"SNP","C","A","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20933088,"SNP","C","T","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20933168,"SNP","C","T","splice_acceptor_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20933273,"SNP","G","T","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20936963,"SNP","C","T","splice_donor_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20937208,"SNP","G","A","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20937232,"INDEL","C","CATTCTTGA","frameshift_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20937314,"SNP","C","T","splice_acceptor_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20937413,"INDEL","C","CA","frameshift_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20937465,"INDEL","A","AATCCTAAGTCTCCTTCACTGCTTTCACTTTT","frameshift_variant&stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20937826,"SNP","C","T","splice_acceptor_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20938125,"SNP","C","T","splice_acceptor_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20941093,"SNP","A","C","stop_gained","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20941499,"SNP","T","C","splice_acceptor_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20941711,"INDEL","C","CA","frameshift_variant","Vradi02g11150","F-box/kelch-repeat protein At3g23880-like","-","-","-","-"]
[2,20942609,"INDEL","AG","A","frameshift_variant","Vradi02g11160","-","-","-","-","-"]
[2,20987233,"SNP","A","T","stop_gained","Vradi02g11190","-","-","-","-","-"]
[2,21057892,"SNP","G","A","stop_gained","Vradi02g11220","ultraviolet-B receptor UVR8","-","-","-","-"]
[2,21057893,"SNP","A","T","stop_gained","Vradi02g11220","ultraviolet-B receptor UVR8","-","-","-","-"]
[2,21086000,"INDEL","A","AG","frameshift_variant","Vradi02g11240","probable serine/threonine-protein kinase PBL9","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,21223399,"SNP","G","A","stop_gained","Vradi02g11290","-","-","-","-","-"]
[2,21260997,"INDEL","GA","G","frameshift_variant","Vradi02g11300","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[2,21327769,"INDEL","GTTGTA","G","frameshift_variant","Vradi02g11330","Recombinase A protein (Fragment)","DNA recombination [GO:0006310]; DNA repair [GO:0006281]","-","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]"]
[2,21327838,"INDEL","GT","G","frameshift_variant","Vradi02g11330","Recombinase A protein (Fragment)","DNA recombination [GO:0006310]; DNA repair [GO:0006281]","-","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]"]
[2,21327862,"INDEL","TA","T","frameshift_variant","Vradi02g11330","Recombinase A protein (Fragment)","DNA recombination [GO:0006310]; DNA repair [GO:0006281]","-","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]"]
[2,21423531,"INDEL","AGG","A","frameshift_variant","Vradi02g11380","pentatricopeptide repeat-containing protein At1g03560, mitochondrial","-","-","-","-"]
[2,21423536,"INDEL","T","TCA","frameshift_variant","Vradi02g11380","pentatricopeptide repeat-containing protein At1g03560, mitochondrial","-","-","-","-"]
[2,21423545,"INDEL","ACCAGG","A","frameshift_variant","Vradi02g11380","pentatricopeptide repeat-containing protein At1g03560, mitochondrial","-","-","-","-"]
[2,21466138,"INDEL","C","CA","frameshift_variant","Vradi02g11410","LRR receptor-like serine/threonine-protein kinase ERECTA","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[2,21469406,"INDEL","C","CA","frameshift_variant","Vradi02g11410","LRR receptor-like serine/threonine-protein kinase ERECTA","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[2,21469544,"INDEL","TAC","T","splice_donor_variant","Vradi02g11410","LRR receptor-like serine/threonine-protein kinase ERECTA","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[2,21565720,"INDEL","G","GTTGTTAGTGT","frameshift_variant&stop_gained","Vradi02g11480","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[2,21578398,"SNP","C","T","stop_gained","Vradi02g11490","-","-","-","-","-"]
[2,21580687,"SNP","G","A","stop_gained","Vradi02g11490","-","-","-","-","-"]
[2,21598137,"INDEL","A","AG","frameshift_variant","Vradi02g11500","uncharacterized protein LOC106778288","-","-","-","-"]
[2,21603399,"INDEL","CA","C","frameshift_variant","Vradi02g11500","uncharacterized protein LOC106778288","-","-","-","-"]
[2,21666017,"SNP","C","T","stop_gained","Vradi02g11520","protein KINESIN LIGHT CHAIN-RELATED 2-like","-","-","-","-"]
[2,21817968,"INDEL","TGGGTGCTGCTGGCACGCCCACGA","T","frameshift_variant","Vradi02g11570","hevamine-A-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[2,21835264,"INDEL","CT","C","frameshift_variant","Vradi02g11580","-","-","-","-","-"]
[2,21835605,"SNP","G","A","stop_gained","Vradi02g11580","-","-","-","-","-"]
[2,21835626,"INDEL","G","GT","frameshift_variant","Vradi02g11580","-","-","-","-","-"]
[2,21886855,"INDEL","GAAAATAAGTAAACTGA","G","splice_acceptor_variant&splice_donor_variant","Vradi02g11600","-","-","-","-","-"]
[2,21889195,"SNP","A","C","splice_donor_variant","Vradi02g11600","-","-","-","-","-"]
[2,21889199,"INDEL","GACTTGCTTGCTTCATCATTTTCATAGCAAATA","G","start_lost","Vradi02g11600","-","-","-","-","-"]
[2,21891395,"INDEL","GA","GAA","frameshift_variant","Vradi02g11610","-","-","-","-","-"]
[2,21892023,"SNP","G","A","stop_gained","Vradi02g11610","-","-","-","-","-"]
[2,22051425,"SNP","T","C","stop_lost","Vradi02g11660","-","-","-","-","-"]
[2,22051454,"INDEL","GC","G","frameshift_variant","Vradi02g11660","-","-","-","-","-"]
[2,22051523,"SNP","G","A","stop_gained","Vradi02g11660","-","-","-","-","-"]
[2,22051644,"SNP","A","T","stop_gained","Vradi02g11660","-","-","-","-","-"]
[2,22436905,"SNP","G","A","stop_gained","Vradi02g12180","two-component response regulator ORR26-like isoform X2","phosphorelay signal transduction system [GO:0000160]","nucleus [GO:0005634]","DNA binding [GO:0003677]; kinase activity [GO:0016301]","nucleus [GO:0005634]; DNA binding [GO:0003677]; kinase activity [GO:0016301]; phosphorelay signal transduction system [GO:0000160]"]
[2,22437302,"INDEL","TG","T","frameshift_variant","Vradi02g12180","two-component response regulator ORR26-like isoform X2","phosphorelay signal transduction system [GO:0000160]","nucleus [GO:0005634]","DNA binding [GO:0003677]; kinase activity [GO:0016301]","nucleus [GO:0005634]; DNA binding [GO:0003677]; kinase activity [GO:0016301]; phosphorelay signal transduction system [GO:0000160]"]
[2,22437379,"SNP","C","A","stop_gained","Vradi02g12180","two-component response regulator ORR26-like isoform X2","phosphorelay signal transduction system [GO:0000160]","nucleus [GO:0005634]","DNA binding [GO:0003677]; kinase activity [GO:0016301]","nucleus [GO:0005634]; DNA binding [GO:0003677]; kinase activity [GO:0016301]; phosphorelay signal transduction system [GO:0000160]"]
[2,22437393,"INDEL","TCCACG","T","frameshift_variant","Vradi02g12180","two-component response regulator ORR26-like isoform X2","phosphorelay signal transduction system [GO:0000160]","nucleus [GO:0005634]","DNA binding [GO:0003677]; kinase activity [GO:0016301]","nucleus [GO:0005634]; DNA binding [GO:0003677]; kinase activity [GO:0016301]; phosphorelay signal transduction system [GO:0000160]"]
[2,22574394,"INDEL","GTCTGC","G","frameshift_variant&splice_acceptor_variant","Vradi02g12360","-","-","-","-","-"]
[2,22648407,"INDEL","AC","A","frameshift_variant","Vradi02g12450","RING-H2 finger protein ATL2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,22648493,"SNP","C","T","stop_gained","Vradi02g12450","RING-H2 finger protein ATL2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,22648936,"INDEL","A","AAG","frameshift_variant","Vradi02g12450","RING-H2 finger protein ATL2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,22649385,"INDEL","GC","G","frameshift_variant","Vradi02g12450","RING-H2 finger protein ATL2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,22649387,"SNP","C","T","stop_gained","Vradi02g12450","RING-H2 finger protein ATL2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,22649645,"SNP","C","T","stop_gained","Vradi02g12450","RING-H2 finger protein ATL2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,23096285,"INDEL","C","CA","frameshift_variant","Vradi02g12840","NADPH-dependent 1-acyldihydroxyacetone phosphate reductase","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[2,23126460,"SNP","T","A","splice_acceptor_variant","Vradi02g12870","uncharacterized protein LOC106756537 isoform X2","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[2,23305212,"INDEL","GCTCT","GCT","frameshift_variant","Vradi02g13110","probably inactive leucine-rich repeat receptor-like protein kinase IMK2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[2,23628342,"INDEL","G","GGTGT","frameshift_variant","Vradi02g13380","tudor domain-containing protein 3","-","-","-","-"]
[2,23628343,"INDEL","C","CGGCGTTGTTAA","frameshift_variant","Vradi02g13380","tudor domain-containing protein 3","-","-","-","-"]
[2,23651876,"INDEL","T","TCATGCTTA","splice_acceptor_variant","Vradi02g13420","(1->3)-beta-glucan endohydrolase (EC 3.2.1.39) (Beta-1,3-endoglucanase)","carbohydrate metabolic process [GO:0005975]","-","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]; carbohydrate metabolic process [GO:0005975]"]
[2,23655348,"INDEL","T","TTGTACTGGTGCAACATTTTTAGTGATTGTACGTCTCCCTTGAATATAAGCCCGGA","frameshift_variant&stop_gained","Vradi02g13430","protein DENND6A-like","-","-","guanyl-nucleotide exchange factor activity [GO:0005085]","guanyl-nucleotide exchange factor activity [GO:0005085]"]
[2,23664447,"SNP","C","T","splice_acceptor_variant","Vradi02g13430","protein DENND6A-like","-","-","guanyl-nucleotide exchange factor activity [GO:0005085]","guanyl-nucleotide exchange factor activity [GO:0005085]"]
[2,24157000,"INDEL","AGTTTTATTGCACC","A","frameshift_variant","Vradi02g13780","WD repeat and HMG-box DNA-binding protein 1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[2,24157212,"SNP","G","A","stop_gained","Vradi02g13780","WD repeat and HMG-box DNA-binding protein 1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[2,24449376,"INDEL","CT","C","frameshift_variant","Vradi02g13940","Ethylene receptor","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ethylene binding [GO:0051740]; ethylene receptor activity [GO:0038199]; metal ion binding [GO:0046872]; phosphorelay sensor kinase activity [GO:0000155]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ethylene binding [GO:0051740]; ethylene receptor activity [GO:0038199]; metal ion binding [GO:0046872]; phosphorelay sensor kinase activity [GO:0000155]"]
[2,24449646,"INDEL","C","CA","frameshift_variant","Vradi02g13930","-","-","-","-","-"]
[2,24449796,"INDEL","GAC","G","frameshift_variant","Vradi02g13930","-","-","-","-","-"]
[2,24453357,"INDEL","AACCT","A","frameshift_variant&splice_donor_variant","Vradi02g13940","Ethylene receptor","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ethylene binding [GO:0051740]; ethylene receptor activity [GO:0038199]; metal ion binding [GO:0046872]; phosphorelay sensor kinase activity [GO:0000155]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ethylene binding [GO:0051740]; ethylene receptor activity [GO:0038199]; metal ion binding [GO:0046872]; phosphorelay sensor kinase activity [GO:0000155]"]
[2,24651140,"SNP","T","C","splice_acceptor_variant","Vradi02g14100","-","-","-","-","-"]
[2,24656883,"SNP","G","T","stop_gained","Vradi02g14120","zeaxanthin epoxidase, chloroplastic-like isoform X2","-","-","FAD binding [GO:0071949]","FAD binding [GO:0071949]"]
[2,24695953,"INDEL","CT","C","frameshift_variant","Vradi02g14140","protein EMSY-LIKE 3","defense response to fungus [GO:0050832]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response to fungus [GO:0050832]"]
[2,25096978,"INDEL","C","CTAAAAGTGTTTTTT","splice_acceptor_variant","Vradi02g14430","uncharacterized protein LOC106755960 isoform X3","-","-","-","-"]
[2,25202709,"INDEL","CTT","C","frameshift_variant","Vradi02g14490","ankyrin repeat-containing protein BDA1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,25202717,"INDEL","TGTACA","T","frameshift_variant","Vradi02g14490","ankyrin repeat-containing protein BDA1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,25202727,"INDEL","AGAGAAATGTTG","A","frameshift_variant","Vradi02g14490","ankyrin repeat-containing protein BDA1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[2,25229141,"INDEL","T","TAAGA","frameshift_variant","Vradi02g14520","WD repeat-containing protein 13","-","-","-","-"]
[3,531155,"SNP","C","T","stop_gained","Vradi03g00370","uncharacterized protein C18orf8 homolog isoform X1","regulation of autophagy [GO:0010506]","Mon1-Ccz1 complex [GO:0035658]","-","Mon1-Ccz1 complex [GO:0035658]; regulation of autophagy [GO:0010506]"]
[3,698509,"INDEL","GGTCAAACTTCTCTATCTCAA","G","splice_donor_variant","Vradi03g00420","gibberellin receptor GID1B","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[3,778057,"INDEL","GA","G","frameshift_variant","Vradi03g00470","sugar transporter ERD6-like 7","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]; carbohydrate transport [GO:0008643]"]
[3,805622,"INDEL","A","AC","frameshift_variant","Vradi03g00530","uncharacterized protein LOC106756742","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[3,892738,"INDEL","G","GA","frameshift_variant","Vradi03g00620","CSC1-like protein At4g02900","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[3,975639,"INDEL","TA","T","frameshift_variant","Vradi03g00670","basic 7S globulin","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[3,975649,"INDEL","T","TGAGA","frameshift_variant","Vradi03g00670","basic 7S globulin","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[3,975655,"INDEL","C","CA","frameshift_variant","Vradi03g00670","basic 7S globulin","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[3,975659,"INDEL","A","ACT","frameshift_variant","Vradi03g00670","basic 7S globulin","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[3,975671,"INDEL","GGT","G","frameshift_variant","Vradi03g00670","basic 7S globulin","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[3,1023324,"INDEL","CAT","C","frameshift_variant&stop_lost","Vradi03g00730","aluminum-activated malate transporter 14","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,1276615,"INDEL","CTT","C","frameshift_variant","Vradi03g00870","ent-kaur-16-ene synthase, chloroplastic isoform X2","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[3,1326588,"SNP","T","C","stop_lost","Vradi03g00900","LOW QUALITY PROTEIN: F-box protein At4g02760","-","-","-","-"]
[3,1472942,"INDEL","AAG","A","frameshift_variant","Vradi03g01050","-","-","-","-","-"]
[3,1545772,"INDEL","CAA","C","frameshift_variant","Vradi03g01100","heat stress transcription factor A-7a","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[3,1545778,"INDEL","GGAGGTGA","G","frameshift_variant","Vradi03g01100","heat stress transcription factor A-7a","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[3,1852290,"SNP","T","C","splice_donor_variant","Vradi03g01360","flowering locus K homology domain","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[3,1958992,"SNP","C","T","stop_gained","Vradi03g01460","Deoxyhypusine hydroxylase (DOHH) (EC 1.14.99.29) (Deoxyhypusine dioxygenase) (Deoxyhypusine monooxygenase)","peptidyl-lysine modification to peptidyl-hypusine [GO:0008612]","-","deoxyhypusine monooxygenase activity [GO:0019135]; metal ion binding [GO:0046872]","deoxyhypusine monooxygenase activity [GO:0019135]; metal ion binding [GO:0046872]; peptidyl-lysine modification to peptidyl-hypusine [GO:0008612]"]
[3,1959217,"INDEL","CCAATACCA","C","splice_acceptor_variant","Vradi03g01460","Deoxyhypusine hydroxylase (DOHH) (EC 1.14.99.29) (Deoxyhypusine dioxygenase) (Deoxyhypusine monooxygenase)","peptidyl-lysine modification to peptidyl-hypusine [GO:0008612]","-","deoxyhypusine monooxygenase activity [GO:0019135]; metal ion binding [GO:0046872]","deoxyhypusine monooxygenase activity [GO:0019135]; metal ion binding [GO:0046872]; peptidyl-lysine modification to peptidyl-hypusine [GO:0008612]"]
[3,1962323,"INDEL","TG","T","frameshift_variant","Vradi03g01460","Deoxyhypusine hydroxylase (DOHH) (EC 1.14.99.29) (Deoxyhypusine dioxygenase) (Deoxyhypusine monooxygenase)","peptidyl-lysine modification to peptidyl-hypusine [GO:0008612]","-","deoxyhypusine monooxygenase activity [GO:0019135]; metal ion binding [GO:0046872]","deoxyhypusine monooxygenase activity [GO:0019135]; metal ion binding [GO:0046872]; peptidyl-lysine modification to peptidyl-hypusine [GO:0008612]"]
[3,2056435,"INDEL","G","GT","frameshift_variant","Vradi03g01550","ethylene-responsive transcription factor ERF095-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[3,2056437,"INDEL","AC","A","frameshift_variant","Vradi03g01550","ethylene-responsive transcription factor ERF095-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[3,2068820,"INDEL","T","TA","frameshift_variant","Vradi03g01560","ethylene-responsive transcription factor 1B-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[3,2068858,"SNP","G","A","splice_donor_variant","Vradi03g01560","ethylene-responsive transcription factor 1B-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[3,2458910,"SNP","G","A","stop_gained","Vradi03g01890","protein ABHD18","-","-","-","-"]
[3,2458939,"SNP","C","T","stop_gained","Vradi03g01890","protein ABHD18","-","-","-","-"]
[3,2526081,"INDEL","GT","GTT","frameshift_variant","Vradi03g01950","beta-amyrin 24-hydroxylase-like","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","integral component of membrane [GO:0016021]; heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[3,2551405,"SNP","G","A","stop_gained","Vradi03g01970","protein POLYCHOME","negative regulation of ubiquitin protein ligase activity [GO:1904667]; regulation of nuclear division [GO:0051783]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; negative regulation of ubiquitin protein ligase activity [GO:1904667]; regulation of nuclear division [GO:0051783]"]
[3,2633063,"SNP","C","A","stop_gained","Vradi03g02030","uncharacterized protein LOC106757809 isoform X1","-","nuclear pore [GO:0005643]","-","nuclear pore [GO:0005643]"]
[3,2633109,"INDEL","TTCA","TA","frameshift_variant","Vradi03g02030","uncharacterized protein LOC106757809 isoform X1","-","nuclear pore [GO:0005643]","-","nuclear pore [GO:0005643]"]
[3,2633118,"INDEL","A","AAAAT","frameshift_variant","Vradi03g02030","uncharacterized protein LOC106757809 isoform X1","-","nuclear pore [GO:0005643]","-","nuclear pore [GO:0005643]"]
[3,2638494,"SNP","G","A","splice_acceptor_variant","Vradi03g02030","uncharacterized protein LOC106757809 isoform X1","-","nuclear pore [GO:0005643]","-","nuclear pore [GO:0005643]"]
[3,2821913,"INDEL","CAAGGGTAAAAAAAAAATGTTTTAAGACGTGAATCTA","C","splice_acceptor_variant&splice_donor_variant","Vradi03g02190","Guanylate kinase (EC 2.7.4.8)","-","-","ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]","ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]"]
[3,2827649,"INDEL","CCTGCAAATCCTTTTTCCCCAGTTCAAATTCGGGTGTCGCCTGATTGATAAGAAACTTGAAATGAAAGATTATATTACTTTTTTTTTATAAAACTTTTTTTTCTAACAGAAGCAAGAAAGGAGTCG","C","exon_loss_variant","Vradi03g02190","Guanylate kinase (EC 2.7.4.8)","-","-","ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]","ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]"]
[3,3362141,"SNP","G","A","stop_gained","Vradi03g02430","ABC transporter G family member 15-like isoform X2","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[3,3801044,"SNP","C","G","stop_gained","Vradi03g02740","receptor-like serine/threonine-protein kinase ALE2 isoform X2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[3,3809422,"INDEL","CG","C","frameshift_variant","tRNA-Asp","-","-","-","-","-"]
[3,3873963,"SNP","A","G","splice_donor_variant","Vradi03g02780","-","-","-","-","-"]
[3,3912978,"INDEL","G","GA","frameshift_variant","Vradi03g02800","uncharacterized protein LOC106757880 isoform X1","-","-","-","-"]
[3,4168409,"SNP","G","C","splice_acceptor_variant","Vradi03g02950","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[3,4189904,"SNP","G","T","stop_gained","Vradi03g02970","-","-","-","-","-"]
[3,4190354,"INDEL","CAATTTTGTCTCCGTTAAAAGAACTATGCAATACAACAGTAATCATATAATTAATGTTACGTTTCAAAGGACTGTGCCCTTGGTGGATGACAAAACCCAAACTATAGATGAATAGAGAATTTTCAAATCTTACCAAGCAGGAGTTCGTCGTTTTTCCCTGGATTTGGAGGATTGGGCGACATAGTGATCAGAATTGGTCAAGTATTTGT","C","frameshift_variant","Vradi03g02970","-","-","-","-","-"]
[3,4190630,"INDEL","C","CTTTAGTGATGGGTTTATCGAGTAGGAGGTGACAATTATATAAAAGATTAACACTCTATCTAAAATCTTAATAAGTTAATGGATATTTACTTTATATAATAATTTACTTTATCTAATATGTGATTTAGACTCATACTTAAATTTTACAACA","stop_gained","Vradi03g02970","-","-","-","-","-"]
[3,4191087,"SNP","T","G","splice_acceptor_variant","Vradi03g02970","-","-","-","-","-"]
[3,4191369,"INDEL","C","CG","frameshift_variant","Vradi03g02970","-","-","-","-","-"]
[3,4193631,"SNP","C","T","stop_gained","Vradi03g02970","-","-","-","-","-"]
[3,4208100,"SNP","G","A","stop_gained","Vradi03g02980","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[3,4208133,"INDEL","A","AATCTTAAAACAATGGATTAATGGGTCTTTC","stop_gained","Vradi03g02980","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[3,4210105,"INDEL","TG","T","frameshift_variant","Vradi03g02980","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[3,4236907,"SNP","A","C","stop_lost","Vradi03g03010","-","-","-","-","-"]
[3,4266080,"INDEL","CCT","C","frameshift_variant","Vradi03g03030","protein SLOW GREEN 1, chloroplastic","-","-","-","-"]
[3,4266241,"INDEL","C","CTA","frameshift_variant","Vradi03g03030","protein SLOW GREEN 1, chloroplastic","-","-","-","-"]
[3,4266244,"INDEL","CGT","C","frameshift_variant","Vradi03g03030","protein SLOW GREEN 1, chloroplastic","-","-","-","-"]
[3,4267039,"INDEL","G","GT","frameshift_variant","Vradi03g03030","protein SLOW GREEN 1, chloroplastic","-","-","-","-"]
[3,4343085,"INDEL","C","CTG","splice_acceptor_variant","Vradi03g03090","Phosphatidate phosphatase (EC 3.1.3.4)","-","-","phosphatidate phosphatase activity [GO:0008195]","phosphatidate phosphatase activity [GO:0008195]"]
[3,4414207,"INDEL","ATTAT","A","splice_acceptor_variant","Vradi03g03150","uncharacterized protein LOC106756908 isoform X3","-","-","-","-"]
[3,4414210,"INDEL","C","CTTTCACTT","frameshift_variant","Vradi03g03150","uncharacterized protein LOC106756908 isoform X3","-","-","-","-"]
[3,4492234,"INDEL","A","ATAT","start_lost","Vradi03g03220","pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2","-","-","-","-"]
[3,4731107,"INDEL","G","GTCCCTTCC","frameshift_variant","Vradi03g03470","uncharacterized protein LOC106757388 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,4816798,"INDEL","GCT","G","frameshift_variant","Vradi03g03530","-","-","-","-","-"]
[3,4816914,"INDEL","GT","G","frameshift_variant","Vradi03g03530","-","-","-","-","-"]
[3,4863652,"INDEL","CT","C","frameshift_variant","Vradi03g03540","protein let-418 isoform X1","-","-","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; nucleosome-dependent ATPase activity [GO:0070615]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; nucleosome-dependent ATPase activity [GO:0070615]"]
[3,4921322,"SNP","C","G","stop_lost","Vradi03g03580","uncharacterized protein LOC106757351","RNA metabolic process [GO:0016070]","-","RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]","RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]; RNA metabolic process [GO:0016070]"]
[3,4921940,"SNP","T","A","splice_acceptor_variant","Vradi03g03580","uncharacterized protein LOC106757351","RNA metabolic process [GO:0016070]","-","RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]","RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]; RNA metabolic process [GO:0016070]"]
[3,4922438,"INDEL","TG","T","frameshift_variant","Vradi03g03580","uncharacterized protein LOC106757351","RNA metabolic process [GO:0016070]","-","RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]","RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]; RNA metabolic process [GO:0016070]"]
[3,5005951,"SNP","G","A","splice_acceptor_variant","Vradi03g03660","Histidine--tRNA ligase (EC 6.1.1.21)","histidyl-tRNA aminoacylation [GO:0006427]","cytoplasm [GO:0005737]","ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]; histidyl-tRNA aminoacylation [GO:0006427]"]
[3,5006104,"SNP","G","T","splice_donor_variant","Vradi03g03660","Histidine--tRNA ligase (EC 6.1.1.21)","histidyl-tRNA aminoacylation [GO:0006427]","cytoplasm [GO:0005737]","ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]; histidyl-tRNA aminoacylation [GO:0006427]"]
[3,5195450,"INDEL","TCA","T","frameshift_variant","Vradi03g03800","triosephosphate isomerase, chloroplastic","glycolytic process [GO:0006096]","-","triose-phosphate isomerase activity [GO:0004807]","triose-phosphate isomerase activity [GO:0004807]; glycolytic process [GO:0006096]"]
[3,5195819,"INDEL","GTGATTGCATGCATAGGAGAATTGTTAGAAGAAAGGGAAGCAGGGAGAACTTTTGATGTTTGCTTTCAGCAATTGAAGGCTTATGCTGGTATAATCCATTTAAAATCGTTTTATTTTGGGGGAAAAACAAAAGGGGGGAGGGGTTTC","G","splice_donor_variant","Vradi03g03800","triosephosphate isomerase, chloroplastic","glycolytic process [GO:0006096]","-","triose-phosphate isomerase activity [GO:0004807]","triose-phosphate isomerase activity [GO:0004807]; glycolytic process [GO:0006096]"]
[3,5290885,"INDEL","C","CGT","frameshift_variant","Vradi03g03870","Expansin","plant-type cell wall organization [GO:0009664]","cell wall [GO:0005618]; extracellular region [GO:0005576]; membrane [GO:0016020]","-","cell wall [GO:0005618]; extracellular region [GO:0005576]; membrane [GO:0016020]; plant-type cell wall organization [GO:0009664]"]
[3,5595107,"SNP","A","T","stop_gained","Vradi03g04130","putative homeobox-leucine zipper protein ATHB-51","-","nucleus [GO:0005634]","DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]"]
[3,5715772,"SNP","A","C","start_lost","Vradi03g04250","-","-","-","-","-"]
[3,5716273,"INDEL","TTAATCTGTTAGGAGCACAATATAA","T","splice_acceptor_variant&splice_donor_variant","Vradi03g04250","-","-","-","-","-"]
[3,5725020,"INDEL","C","CCACCGCCCATGCTACCCAACCAGCTCCCTCTCGTCAT","frameshift_variant","Vradi03g04240","uncharacterized protein LOC111241409","-","-","-","-"]
[3,5799545,"INDEL","GA","G","frameshift_variant","Vradi03g04320","trihelix transcription factor PTL","-","-","-","-"]
[3,5799547,"INDEL","TGATGTTGA","T","frameshift_variant","Vradi03g04320","trihelix transcription factor PTL","-","-","-","-"]
[3,5959744,"INDEL","A","AGG","frameshift_variant","Vradi03g04420","IQ domain-containing protein IQM3","-","-","-","-"]
[3,6009452,"INDEL","TC","T","frameshift_variant","Vradi03g04470","LOW QUALITY PROTEIN: zinc finger A20 and AN1 domain-containing stress-associated protein 4","-","-","DNA binding [GO:0003677]; zinc ion binding [GO:0008270]","DNA binding [GO:0003677]; zinc ion binding [GO:0008270]"]
[3,6010274,"INDEL","G","GAA","frameshift_variant","Vradi03g04480","Purple acid phosphatase (EC 3.1.3.2)","-","-","acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]","acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]"]
[3,6053084,"INDEL","TTTTTAAAAAAAAAGCAATTTTGCATTATCCCAGGAA","T","splice_acceptor_variant","Vradi03g04520","protein ABSCISIC ACID-INSENSITIVE 5","positive regulation of transcription, DNA-templated [GO:0045893]; response to abscisic acid [GO:0009737]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; positive regulation of transcription, DNA-templated [GO:0045893]; response to abscisic acid [GO:0009737]"]
[3,6097858,"INDEL","ACCCAG","A","frameshift_variant","Vradi03g04600","cytochrome b-c1 complex subunit 9","mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]","integral component of membrane [GO:0016021]; mitochondrial respiratory chain complex III [GO:0005750]","-","integral component of membrane [GO:0016021]; mitochondrial respiratory chain complex III [GO:0005750]; mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]"]
[3,6101938,"SNP","C","A","stop_gained","Vradi03g04600","cytochrome b-c1 complex subunit 9","mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]","integral component of membrane [GO:0016021]; mitochondrial respiratory chain complex III [GO:0005750]","-","integral component of membrane [GO:0016021]; mitochondrial respiratory chain complex III [GO:0005750]; mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]"]
[3,6193916,"INDEL","CAGTCG","C","frameshift_variant","Vradi03g04730","-","-","-","-","-"]
[3,6293347,"INDEL","CTCTCAAATGCTATTTTGTTTAGTTTGGTTCATCACTAATCCTTCACTGAGGTACGCAGTA","C","frameshift_variant&stop_lost","Vradi03g04820","Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8)","protein folding [GO:0006457]","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein folding [GO:0006457]"]
[3,6604512,"INDEL","A","AGT","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6604513,"INDEL","ACT","A","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6604549,"INDEL","TG","T","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6604658,"INDEL","AC","A","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6604663,"INDEL","A","AACGT","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6604671,"INDEL","AT","A","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6604677,"INDEL","ATC","A","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6604831,"INDEL","A","ACG","splice_donor_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6605152,"INDEL","C","CAA","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6605154,"INDEL","A","AC","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6605161,"INDEL","AGC","A","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6605165,"INDEL","TCTCC","T","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6605223,"INDEL","CG","C","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6605228,"INDEL","G","GA","frameshift_variant","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6605277,"SNP","T","A","stop_gained","Vradi03g05090","aluminum-activated malate transporter 8-like isoform X1","malate transport [GO:0015743]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; malate transport [GO:0015743]"]
[3,6850563,"INDEL","TACGTTC","T","frameshift_variant&stop_lost","Vradi03g05310","cell division cycle 20.2, cofactor of APC complex","cell division [GO:0051301]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]","-","anaphase-promoting complex binding [GO:0010997]; ubiquitin-protein transferase activator activity [GO:0097027]","anaphase-promoting complex binding [GO:0010997]; ubiquitin-protein transferase activator activity [GO:0097027]; cell division [GO:0051301]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]"]
[3,6850819,"INDEL","GC","G","frameshift_variant","Vradi03g05310","cell division cycle 20.2, cofactor of APC complex","cell division [GO:0051301]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]","-","anaphase-promoting complex binding [GO:0010997]; ubiquitin-protein transferase activator activity [GO:0097027]","anaphase-promoting complex binding [GO:0010997]; ubiquitin-protein transferase activator activity [GO:0097027]; cell division [GO:0051301]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]"]
[3,6850943,"INDEL","TG","T","frameshift_variant","Vradi03g05310","cell division cycle 20.2, cofactor of APC complex","cell division [GO:0051301]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]","-","anaphase-promoting complex binding [GO:0010997]; ubiquitin-protein transferase activator activity [GO:0097027]","anaphase-promoting complex binding [GO:0010997]; ubiquitin-protein transferase activator activity [GO:0097027]; cell division [GO:0051301]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]"]
[3,6906794,"SNP","C","T","splice_acceptor_variant","Vradi03g05350","D-lactate dehydrogenase [cytochrome], mitochondrial isoform X4","-","-","FAD binding [GO:0071949]; oxidoreductase activity [GO:0016491]","FAD binding [GO:0071949]; oxidoreductase activity [GO:0016491]"]
[3,6931578,"SNP","C","T","stop_gained","Vradi03g05370","uncharacterized protein LOC106757251","-","-","-","-"]
[3,6931750,"INDEL","GTAAGTATCAGC","G","frameshift_variant","Vradi03g05370","uncharacterized protein LOC106757251","-","-","-","-"]
[3,7156771,"INDEL","T","TC","frameshift_variant","Vradi03g05620","-","-","-","-","-"]
[3,7157248,"SNP","G","T","stop_gained","Vradi03g05620","-","-","-","-","-"]
[3,7161426,"INDEL","AGGCTTATCTTCGCCAC","A","frameshift_variant","Vradi03g05620","-","-","-","-","-"]
[3,7263792,"SNP","G","T","stop_gained","Vradi03g05760","spermatogenesis-associated protein 20 isoform X2","carbohydrate metabolic process [GO:0005975]","-","-","carbohydrate metabolic process [GO:0005975]"]
[3,7263917,"SNP","G","A","stop_gained","Vradi03g05760","spermatogenesis-associated protein 20 isoform X2","carbohydrate metabolic process [GO:0005975]","-","-","carbohydrate metabolic process [GO:0005975]"]
[3,7264206,"SNP","T","A","stop_gained","Vradi03g05760","spermatogenesis-associated protein 20 isoform X2","carbohydrate metabolic process [GO:0005975]","-","-","carbohydrate metabolic process [GO:0005975]"]
[3,7264233,"INDEL","G","GT","frameshift_variant&stop_gained","Vradi03g05760","spermatogenesis-associated protein 20 isoform X2","carbohydrate metabolic process [GO:0005975]","-","-","carbohydrate metabolic process [GO:0005975]"]
[3,7378578,"INDEL","GT","GTT","frameshift_variant","Vradi03g05900","ankyrin repeat-containing protein At5g02620-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,7378644,"SNP","G","T","splice_donor_variant","Vradi03g05900","ankyrin repeat-containing protein At5g02620-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,7379548,"SNP","T","A","stop_gained","Vradi03g05900","ankyrin repeat-containing protein At5g02620-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,7425344,"INDEL","CA","C","frameshift_variant","Vradi03g05990","U6 snRNA-associated Sm-like protein LSm4","mRNA splicing, via spliceosome [GO:0000398]; nuclear-transcribed mRNA catabolic process [GO:0000956]","spliceosomal complex [GO:0005681]","RNA binding [GO:0003723]","spliceosomal complex [GO:0005681]; RNA binding [GO:0003723]; mRNA splicing, via spliceosome [GO:0000398]; nuclear-transcribed mRNA catabolic process [GO:0000956]"]
[3,7467097,"SNP","G","A","stop_gained","Vradi03g06020","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","protein ubiquitination [GO:0016567]","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]; protein ubiquitination [GO:0016567]"]
[3,7467103,"INDEL","TGAATAATTGCCCTTGCTTC","T","frameshift_variant","Vradi03g06020","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","protein ubiquitination [GO:0016567]","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]; protein ubiquitination [GO:0016567]"]
[3,7546563,"SNP","T","C","stop_lost","Vradi03g06100","uncharacterized protein LOC106757405","-","-","-","-"]
[3,7668315,"SNP","A","C","stop_lost","Vradi03g06210","-","-","-","-","-"]
[3,7903882,"SNP","C","T","stop_gained","Vradi03g06460","DNA mismatch repair protein","mismatch repair [GO:0006298]","-","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[3,7915953,"INDEL","A","AT","frameshift_variant","Vradi03g06480","Vacuolar protein sorting-associated protein 51 homolog","endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]","cytosol [GO:0005829]; GARP complex [GO:0000938]","-","cytosol [GO:0005829]; GARP complex [GO:0000938]; endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]"]
[3,7915991,"INDEL","CAAATCAAAACT","C","frameshift_variant","Vradi03g06480","Vacuolar protein sorting-associated protein 51 homolog","endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]","cytosol [GO:0005829]; GARP complex [GO:0000938]","-","cytosol [GO:0005829]; GARP complex [GO:0000938]; endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]"]
[3,7916017,"INDEL","AT","A","frameshift_variant","Vradi03g06480","Vacuolar protein sorting-associated protein 51 homolog","endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]","cytosol [GO:0005829]; GARP complex [GO:0000938]","-","cytosol [GO:0005829]; GARP complex [GO:0000938]; endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]"]
[3,7916455,"INDEL","G","GA","frameshift_variant","Vradi03g06480","Vacuolar protein sorting-associated protein 51 homolog","endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]","cytosol [GO:0005829]; GARP complex [GO:0000938]","-","cytosol [GO:0005829]; GARP complex [GO:0000938]; endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]"]
[3,7941274,"INDEL","A","AAG","splice_acceptor_variant","Vradi03g06510","probable glutamyl endopeptidase, chloroplastic isoform X2","-","-","serine-type peptidase activity [GO:0008236]","serine-type peptidase activity [GO:0008236]"]
[3,7946362,"SNP","T","A","stop_gained","Vradi03g06520","protein trichome birefringence-like 6","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,7946463,"INDEL","G","GA","frameshift_variant","Vradi03g06520","protein trichome birefringence-like 6","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,8044338,"INDEL","G","GTA","frameshift_variant","Vradi03g06620","WRKY transcription factor","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[3,8113129,"INDEL","TTCTCTGGCTTTAACTTGCGTC","T","stop_lost","Vradi03g06710","transcription factor JAMYB-like","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[3,8187227,"SNP","A","T","splice_donor_variant","Vradi03g06770","polygalacturonase At1g48100 isoform X1","carbohydrate metabolic process [GO:0005975]","cell wall [GO:0005618]","polygalacturonase activity [GO:0004650]","cell wall [GO:0005618]; polygalacturonase activity [GO:0004650]; carbohydrate metabolic process [GO:0005975]"]
[3,8187228,"SNP","C","G","splice_donor_variant","Vradi03g06770","polygalacturonase At1g48100 isoform X1","carbohydrate metabolic process [GO:0005975]","cell wall [GO:0005618]","polygalacturonase activity [GO:0004650]","cell wall [GO:0005618]; polygalacturonase activity [GO:0004650]; carbohydrate metabolic process [GO:0005975]"]
[3,8198914,"SNP","T","C","splice_donor_variant","Vradi03g06780","short-chain dehydrogenase reductase 3b-like","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[3,8465843,"INDEL","A","ACT","frameshift_variant","Vradi03g06990","uncharacterized protein LOC106757748","-","-","-","-"]
[3,8645165,"SNP","C","T","stop_gained","Vradi03g07190","protein NRT1/ PTR FAMILY 4.6","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[3,8645221,"SNP","G","A","stop_gained","Vradi03g07190","protein NRT1/ PTR FAMILY 4.6","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[3,8645646,"SNP","G","C","splice_donor_variant","Vradi03g07190","protein NRT1/ PTR FAMILY 4.6","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[3,8703724,"INDEL","TG","T","frameshift_variant","Vradi03g07250","G patch domain-containing protein 8","-","-","metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]","metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]"]
[3,8816619,"SNP","G","A","start_lost","Vradi03g07350","protein NIM1-INTERACTING 3-like","regulation of systemic acquired resistance [GO:0010112]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; regulation of systemic acquired resistance [GO:0010112]"]
[3,8967801,"INDEL","GT","G","frameshift_variant","Vradi03g07500","peptide chain release factor PrfB2, chloroplastic","-","cytoplasm [GO:0005737]","translation release factor activity, codon specific [GO:0016149]","cytoplasm [GO:0005737]; translation release factor activity, codon specific [GO:0016149]"]
[3,8990919,"INDEL","CTT","C","frameshift_variant","Vradi03g07540","-","-","-","-","-"]
[3,9020557,"SNP","G","C","splice_donor_variant","Vradi03g07570","protein SAR DEFICIENT 1 isoform X2","-","-","calmodulin binding [GO:0005516]","calmodulin binding [GO:0005516]"]
[3,9067091,"INDEL","TTG","TTGTGTG","splice_donor_variant","Vradi03g07620","kinesin-like protein KIN-14I","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[3,9296320,"SNP","C","T","stop_gained","Vradi03g07840","uncharacterized protein LOC106757197","-","-","-","-"]
[3,9296350,"SNP","C","T","stop_gained","Vradi03g07840","uncharacterized protein LOC106757197","-","-","-","-"]
[3,9409682,"SNP","G","A","stop_gained","Vradi03g07910","(1->3)-beta-glucan endohydrolase (EC 3.2.1.39) (Beta-1,3-endoglucanase)","carbohydrate metabolic process [GO:0005975]","-","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]; carbohydrate metabolic process [GO:0005975]"]
[3,9664904,"INDEL","TTA","T","frameshift_variant","Vradi03g08160","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[3,9664911,"INDEL","GGA","G","frameshift_variant","Vradi03g08160","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[3,9664915,"INDEL","TTTTCGCTG","T","frameshift_variant","Vradi03g08160","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[3,9664938,"SNP","T","A","stop_gained","Vradi03g08160","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[3,9665022,"SNP","G","A","stop_gained","Vradi03g08160","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[3,9755727,"INDEL","A","AT","frameshift_variant","Vradi03g08190","aspartic proteinase PCS1","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[3,9755778,"INDEL","TCG","T","frameshift_variant","Vradi03g08190","aspartic proteinase PCS1","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[3,9768184,"SNP","A","G","splice_donor_variant","Vradi03g08200","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]"]
[3,9791687,"INDEL","AATTTGCAGCCATTAATTAGGGAGCTTCAACGTGTGATTTCATTCC","A","start_lost","Vradi03g08220","-","-","-","-","-"]
[3,9896510,"INDEL","GAA","G","frameshift_variant&start_lost","Vradi03g08340","tropinone reductase homolog At5g06060","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[3,9901379,"INDEL","CTA","C","splice_acceptor_variant","Vradi03g08340","tropinone reductase homolog At5g06060","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[3,10227497,"INDEL","C","CATTTT","frameshift_variant","Vradi03g08630","uncharacterized protein At2g39920 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,10227523,"INDEL","TATGA","T","frameshift_variant","Vradi03g08630","uncharacterized protein At2g39920 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,10227535,"INDEL","T","TG","frameshift_variant","Vradi03g08630","uncharacterized protein At2g39920 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,10227536,"SNP","A","T","stop_gained","Vradi03g08630","uncharacterized protein At2g39920 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,10585321,"INDEL","AGCTCTTCTATCTTCTTGATCTTCCCTTGTTCT","A","frameshift_variant","Vradi03g08910","uncharacterized protein LOC106779372 isoform X1","-","-","-","-"]
[3,10585458,"SNP","C","T","splice_acceptor_variant","Vradi03g08910","uncharacterized protein LOC106779372 isoform X1","-","-","-","-"]
[3,10592098,"INDEL","T","TAA","frameshift_variant&stop_gained","Vradi03g08920","Fucosyltransferase (EC 2.4.1.-)","cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]","Golgi cisterna membrane [GO:0032580]; integral component of membrane [GO:0016021]","galactoside 2-alpha-L-fucosyltransferase activity [GO:0008107]","Golgi cisterna membrane [GO:0032580]; integral component of membrane [GO:0016021]; galactoside 2-alpha-L-fucosyltransferase activity [GO:0008107]; cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]"]
[3,10592101,"INDEL","A","ATT","frameshift_variant","Vradi03g08920","Fucosyltransferase (EC 2.4.1.-)","cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]","Golgi cisterna membrane [GO:0032580]; integral component of membrane [GO:0016021]","galactoside 2-alpha-L-fucosyltransferase activity [GO:0008107]","Golgi cisterna membrane [GO:0032580]; integral component of membrane [GO:0016021]; galactoside 2-alpha-L-fucosyltransferase activity [GO:0008107]; cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]"]
[3,10593007,"SNP","C","T","stop_gained","Vradi03g08920","Fucosyltransferase (EC 2.4.1.-)","cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]","Golgi cisterna membrane [GO:0032580]; integral component of membrane [GO:0016021]","galactoside 2-alpha-L-fucosyltransferase activity [GO:0008107]","Golgi cisterna membrane [GO:0032580]; integral component of membrane [GO:0016021]; galactoside 2-alpha-L-fucosyltransferase activity [GO:0008107]; cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]"]
[3,10931976,"INDEL","T","TCGTATTATTC","splice_acceptor_variant","Vradi03g09090","uncharacterized protein LOC106777255","-","-","-","-"]
[3,11180168,"SNP","A","G","start_lost","Vradi03g09210","uncharacterized protein LOC106757551 isoform X3","-","-","-","-"]
[3,11221064,"INDEL","AT","A","frameshift_variant","Vradi03g09270","-","-","-","-","-"]
[3,11472885,"INDEL","G","GTA","frameshift_variant","Vradi03g09390","SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1","-","-","ATP binding [GO:0005524]; nucleosome-dependent ATPase activity [GO:0070615]","ATP binding [GO:0005524]; nucleosome-dependent ATPase activity [GO:0070615]"]
[3,11518190,"SNP","A","C","splice_donor_variant","Vradi03g09410","SNAP25 homologous protein SNAP33","protein transport [GO:0015031]","-","-","protein transport [GO:0015031]"]
[3,11518308,"SNP","T","A","stop_gained","Vradi03g09410","SNAP25 homologous protein SNAP33","protein transport [GO:0015031]","-","-","protein transport [GO:0015031]"]
[3,11518428,"INDEL","GTTATCGCACCCGTCTTTTTGGGTTTCCATGTTTTGGAAAACATGCCACCAAGACTTCCCAAAAGT","G","frameshift_variant","Vradi03g09410","SNAP25 homologous protein SNAP33","protein transport [GO:0015031]","-","-","protein transport [GO:0015031]"]
[3,11518820,"INDEL","AC","A","frameshift_variant","Vradi03g09410","SNAP25 homologous protein SNAP33","protein transport [GO:0015031]","-","-","protein transport [GO:0015031]"]
[3,11561788,"INDEL","A","ATG","frameshift_variant","Vradi03g09420","Cysteine dioxygenase (EC 1.13.11.20)","-","-","cysteine dioxygenase activity [GO:0017172]; metal ion binding [GO:0046872]","cysteine dioxygenase activity [GO:0017172]; metal ion binding [GO:0046872]"]
[3,11607285,"SNP","A","C","splice_donor_variant","Vradi03g09450","ATP synthase subunit gamma, mitochondrial","-","proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]","proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]"]
[3,11677343,"SNP","G","A","splice_acceptor_variant","Vradi03g09500","DExH-box ATP-dependent RNA helicase DExH14 isoform X2","-","spliceosomal complex [GO:0005681]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[3,12103428,"INDEL","C","CTGTT","splice_acceptor_variant","Vradi03g09740","uncharacterized protein LOC106762496 isoform X2","-","-","-","-"]
[3,12193102,"SNP","C","A","stop_gained","Vradi03g09790","uncharacterized protein LOC106756765 isoform X2","-","-","-","-"]
[3,12193116,"INDEL","A","AG","frameshift_variant","Vradi03g09790","uncharacterized protein LOC106756765 isoform X2","-","-","-","-"]
[3,12193268,"SNP","A","G","splice_donor_variant","Vradi03g09790","uncharacterized protein LOC106756765 isoform X2","-","-","-","-"]
[3,12193371,"SNP","A","C","stop_gained","Vradi03g09790","uncharacterized protein LOC106756765 isoform X2","-","-","-","-"]
[3,12195034,"INDEL","TC","T","frameshift_variant","Vradi03g09790","uncharacterized protein LOC106756765 isoform X2","-","-","-","-"]
[3,12216317,"SNP","G","A","stop_gained","Vradi03g09800","uncharacterized protein LOC106756687","-","-","-","-"]
[3,12271743,"INDEL","CG","C","frameshift_variant","tRNA-Asp","-","-","-","-","-"]
[3,12640949,"INDEL","CCTCCACAGTAGGAACT","C","frameshift_variant","Vradi03g10060","deSI-like protein At4g17486","-","-","peptidase activity [GO:0008233]","peptidase activity [GO:0008233]"]
[3,12649890,"INDEL","GAC","G","frameshift_variant","Vradi03g10070","-","-","-","-","-"]
[3,12666590,"INDEL","G","GA","frameshift_variant","Vradi03g10080","-","-","-","-","-"]
[3,12685103,"INDEL","GAC","G","frameshift_variant","Vradi03g10090","acyl-protein thioesterase 1","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[3,12686461,"SNP","A","C","splice_donor_variant","Vradi03g10090","acyl-protein thioesterase 1","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[3,12718675,"SNP","G","A","stop_gained","Vradi03g10110","RING-H2 finger protein ATL66-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,12718730,"INDEL","TC","T","frameshift_variant","Vradi03g10110","RING-H2 finger protein ATL66-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[3,12746158,"SNP","G","A","stop_gained","Vradi03g10140","-","-","-","-","-"]
[3,12815532,"SNP","A","T","splice_acceptor_variant","Vradi03g10200","putative serine/threonine-protein kinase-like protein CCR3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[3,12815634,"INDEL","T","TGTACAGAG","frameshift_variant","Vradi03g10200","putative serine/threonine-protein kinase-like protein CCR3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[3,12815642,"INDEL","C","CTATAGATACACGCAGGGTGAGTGACTTAGTCTCTATGTAATCTATAATTAATAATTAAAGTGGATTCTCCCTTCTCATTTTGGAACA","stop_gained","Vradi03g10200","putative serine/threonine-protein kinase-like protein CCR3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[3,12815653,"SNP","G","A","stop_gained","Vradi03g10200","putative serine/threonine-protein kinase-like protein CCR3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[3,12815662,"SNP","T","G","stop_gained","Vradi03g10200","putative serine/threonine-protein kinase-like protein CCR3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[3,12815858,"INDEL","TCTGAAGCAGATTTTGGAACGTCCCGTGTCTCCAGTTTTGTTTCGAGAGTGGACTATGTGATCAGGAGTAGTGGAATAACAGATTTAGAAACCTTCCCTGTGCCTGGTTTTGCTTCTGAGGCTTACTCCACCACTGTTG","T","bidirectional_gene_fusion","Vradi03g10200&Vradi03g10210","-","-","-","-","-"]
[3,12816483,"SNP","C","A","splice_donor_variant","Vradi03g10210","-","-","-","-","-"]
[3,12818146,"SNP","A","T","splice_acceptor_variant","Vradi03g10200","putative serine/threonine-protein kinase-like protein CCR3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[3,12818234,"SNP","G","T","stop_gained","Vradi03g10200","putative serine/threonine-protein kinase-like protein CCR3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,34905,"INDEL","CCT","C","frameshift_variant","Vradi04g00010","splicing factor, proline- and glutamine-rich-like","-","-","-","-"]
[4,317971,"SNP","C","T","stop_gained","Vradi04g00090","-","-","-","-","-"]
[4,793378,"INDEL","CTTGT","C","frameshift_variant","Vradi04g00240","-","-","-","-","-"]
[4,795579,"INDEL","AG","A","frameshift_variant","Vradi04g00240","-","-","-","-","-"]
[4,795583,"INDEL","TGTTTC","T","frameshift_variant","Vradi04g00240","-","-","-","-","-"]
[4,889999,"INDEL","CATTTACGGTTGCAGGAT","C","splice_acceptor_variant","Vradi04g00320","chlorophyll synthase, chloroplastic","chlorophyll biosynthetic process [GO:0015995]","integral component of membrane [GO:0016021]","chlorophyll synthetase activity [GO:0046408]","integral component of membrane [GO:0016021]; chlorophyll synthetase activity [GO:0046408]; chlorophyll biosynthetic process [GO:0015995]"]
[4,891222,"INDEL","C","CGT","frameshift_variant","Vradi04g00330","protein SLE1","-","-","-","-"]
[4,1714787,"SNP","T","A","stop_gained","Vradi04g00480","-","-","-","-","-"]
[4,1714991,"INDEL","A","AG","frameshift_variant","Vradi04g00480","-","-","-","-","-"]
[4,1715271,"SNP","C","T","start_lost","Vradi04g00480","-","-","-","-","-"]
[4,2370675,"INDEL","TG","T","frameshift_variant","Vradi04g00700","probable sodium/metabolite cotransporter BASS3, chloroplastic","-","chloroplast envelope [GO:0009941]; integral component of membrane [GO:0016021]","-","chloroplast envelope [GO:0009941]; integral component of membrane [GO:0016021]"]
[4,2370707,"SNP","C","A","stop_gained","Vradi04g00700","probable sodium/metabolite cotransporter BASS3, chloroplastic","-","chloroplast envelope [GO:0009941]; integral component of membrane [GO:0016021]","-","chloroplast envelope [GO:0009941]; integral component of membrane [GO:0016021]"]
[4,2458825,"SNP","G","A","stop_gained","Vradi04g00740","uncharacterized protein LOC111241520","recombinational repair [GO:0000725]","-","-","recombinational repair [GO:0000725]"]
[4,2659364,"INDEL","C","CTTT","stop_gained","Vradi04g00810","-","-","-","-","-"]
[4,2767096,"SNP","A","T","splice_donor_variant","Vradi04g00850","Cytochrome b561 and DOMON domain-containing protein","-","integral component of membrane [GO:0016021]","metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; metal ion binding [GO:0046872]"]
[4,3003223,"INDEL","G","GT","frameshift_variant","Vradi04g00940","probable 2-oxoglutarate/Fe(II)-dependent dioxygenase","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[4,3003225,"INDEL","AT","A","frameshift_variant","Vradi04g00940","probable 2-oxoglutarate/Fe(II)-dependent dioxygenase","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[4,3003271,"INDEL","T","TC","frameshift_variant","Vradi04g00940","probable 2-oxoglutarate/Fe(II)-dependent dioxygenase","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[4,3003276,"INDEL","CG","C","frameshift_variant","Vradi04g00940","probable 2-oxoglutarate/Fe(II)-dependent dioxygenase","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[4,3003370,"INDEL","A","AT","splice_acceptor_variant","Vradi04g00940","probable 2-oxoglutarate/Fe(II)-dependent dioxygenase","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[4,3004121,"INDEL","C","CT","frameshift_variant","Vradi04g00940","probable 2-oxoglutarate/Fe(II)-dependent dioxygenase","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[4,3164134,"SNP","A","G","splice_donor_variant","Vradi04g00990","NDR1/HIN1-like protein 13","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,3164297,"INDEL","AGG","A","frameshift_variant","Vradi04g00990","NDR1/HIN1-like protein 13","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,3268960,"INDEL","A","ATCAGGAT","frameshift_variant","Vradi04g01020","Peptidylprolyl isomerase (EC 5.2.1.8)","-","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]"]
[4,3287695,"INDEL","CA","C","frameshift_variant","Vradi04g01030","mediator of RNA polymerase II transcription subunit 12 isoform X2","regulation of transcription by RNA polymerase II [GO:0006357]","integral component of membrane [GO:0016021]; mediator complex [GO:0016592]","transcription coregulator activity [GO:0003712]","integral component of membrane [GO:0016021]; mediator complex [GO:0016592]; transcription coregulator activity [GO:0003712]; regulation of transcription by RNA polymerase II [GO:0006357]"]
[4,3287776,"SNP","G","T","splice_donor_variant","Vradi04g01030","mediator of RNA polymerase II transcription subunit 12 isoform X2","regulation of transcription by RNA polymerase II [GO:0006357]","integral component of membrane [GO:0016021]; mediator complex [GO:0016592]","transcription coregulator activity [GO:0003712]","integral component of membrane [GO:0016021]; mediator complex [GO:0016592]; transcription coregulator activity [GO:0003712]; regulation of transcription by RNA polymerase II [GO:0006357]"]
[4,3381961,"SNP","C","A","splice_acceptor_variant","Vradi04g01060","MAP3K epsilon protein kinase 1 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[4,3391728,"INDEL","C","CAA","frameshift_variant","Vradi04g01060","MAP3K epsilon protein kinase 1 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[4,3440436,"SNP","C","T","stop_gained","Vradi04g01070","-","-","-","-","-"]
[4,3440445,"INDEL","A","AT","frameshift_variant","Vradi04g01070","-","-","-","-","-"]
[4,3622900,"SNP","C","T","stop_gained","Vradi04g01190","-","-","-","-","-"]
[4,3623034,"INDEL","CA","C","frameshift_variant","Vradi04g01190","-","-","-","-","-"]
[4,3623194,"INDEL","AT","A","frameshift_variant","Vradi04g01190","-","-","-","-","-"]
[4,3623196,"INDEL","AG","A","frameshift_variant","Vradi04g01190","-","-","-","-","-"]
[4,3623251,"INDEL","AC","A","frameshift_variant","Vradi04g01190","-","-","-","-","-"]
[4,3699336,"SNP","G","A","splice_acceptor_variant","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3699365,"INDEL","GA","G","frameshift_variant","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3699368,"SNP","G","T","stop_gained","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3699525,"SNP","G","A","splice_acceptor_variant","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3699822,"SNP","G","A","splice_acceptor_variant","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3699864,"SNP","T","A","stop_gained","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3700001,"INDEL","AG","A","frameshift_variant","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3700017,"INDEL","C","CA","frameshift_variant","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3700959,"SNP","G","T","splice_acceptor_variant","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3700985,"SNP","C","T","stop_gained","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3701037,"SNP","G","A","stop_gained","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3701078,"SNP","C","T","stop_gained","Vradi04g01230","uncharacterized protein LOC111242675 isoform X2","-","-","-","-"]
[4,3881332,"SNP","C","G","splice_acceptor_variant","Vradi04g01310","-","-","-","-","-"]
[4,3881334,"INDEL","AG","A","frameshift_variant","Vradi04g01310","-","-","-","-","-"]
[4,3881441,"INDEL","G","GA","frameshift_variant","Vradi04g01310","-","-","-","-","-"]
[4,4087388,"SNP","A","G","stop_lost","Vradi04g01370","-","-","-","-","-"]
[4,4087484,"INDEL","AG","A","frameshift_variant","Vradi04g01370","-","-","-","-","-"]
[4,4386439,"INDEL","TG","T","frameshift_variant","Vradi04g01460","-","-","-","-","-"]
[4,4405044,"SNP","G","T","stop_gained","Vradi04g01480","phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like isoform X2","-","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]"]
[4,4406405,"SNP","G","C","splice_acceptor_variant","Vradi04g01480","phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like isoform X2","-","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]"]
[4,4406525,"SNP","C","A","stop_gained","Vradi04g01480","phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like isoform X2","-","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]"]
[4,4406574,"SNP","C","T","stop_gained","Vradi04g01480","phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like isoform X2","-","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]"]
[4,4534205,"SNP","C","T","stop_gained","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4534329,"SNP","G","A","stop_gained","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4534373,"INDEL","ATAGCCAAGTATGAAGCTGATTGTCTTGCTATGAGTGAGGCTGATAACAGCCGAAATGGTAACTCGCAGAGCAT","A","frameshift_variant","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4534517,"SNP","C","T","stop_gained","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4534560,"SNP","G","A","stop_gained","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4534799,"SNP","G","T","stop_gained","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4535051,"SNP","C","T","stop_gained","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4535180,"SNP","C","T","stop_gained","Vradi04g01530","ETHYLENE INSENSITIVE 3-like 3 protein isoform X1","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[4,4572329,"SNP","C","T","stop_gained","Vradi04g01550","Glycosyltransferase (EC 2.4.1.-)","-","integral component of membrane [GO:0016021]","UDP-glycosyltransferase activity [GO:0008194]","integral component of membrane [GO:0016021]; UDP-glycosyltransferase activity [GO:0008194]"]
[4,4772210,"SNP","T","G","splice_acceptor_variant","Vradi04g01750","Protein DETOXIFICATION (Multidrug and toxic compound extrusion protein)","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[4,4935826,"INDEL","TTG","T","frameshift_variant","Vradi04g01970","scarecrow-like protein 11","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[4,5130644,"SNP","C","T","stop_gained","tRNA-Met","-","-","-","-","-"]
[4,5294356,"SNP","C","A","stop_gained","Vradi04g02320","UDP-galactose/UDP-glucose transporter 5","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; carbohydrate transport [GO:0008643]"]
[4,5363947,"SNP","A","T","stop_gained","Vradi04g02390","probable NOT transcription complex subunit VIP2 isoform X1","regulation of transcription, DNA-templated [GO:0006355]","CCR4-NOT core complex [GO:0030015]","-","CCR4-NOT core complex [GO:0030015]; regulation of transcription, DNA-templated [GO:0006355]"]
[4,5710345,"SNP","A","G","splice_acceptor_variant","Vradi04g02670","E3 SUMO-protein ligase SIZ1 isoform X1","protein sumoylation [GO:0016925]","-","ligase activity [GO:0016874]; transferase activity [GO:0016740]; zinc ion binding [GO:0008270]","ligase activity [GO:0016874]; transferase activity [GO:0016740]; zinc ion binding [GO:0008270]; protein sumoylation [GO:0016925]"]
[4,5760391,"SNP","A","T","stop_gained","Vradi04g02710","NAC transcription factor ONAC010","regulation of transcription, DNA-templated [GO:0006355]","-","DNA binding [GO:0003677]","DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[4,5884090,"INDEL","GAT","G","frameshift_variant","Vradi04g02790","probable serine/threonine-protein kinase PBL28 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,5916527,"SNP","C","T","stop_gained","Vradi04g02820","-","-","-","-","-"]
[4,5982700,"INDEL","C","CTG","frameshift_variant","Vradi04g02850","serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1","regulation of phosphoprotein phosphatase activity [GO:0043666]","-","protein phosphatase binding [GO:0019903]","protein phosphatase binding [GO:0019903]; regulation of phosphoprotein phosphatase activity [GO:0043666]"]
[4,6548563,"INDEL","GA","G","frameshift_variant","Vradi04g03180","zinc finger protein 1","-","-","-","-"]
[4,6554218,"INDEL","CATAT","C","frameshift_variant","Vradi04g03190","protein SENSITIVE TO PROTON RHIZOTOXICITY 2","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]","-","-","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]"]
[4,6554220,"INDEL","CAT","C","frameshift_variant","Vradi04g03190","protein SENSITIVE TO PROTON RHIZOTOXICITY 2","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]","-","-","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]"]
[4,6554242,"INDEL","AT","A","frameshift_variant","Vradi04g03190","protein SENSITIVE TO PROTON RHIZOTOXICITY 2","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]","-","-","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]"]
[4,6554245,"INDEL","CAGCGAAGA","C","frameshift_variant","Vradi04g03190","protein SENSITIVE TO PROTON RHIZOTOXICITY 2","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]","-","-","response to acidic pH [GO:0010447]; response to aluminum ion [GO:0010044]"]
[4,6630218,"INDEL","GTAAT","G","splice_donor_variant","Vradi04g03240","lysosomal Pro-X carboxypeptidase-like isoform X1","-","-","carboxypeptidase activity [GO:0004180]; serine-type peptidase activity [GO:0008236]","carboxypeptidase activity [GO:0004180]; serine-type peptidase activity [GO:0008236]"]
[4,6781214,"SNP","G","A","stop_gained","tRNA-Leu","-","-","-","-","-"]
[4,8184888,"INDEL","CTGTGGGGTCAGTTTT","C","splice_donor_variant","Vradi04g03880","-","-","-","-","-"]
[4,8697511,"SNP","T","G","stop_lost","Vradi04g04060","cell division control protein 45 homolog","cell cycle [GO:0007049]; cell division [GO:0051301]; DNA replication initiation [GO:0006270]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell cycle [GO:0007049]; cell division [GO:0051301]; DNA replication initiation [GO:0006270]"]
[4,8697916,"INDEL","CCTGT","C","splice_acceptor_variant","Vradi04g04060","cell division control protein 45 homolog","cell cycle [GO:0007049]; cell division [GO:0051301]; DNA replication initiation [GO:0006270]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell cycle [GO:0007049]; cell division [GO:0051301]; DNA replication initiation [GO:0006270]"]
[4,8817321,"INDEL","TC","T","frameshift_variant","Vradi04g04120","-","-","-","-","-"]
[4,8817350,"SNP","G","A","stop_gained","Vradi04g04120","-","-","-","-","-"]
[4,9139640,"SNP","A","C","splice_acceptor_variant","Vradi04g04160","GPI ethanolamine phosphate transferase 1 (EC 2.-.-.-)","GPI anchor biosynthetic process [GO:0006506]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","mannose-ethanolamine phosphotransferase activity [GO:0051377]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; mannose-ethanolamine phosphotransferase activity [GO:0051377]; GPI anchor biosynthetic process [GO:0006506]"]
[4,9226099,"INDEL","GCC","G","frameshift_variant","Vradi04g04210","DNA repair protein UVH3","nucleotide-excision repair [GO:0006289]","nucleus [GO:0005634]","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]; single-stranded DNA binding [GO:0003697]","nucleus [GO:0005634]; endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]; single-stranded DNA binding [GO:0003697]; nucleotide-excision repair [GO:0006289]"]
[4,9228718,"INDEL","TGCACATGCGCACATGC","T","frameshift_variant","Vradi04g04210","DNA repair protein UVH3","nucleotide-excision repair [GO:0006289]","nucleus [GO:0005634]","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]; single-stranded DNA binding [GO:0003697]","nucleus [GO:0005634]; endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]; single-stranded DNA binding [GO:0003697]; nucleotide-excision repair [GO:0006289]"]
[4,9455618,"INDEL","TCTTGTTC","T","frameshift_variant","Vradi04g04300","phosphoglucan phosphatase LSF1, chloroplastic","starch catabolic process [GO:0005983]","-","protein tyrosine/serine/threonine phosphatase activity [GO:0008138]","protein tyrosine/serine/threonine phosphatase activity [GO:0008138]; starch catabolic process [GO:0005983]"]
[4,9455626,"INDEL","ACTGGCCC","A","frameshift_variant","Vradi04g04300","phosphoglucan phosphatase LSF1, chloroplastic","starch catabolic process [GO:0005983]","-","protein tyrosine/serine/threonine phosphatase activity [GO:0008138]","protein tyrosine/serine/threonine phosphatase activity [GO:0008138]; starch catabolic process [GO:0005983]"]
[4,9480374,"SNP","G","T","stop_gained","Vradi04g04310","-","-","-","-","-"]
[4,9752837,"INDEL","AT","A","frameshift_variant","Vradi04g04390","-","-","-","-","-"]
[4,9809389,"SNP","C","A","stop_gained","Vradi04g04420","-","-","-","-","-"]
[4,9810022,"INDEL","GA","G","frameshift_variant","Vradi04g04420","-","-","-","-","-"]
[4,9949069,"INDEL","T","TTCGGGTA","frameshift_variant","Vradi04g04490","uncharacterized protein LOC106758336","-","-","-","-"]
[4,10810939,"SNP","A","G","start_lost","Vradi04g04800","pentatricopeptide repeat-containing protein At2g15630, mitochondrial-like","-","-","-","-"]
[4,10811225,"INDEL","TG","T","frameshift_variant","Vradi04g04800","pentatricopeptide repeat-containing protein At2g15630, mitochondrial-like","-","-","-","-"]
[4,10811625,"INDEL","ATATTGCAGAGAGGGGAAAG","A","frameshift_variant","Vradi04g04800","pentatricopeptide repeat-containing protein At2g15630, mitochondrial-like","-","-","-","-"]
[4,10831787,"INDEL","T","TTTTTAA","stop_gained","Vradi04g04820","uncharacterized protein LOC106758980","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,10831791,"INDEL","T","TAGAAAAA","frameshift_variant&stop_gained","Vradi04g04820","uncharacterized protein LOC106758980","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,10882792,"INDEL","AAACC","A","frameshift_variant","Vradi04g04860","-","-","-","-","-"]
[4,10882804,"INDEL","C","CT","frameshift_variant","Vradi04g04860","-","-","-","-","-"]
[4,11097324,"INDEL","A","AT","frameshift_variant","Vradi04g04970","acyltransferase-like protein At3g26840, chloroplastic","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[4,11097325,"INDEL","G","GAT","frameshift_variant","Vradi04g04970","acyltransferase-like protein At3g26840, chloroplastic","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[4,11456115,"SNP","T","C","stop_lost","Vradi04g05140","-","-","-","-","-"]
[4,11456475,"SNP","C","T","stop_gained","Vradi04g05150","-","-","-","-","-"]
[4,11456502,"SNP","T","C","stop_lost","Vradi04g05150","-","-","-","-","-"]
[4,11521384,"INDEL","GAACTGCTCAAGCCTGTGGTATGCTCATTCGCCCTATATTTTTATCTGTTATGCAGAGTGTGCTGACTGTTGTTC","G","frameshift_variant&splice_donor_variant","Vradi04g05200","-","-","-","-","-"]
[4,11522446,"SNP","C","T","stop_gained","Vradi04g05200","-","-","-","-","-"]
[4,11592868,"INDEL","ATG","A","frameshift_variant","Vradi04g05260","-","-","-","-","-"]
[4,11604287,"INDEL","A","AG","splice_acceptor_variant","Vradi04g05270","LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At3g08570","protein ubiquitination [GO:0016567]","-","-","protein ubiquitination [GO:0016567]"]
[4,11610963,"INDEL","A","AGCTT","frameshift_variant&stop_gained","Vradi04g05280","4-hydroxybenzoate polyprenyltransferase, mitochondrial (4-HB polyprenyltransferase) (EC 2.5.1.39) (Para-hydroxybenzoate--polyprenyltransferase) (PHB:PPT) (PHB:polyprenyltransferase)","isoprenoid biosynthetic process [GO:0008299]; ubiquinone biosynthetic process [GO:0006744]","integral component of mitochondrial inner membrane [GO:0031305]","4-hydroxybenzoate decaprenyltransferase activity [GO:0002083]; 4-hydroxybenzoate nonaprenyltransferase activity [GO:0047293]","integral component of mitochondrial inner membrane [GO:0031305]; 4-hydroxybenzoate decaprenyltransferase activity [GO:0002083]; 4-hydroxybenzoate nonaprenyltransferase activity [GO:0047293]; isoprenoid biosynthetic process [GO:0008299]; ubiquinone biosynthetic process [GO:0006744]"]
[4,11610965,"INDEL","TTTTG","T","frameshift_variant","Vradi04g05280","4-hydroxybenzoate polyprenyltransferase, mitochondrial (4-HB polyprenyltransferase) (EC 2.5.1.39) (Para-hydroxybenzoate--polyprenyltransferase) (PHB:PPT) (PHB:polyprenyltransferase)","isoprenoid biosynthetic process [GO:0008299]; ubiquinone biosynthetic process [GO:0006744]","integral component of mitochondrial inner membrane [GO:0031305]","4-hydroxybenzoate decaprenyltransferase activity [GO:0002083]; 4-hydroxybenzoate nonaprenyltransferase activity [GO:0047293]","integral component of mitochondrial inner membrane [GO:0031305]; 4-hydroxybenzoate decaprenyltransferase activity [GO:0002083]; 4-hydroxybenzoate nonaprenyltransferase activity [GO:0047293]; isoprenoid biosynthetic process [GO:0008299]; ubiquinone biosynthetic process [GO:0006744]"]
[4,11610980,"SNP","C","T","splice_acceptor_variant","Vradi04g05280","4-hydroxybenzoate polyprenyltransferase, mitochondrial (4-HB polyprenyltransferase) (EC 2.5.1.39) (Para-hydroxybenzoate--polyprenyltransferase) (PHB:PPT) (PHB:polyprenyltransferase)","isoprenoid biosynthetic process [GO:0008299]; ubiquinone biosynthetic process [GO:0006744]","integral component of mitochondrial inner membrane [GO:0031305]","4-hydroxybenzoate decaprenyltransferase activity [GO:0002083]; 4-hydroxybenzoate nonaprenyltransferase activity [GO:0047293]","integral component of mitochondrial inner membrane [GO:0031305]; 4-hydroxybenzoate decaprenyltransferase activity [GO:0002083]; 4-hydroxybenzoate nonaprenyltransferase activity [GO:0047293]; isoprenoid biosynthetic process [GO:0008299]; ubiquinone biosynthetic process [GO:0006744]"]
[4,11759359,"SNP","A","G","splice_acceptor_variant","Vradi04g05430","uncharacterized protein LOC106770736","-","-","-","-"]
[4,11850729,"INDEL","GGAAGAAGAA","GGAAGAAGAAGAAGAA","start_lost","Vradi04g05470","vacuolar-sorting receptor 1","-","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]","calcium ion binding [GO:0005509]","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]; calcium ion binding [GO:0005509]"]
[4,12250995,"SNP","C","T","stop_gained","Vradi04g05730","myosin-M heavy chain","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,12259786,"INDEL","GCA","G","frameshift_variant","Vradi04g05740","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","signal transduction [GO:0007165]","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; signal transduction [GO:0007165]"]
[4,12259789,"INDEL","A","ACT","frameshift_variant","Vradi04g05740","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","signal transduction [GO:0007165]","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; signal transduction [GO:0007165]"]
[4,12342243,"INDEL","T","TGG","frameshift_variant","tRNA-Tyr","-","-","-","-","-"]
[4,12342245,"INDEL","AT","A","frameshift_variant","tRNA-Tyr","-","-","-","-","-"]
[4,12344686,"INDEL","GATTGATGAGGGGT","G","frameshift_variant","Vradi04g05790","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[4,12344702,"INDEL","G","GA","frameshift_variant","Vradi04g05790","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[4,12622589,"INDEL","CA","C","frameshift_variant","Vradi04g05880","regulatory-associated protein of TOR 1-like isoform X1","TOR signaling [GO:0031929]","TORC1 complex [GO:0031931]","-","TORC1 complex [GO:0031931]; TOR signaling [GO:0031929]"]
[4,12632419,"INDEL","ACT","A","frameshift_variant","Vradi04g05890","-","-","-","-","-"]
[4,12640049,"INDEL","C","CCT","frameshift_variant&stop_gained","Vradi04g05900","kinesin-like protein KIN-UA","microtubule-based movement [GO:0007018]; regulation of microtubule-based process [GO:0032886]; root development [GO:0048364]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]; regulation of microtubule-based process [GO:0032886]; root development [GO:0048364]"]
[4,12721735,"SNP","T","C","start_lost","Vradi04g05920","TOM1-like protein 6","intracellular protein transport [GO:0006886]","membrane [GO:0016020]","-","membrane [GO:0016020]; intracellular protein transport [GO:0006886]"]
[4,12754803,"SNP","C","G","stop_gained","Vradi04g05940","protein LURP-one-related 15-like isoform X3","-","-","-","-"]
[4,12965179,"SNP","C","T","splice_donor_variant","Vradi04g05980","-","-","-","-","-"]
[4,13241436,"SNP","G","A","splice_acceptor_variant","Vradi04g06030","S-protein homolog","rejection of self pollen [GO:0060320]","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]; rejection of self pollen [GO:0060320]"]
[4,13241510,"INDEL","GGT","G","frameshift_variant","Vradi04g06030","S-protein homolog","rejection of self pollen [GO:0060320]","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]; rejection of self pollen [GO:0060320]"]
[4,13241564,"INDEL","CCT","C","frameshift_variant","Vradi04g06030","S-protein homolog","rejection of self pollen [GO:0060320]","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]; rejection of self pollen [GO:0060320]"]
[4,13241568,"INDEL","T","TGC","frameshift_variant","Vradi04g06030","S-protein homolog","rejection of self pollen [GO:0060320]","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]; rejection of self pollen [GO:0060320]"]
[4,13490078,"INDEL","G","GCT","frameshift_variant","Vradi04g06160","-","-","-","-","-"]
[4,13490084,"INDEL","AAT","A","frameshift_variant","Vradi04g06160","-","-","-","-","-"]
[4,14465772,"INDEL","T","TGC","frameshift_variant","Vradi04g06730","gibberellin 20-oxidase-like protein","-","-","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]"]
[4,14465773,"INDEL","TTC","T","frameshift_variant","Vradi04g06730","gibberellin 20-oxidase-like protein","-","-","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]"]
[4,14476462,"INDEL","TA","T","frameshift_variant","Vradi04g06740","rop guanine nucleotide exchange factor 3-like isoform X1","-","-","guanyl-nucleotide exchange factor activity [GO:0005085]","guanyl-nucleotide exchange factor activity [GO:0005085]"]
[4,14480293,"INDEL","GCT","G","frameshift_variant","Vradi04g06750","uncharacterized protein LOC106759284","-","-","-","-"]
[4,14480297,"INDEL","A","AAC","frameshift_variant","Vradi04g06750","uncharacterized protein LOC106759284","-","-","-","-"]
[4,14480333,"SNP","G","C","stop_gained","Vradi04g06750","uncharacterized protein LOC106759284","-","-","-","-"]
[4,14522812,"INDEL","T","TG","frameshift_variant","Vradi04g06760","-","-","-","-","-"]
[4,14618099,"INDEL","G","GTAGCCA","splice_donor_variant","Vradi04g06820","uncharacterized protein LOC106759510","-","-","-","-"]
[4,14642049,"SNP","C","A","stop_gained","Vradi04g06840","Translation factor GUF1 homolog, mitochondrial (EC 3.6.5.n1) (Elongation factor 4 homolog) (EF-4) (GTPase GUF1 homolog) (Ribosomal back-translocase)","positive regulation of translation [GO:0045727]; translation [GO:0006412]","chloroplast [GO:0009507]; mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759]","GTPase activity [GO:0003924]; GTP binding [GO:0005525]; ribosome binding [GO:0043022]","chloroplast [GO:0009507]; mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; positive regulation of translation [GO:0045727]; translation [GO:0006412]"]
[4,14789635,"INDEL","A","ACTCTGACCACAGGGTGCTCCAGAATGCTCACAATGTTCACCACCAAATCCAGGGGACATTTGCATGAGTACTTCTCTCCTTGAACAATTTCCTCACAAGTTCCCCCATGCTCACACCAGAAGGAGTTTGTTCCATCACACATAGTCATTTCTTCACCACAAAACTTACCCCTGCAGT","stop_gained","Vradi04g06920","-","-","-","-","-"]
[4,15122154,"SNP","G","A","splice_donor_variant","Vradi04g07140","glutamic acid-rich protein-like","-","-","-","-"]
[4,15333828,"SNP","G","A","stop_gained","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15333840,"INDEL","C","CA","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15333842,"INDEL","TCG","T","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15333845,"INDEL","G","GAA","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15333851,"INDEL","TC","T","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15333861,"SNP","C","A","stop_gained","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15333879,"SNP","G","A","stop_gained","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334784,"INDEL","TG","T","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334794,"SNP","C","T","stop_gained","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334817,"SNP","C","A","stop_gained","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334839,"INDEL","A","ATT","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334843,"INDEL","CCG","C","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334886,"SNP","G","A","stop_gained","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334942,"INDEL","TCC","T","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334946,"INDEL","T","TG","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15334949,"INDEL","ATCCTATGTTGTCTCCGAGC","A","frameshift_variant","Vradi04g07300","protein EDS1L","defense response [GO:0006952]; lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; defense response [GO:0006952]; lipid metabolic process [GO:0006629]"]
[4,15684213,"INDEL","A","AC","frameshift_variant","Vradi04g07490","RING-H2 finger protein ATL32-like","protein ubiquitination [GO:0016567]","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]; protein ubiquitination [GO:0016567]"]
[4,15684214,"INDEL","G","GTGGTGTCATGGGCGCAC","frameshift_variant","Vradi04g07490","RING-H2 finger protein ATL32-like","protein ubiquitination [GO:0016567]","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]; protein ubiquitination [GO:0016567]"]
[4,15690898,"INDEL","A","AC","frameshift_variant","Vradi04g07500","-","-","-","-","-"]
[4,15690988,"INDEL","GT","G","frameshift_variant","Vradi04g07500","-","-","-","-","-"]
[4,15691202,"INDEL","A","AGGGG","frameshift_variant","Vradi04g07500","-","-","-","-","-"]
[4,15691206,"INDEL","GTAA","GAA","frameshift_variant","Vradi04g07500","-","-","-","-","-"]
[4,15691312,"INDEL","T","TC","frameshift_variant","Vradi04g07500","-","-","-","-","-"]
[4,15691727,"SNP","G","A","splice_donor_variant","Vradi04g07500","-","-","-","-","-"]
[4,15779873,"INDEL","G","GTA","frameshift_variant","Vradi04g07580","uncharacterized protein LOC106759255","-","-","-","-"]
[4,16090249,"SNP","G","A","stop_gained","Vradi04g07840","-","-","-","-","-"]
[4,16111429,"INDEL","CT","C","frameshift_variant","Vradi04g07850","Acyl carrier protein","fatty acid biosynthetic process [GO:0006633]","-","-","fatty acid biosynthetic process [GO:0006633]"]
[4,16290044,"INDEL","TC","T","frameshift_variant","Vradi04g07980","Vacuolar proton pump subunit B (V-ATPase subunit B) (Vacuolar proton pump subunit B)","ATP metabolic process [GO:0046034]; proton transmembrane transport [GO:1902600]","proton-transporting V-type ATPase, V1 domain [GO:0033180]","ATP binding [GO:0005524]; hydrolase activity [GO:0016787]","proton-transporting V-type ATPase, V1 domain [GO:0033180]; ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; ATP metabolic process [GO:0046034]; proton transmembrane transport [GO:1902600]"]
[4,16290049,"INDEL","G","GT","frameshift_variant","Vradi04g07980","Vacuolar proton pump subunit B (V-ATPase subunit B) (Vacuolar proton pump subunit B)","ATP metabolic process [GO:0046034]; proton transmembrane transport [GO:1902600]","proton-transporting V-type ATPase, V1 domain [GO:0033180]","ATP binding [GO:0005524]; hydrolase activity [GO:0016787]","proton-transporting V-type ATPase, V1 domain [GO:0033180]; ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; ATP metabolic process [GO:0046034]; proton transmembrane transport [GO:1902600]"]
[4,16317335,"INDEL","CA","C","frameshift_variant","Vradi04g08010","uncharacterized protein LOC106759107","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,16335558,"INDEL","A","AAG","frameshift_variant","Vradi04g08040","uncharacterized protein LOC106758992 isoform X1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,16335563,"INDEL","TAA","T","frameshift_variant","Vradi04g08040","uncharacterized protein LOC106758992 isoform X1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,16408282,"SNP","G","A","stop_gained","Vradi04g08130","transcription termination factor MTEF1, chloroplastic","DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]","-","double-stranded DNA binding [GO:0003690]","double-stranded DNA binding [GO:0003690]; DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]"]
[4,16481738,"SNP","A","C","stop_gained","Vradi04g08170","subtilisin-like protease Glyma18g48580","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[4,16482247,"INDEL","A","AAATT","frameshift_variant&stop_gained","Vradi04g08170","subtilisin-like protease Glyma18g48580","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[4,16483747,"INDEL","AAT","A","frameshift_variant","Vradi04g08170","subtilisin-like protease Glyma18g48580","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[4,16483748,"INDEL","T","TCC","frameshift_variant","Vradi04g08170","subtilisin-like protease Glyma18g48580","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[4,16484024,"SNP","*","G","frameshift_variant","Vradi04g08170","subtilisin-like protease Glyma18g48580","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[4,16484031,"INDEL","GGAGA","G","frameshift_variant","Vradi04g08170","subtilisin-like protease Glyma18g48580","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[4,16510535,"INDEL","CAG","C","frameshift_variant","Vradi04g08180","MDIS1-interacting receptor like kinase 2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,16510536,"INDEL","G","GAC","frameshift_variant","Vradi04g08180","MDIS1-interacting receptor like kinase 2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,16510589,"INDEL","GAATA","G","frameshift_variant","Vradi04g08180","MDIS1-interacting receptor like kinase 2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,16510591,"INDEL","T","TTTCC","frameshift_variant","Vradi04g08180","MDIS1-interacting receptor like kinase 2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,16510804,"INDEL","T","TGG","frameshift_variant","Vradi04g08180","MDIS1-interacting receptor like kinase 2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,16510808,"INDEL","AAC","A","frameshift_variant","Vradi04g08180","MDIS1-interacting receptor like kinase 2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,16516405,"INDEL","AC","A","frameshift_variant","Vradi04g08190","-","-","-","-","-"]
[4,16516523,"INDEL","A","AT","frameshift_variant","Vradi04g08190","-","-","-","-","-"]
[4,16516525,"INDEL","T","TG","frameshift_variant","Vradi04g08190","-","-","-","-","-"]
[4,16554587,"SNP","C","T","stop_gained","Vradi04g08220","-","-","-","-","-"]
[4,16718197,"INDEL","A","AT","frameshift_variant&stop_gained","Vradi04g08290","COP9 signalosome complex subunit 7 isoform X3","-","-","-","-"]
[4,17021536,"SNP","C","T","splice_donor_variant","Vradi04g08510","outer plastidial membrane protein porin","-","mitochondrial outer membrane [GO:0005741]","voltage-gated anion channel activity [GO:0008308]","mitochondrial outer membrane [GO:0005741]; voltage-gated anion channel activity [GO:0008308]"]
[4,17052188,"SNP","G","T","stop_gained","Vradi04g08540","receptor like protein 30","-","-","-","-"]
[4,17053227,"INDEL","AG","A","frameshift_variant","Vradi04g08540","receptor like protein 30","-","-","-","-"]
[4,17053239,"INDEL","A","AT","frameshift_variant","Vradi04g08540","receptor like protein 30","-","-","-","-"]
[4,17053266,"SNP","G","A","stop_gained","Vradi04g08540","receptor like protein 30","-","-","-","-"]
[4,17053426,"INDEL","TCTCCACATCCA","T","frameshift_variant","Vradi04g08540","receptor like protein 30","-","-","-","-"]
[4,17053616,"SNP","A","T","stop_gained","Vradi04g08540","receptor like protein 30","-","-","-","-"]
[4,17072607,"INDEL","TATGGCTTG","T","frameshift_variant","Vradi04g08570","Cysteine dioxygenase (EC 1.13.11.20)","-","-","cysteine dioxygenase activity [GO:0017172]; metal ion binding [GO:0046872]","cysteine dioxygenase activity [GO:0017172]; metal ion binding [GO:0046872]"]
[4,17072640,"SNP","G","A","stop_gained","Vradi04g08570","Cysteine dioxygenase (EC 1.13.11.20)","-","-","cysteine dioxygenase activity [GO:0017172]; metal ion binding [GO:0046872]","cysteine dioxygenase activity [GO:0017172]; metal ion binding [GO:0046872]"]
[4,17142353,"SNP","C","A","stop_gained","Vradi04g08650","homeobox-leucine zipper protein ATHB-23 isoform X1","-","nucleus [GO:0005634]","DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]"]
[4,17142532,"SNP","C","T","stop_gained","Vradi04g08650","homeobox-leucine zipper protein ATHB-23 isoform X1","-","nucleus [GO:0005634]","DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]"]
[4,17143780,"INDEL","AC","A","frameshift_variant","Vradi04g08650","homeobox-leucine zipper protein ATHB-23 isoform X1","-","nucleus [GO:0005634]","DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]"]
[4,17431921,"INDEL","AC","A","frameshift_variant","Vradi04g08770","-","-","-","-","-"]
[4,17431994,"INDEL","GT","G","frameshift_variant","Vradi04g08770","-","-","-","-","-"]
[4,17432003,"INDEL","T","TCAAC","frameshift_variant","Vradi04g08770","-","-","-","-","-"]
[4,17432025,"SNP","A","T","stop_gained","Vradi04g08770","-","-","-","-","-"]
[4,17521758,"INDEL","GACAAGTAAGTC","G","frameshift_variant","Vradi04g08830","cyclic dof factor 2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[4,17521794,"INDEL","AG","A","frameshift_variant","Vradi04g08830","cyclic dof factor 2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[4,17692063,"SNP","C","A","stop_gained","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692150,"INDEL","GCAATTGCACCGATA","G","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692213,"INDEL","A","AC","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692223,"INDEL","TCG","T","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692226,"INDEL","TAGAAGCAG","T","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692236,"INDEL","AAACT","A","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692242,"INDEL","CAA","C","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692249,"INDEL","TA","T","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692254,"SNP","G","A","splice_donor_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17692255,"SNP","T","A","splice_donor_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,17694858,"INDEL","AT","A","frameshift_variant","Vradi04g08970","CSC1-like protein HYP1","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; ion transport [GO:0006811]"]
[4,18261615,"SNP","A","G","start_lost","Vradi04g09330","-","-","-","-","-"]
[4,18283186,"INDEL","T","TG","frameshift_variant","Vradi04g09350","uncharacterized protein LOC111241467","-","-","-","-"]
[4,18283214,"INDEL","A","ACG","frameshift_variant","Vradi04g09350","uncharacterized protein LOC111241467","-","-","-","-"]
[4,18283217,"INDEL","CGG","C","frameshift_variant","Vradi04g09350","uncharacterized protein LOC111241467","-","-","-","-"]
[4,18308614,"INDEL","ACCTTG","A","frameshift_variant","Vradi04g09360","uncharacterized protein LOC106759047","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,18308662,"INDEL","C","CT","frameshift_variant","Vradi04g09360","uncharacterized protein LOC106759047","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[4,18387706,"INDEL","AC","A","frameshift_variant","Vradi04g09400","receptor-like protein kinase FERONIA","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[4,18395317,"INDEL","T","TCG","frameshift_variant","Vradi04g09410","receptor-like protein 12","-","-","-","-"]
[4,18395320,"INDEL","TAC","T","frameshift_variant","Vradi04g09410","receptor-like protein 12","-","-","-","-"]
[4,18410891,"INDEL","GTGCT","G","frameshift_variant","Vradi04g09440","COBRA-like protein","cellulose microfibril organization [GO:0010215]","anchored component of membrane [GO:0031225]","-","anchored component of membrane [GO:0031225]; cellulose microfibril organization [GO:0010215]"]
[4,18459815,"INDEL","ATT","A","frameshift_variant&stop_lost","Vradi04g09490","protein DOWNY MILDEW RESISTANCE 6-like","-","-","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]"]
[4,18490034,"INDEL","CA","C","frameshift_variant","Vradi04g09520","developmental protein SEPALLATA 1 isoform X1","positive regulation of transcription by RNA polymerase II [GO:0045944]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]; positive regulation of transcription by RNA polymerase II [GO:0045944]"]
[4,18598203,"INDEL","CTA","C","frameshift_variant","Vradi04g09620","pentatricopeptide repeat-containing protein At3g46790, chloroplastic","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18607131,"INDEL","T","TA","frameshift_variant","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18607194,"SNP","G","A","stop_gained","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18607211,"SNP","G","T","stop_gained","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18607264,"SNP","T","A","stop_gained","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18607302,"SNP","G","A","stop_gained","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18607321,"INDEL","GGA","G","frameshift_variant","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18608453,"INDEL","CA","C","frameshift_variant","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18608474,"SNP","C","T","stop_gained","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18608837,"SNP","C","T","stop_gained","Vradi04g09630","auxin transport protein BIG","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[4,18633425,"INDEL","GTT","G","splice_donor_variant","Vradi04g09650","transcription factor BIM2","transcription, DNA-templated [GO:0006351]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; transcription, DNA-templated [GO:0006351]"]
[4,18665068,"INDEL","TCAGAA","T","frameshift_variant","Vradi04g09690","uncharacterized protein LOC106759083","-","-","-","-"]
[4,18702030,"INDEL","TC","T","frameshift_variant","Vradi04g09720","DNA-directed RNA polymerase (EC 2.7.7.6)","transcription, DNA-templated [GO:0006351]","-","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]; transcription, DNA-templated [GO:0006351]"]
[4,18794600,"SNP","T","C","splice_donor_variant","Vradi04g09830","-","-","-","-","-"]
[4,18916362,"INDEL","G","GC","frameshift_variant","Vradi04g09970","protein FLX-like 2","cell differentiation [GO:0030154]; multicellular organism development [GO:0007275]","-","-","cell differentiation [GO:0030154]; multicellular organism development [GO:0007275]"]
[4,18917928,"SNP","C","A","stop_gained","Vradi04g09970","protein FLX-like 2","cell differentiation [GO:0030154]; multicellular organism development [GO:0007275]","-","-","cell differentiation [GO:0030154]; multicellular organism development [GO:0007275]"]
[4,18918867,"INDEL","T","TTA","frameshift_variant&stop_gained","Vradi04g09970","protein FLX-like 2","cell differentiation [GO:0030154]; multicellular organism development [GO:0007275]","-","-","cell differentiation [GO:0030154]; multicellular organism development [GO:0007275]"]
[4,19007416,"SNP","A","T","stop_gained","Vradi04g10010","LOW QUALITY PROTEIN: protein CROWDED NUCLEI 1","nucleus organization [GO:0006997]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; nucleus organization [GO:0006997]"]
[4,19007958,"INDEL","C","CAT","frameshift_variant&start_lost","Vradi04g10010","LOW QUALITY PROTEIN: protein CROWDED NUCLEI 1","nucleus organization [GO:0006997]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; nucleus organization [GO:0006997]"]
[4,19089073,"INDEL","CT","C","frameshift_variant","Vradi04g10080","N-alpha-acetyltransferase MAK3","-","-","N-acetyltransferase activity [GO:0008080]","N-acetyltransferase activity [GO:0008080]"]
[4,19089075,"INDEL","GAA","G","frameshift_variant","Vradi04g10080","N-alpha-acetyltransferase MAK3","-","-","N-acetyltransferase activity [GO:0008080]","N-acetyltransferase activity [GO:0008080]"]
[4,19298526,"INDEL","AT","A","frameshift_variant","Vradi04g10240","probable xyloglucan galactosyltransferase GT15","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]; protein glycosylation [GO:0006486]"]
[4,19308396,"SNP","T","A","splice_donor_variant","Vradi04g10260","uncharacterized protein LOC106758037 isoform X1","-","-","-","-"]
[4,19433768,"INDEL","C","CCA","frameshift_variant","Vradi04g10410","Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1)","spliceosomal snRNP assembly [GO:0000387]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; spliceosomal snRNP assembly [GO:0000387]"]
[4,19458602,"INDEL","T","TG","frameshift_variant","Vradi04g10440","-","-","-","-","-"]
[4,19613872,"INDEL","T","TGCTC","frameshift_variant","Vradi04g10600","2-oxoglutarate dehydrogenase, mitochondrial","tricarboxylic acid cycle [GO:0006099]","-","oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]","oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]; tricarboxylic acid cycle [GO:0006099]"]
[4,19613874,"INDEL","TCCAA","T","frameshift_variant","Vradi04g10600","2-oxoglutarate dehydrogenase, mitochondrial","tricarboxylic acid cycle [GO:0006099]","-","oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]","oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]; tricarboxylic acid cycle [GO:0006099]"]
[4,19757674,"INDEL","A","AATGTTTTTGCCTATATG","frameshift_variant","Vradi04g10760","CRM-domain containing factor CFM2, chloroplastic isoform X1","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[4,19768708,"INDEL","CAT","C","frameshift_variant","Vradi04g10770","transcription initiation factor TFIID subunit 6","transcription initiation from RNA polymerase II promoter [GO:0006367]","SAGA complex [GO:0000124]; SLIK (SAGA-like) complex [GO:0046695]; transcription factor TFIID complex [GO:0005669]","protein heterodimerization activity [GO:0046982]; RNA polymerase II general transcription initiation factor activity [GO:0016251]; translation initiation factor activity [GO:0003743]","SAGA complex [GO:0000124]; SLIK (SAGA-like) complex [GO:0046695]; transcription factor TFIID complex [GO:0005669]; protein heterodimerization activity [GO:0046982]; RNA polymerase II general transcription initiation factor activity [GO:0016251]; translation initiation factor activity [GO:0003743]; transcription initiation from RNA polymerase II promoter [GO:0006367]"]
[4,19768731,"SNP","G","T","stop_gained","Vradi04g10770","transcription initiation factor TFIID subunit 6","transcription initiation from RNA polymerase II promoter [GO:0006367]","SAGA complex [GO:0000124]; SLIK (SAGA-like) complex [GO:0046695]; transcription factor TFIID complex [GO:0005669]","protein heterodimerization activity [GO:0046982]; RNA polymerase II general transcription initiation factor activity [GO:0016251]; translation initiation factor activity [GO:0003743]","SAGA complex [GO:0000124]; SLIK (SAGA-like) complex [GO:0046695]; transcription factor TFIID complex [GO:0005669]; protein heterodimerization activity [GO:0046982]; RNA polymerase II general transcription initiation factor activity [GO:0016251]; translation initiation factor activity [GO:0003743]; transcription initiation from RNA polymerase II promoter [GO:0006367]"]
[4,19834279,"SNP","G","A","stop_gained","Vradi04g10800","-","-","-","-","-"]
[4,19941690,"INDEL","C","CA","frameshift_variant","Vradi04g10900","uncharacterized protein LOC106758892","-","-","-","-"]
[4,19943159,"SNP","A","T","splice_acceptor_variant","Vradi04g10900","uncharacterized protein LOC106758892","-","-","-","-"]
[4,19990444,"INDEL","A","AT","frameshift_variant","Vradi04g10960","-","-","-","-","-"]
[4,20010127,"SNP","G","A","splice_donor_variant","Vradi04g10980","uncharacterized protein LOC106758766","-","-","-","-"]
[4,20010735,"INDEL","C","CA","frameshift_variant","Vradi04g10980","uncharacterized protein LOC106758766","-","-","-","-"]
[4,20079189,"INDEL","GT","G","frameshift_variant","Vradi04g11060","probable non-specific lipid-transfer protein AKCS9","lipid transport [GO:0006869]","-","-","lipid transport [GO:0006869]"]
[4,20079191,"INDEL","C","CAA","frameshift_variant","Vradi04g11060","probable non-specific lipid-transfer protein AKCS9","lipid transport [GO:0006869]","-","-","lipid transport [GO:0006869]"]
[4,20079192,"INDEL","GACCCT","G","frameshift_variant","Vradi04g11060","probable non-specific lipid-transfer protein AKCS9","lipid transport [GO:0006869]","-","-","lipid transport [GO:0006869]"]
[4,20079200,"INDEL","CCT","C","frameshift_variant","Vradi04g11060","probable non-specific lipid-transfer protein AKCS9","lipid transport [GO:0006869]","-","-","lipid transport [GO:0006869]"]
[4,20079203,"INDEL","GTT","G","frameshift_variant","Vradi04g11060","probable non-specific lipid-transfer protein AKCS9","lipid transport [GO:0006869]","-","-","lipid transport [GO:0006869]"]
[4,20079261,"INDEL","C","CGT","frameshift_variant","Vradi04g11060","probable non-specific lipid-transfer protein AKCS9","lipid transport [GO:0006869]","-","-","lipid transport [GO:0006869]"]
[4,20079262,"INDEL","CAA","C","frameshift_variant","Vradi04g11060","probable non-specific lipid-transfer protein AKCS9","lipid transport [GO:0006869]","-","-","lipid transport [GO:0006869]"]
[4,20087921,"INDEL","ACG","A","frameshift_variant","Vradi04g11070","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[4,20087926,"INDEL","CT","C","frameshift_variant","Vradi04g11070","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[4,20087949,"INDEL","A","ATATAATTCAATCC","frameshift_variant&stop_gained","Vradi04g11070","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[4,20087952,"INDEL","G","GT","frameshift_variant","Vradi04g11070","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","-","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[4,20289913,"INDEL","TATTGGAATGGAACAGAACCGAGGCTTTGTCTCACTG","T","stop_gained","Vradi04g11230","-","-","-","-","-"]
[4,20289996,"INDEL","TG","T","frameshift_variant","Vradi04g11230","-","-","-","-","-"]
[4,20290008,"SNP","G","A","stop_gained","Vradi04g11230","-","-","-","-","-"]
[4,20290009,"SNP","C","T","stop_gained","Vradi04g11230","-","-","-","-","-"]
[4,20290019,"INDEL","AG","A","frameshift_variant","Vradi04g11230","-","-","-","-","-"]
[4,20290255,"INDEL","GC","G","frameshift_variant","Vradi04g11230","-","-","-","-","-"]
[4,20290421,"INDEL","TC","T","frameshift_variant","Vradi04g11230","-","-","-","-","-"]
[4,20438351,"SNP","A","G","splice_donor_variant","Vradi04g11350","heparan-alpha-glucosaminide N-acetyltransferase","-","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]"]
[4,20439211,"INDEL","TG","T","frameshift_variant","Vradi04g11350","heparan-alpha-glucosaminide N-acetyltransferase","-","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]"]
[4,20615161,"SNP","T","C","splice_donor_variant","Vradi04g11440","-","-","-","-","-"]
[4,20623280,"SNP","G","A","splice_acceptor_variant","Vradi04g11460","DExH-box ATP-dependent RNA helicase DExH9 isoform X1","RNA catabolic process [GO:0006401]","-","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; RNA catabolic process [GO:0006401]"]
[5,293186,"SNP","G","A","stop_gained","Vradi05g00230","tyrosine-sulfated glycopeptide receptor 1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,293246,"INDEL","CGAGACCCCTGGATG","C","frameshift_variant","Vradi05g00230","tyrosine-sulfated glycopeptide receptor 1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,299841,"INDEL","A","AC","frameshift_variant","Vradi05g00240","uncharacterized protein C594.04c","lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]","oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]","integral component of membrane [GO:0016021]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]; lipid metabolic process [GO:0006629]"]
[5,351392,"INDEL","T","TAGAGCAATATTAGTAGCATAAACATGTCCAAAATGACAACAAATGCATGGCATGAG","frameshift_variant","Vradi05g00290","Inorganic diphosphatase (EC 3.6.1.1)","phosphate-containing compound metabolic process [GO:0006796]","cytoplasm [GO:0005737]","inorganic diphosphatase activity [GO:0004427]; magnesium ion binding [GO:0000287]","cytoplasm [GO:0005737]; inorganic diphosphatase activity [GO:0004427]; magnesium ion binding [GO:0000287]; phosphate-containing compound metabolic process [GO:0006796]"]
[5,429446,"SNP","A","G","stop_lost","Vradi05g00390","Pyruvate dehydrogenase E1 component subunit alpha (EC 1.2.4.1)","acetyl-CoA biosynthetic process from pyruvate [GO:0006086]; glycolytic process [GO:0006096]","intracellular membrane-bounded organelle [GO:0043231]","pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]","intracellular membrane-bounded organelle [GO:0043231]; pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]; acetyl-CoA biosynthetic process from pyruvate [GO:0006086]; glycolytic process [GO:0006096]"]
[5,581133,"INDEL","CT","C","frameshift_variant","Vradi05g00520","-","-","-","-","-"]
[5,687388,"SNP","A","T","stop_gained","tRNA-Pro","-","-","-","-","-"]
[5,787294,"INDEL","T","TA","frameshift_variant","Vradi05g00680","major allergen Pru av 1","abscisic acid-activated signaling pathway [GO:0009738]; defense response [GO:0006952]","-","abscisic acid binding [GO:0010427]; protein phosphatase inhibitor activity [GO:0004864]; signaling receptor activity [GO:0038023]","abscisic acid binding [GO:0010427]; protein phosphatase inhibitor activity [GO:0004864]; signaling receptor activity [GO:0038023]; abscisic acid-activated signaling pathway [GO:0009738]; defense response [GO:0006952]"]
[5,1155399,"SNP","G","A","splice_acceptor_variant","Vradi05g01090","vesicle-associated membrane protein 724 isoform X1","protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]"]
[5,1404607,"INDEL","G","GTACA","splice_donor_variant","Vradi05g01310","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[5,1972174,"INDEL","TTGGTA","T","frameshift_variant&splice_donor_variant","Vradi05g01710","protein INAPERTURATE POLLEN1","transcription, DNA-templated [GO:0006351]","-","sequence-specific DNA binding [GO:0043565]","sequence-specific DNA binding [GO:0043565]; transcription, DNA-templated [GO:0006351]"]
[5,1977358,"INDEL","CT","C","frameshift_variant","Vradi05g01710","protein INAPERTURATE POLLEN1","transcription, DNA-templated [GO:0006351]","-","sequence-specific DNA binding [GO:0043565]","sequence-specific DNA binding [GO:0043565]; transcription, DNA-templated [GO:0006351]"]
[5,1977487,"INDEL","CT","C","frameshift_variant","Vradi05g01710","protein INAPERTURATE POLLEN1","transcription, DNA-templated [GO:0006351]","-","sequence-specific DNA binding [GO:0043565]","sequence-specific DNA binding [GO:0043565]; transcription, DNA-templated [GO:0006351]"]
[5,1977607,"INDEL","TTAAG","T","splice_donor_variant","Vradi05g01710","protein INAPERTURATE POLLEN1","transcription, DNA-templated [GO:0006351]","-","sequence-specific DNA binding [GO:0043565]","sequence-specific DNA binding [GO:0043565]; transcription, DNA-templated [GO:0006351]"]
[5,1978046,"SNP","C","T","stop_gained","Vradi05g01710","protein INAPERTURATE POLLEN1","transcription, DNA-templated [GO:0006351]","-","sequence-specific DNA binding [GO:0043565]","sequence-specific DNA binding [GO:0043565]; transcription, DNA-templated [GO:0006351]"]
[5,1978211,"INDEL","A","AGC","frameshift_variant","Vradi05g01710","protein INAPERTURATE POLLEN1","transcription, DNA-templated [GO:0006351]","-","sequence-specific DNA binding [GO:0043565]","sequence-specific DNA binding [GO:0043565]; transcription, DNA-templated [GO:0006351]"]
[5,2043571,"SNP","C","T","stop_gained","Vradi05g01750","pectinesterase inhibitor 3","-","-","enzyme inhibitor activity [GO:0004857]","enzyme inhibitor activity [GO:0004857]"]
[5,2080956,"INDEL","AG","A","splice_acceptor_variant","Vradi05g01770","C-type lectin receptor-like tyrosine-protein kinase At1g52310 isoform X3","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein tyrosine kinase activity [GO:0004713]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein tyrosine kinase activity [GO:0004713]"]
[5,2453741,"INDEL","TA","T","frameshift_variant","Vradi05g02070","uncharacterized protein LOC106762261 isoform X1","-","-","-","-"]
[5,2646012,"INDEL","CAG","C","frameshift_variant","Vradi05g02200","protein PLASTID MOVEMENT IMPAIRED 1-like","-","-","-","-"]
[5,2646041,"SNP","C","T","stop_gained","Vradi05g02200","protein PLASTID MOVEMENT IMPAIRED 1-like","-","-","-","-"]
[5,2646279,"SNP","G","A","stop_gained","Vradi05g02200","protein PLASTID MOVEMENT IMPAIRED 1-like","-","-","-","-"]
[5,2661708,"INDEL","AC","A","frameshift_variant","Vradi05g02220","uncharacterized protein LOC106761755","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,2661711,"SNP","C","A","stop_gained","Vradi05g02220","uncharacterized protein LOC106761755","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,2661783,"SNP","G","A","stop_gained","Vradi05g02220","uncharacterized protein LOC106761755","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,2661822,"SNP","G","A","stop_gained","Vradi05g02220","uncharacterized protein LOC106761755","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,2661836,"INDEL","CGTCTGGCA","C","frameshift_variant","Vradi05g02220","uncharacterized protein LOC106761755","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,2661898,"SNP","G","T","stop_gained","Vradi05g02220","uncharacterized protein LOC106761755","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,2792946,"INDEL","TCATTCTTATTTTATG","T","frameshift_variant&splice_acceptor_variant","Vradi05g02330","O-acyltransferase","triglyceride biosynthetic process [GO:0019432]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","diacylglycerol O-acyltransferase activity [GO:0004144]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; diacylglycerol O-acyltransferase activity [GO:0004144]; triglyceride biosynthetic process [GO:0019432]"]
[5,2841587,"INDEL","G","GGTACGGTGATCATTTT","splice_donor_variant","Vradi05g02380","nucleosome assembly protein 13-like","nucleosome assembly [GO:0006334]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; nucleosome assembly [GO:0006334]"]
[5,2844719,"INDEL","AATGATGGTGATTTGTTGGT","A","splice_acceptor_variant","Vradi05g02390","DNA repair protein recA homolog 3, mitochondrial-like","DNA recombination [GO:0006310]; DNA repair [GO:0006281]","-","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]"]
[5,3696849,"SNP","A","T","stop_gained","Vradi05g02890","lysine-specific demethylase JMJ18-like","methylation [GO:0032259]","nucleus [GO:0005634]","methyltransferase activity [GO:0008168]","nucleus [GO:0005634]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[5,3698379,"INDEL","TAGAGTACTGG","T","frameshift_variant","Vradi05g02890","lysine-specific demethylase JMJ18-like","methylation [GO:0032259]","nucleus [GO:0005634]","methyltransferase activity [GO:0008168]","nucleus [GO:0005634]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[5,3706756,"SNP","G","T","stop_gained","Vradi05g02900","gamma-soluble NSF attachment protein","intracellular protein transport [GO:0006886]","-","-","intracellular protein transport [GO:0006886]"]
[5,4566776,"SNP","G","A","stop_gained","Vradi05g03470","LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19290","-","-","-","-"]
[5,4566817,"INDEL","A","AC","frameshift_variant","Vradi05g03470","LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19290","-","-","-","-"]
[5,4566858,"INDEL","GA","G","frameshift_variant","Vradi05g03470","LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19290","-","-","-","-"]
[5,4567015,"INDEL","A","AAGTTGTTGGTGCAGTGAAGGGAG","frameshift_variant","Vradi05g03470","LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19290","-","-","-","-"]
[5,4567169,"INDEL","G","GGGCGGCGGCGGGGTGAAGGCGGA","frameshift_variant","Vradi05g03470","LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19290","-","-","-","-"]
[5,4583083,"INDEL","A","ATC","frameshift_variant","Vradi05g03490","protein MEI2-like 5","meiotic cell cycle [GO:0051321]; positive regulation of growth [GO:0045927]; positive regulation of meiotic nuclear division [GO:0045836]","-","mRNA binding [GO:0003729]","mRNA binding [GO:0003729]; meiotic cell cycle [GO:0051321]; positive regulation of growth [GO:0045927]; positive regulation of meiotic nuclear division [GO:0045836]"]
[5,4715219,"INDEL","TCTCTAGCCACCATTCGAACATCCCAGACACGTATACTGCCATCAGATGATCCAGATGCCACC","T","frameshift_variant","Vradi05g03590","p21-activated protein kinase-interacting protein 1","-","Cul4-RING E3 ubiquitin ligase complex [GO:0080008]; nucleolus [GO:0005730]","kinase activity [GO:0016301]","Cul4-RING E3 ubiquitin ligase complex [GO:0080008]; nucleolus [GO:0005730]; kinase activity [GO:0016301]"]
[5,4740840,"INDEL","C","CTATTTTTCAA","splice_acceptor_variant","Vradi05g03610","-","-","-","-","-"]
[5,5176643,"SNP","C","T","stop_gained","Vradi05g03780","uncharacterized protein LOC106761917","chromatin organization [GO:0006325]","nucleus [GO:0005634]","chromatin binding [GO:0003682]","nucleus [GO:0005634]; chromatin binding [GO:0003682]; chromatin organization [GO:0006325]"]
[5,5236129,"SNP","G","C","stop_gained","Vradi05g03810","Resistant specific protein-2","-","-","-","-"]
[5,5236401,"SNP","G","A","stop_gained","Vradi05g03810","Resistant specific protein-2","-","-","-","-"]
[5,5236531,"INDEL","G","GTT","frameshift_variant","Vradi05g03810","Resistant specific protein-2","-","-","-","-"]
[5,5279158,"SNP","C","G","splice_acceptor_variant","Vradi05g03820","-","-","-","-","-"]
[5,5514031,"SNP","C","T","stop_gained","Vradi05g03930","Resistant specific protein-3","-","-","-","-"]
[5,5635275,"SNP","T","C","splice_donor_variant","Vradi05g03990","-","-","-","-","-"]
[5,5730587,"INDEL","C","CATGGAAAGATGAGAGCGTGTTTGAGTTTGGTGTTG","frameshift_variant","Vradi05g04040","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[5,5881180,"INDEL","CG","C","frameshift_variant","Vradi05g04090","Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)","carbon utilization [GO:0015976]","-","carbonate dehydratase activity [GO:0004089]; zinc ion binding [GO:0008270]","carbonate dehydratase activity [GO:0004089]; zinc ion binding [GO:0008270]; carbon utilization [GO:0015976]"]
[5,6024037,"INDEL","AG","A","frameshift_variant","Vradi05g04130","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","DNA repair [GO:0006281]","nucleus [GO:0005634]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","nucleus [GO:0005634]; ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; DNA repair [GO:0006281]"]
[5,6060469,"INDEL","G","GGAGAA","frameshift_variant","Vradi05g04150","Pantothenate kinase 2 (EC 2.7.1.33)","coenzyme A biosynthetic process [GO:0015937]","-","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]; coenzyme A biosynthetic process [GO:0015937]"]
[5,6060535,"INDEL","GAAGAAGAGTGTGGAAGCAAAGGAAAGGAA","G","frameshift_variant","Vradi05g04150","Pantothenate kinase 2 (EC 2.7.1.33)","coenzyme A biosynthetic process [GO:0015937]","-","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]; coenzyme A biosynthetic process [GO:0015937]"]
[5,6074724,"SNP","G","C","stop_gained","Vradi05g04150","Pantothenate kinase 2 (EC 2.7.1.33)","coenzyme A biosynthetic process [GO:0015937]","-","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]; coenzyme A biosynthetic process [GO:0015937]"]
[5,6074860,"SNP","C","T","splice_acceptor_variant","Vradi05g04150","Pantothenate kinase 2 (EC 2.7.1.33)","coenzyme A biosynthetic process [GO:0015937]","-","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pantothenate kinase activity [GO:0004594]; coenzyme A biosynthetic process [GO:0015937]"]
[5,6206413,"INDEL","TGATTGATTCCTGAG","T","frameshift_variant","Vradi05g04210","-","-","-","-","-"]
[5,6206893,"SNP","C","G","splice_acceptor_variant","Vradi05g04210","-","-","-","-","-"]
[5,6208511,"SNP","G","A","splice_donor_variant","Vradi05g04210","-","-","-","-","-"]
[5,6259306,"SNP","C","A","splice_donor_variant","Vradi05g04220","-","-","-","-","-"]
[5,6322604,"SNP","*","G","frameshift_variant","Vradi05g04230","-","-","-","-","-"]
[5,6396546,"INDEL","C","CTAAT","splice_acceptor_variant","Vradi05g04250","serine carboxypeptidase-like 1","-","-","serine-type carboxypeptidase activity [GO:0004185]","serine-type carboxypeptidase activity [GO:0004185]"]
[5,6401763,"INDEL","TCC","T","frameshift_variant","Vradi05g04250","serine carboxypeptidase-like 1","-","-","serine-type carboxypeptidase activity [GO:0004185]","serine-type carboxypeptidase activity [GO:0004185]"]
[5,6416781,"SNP","C","A","splice_acceptor_variant","Vradi05g04260","-","-","-","-","-"]
[5,6499609,"INDEL","GA","G","frameshift_variant","Vradi05g04280","triose phosphate/phosphate translocator, non-green plastid, chloroplastic","-","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[5,6632235,"INDEL","G","GTT","frameshift_variant","Vradi05g04350","homeobox protein knotted-1-like 6","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]"]
[5,6890732,"INDEL","CCAAGTAAAAGCTCT","C","frameshift_variant&start_lost","Vradi05g04450","cell division cycle protein 48 homolog","cell division [GO:0051301]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]; cell division [GO:0051301]"]
[5,7064950,"INDEL","GCTTGGCCTACCTTCACGAGGAATCACGTGTGAGAATCATTTATAGAGACATAAGATTGAGCAACATTCTACTTGAGGAGGACTTCACACCAAAGATCCCGTCAGATCTGTGCTGGT","G","frameshift_variant&stop_lost","Vradi05g04540","-","-","-","-","-"]
[5,7082543,"INDEL","TGACC","T","frameshift_variant&splice_donor_variant","Vradi05g04550","putative pentatricopeptide repeat-containing protein At1g64310","-","-","-","-"]
[5,7455502,"INDEL","G","GACCAATCGAGTGAACCCCATTGAATA","frameshift_variant","Vradi05g04690","Elongation factor Tu","-","chloroplast [GO:0009507]","GTPase activity [GO:0003924]; GTP binding [GO:0005525]; translation elongation factor activity [GO:0003746]","chloroplast [GO:0009507]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]"]
[5,7720818,"INDEL","A","ATC","frameshift_variant","Vradi05g04810","-","-","-","-","-"]
[5,7720927,"INDEL","T","TA","frameshift_variant","Vradi05g04810","-","-","-","-","-"]
[5,7728164,"INDEL","CG","C","frameshift_variant","Vradi05g04820","coiled-coil domain-containing protein SCD2 isoform X1","cytokinesis by cell plate formation [GO:0000911]","-","-","cytokinesis by cell plate formation [GO:0000911]"]
[5,7728196,"SNP","C","T","stop_gained","Vradi05g04820","coiled-coil domain-containing protein SCD2 isoform X1","cytokinesis by cell plate formation [GO:0000911]","-","-","cytokinesis by cell plate formation [GO:0000911]"]
[5,7757574,"SNP","C","T","splice_donor_variant","Vradi05g04840","uncharacterized protein LOC111242333","-","-","cysteine-type peptidase activity [GO:0008234]","cysteine-type peptidase activity [GO:0008234]"]
[5,8008273,"SNP","C","T","stop_gained","Vradi05g04870","-","-","-","-","-"]
[5,8549826,"SNP","C","T","stop_gained","Vradi05g04940","-","-","-","-","-"]
[5,8683567,"INDEL","GT","G","frameshift_variant","Vradi05g04950","-","-","-","-","-"]
[5,8965266,"SNP","G","A","stop_gained","Vradi05g05060","bZIP transcription factor 18","-","-","DNA-binding transcription factor activity [GO:0003700]","DNA-binding transcription factor activity [GO:0003700]"]
[5,8987701,"SNP","G","T","splice_acceptor_variant","Vradi05g05070","RING-H2 finger protein ATL74 isoform X1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,9322928,"SNP","A","G","start_lost","Vradi05g05140","-","-","-","-","-"]
[5,9540945,"INDEL","A","ATG","frameshift_variant","Vradi05g05230","methylesterase 17","-","-","-","-"]
[5,9786160,"SNP","C","G","splice_donor_variant","Vradi05g05290","-","-","-","-","-"]
[5,9811594,"SNP","G","A","stop_gained","Vradi05g05320","-","-","-","-","-"]
[5,10497935,"SNP","T","C","splice_acceptor_variant","Vradi05g05550","TITAN-like protein isoform X2","-","-","-","-"]
[5,10499420,"INDEL","CTGGAAAT","C","frameshift_variant","Vradi05g05550","TITAN-like protein isoform X2","-","-","-","-"]
[5,10499428,"INDEL","CTA","C","splice_acceptor_variant","Vradi05g05550","TITAN-like protein isoform X2","-","-","-","-"]
[5,10531078,"SNP","G","A","splice_acceptor_variant","Vradi05g05580","uncharacterized protein LOC111241781","-","-","-","-"]
[5,11023978,"INDEL","TG","T","frameshift_variant","Vradi05g05770","1,3-beta-glucan synthase (EC 2.4.1.34)","(1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]","1,3-beta-D-glucan synthase activity [GO:0003843]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]; 1,3-beta-D-glucan synthase activity [GO:0003843]; (1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]"]
[5,11702714,"SNP","C","T","splice_acceptor_variant","Vradi05g06020","protein POLLEN DEFECTIVE IN GUIDANCE 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,11703624,"SNP","C","T","stop_gained","Vradi05g06020","protein POLLEN DEFECTIVE IN GUIDANCE 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,11703894,"INDEL","AT","A","frameshift_variant","Vradi05g06020","protein POLLEN DEFECTIVE IN GUIDANCE 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,11772828,"SNP","C","T","stop_gained","Vradi05g06040","chromophore lyase CRL, chloroplastic","protein-phycocyanobilin linkage [GO:0017009]","-","lyase activity [GO:0016829]","lyase activity [GO:0016829]; protein-phycocyanobilin linkage [GO:0017009]"]
[5,12053025,"INDEL","GGAATAGT","G","frameshift_variant","Vradi05g06060","-","-","-","-","-"]
[5,12097797,"INDEL","C","CA","frameshift_variant","Vradi05g06070","uncharacterized protein LOC111241952","-","-","-","-"]
[5,12100657,"SNP","A","C","stop_gained","Vradi05g06070","uncharacterized protein LOC111241952","-","-","-","-"]
[5,12714948,"INDEL","C","CT","frameshift_variant","Vradi05g06230","-","-","-","-","-"]
[5,12916480,"INDEL","GTT","G","splice_donor_variant","Vradi05g06380","-","-","-","-","-"]
[5,13706623,"SNP","C","T","splice_acceptor_variant","Vradi05g06800","pentatricopeptide repeat-containing protein At1g06710, mitochondrial","-","-","-","-"]
[5,14173005,"INDEL","GCGAGC","G","frameshift_variant&splice_acceptor_variant","Vradi05g07080","Sm protein F","spliceosomal snRNP assembly [GO:0000387]","spliceosomal complex [GO:0005681]","RNA binding [GO:0003723]","spliceosomal complex [GO:0005681]; RNA binding [GO:0003723]; spliceosomal snRNP assembly [GO:0000387]"]
[5,14398639,"SNP","A","T","start_lost","Vradi05g07210","5'-adenylylsulfate reductase-like 4 isoform X1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,14440106,"SNP","G","A","splice_donor_variant","Vradi05g07250","-","-","-","-","-"]
[5,14440133,"INDEL","T","TAC","frameshift_variant","Vradi05g07250","-","-","-","-","-"]
[5,14659624,"INDEL","AGGGCTCAAGACTAGGATTAC","A","frameshift_variant","Vradi05g07380","isoamylase 3, chloroplastic isoform X1","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[5,14907934,"INDEL","AC","A","frameshift_variant","Vradi05g07520","protein CLT2, chloroplastic","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,14946440,"INDEL","TATCC","T","frameshift_variant","Vradi05g07540","protein SABRE isoform X5","-","-","-","-"]
[5,15273044,"INDEL","AG","A","frameshift_variant","Vradi05g07690","Acetyl-CoA carboxylase (EC 6.4.1.2)","fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]","-","acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]","acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]"]
[5,15273061,"INDEL","TG","T","frameshift_variant","Vradi05g07690","Acetyl-CoA carboxylase (EC 6.4.1.2)","fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]","-","acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]","acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]"]
[5,15332193,"INDEL","TTAAC","T","frameshift_variant&stop_lost","Vradi05g07740","-","-","-","-","-"]
[5,15454417,"SNP","G","A","splice_acceptor_variant","Vradi05g07760","-","-","-","-","-"]
[5,15493796,"INDEL","C","CT","frameshift_variant","Vradi05g07780","geranylgeranyl transferase type-2 subunit alpha 1","protein prenylation [GO:0018342]","-","protein prenyltransferase activity [GO:0008318]","protein prenyltransferase activity [GO:0008318]; protein prenylation [GO:0018342]"]
[5,15493801,"INDEL","T","TGA","frameshift_variant","Vradi05g07780","geranylgeranyl transferase type-2 subunit alpha 1","protein prenylation [GO:0018342]","-","protein prenyltransferase activity [GO:0008318]","protein prenyltransferase activity [GO:0008318]; protein prenylation [GO:0018342]"]
[5,15493802,"INDEL","T","TAAAG","frameshift_variant","Vradi05g07780","geranylgeranyl transferase type-2 subunit alpha 1","protein prenylation [GO:0018342]","-","protein prenyltransferase activity [GO:0008318]","protein prenyltransferase activity [GO:0008318]; protein prenylation [GO:0018342]"]
[5,15497019,"SNP","T","G","stop_gained","Vradi05g07790","-","-","-","-","-"]
[5,15499950,"SNP","G","A","splice_acceptor_variant","Vradi05g07800","-","-","-","-","-"]
[5,15660077,"INDEL","CAA","C","frameshift_variant","Vradi05g07950","-","-","-","-","-"]
[5,15855901,"INDEL","G","GA","frameshift_variant","Vradi05g08110","uncharacterized protein LOC106761645","-","-","-","-"]
[5,16089707,"INDEL","ATCTC","A","frameshift_variant&start_lost","Vradi05g08310","Ubiquitin-fold modifier-conjugating enzyme 1","protein ufmylation [GO:0071569]","-","UFM1 conjugating enzyme activity [GO:0061657]","UFM1 conjugating enzyme activity [GO:0061657]; protein ufmylation [GO:0071569]"]
[5,16377723,"INDEL","TC","T","frameshift_variant","Vradi05g08500","uncharacterized protein LOC106761987","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,16377836,"INDEL","AG","A","splice_acceptor_variant","Vradi05g08500","uncharacterized protein LOC106761987","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,16386657,"SNP","C","G","stop_gained","Vradi05g08500","uncharacterized protein LOC106761987","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,16992546,"INDEL","C","CGATG","frameshift_variant","Vradi05g09030","cyclin-D-binding Myb-like transcription factor 1 isoform X2","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[5,17071395,"INDEL","TC","T","frameshift_variant","Vradi05g09110","GTP-binding protein At2g22870","-","-","GTP binding [GO:0005525]; metal ion binding [GO:0046872]","GTP binding [GO:0005525]; metal ion binding [GO:0046872]"]
[5,17315363,"INDEL","ATGAAGAGGTCAAGGTAGGTGTCAAAGTCCATGATC","A","frameshift_variant&splice_donor_variant","Vradi05g09180","nitrate regulatory gene2 protein","-","-","-","-"]
[5,17378700,"SNP","C","A","stop_gained","Vradi05g09260","uncharacterized protein LOC106762138","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,17421315,"SNP","C","T","splice_acceptor_variant","Vradi05g09310","uncharacterized protein LOC106761632 isoform X2","-","-","-","-"]
[5,17421535,"INDEL","A","AAG","frameshift_variant","Vradi05g09310","uncharacterized protein LOC106761632 isoform X2","-","-","-","-"]
[5,17523485,"INDEL","CACGTGGAACGTGCTTCGGATGATCCGACGATGTTGATTGTG","C","frameshift_variant","Vradi05g09450","probable WRKY transcription factor 17 isoform X2","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[5,17579049,"INDEL","CTTCT","C","frameshift_variant","Vradi05g09510","uncharacterized protein LOC106759687","-","SAGA-type complex [GO:0070461]","-","SAGA-type complex [GO:0070461]"]
[5,17683544,"SNP","G","T","splice_acceptor_variant","Vradi05g09590","Cryptochrome DASH","DNA repair [GO:0006281]; protein-chromophore linkage [GO:0018298]","-","DNA photolyase activity [GO:0003913]","DNA photolyase activity [GO:0003913]; DNA repair [GO:0006281]; protein-chromophore linkage [GO:0018298]"]
[5,17758090,"INDEL","G","GAA","frameshift_variant","Vradi05g09650","DDT domain-containing protein DDR4 isoform X1","-","-","-","-"]
[5,18158440,"SNP","T","G","stop_lost","Vradi05g09870","-","-","-","-","-"]
[5,18396012,"SNP","C","A","stop_gained","Vradi05g10050","DEAD-box ATP-dependent RNA helicase 56-like","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[5,18396060,"INDEL","AGC","A","frameshift_variant","Vradi05g10050","DEAD-box ATP-dependent RNA helicase 56-like","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[5,18922303,"INDEL","TTCCC","T","frameshift_variant","Vradi05g10520","protein CHROMATIN REMODELING 5-like isoform X4","-","-","ATP binding [GO:0005524]; nucleosome-dependent ATPase activity [GO:0070615]","ATP binding [GO:0005524]; nucleosome-dependent ATPase activity [GO:0070615]"]
[5,19366195,"INDEL","GCATTTCAGACCAGAAATGGATCAAATTCAGCAAACTCAGAAGCAGTAGTA","G","frameshift_variant&splice_donor_variant","Vradi05g10650","casein kinase 1-like protein HD16","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,19366243,"INDEL","GTA","G","frameshift_variant","Vradi05g10650","casein kinase 1-like protein HD16","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,19366252,"SNP","C","T","splice_donor_variant","Vradi05g10650","casein kinase 1-like protein HD16","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,19409691,"SNP","C","A","stop_gained","Vradi05g10660","amino acid permease 8 isoform X6","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]","integral component of membrane [GO:0016021]; symporter activity [GO:0015293]; amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]"]
[5,19410174,"INDEL","CAA","C","frameshift_variant","Vradi05g10660","amino acid permease 8 isoform X6","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]","integral component of membrane [GO:0016021]; symporter activity [GO:0015293]; amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]"]
[5,19614394,"SNP","G","A","splice_donor_variant","Vradi05g10790","phosphopantothenate--cysteine ligase 2","-","-","ligase activity [GO:0016874]","ligase activity [GO:0016874]"]
[5,19614872,"SNP","G","A","splice_donor_variant","Vradi05g10790","phosphopantothenate--cysteine ligase 2","-","-","ligase activity [GO:0016874]","ligase activity [GO:0016874]"]
[5,19616330,"INDEL","A","AAT","frameshift_variant","Vradi05g10790","phosphopantothenate--cysteine ligase 2","-","-","ligase activity [GO:0016874]","ligase activity [GO:0016874]"]
[5,19616333,"INDEL","CGG","C","frameshift_variant","Vradi05g10790","phosphopantothenate--cysteine ligase 2","-","-","ligase activity [GO:0016874]","ligase activity [GO:0016874]"]
[5,19616378,"SNP","G","T","stop_gained","Vradi05g10790","phosphopantothenate--cysteine ligase 2","-","-","ligase activity [GO:0016874]","ligase activity [GO:0016874]"]
[5,19622099,"SNP","C","T","stop_gained","Vradi05g10800","uncharacterized protein LOC106762321","-","-","-","-"]
[5,19651811,"INDEL","G","GA","frameshift_variant","Vradi05g10810","uncharacterized protein LOC106762519","intracellular signal transduction [GO:0035556]","-","protein disulfide oxidoreductase activity [GO:0015035]","protein disulfide oxidoreductase activity [GO:0015035]; intracellular signal transduction [GO:0035556]"]
[5,19715938,"INDEL","C","CG","frameshift_variant","Vradi05g10850","-","-","-","-","-"]
[5,19756060,"SNP","G","T","stop_gained","Vradi05g10880","U-box domain-containing protein 4","-","-","-","-"]
[5,19756084,"SNP","C","T","stop_gained","Vradi05g10880","U-box domain-containing protein 4","-","-","-","-"]
[5,19756299,"SNP","G","A","splice_donor_variant","Vradi05g10880","U-box domain-containing protein 4","-","-","-","-"]
[5,19778509,"SNP","C","T","stop_gained","Vradi05g10900","uncharacterized protein LOC106762282 isoform X3","cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]"]
[5,19779376,"SNP","T","G","stop_gained","Vradi05g10900","uncharacterized protein LOC106762282 isoform X3","cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]"]
[5,19779533,"INDEL","A","AG","splice_acceptor_variant","Vradi05g10900","uncharacterized protein LOC106762282 isoform X3","cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]"]
[5,19779651,"SNP","T","G","stop_gained","Vradi05g10900","uncharacterized protein LOC106762282 isoform X3","cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]"]
[5,19779863,"INDEL","G","GAA","frameshift_variant","Vradi05g10900","uncharacterized protein LOC106762282 isoform X3","cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]"]
[5,19779948,"SNP","A","T","splice_acceptor_variant","Vradi05g10900","uncharacterized protein LOC106762282 isoform X3","cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]"]
[5,19895771,"INDEL","T","TC","frameshift_variant","Vradi05g10960","probable WRKY transcription factor 40 isoform X2","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[5,19895773,"INDEL","T","TGTTCAAG","frameshift_variant","Vradi05g10960","probable WRKY transcription factor 40 isoform X2","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[5,19914658,"INDEL","G","GC","frameshift_variant","Vradi05g10980","-","-","-","-","-"]
[5,20360775,"SNP","C","T","splice_acceptor_variant","Vradi05g11450","F-box/LRR-repeat protein 15","-","-","-","-"]
[5,20360907,"INDEL","AGC","A","frameshift_variant","Vradi05g11450","F-box/LRR-repeat protein 15","-","-","-","-"]
[5,20388538,"INDEL","G","GA","frameshift_variant","Vradi05g11480","serine/arginine-rich splicing factor RS41-like isoform X2","nucleoside metabolic process [GO:0009116]","integral component of membrane [GO:0016021]","RNA binding [GO:0003723]","integral component of membrane [GO:0016021]; RNA binding [GO:0003723]; nucleoside metabolic process [GO:0009116]"]
[5,20398877,"SNP","T","C","splice_donor_variant","Vradi05g11500","uncharacterized protein LOC106761742","-","-","-","-"]
[5,20855429,"SNP","G","C","splice_acceptor_variant","Vradi05g11920","-","-","-","-","-"]
[5,21179501,"SNP","C","A","stop_gained","Vradi05g12220","DNA excision repair protein ERCC-8","transcription-coupled nucleotide-excision repair [GO:0006283]","-","-","transcription-coupled nucleotide-excision repair [GO:0006283]"]
[5,21179635,"SNP","G","A","stop_gained","Vradi05g12220","DNA excision repair protein ERCC-8","transcription-coupled nucleotide-excision repair [GO:0006283]","-","-","transcription-coupled nucleotide-excision repair [GO:0006283]"]
[5,21861971,"SNP","C","T","stop_gained","Vradi05g12800","uncharacterized protein LOC106762372 isoform X2","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[5,21862224,"SNP","T","A","splice_acceptor_variant","Vradi05g12800","uncharacterized protein LOC106762372 isoform X2","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[5,22026387,"SNP","C","T","splice_acceptor_variant","Vradi05g12970","pollen-specific leucine-rich repeat extensin-like protein 1","-","-","-","-"]
[5,22314581,"INDEL","G","GA","frameshift_variant","Vradi05g13180","uncharacterized protein LOC106764672","-","-","-","-"]
[5,22314590,"INDEL","T","TG","frameshift_variant","Vradi05g13180","uncharacterized protein LOC106764672","-","-","-","-"]
[5,22314593,"INDEL","TCTC","TTC","frameshift_variant","Vradi05g13180","uncharacterized protein LOC106764672","-","-","-","-"]
[5,22314781,"INDEL","TAGAA","T","frameshift_variant","Vradi05g13180","uncharacterized protein LOC106764672","-","-","-","-"]
[5,22314862,"SNP","C","A","stop_gained","Vradi05g13180","uncharacterized protein LOC106764672","-","-","-","-"]
[5,22314885,"INDEL","AC","A","frameshift_variant","Vradi05g13180","uncharacterized protein LOC106764672","-","-","-","-"]
[5,22314917,"INDEL","T","TA","frameshift_variant","Vradi05g13180","uncharacterized protein LOC106764672","-","-","-","-"]
[5,22381685,"INDEL","C","CT","frameshift_variant","Vradi05g13260","uncharacterized protein LOC106760475","lipid biosynthetic process [GO:0008610]","-","-","lipid biosynthetic process [GO:0008610]"]
[5,22381976,"INDEL","G","GGT","frameshift_variant","Vradi05g13260","uncharacterized protein LOC106760475","lipid biosynthetic process [GO:0008610]","-","-","lipid biosynthetic process [GO:0008610]"]
[5,22382244,"INDEL","G","GGT","frameshift_variant","Vradi05g13260","uncharacterized protein LOC106760475","lipid biosynthetic process [GO:0008610]","-","-","lipid biosynthetic process [GO:0008610]"]
[5,22382304,"SNP","G","A","stop_gained","Vradi05g13260","uncharacterized protein LOC106760475","lipid biosynthetic process [GO:0008610]","-","-","lipid biosynthetic process [GO:0008610]"]
[5,22382411,"SNP","T","A","stop_gained","Vradi05g13260","uncharacterized protein LOC106760475","lipid biosynthetic process [GO:0008610]","-","-","lipid biosynthetic process [GO:0008610]"]
[5,22572759,"SNP","C","T","splice_donor_variant","Vradi05g13520","-","-","-","-","-"]
[5,22745817,"INDEL","ACTTCGCCGTGGCCACTTGCGCATTTT","A","frameshift_variant","Vradi05g13680","probable 1-acylglycerol-3-phosphate O-acyltransferase","-","-","transferase activity, transferring acyl groups [GO:0016746]","transferase activity, transferring acyl groups [GO:0016746]"]
[5,23081480,"SNP","G","A","stop_gained","Vradi05g14020","CO(2)-response secreted protease","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[5,23236038,"SNP","C","T","splice_acceptor_variant","Vradi05g14200","serine/threonine-protein kinase STY46","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,23261801,"INDEL","AGG","A","frameshift_variant&splice_acceptor_variant","Vradi05g14220","Prolyl oligopeptidase (EC 3.4.21.26)","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[5,23316217,"SNP","C","A","stop_gained","Vradi05g14300","nitrate regulatory gene2 protein","-","-","-","-"]
[5,23473225,"INDEL","CCGTCG","C","frameshift_variant","Vradi05g14470","Glycosyltransferase family 92 protein (EC 2.4.1.-)","-","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]"]
[5,23769954,"INDEL","AGGAATGCTTG","A","frameshift_variant","Vradi05g14790","Coatomer subunit gamma","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]","structural molecule activity [GO:0005198]","COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]; structural molecule activity [GO:0005198]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[5,23770032,"SNP","G","T","stop_gained","Vradi05g14790","Coatomer subunit gamma","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]","structural molecule activity [GO:0005198]","COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]; structural molecule activity [GO:0005198]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[5,23780767,"INDEL","C","CACCACCATTATAACTAGAA","frameshift_variant","Vradi05g14810","probable receptor-like serine/threonine-protein kinase At4g34500","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[5,24118948,"INDEL","AC","A","splice_donor_variant","Vradi05g15210","Arginine decarboxylase (EC 4.1.1.19)","arginine catabolic process [GO:0006527]; spermidine biosynthetic process [GO:0008295]","-","arginine decarboxylase activity [GO:0008792]","arginine decarboxylase activity [GO:0008792]; arginine catabolic process [GO:0006527]; spermidine biosynthetic process [GO:0008295]"]
[5,24119133,"SNP","T","C","splice_donor_variant","Vradi05g15210","Arginine decarboxylase (EC 4.1.1.19)","arginine catabolic process [GO:0006527]; spermidine biosynthetic process [GO:0008295]","-","arginine decarboxylase activity [GO:0008792]","arginine decarboxylase activity [GO:0008792]; arginine catabolic process [GO:0006527]; spermidine biosynthetic process [GO:0008295]"]
[5,24521191,"INDEL","TCATAA","T","frameshift_variant","Vradi05g15740","UTP--glucose-1-phosphate uridylyltransferase","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]; uridylyltransferase activity [GO:0070569]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; uridylyltransferase activity [GO:0070569]; translation [GO:0006412]"]
[5,24521197,"INDEL","A","AGTTCT","frameshift_variant","Vradi05g15740","UTP--glucose-1-phosphate uridylyltransferase","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]; uridylyltransferase activity [GO:0070569]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; uridylyltransferase activity [GO:0070569]; translation [GO:0006412]"]
[5,24522194,"INDEL","A","AC","frameshift_variant","Vradi05g15740","UTP--glucose-1-phosphate uridylyltransferase","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]; uridylyltransferase activity [GO:0070569]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; uridylyltransferase activity [GO:0070569]; translation [GO:0006412]"]
[5,24561497,"SNP","G","T","splice_donor_variant","Vradi05g15790","uncharacterized protein LOC106759733 isoform X3","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[5,24570506,"SNP","T","C","splice_donor_variant","Vradi05g15810","Probable alanine--tRNA ligase, chloroplastic (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)","alanyl-tRNA aminoacylation [GO:0006419]","chloroplast [GO:0009507]; mitochondrion [GO:0005739]","alanine-tRNA ligase activity [GO:0004813]; ATP binding [GO:0005524]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]","chloroplast [GO:0009507]; mitochondrion [GO:0005739]; alanine-tRNA ligase activity [GO:0004813]; ATP binding [GO:0005524]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]; alanyl-tRNA aminoacylation [GO:0006419]"]
[5,24584866,"SNP","G","A","stop_gained","Vradi05g15820","protein MAIN-LIKE 1-like","-","-","-","-"]
[5,24585125,"SNP","C","T","stop_gained","Vradi05g15820","protein MAIN-LIKE 1-like","-","-","-","-"]
[5,24585178,"INDEL","CT","C","frameshift_variant","Vradi05g15820","protein MAIN-LIKE 1-like","-","-","-","-"]
[5,24631693,"SNP","C","G","splice_acceptor_variant","Vradi05g15880","-","-","-","-","-"]
[5,24684830,"SNP","C","G","start_lost","Vradi05g15900","Hexosyltransferase (EC 2.4.1.-)","cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]","endosome [GO:0005768]; Golgi membrane [GO:0000139]; trans-Golgi network [GO:0005802]; vacuolar membrane [GO:0005774]","polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]","endosome [GO:0005768]; Golgi membrane [GO:0000139]; trans-Golgi network [GO:0005802]; vacuolar membrane [GO:0005774]; polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]; cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]"]
[5,24695940,"INDEL","T","TGGCATCATGAC","frameshift_variant&stop_gained","Vradi05g15910","alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1","protein glycosylation [GO:0006486]","integral component of membrane [GO:0016021]","acetylglucosaminyltransferase activity [GO:0008375]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; acetylglucosaminyltransferase activity [GO:0008375]; metal ion binding [GO:0046872]; protein glycosylation [GO:0006486]"]
[5,24710104,"INDEL","TAGA","T","splice_acceptor_variant","Vradi05g15920","-","-","-","-","-"]
[5,24884585,"INDEL","ACACCATTGATGCCAATGCTAAC","A","frameshift_variant","Vradi05g16000","uncharacterized protein LOC106762007 isoform X3","-","-","helicase activity [GO:0004386]","helicase activity [GO:0004386]"]
[5,24920733,"SNP","C","T","splice_acceptor_variant","Vradi05g16040","mediator of RNA polymerase II transcription subunit 8","-","mediator complex [GO:0016592]","-","mediator complex [GO:0016592]"]
[5,24968321,"INDEL","AG","A","frameshift_variant","Vradi05g16110","ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[5,24969963,"SNP","C","T","stop_gained","Vradi05g16110","ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[5,24970846,"SNP","G","A","splice_acceptor_variant","Vradi05g16110","ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[5,25064889,"SNP","G","A","stop_gained","Vradi05g16200","cinnamoyl-CoA reductase 1","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[5,25267307,"INDEL","TGA","T","frameshift_variant","Vradi05g16410","vacuolar protein-sorting-associated protein 33 homolog","-","-","-","-"]
[5,25466476,"INDEL","C","CAAATTCTTTTTTCAGCTGCAAAAAAATAATATTG","frameshift_variant","Vradi05g16670","PX domain-containing protein EREX","-","-","phosphatidylinositol binding [GO:0035091]","phosphatidylinositol binding [GO:0035091]"]
[5,25513793,"INDEL","A","AG","frameshift_variant","Vradi05g16730","aquaporin NIP6-1 isoform X1","-","integral component of membrane [GO:0016021]","channel activity [GO:0015267]","integral component of membrane [GO:0016021]; channel activity [GO:0015267]"]
[5,25689958,"INDEL","CTA","C","splice_acceptor_variant","Vradi05g16810","THO complex subunit 1 isoform X1","-","-","-","-"]
[5,25830480,"SNP","T","A","stop_gained","Vradi05g16920","ATP synthase subunit O, mitochondrial","-","membrane [GO:0016020]","proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","membrane [GO:0016020]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]"]
[5,25830506,"INDEL","TCAAAG","T","frameshift_variant","Vradi05g16920","ATP synthase subunit O, mitochondrial","-","membrane [GO:0016020]","proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","membrane [GO:0016020]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]"]
[5,25830612,"INDEL","T","TAA","frameshift_variant","Vradi05g16920","ATP synthase subunit O, mitochondrial","-","membrane [GO:0016020]","proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","membrane [GO:0016020]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]"]
[5,25912482,"INDEL","GGTAC","G","splice_donor_variant","Vradi05g16950","Protein DETOXIFICATION (Multidrug and toxic compound extrusion protein)","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[5,25975884,"INDEL","AT","A","frameshift_variant&start_lost","Vradi05g16990","xylulose 5-phosphate/phosphate translocator, chloroplastic","-","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[5,26030447,"INDEL","CACTCTTGT","C","frameshift_variant","Vradi05g17040","RNA polymerase sigma factor sigD, chloroplastic isoform X2","DNA-templated transcription, initiation [GO:0006352]","-","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]; sigma factor activity [GO:0016987]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]; sigma factor activity [GO:0016987]; DNA-templated transcription, initiation [GO:0006352]"]
[5,26030487,"SNP","A","T","stop_gained","Vradi05g17040","RNA polymerase sigma factor sigD, chloroplastic isoform X2","DNA-templated transcription, initiation [GO:0006352]","-","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]; sigma factor activity [GO:0016987]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]; sigma factor activity [GO:0016987]; DNA-templated transcription, initiation [GO:0006352]"]
[5,26054745,"SNP","C","T","stop_gained","Vradi05g17050","uncharacterized protein LOC106762046","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,26115277,"INDEL","CA","C","frameshift_variant","Vradi05g17100","Methyltransferase (EC 2.1.1.-)","methylation [GO:0032259]; sterol biosynthetic process [GO:0016126]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]; sterol biosynthetic process [GO:0016126]"]
[5,26136106,"INDEL","T","TA","frameshift_variant","Vradi05g17110","uncharacterized protein LOC106762656","-","-","-","-"]
[5,26136109,"INDEL","AG","A","frameshift_variant","Vradi05g17110","uncharacterized protein LOC106762656","-","-","-","-"]
[5,26137450,"SNP","A","T","splice_donor_variant","Vradi05g17110","uncharacterized protein LOC106762656","-","-","-","-"]
[5,26146294,"INDEL","A","AGTAT","splice_donor_variant","Vradi05g17120","uncharacterized protein LOC106773358","-","-","-","-"]
[5,26169856,"SNP","G","A","stop_gained","Vradi05g17160","-","-","-","-","-"]
[5,26276488,"INDEL","G","GAAAA","frameshift_variant","Vradi05g17200","nudix hydrolase 16, mitochondrial-like isoform X2","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
[5,26328247,"INDEL","TTCAGTAGGAAGCCGAA","T","frameshift_variant&stop_lost","Vradi05g17230","U-box domain-containing protein 1","-","-","-","-"]
[5,26330801,"SNP","A","G","start_lost","Vradi05g17230","U-box domain-containing protein 1","-","-","-","-"]
[5,26432874,"INDEL","G","GC","frameshift_variant","Vradi05g17290","two-component response regulator ORR10","phosphorelay signal transduction system [GO:0000160]","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]; phosphorelay signal transduction system [GO:0000160]"]
[5,26432912,"INDEL","G","GC","frameshift_variant","Vradi05g17290","two-component response regulator ORR10","phosphorelay signal transduction system [GO:0000160]","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]; phosphorelay signal transduction system [GO:0000160]"]
[5,26464531,"INDEL","G","GAC","frameshift_variant","Vradi05g17310","putative disease resistance protein RGA3","defense response [GO:0006952]","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]; defense response [GO:0006952]"]
[5,26581507,"SNP","C","T","splice_donor_variant","Vradi05g17410","DNA-directed RNA polymerase V subunit 5C isoform X1","transcription, DNA-templated [GO:0006351]","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]; transcription, DNA-templated [GO:0006351]"]
[5,26646477,"INDEL","C","CG","frameshift_variant","Vradi05g17450","annexin-like protein RJ4 isoform X2","-","-","calcium-dependent phospholipid binding [GO:0005544]; calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]"]
[5,26646479,"INDEL","A","AAT","frameshift_variant","Vradi05g17450","annexin-like protein RJ4 isoform X2","-","-","calcium-dependent phospholipid binding [GO:0005544]; calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]"]
[5,26650427,"SNP","A","G","splice_acceptor_variant","Vradi05g17450","annexin-like protein RJ4 isoform X2","-","-","calcium-dependent phospholipid binding [GO:0005544]; calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]"]
[5,26756873,"SNP","C","T","splice_acceptor_variant","Vradi05g17530","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; recognition of pollen [GO:0048544]"]
[5,26758318,"SNP","C","T","stop_gained","Vradi05g17530","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; recognition of pollen [GO:0048544]"]
[5,26939302,"INDEL","AGGGC","A","frameshift_variant","Vradi05g17660","protein EARLY RESPONSIVE TO DEHYDRATION 15 isoform X3","-","-","-","-"]
[5,26939307,"INDEL","TCCTAAGTCCCCTTCAG","T","frameshift_variant","Vradi05g17660","protein EARLY RESPONSIVE TO DEHYDRATION 15 isoform X3","-","-","-","-"]
[5,27172654,"SNP","G","T","splice_donor_variant","Vradi05g17780","F-box/WD-40 repeat-containing protein At3g52030","-","-","-","-"]
[5,27392461,"SNP","C","A","stop_gained","Vradi05g17930","clustered mitochondria protein","-","-","-","-"]
[5,27393301,"INDEL","GA","G","frameshift_variant","Vradi05g17930","clustered mitochondria protein","-","-","-","-"]
[5,27472763,"SNP","A","G","splice_donor_variant","Vradi05g18010","thioredoxin-like protein Clot","-","-","-","-"]
[5,27472885,"INDEL","CT","C","frameshift_variant","Vradi05g18010","thioredoxin-like protein Clot","-","-","-","-"]
[5,27511767,"INDEL","G","GCA","frameshift_variant","Vradi05g18040","uncharacterized protein LOC106762613 isoform X1","methylation [GO:0032259]; siroheme biosynthetic process [GO:0019354]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]; siroheme biosynthetic process [GO:0019354]"]
[5,27830343,"SNP","G","C","stop_gained","Vradi05g18210","-","-","-","-","-"]
[5,27894178,"SNP","A","G","splice_donor_variant","Vradi05g18250","citrate synthase, mitochondrial-like","-","-","transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer [GO:0046912]","transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer [GO:0046912]"]
[5,28072624,"INDEL","CA","C","frameshift_variant&stop_lost","Vradi05g18360","uncharacterized protein LOC106760568 isoform X1","-","-","-","-"]
[5,29577183,"INDEL","GGATGTGCTGCAGTCAA","G","frameshift_variant&splice_acceptor_variant","Vradi05g19120","1,3-beta-glucan synthase (EC 2.4.1.34)","(1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]","1,3-beta-D-glucan synthase activity [GO:0003843]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]; 1,3-beta-D-glucan synthase activity [GO:0003843]; (1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]"]
[5,29715551,"INDEL","GAACCACAATTCATGAGGATGAA","G","frameshift_variant","Vradi05g19200","ubiquitin carboxyl-terminal hydrolase 15","protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]","-","cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]"]
[5,30193706,"SNP","G","A","stop_gained","Vradi05g19430","uncharacterized protein LOC106761833","-","-","-","-"]
[5,31044132,"INDEL","A","AG","splice_donor_variant","Vradi05g19880","ABC transporter C family member 13","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,31044134,"INDEL","C","CTA","frameshift_variant","Vradi05g19880","ABC transporter C family member 13","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,31089760,"SNP","T","A","stop_gained","Vradi05g19930","lys-63-specific deubiquitinase BRCC36","DNA repair [GO:0006281]; protein K63-linked deubiquitination [GO:0070536]","BRCA1-A complex [GO:0070531]; BRISC complex [GO:0070552]","isopeptidase activity [GO:0070122]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","BRCA1-A complex [GO:0070531]; BRISC complex [GO:0070552]; isopeptidase activity [GO:0070122]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; DNA repair [GO:0006281]; protein K63-linked deubiquitination [GO:0070536]"]
[5,31089833,"INDEL","CTCTTCTTCTT","C","frameshift_variant","Vradi05g19930","lys-63-specific deubiquitinase BRCC36","DNA repair [GO:0006281]; protein K63-linked deubiquitination [GO:0070536]","BRCA1-A complex [GO:0070531]; BRISC complex [GO:0070552]","isopeptidase activity [GO:0070122]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","BRCA1-A complex [GO:0070531]; BRISC complex [GO:0070552]; isopeptidase activity [GO:0070122]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; DNA repair [GO:0006281]; protein K63-linked deubiquitination [GO:0070536]"]
[5,31149584,"SNP","T","A","splice_acceptor_variant","Vradi05g20000","uncharacterized protein LOC106762692 isoform X2","-","integral component of membrane [GO:0016021]","catalytic activity [GO:0003824]","integral component of membrane [GO:0016021]; catalytic activity [GO:0003824]"]
[5,31164894,"SNP","T","A","stop_gained","Vradi05g20010","ADP,ATP carrier protein","-","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]","ATP:ADP antiporter activity [GO:0005471]; ATP binding [GO:0005524]","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP:ADP antiporter activity [GO:0005471]"]
[5,31299521,"INDEL","TAACTCTATAATCCC","T","frameshift_variant&splice_donor_variant","Vradi05g20100","N-terminal acetyltransferase A complex auxiliary subunit NAA15","-","-","transferase activity [GO:0016740]","transferase activity [GO:0016740]"]
[5,31427738,"INDEL","AT","A","frameshift_variant","Vradi05g20240","LOW QUALITY PROTEIN: regulator of telomere elongation helicase 1","nucleobase-containing compound metabolic process [GO:0006139]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]","nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; nucleobase-containing compound metabolic process [GO:0006139]"]
[5,31428694,"INDEL","ATGGAAGAACGTCAC","A","frameshift_variant","Vradi05g20240","LOW QUALITY PROTEIN: regulator of telomere elongation helicase 1","nucleobase-containing compound metabolic process [GO:0006139]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]","nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; nucleobase-containing compound metabolic process [GO:0006139]"]
[5,31428710,"INDEL","TGCTAAATGTTATCGTGTAAGTATTTGACTTTATTGTATTCAAGTTACCCATCAC","T","splice_donor_variant","Vradi05g20240","LOW QUALITY PROTEIN: regulator of telomere elongation helicase 1","nucleobase-containing compound metabolic process [GO:0006139]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]","nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; nucleobase-containing compound metabolic process [GO:0006139]"]
[5,31521940,"INDEL","TGGGTTATG","T","frameshift_variant","tRNA-Met","-","-","-","-","-"]
[5,31702183,"INDEL","G","GGATT","frameshift_variant&stop_gained","Vradi05g20630","uncharacterized protein LOC106761442","-","-","-","-"]
[5,31726823,"INDEL","T","TAG","frameshift_variant","Vradi05g20660","-","-","-","-","-"]
[5,31985565,"INDEL","A","AAC","frameshift_variant","Vradi05g20810","-","-","-","-","-"]
[5,31985566,"INDEL","CTG","C","frameshift_variant","Vradi05g20810","-","-","-","-","-"]
[5,32139507,"SNP","A","T","stop_gained","Vradi05g20970","WD-40 repeat-containing protein MSI4-like","-","-","-","-"]
[5,32253395,"INDEL","AT","A","frameshift_variant","Vradi05g21110","Epidermal patterning factor-like protein","guard cell differentiation [GO:0010052]","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]; guard cell differentiation [GO:0010052]"]
[5,32387273,"INDEL","C","CT","frameshift_variant","Vradi05g21200","mitochondrial import inner membrane translocase subunit TIM23-2","-","-","-","-"]
[5,32552954,"SNP","G","A","splice_acceptor_variant","Vradi05g21300","RING-H2 finger protein ATL46","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,32907654,"SNP","C","A","stop_gained","Vradi05g21520","uncharacterized protein LOC106761263","-","-","-","-"]
[5,32908298,"INDEL","G","GA","frameshift_variant","Vradi05g21520","uncharacterized protein LOC106761263","-","-","-","-"]
[5,32908304,"INDEL","A","AT","frameshift_variant","Vradi05g21520","uncharacterized protein LOC106761263","-","-","-","-"]
[5,33069905,"INDEL","GTA","G","splice_donor_variant","Vradi05g21710","-","-","-","-","-"]
[5,33130585,"SNP","G","A","splice_acceptor_variant","Vradi05g21730","eugenol synthase 1-like","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[5,33133060,"SNP","C","T","stop_gained","Vradi05g21740","-","-","-","-","-"]
[5,33136934,"SNP","C","T","splice_donor_variant","Vradi05g21740","-","-","-","-","-"]
[5,33136967,"INDEL","TGTAG","T","frameshift_variant","Vradi05g21740","-","-","-","-","-"]
[5,33137150,"INDEL","AT","A","frameshift_variant&start_lost","Vradi05g21740","-","-","-","-","-"]
[5,33155799,"INDEL","CCGCT","C","frameshift_variant","Vradi05g21750","putative N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase GL17147 isoform X5","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[5,33155819,"SNP","A","C","start_lost","Vradi05g21750","putative N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase GL17147 isoform X5","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[5,33172014,"INDEL","TACACCATACTTCTTAGTGGTTGGTGCAGGTTGAAAAACTTGCTGGAA","T","frameshift_variant","Vradi05g21760","pentatricopeptide repeat-containing protein At5g14820, mitochondrial-like","-","-","-","-"]
[5,33172956,"INDEL","GAAGGACC","G","frameshift_variant&splice_acceptor_variant","Vradi05g21760","pentatricopeptide repeat-containing protein At5g14820, mitochondrial-like","-","-","-","-"]
[5,33173010,"INDEL","TTC","T","frameshift_variant","Vradi05g21760","pentatricopeptide repeat-containing protein At5g14820, mitochondrial-like","-","-","-","-"]
[5,33186181,"SNP","A","G","splice_acceptor_variant","Vradi05g21770","COP9 signalosome complex subunit 3","-","-","-","-"]
[5,33231185,"INDEL","CT","C","frameshift_variant","Vradi05g21820","F-box protein At5g07670","-","-","-","-"]
[5,33231572,"SNP","C","T","stop_gained","Vradi05g21820","F-box protein At5g07670","-","-","-","-"]
[5,33231624,"INDEL","CG","C","frameshift_variant","Vradi05g21820","F-box protein At5g07670","-","-","-","-"]
[5,33231707,"INDEL","A","ATT","frameshift_variant","Vradi05g21820","F-box protein At5g07670","-","-","-","-"]
[5,33347536,"SNP","A","T","stop_gained","Vradi05g21910","uncharacterized protein LOC106761074","protein folding [GO:0006457]; protein transport [GO:0015031]","-","-","protein folding [GO:0006457]; protein transport [GO:0015031]"]
[5,33457114,"SNP","T","C","splice_donor_variant","Vradi05g21970","receptor-like protein kinase BRI1-like 3","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,33576731,"SNP","A","G","splice_acceptor_variant","Vradi05g22050","Molybdopterin synthase sulfur carrier subunit (Molybdenum cofactor synthesis protein 2 small subunit) (Molybdenum cofactor synthesis protein 2A) (MOCS2A) (Sulfur carrier protein MOCS2A)","Mo-molybdopterin cofactor biosynthetic process [GO:0006777]","cytosol [GO:0005829]; molybdopterin synthase complex [GO:0019008]","molybdopterin synthase activity [GO:0030366]; nucleotide binding [GO:0000166]","cytosol [GO:0005829]; molybdopterin synthase complex [GO:0019008]; molybdopterin synthase activity [GO:0030366]; nucleotide binding [GO:0000166]; Mo-molybdopterin cofactor biosynthetic process [GO:0006777]"]
[5,33618257,"INDEL","G","GT","frameshift_variant","Vradi05g22100","uncharacterized WD repeat-containing protein C2A9.03","-","-","-","-"]
[5,33676260,"INDEL","TGA","T","frameshift_variant","Vradi05g22160","serine/threonine-protein kinase D6PKL1-like","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,33676363,"SNP","G","T","stop_gained","Vradi05g22160","serine/threonine-protein kinase D6PKL1-like","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[5,33819453,"INDEL","TCTTCAAACTCACATCA","T","splice_donor_variant","Vradi05g22280","E3 ubiquitin-protein ligase RNF170 (EC 2.3.2.27) (RING finger protein 170) (RING-type E3 ubiquitin transferase RNF170)","-","integral component of membrane [GO:0016021]","ubiquitin protein ligase activity [GO:0061630]","integral component of membrane [GO:0016021]; ubiquitin protein ligase activity [GO:0061630]"]
[5,33860014,"INDEL","AATACAAACCTCGAAAATAACCAAATCATTAGCAACAGCACACTGGGAGCCCCCTCTAACAGGGGCAGGGAGCAGCATTGCACTTTTGGTACAGATGAAAATGTAAGTGATTACAACATGACCGTAATCAATTACAATTG","A","frameshift_variant&splice_donor_variant","Vradi05g22340","uncharacterized protein LOC111241305","-","-","-","-"]
[5,33860057,"INDEL","TGGGAGCCCCCTCTAACAGGGGCAGGGAGCAGCATTGCACTTTTGGTACAGATGAAAATGTAAGTGATTACAACATGACCGTAATCAATTACAATTGCAAACACTGAATAC","TGGGGAGCCCCCTCTAACAGGGGCAGGGAGCAGCATTGCACTTTTGGTACAGATGAAAATGTAAGTGATTACAACATGACCGTAATCAATTACAATTGCAAACACTGAATAC","frameshift_variant","Vradi05g22340","uncharacterized protein LOC111241305","-","-","-","-"]
[5,34463111,"SNP","A","G","stop_lost","Vradi05g22480","-","-","-","-","-"]
[5,34476085,"SNP","A","G","splice_donor_variant","Vradi05g22500","-","-","-","-","-"]
[5,34476625,"INDEL","T","TA","splice_donor_variant","Vradi05g22500","-","-","-","-","-"]
[5,34498037,"SNP","A","G","stop_lost","Vradi05g22510","transcription factor MYB101-like","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[5,34552605,"SNP","C","A","splice_acceptor_variant","Vradi05g22530","Hexosyltransferase (EC 2.4.1.-)","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","transferase activity, transferring hexosyl groups [GO:0016758]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; transferase activity, transferring hexosyl groups [GO:0016758]; protein glycosylation [GO:0006486]"]
[5,34604262,"INDEL","TA","T","frameshift_variant","Vradi05g22550","Aconitate hydratase (Aconitase) (EC 4.2.1.3)","-","-","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]"]
[5,34605541,"SNP","G","T","stop_gained","Vradi05g22550","Aconitate hydratase (Aconitase) (EC 4.2.1.3)","-","-","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]"]
[5,34605778,"SNP","G","T","stop_gained","Vradi05g22550","Aconitate hydratase (Aconitase) (EC 4.2.1.3)","-","-","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]"]
[5,34605941,"INDEL","AAATTCTTATAATTGTCATGGGCAGACATAGTGGCTGCTGCTGTGTTGTCTGGG","A","frameshift_variant&splice_acceptor_variant","Vradi05g22550","Aconitate hydratase (Aconitase) (EC 4.2.1.3)","-","-","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]","4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]"]
[5,34871468,"SNP","G","C","splice_acceptor_variant","Vradi05g22650","-","-","-","-","-"]
[5,34931188,"SNP","C","G","stop_lost","Vradi05g22750","SPX and EXS domain-containing protein 5 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[5,35030324,"INDEL","G","GT","frameshift_variant","Vradi05g22810","Beta-amylase (EC 3.2.1.2)","polysaccharide catabolic process [GO:0000272]","-","amylopectin maltohydrolase activity [GO:0102229]; beta-amylase activity [GO:0016161]","amylopectin maltohydrolase activity [GO:0102229]; beta-amylase activity [GO:0016161]; polysaccharide catabolic process [GO:0000272]"]
[5,35173002,"SNP","C","G","stop_gained","Vradi05g22870","-","-","-","-","-"]
[5,35431366,"INDEL","CA","C","frameshift_variant","Vradi05g22980","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; recognition of pollen [GO:0048544]"]
[5,35662890,"INDEL","C","CG","frameshift_variant","Vradi05g23100","uncharacterized protein LOC106760307","-","-","-","-"]
[5,35672869,"INDEL","T","TA","frameshift_variant","Vradi05g23110","-","-","-","-","-"]
[5,35719177,"SNP","C","T","stop_gained","Vradi05g23130","Hexosyltransferase (EC 2.4.1.-)","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","transferase activity, transferring hexosyl groups [GO:0016758]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; transferase activity, transferring hexosyl groups [GO:0016758]; protein glycosylation [GO:0006486]"]
[5,35719649,"INDEL","TCTAC","T","frameshift_variant","Vradi05g23130","Hexosyltransferase (EC 2.4.1.-)","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","transferase activity, transferring hexosyl groups [GO:0016758]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; transferase activity, transferring hexosyl groups [GO:0016758]; protein glycosylation [GO:0006486]"]
[5,35721050,"INDEL","G","GT","frameshift_variant","Vradi05g23130","Hexosyltransferase (EC 2.4.1.-)","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","transferase activity, transferring hexosyl groups [GO:0016758]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; transferase activity, transferring hexosyl groups [GO:0016758]; protein glycosylation [GO:0006486]"]
[5,35768714,"INDEL","GATTTCTCTCAAAC","G","frameshift_variant","Vradi05g23160","uncharacterized protein LOC111240655","-","-","-","-"]
[5,35768735,"INDEL","GT","G","frameshift_variant","Vradi05g23160","uncharacterized protein LOC111240655","-","-","-","-"]
[5,35768789,"INDEL","CGG","C","frameshift_variant","Vradi05g23160","uncharacterized protein LOC111240655","-","-","-","-"]
[5,35768792,"INDEL","CCT","C","frameshift_variant","Vradi05g23160","uncharacterized protein LOC111240655","-","-","-","-"]
[5,35768803,"SNP","T","A","stop_gained","Vradi05g23160","uncharacterized protein LOC111240655","-","-","-","-"]
[5,35768960,"SNP","C","T","stop_gained","Vradi05g23160","uncharacterized protein LOC111240655","-","-","-","-"]
[5,35885785,"SNP","C","T","stop_gained","Vradi05g23210","protein IQ-DOMAIN 1-like","-","-","-","-"]
[5,36019070,"INDEL","TAA","T","frameshift_variant","Vradi05g23260","sodium/calcium exchanger NCL2","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","calcium ion binding [GO:0005509]","integral component of membrane [GO:0016021]; calcium ion binding [GO:0005509]; transmembrane transport [GO:0055085]"]
[5,36019073,"INDEL","TAATGAGA","T","frameshift_variant","Vradi05g23260","sodium/calcium exchanger NCL2","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","calcium ion binding [GO:0005509]","integral component of membrane [GO:0016021]; calcium ion binding [GO:0005509]; transmembrane transport [GO:0055085]"]
[5,36019084,"INDEL","ATTAGTAAGGTGGCGTTTCTTAACTCAGAAGAGAAATTGAATAAATTTGGGATTTGC","A","frameshift_variant","Vradi05g23260","sodium/calcium exchanger NCL2","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","calcium ion binding [GO:0005509]","integral component of membrane [GO:0016021]; calcium ion binding [GO:0005509]; transmembrane transport [GO:0055085]"]
[5,36257649,"SNP","A","T","stop_gained","Vradi05g23370","stress response protein nst1","-","-","-","-"]
[5,36257673,"SNP","G","T","stop_gained","Vradi05g23370","stress response protein nst1","-","-","-","-"]
[5,36286595,"INDEL","CA","C","frameshift_variant","Vradi05g23390","uncharacterized protein LOC106760684 isoform X1","recombinational repair [GO:0000725]","-","-","recombinational repair [GO:0000725]"]
[5,36304496,"INDEL","CGTCGCTTCTTCGGCGG","C","frameshift_variant","Vradi05g23400","uncharacterized protein LOC106762091","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]; metal ion binding [GO:0046872]"]
[5,36595096,"INDEL","TGAGAGA","TGAGA","frameshift_variant&start_lost","Vradi05g23500","protein RICE SALT SENSITIVE 3 isoform X1","-","-","-","-"]
[5,36788061,"SNP","C","T","stop_gained","Vradi05g23560","glycerol-3-phosphate acyltransferase 4-like","-","integral component of membrane [GO:0016021]","transferase activity, transferring acyl groups [GO:0016746]","integral component of membrane [GO:0016021]; transferase activity, transferring acyl groups [GO:0016746]"]
[6,73183,"INDEL","AACACTAATCATAATGG","A","frameshift_variant","Vradi06g00050","uncharacterized protein LOC106768308","-","integral component of membrane [GO:0016021]","DNA binding [GO:0003677]","integral component of membrane [GO:0016021]; DNA binding [GO:0003677]"]
[6,73221,"INDEL","TAGCA","T","frameshift_variant","Vradi06g00050","uncharacterized protein LOC106768308","-","integral component of membrane [GO:0016021]","DNA binding [GO:0003677]","integral component of membrane [GO:0016021]; DNA binding [GO:0003677]"]
[6,84333,"INDEL","G","GT","frameshift_variant","Vradi06g00050","uncharacterized protein LOC106768308","-","integral component of membrane [GO:0016021]","DNA binding [GO:0003677]","integral component of membrane [GO:0016021]; DNA binding [GO:0003677]"]
[6,121684,"INDEL","GGTTGAAA","G","frameshift_variant","Vradi06g00090","Protein DETOXIFICATION (Multidrug and toxic compound extrusion protein)","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[6,207791,"SNP","T","A","splice_acceptor_variant","Vradi06g00160","AP complex subunit sigma","intracellular protein transport [GO:0006886]","membrane [GO:0016020]","-","membrane [GO:0016020]; intracellular protein transport [GO:0006886]"]
[6,207856,"SNP","G","T","splice_donor_variant","Vradi06g00160","AP complex subunit sigma","intracellular protein transport [GO:0006886]","membrane [GO:0016020]","-","membrane [GO:0016020]; intracellular protein transport [GO:0006886]"]
[6,227833,"INDEL","AG","A","frameshift_variant","Vradi06g00210","putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial","-","-","-","-"]
[6,319180,"SNP","A","G","splice_acceptor_variant","Vradi06g00330","uncharacterized protein LOC111241850 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,319393,"INDEL","TG","T","frameshift_variant","Vradi06g00330","uncharacterized protein LOC111241850 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,319403,"INDEL","TTG","T","frameshift_variant&splice_donor_variant","Vradi06g00330","uncharacterized protein LOC111241850 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,508469,"INDEL","TAAGCATAGATTCATCTA","T","frameshift_variant","Vradi06g00560","pentatricopeptide repeat-containing protein At3g53170","-","-","-","-"]
[6,514297,"SNP","C","T","splice_acceptor_variant","Vradi06g00570","heat shock protein 90-6, mitochondrial","protein folding [GO:0006457]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; unfolded protein binding [GO:0051082]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]; unfolded protein binding [GO:0051082]; protein folding [GO:0006457]"]
[6,544187,"INDEL","C","CAATTAGTAACAGAATA","frameshift_variant&stop_gained","Vradi06g00600","nuclear pore complex protein NUP133","-","nucleus [GO:0005634]","structural constituent of nuclear pore [GO:0017056]","nucleus [GO:0005634]; structural constituent of nuclear pore [GO:0017056]"]
[6,605186,"INDEL","G","GTTT","splice_donor_variant","Vradi06g00650","phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X4","phytochromobilin biosynthetic process [GO:0010024]","-","cobalt ion binding [GO:0050897]; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor [GO:0016636]","cobalt ion binding [GO:0050897]; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor [GO:0016636]; phytochromobilin biosynthetic process [GO:0010024]"]
[6,607047,"SNP","G","A","splice_acceptor_variant","Vradi06g00650","phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X4","phytochromobilin biosynthetic process [GO:0010024]","-","cobalt ion binding [GO:0050897]; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor [GO:0016636]","cobalt ion binding [GO:0050897]; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor [GO:0016636]; phytochromobilin biosynthetic process [GO:0010024]"]
[6,646305,"INDEL","GCTGCCAC","G","frameshift_variant","Vradi06g00680","-","-","-","-","-"]
[6,666535,"INDEL","AGTAT","A","frameshift_variant","Vradi06g00690","-","-","-","-","-"]
[6,666540,"INDEL","CAGTTTCTTAAGAGAGA","C","frameshift_variant","Vradi06g00690","-","-","-","-","-"]
[6,666611,"INDEL","T","TG","frameshift_variant","Vradi06g00690","-","-","-","-","-"]
[6,677847,"INDEL","C","CA","frameshift_variant","Vradi06g00700","Phosphopyruvate hydratase (EC 4.2.1.11)","glycolytic process [GO:0006096]","phosphopyruvate hydratase complex [GO:0000015]","magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]","phosphopyruvate hydratase complex [GO:0000015]; magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]; glycolytic process [GO:0006096]"]
[6,911610,"SNP","T","A","splice_donor_variant","Vradi06g00990","cellulose synthase-like protein E1","cellulose biosynthetic process [GO:0030244]","integral component of membrane [GO:0016021]","cellulose synthase (UDP-forming) activity [GO:0016760]","integral component of membrane [GO:0016021]; cellulose synthase (UDP-forming) activity [GO:0016760]; cellulose biosynthetic process [GO:0030244]"]
[6,998016,"SNP","C","T","stop_gained","Vradi06g01050","cysteine synthase 2","cysteine biosynthetic process from serine [GO:0006535]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; cysteine biosynthetic process from serine [GO:0006535]"]
[6,998053,"INDEL","C","CA","frameshift_variant","Vradi06g01050","cysteine synthase 2","cysteine biosynthetic process from serine [GO:0006535]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; cysteine biosynthetic process from serine [GO:0006535]"]
[6,1008783,"SNP","G","T","stop_gained","Vradi06g01080","ring-infected erythrocyte surface antigen","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,1069762,"SNP","C","A","stop_gained","Vradi06g01130","uncharacterized protein LOC106763197","-","-","-","-"]
[6,1069858,"INDEL","ATG","A","frameshift_variant","Vradi06g01130","uncharacterized protein LOC106763197","-","-","-","-"]
[6,1069865,"INDEL","A","AGC","frameshift_variant","Vradi06g01130","uncharacterized protein LOC106763197","-","-","-","-"]
[6,1070021,"INDEL","CAAGTACCTGTACTACGCATTTAAAATTTCGTCACAGGAATTCGCATAATACAGTT","C","splice_acceptor_variant","Vradi06g01130","uncharacterized protein LOC106763197","-","-","-","-"]
[6,1070177,"SNP","C","G","splice_donor_variant","Vradi06g01130","uncharacterized protein LOC106763197","-","-","-","-"]
[6,1134161,"INDEL","TG","T","frameshift_variant","Vradi06g01140","DUF21 domain-containing protein At1g55930, chloroplastic","-","integral component of membrane [GO:0016021]","flavin adenine dinucleotide binding [GO:0050660]","integral component of membrane [GO:0016021]; flavin adenine dinucleotide binding [GO:0050660]"]
[6,1134518,"INDEL","TCC","T","frameshift_variant","Vradi06g01140","DUF21 domain-containing protein At1g55930, chloroplastic","-","integral component of membrane [GO:0016021]","flavin adenine dinucleotide binding [GO:0050660]","integral component of membrane [GO:0016021]; flavin adenine dinucleotide binding [GO:0050660]"]
[6,1134523,"INDEL","AAATGGCG","A","frameshift_variant","Vradi06g01140","DUF21 domain-containing protein At1g55930, chloroplastic","-","integral component of membrane [GO:0016021]","flavin adenine dinucleotide binding [GO:0050660]","integral component of membrane [GO:0016021]; flavin adenine dinucleotide binding [GO:0050660]"]
[6,1134537,"INDEL","GAC","G","frameshift_variant","Vradi06g01140","DUF21 domain-containing protein At1g55930, chloroplastic","-","integral component of membrane [GO:0016021]","flavin adenine dinucleotide binding [GO:0050660]","integral component of membrane [GO:0016021]; flavin adenine dinucleotide binding [GO:0050660]"]
[6,1207915,"SNP","*","T","frameshift_variant","Vradi06g01230","probable inactive receptor kinase At5g53320","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,1207916,"SNP","*","T","frameshift_variant","Vradi06g01230","probable inactive receptor kinase At5g53320","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,1245899,"INDEL","GT","G","frameshift_variant","Vradi06g01290","pirin-like protein","-","-","-","-"]
[6,1256671,"INDEL","ACT","A","frameshift_variant","Vradi06g01300","-","-","-","-","-"]
[6,1256676,"INDEL","T","TAC","frameshift_variant","Vradi06g01300","-","-","-","-","-"]
[6,1389865,"INDEL","AC","A","frameshift_variant","Vradi06g01400","indole-3-acetate O-methyltransferase 1-like","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,1390021,"INDEL","CT","C","frameshift_variant","Vradi06g01400","indole-3-acetate O-methyltransferase 1-like","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,1390104,"INDEL","C","CCTTTG","frameshift_variant","Vradi06g01400","indole-3-acetate O-methyltransferase 1-like","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,1390120,"INDEL","T","TGG","frameshift_variant&stop_lost","Vradi06g01400","indole-3-acetate O-methyltransferase 1-like","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,1413611,"SNP","G","A","splice_acceptor_variant","Vradi06g01430","Phosphatidate cytidylyltransferase (EC 2.7.7.41)","CDP-diacylglycerol biosynthetic process [GO:0016024]","integral component of membrane [GO:0016021]","phosphatidate cytidylyltransferase activity [GO:0004605]","integral component of membrane [GO:0016021]; phosphatidate cytidylyltransferase activity [GO:0004605]; CDP-diacylglycerol biosynthetic process [GO:0016024]"]
[6,1420034,"INDEL","ATAGTG","A","frameshift_variant","Vradi06g01440","Peptidylprolyl isomerase (EC 5.2.1.8)","protein folding [GO:0006457]; protein transport [GO:0015031]","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein folding [GO:0006457]; protein transport [GO:0015031]"]
[6,1492839,"INDEL","CT","C","frameshift_variant","Vradi06g01460","uncharacterized protein LOC111241154","response to oxidative stress [GO:0006979]","-","heme binding [GO:0020037]; peroxidase activity [GO:0004601]","heme binding [GO:0020037]; peroxidase activity [GO:0004601]; response to oxidative stress [GO:0006979]"]
[6,1492859,"SNP","G","A","stop_gained","Vradi06g01460","uncharacterized protein LOC111241154","response to oxidative stress [GO:0006979]","-","heme binding [GO:0020037]; peroxidase activity [GO:0004601]","heme binding [GO:0020037]; peroxidase activity [GO:0004601]; response to oxidative stress [GO:0006979]"]
[6,1492904,"SNP","C","A","stop_gained","Vradi06g01460","uncharacterized protein LOC111241154","response to oxidative stress [GO:0006979]","-","heme binding [GO:0020037]; peroxidase activity [GO:0004601]","heme binding [GO:0020037]; peroxidase activity [GO:0004601]; response to oxidative stress [GO:0006979]"]
[6,1577292,"INDEL","G","GC","frameshift_variant","Vradi06g01500","uncharacterized protein LOC106770629","-","-","enzyme inhibitor activity [GO:0004857]","enzyme inhibitor activity [GO:0004857]"]
[6,1577294,"INDEL","T","TGGTGG","frameshift_variant","Vradi06g01500","uncharacterized protein LOC106770629","-","-","enzyme inhibitor activity [GO:0004857]","enzyme inhibitor activity [GO:0004857]"]
[6,1633971,"SNP","G","T","stop_gained","Vradi06g01580","splicing factor, suppressor of white-apricot homolog isoform X4","RNA processing [GO:0006396]","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]; RNA processing [GO:0006396]"]
[6,1748101,"SNP","G","C","splice_donor_variant","Vradi06g01690","DNA mismatch repair protein MSH5","mismatch repair [GO:0006298]","-","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[6,1870114,"INDEL","A","AT","frameshift_variant","Vradi06g01870","Ubiquitin thioesterase OTU1 (EC 3.4.19.12)","protein deubiquitination [GO:0016579]; ubiquitin-dependent ERAD pathway [GO:0030433]","cytoplasm [GO:0005737]","cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","cytoplasm [GO:0005737]; cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; protein deubiquitination [GO:0016579]; ubiquitin-dependent ERAD pathway [GO:0030433]"]
[6,1870115,"SNP","*","T","frameshift_variant","Vradi06g01870","Ubiquitin thioesterase OTU1 (EC 3.4.19.12)","protein deubiquitination [GO:0016579]; ubiquitin-dependent ERAD pathway [GO:0030433]","cytoplasm [GO:0005737]","cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","cytoplasm [GO:0005737]; cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; protein deubiquitination [GO:0016579]; ubiquitin-dependent ERAD pathway [GO:0030433]"]
[6,1870117,"INDEL","AC","A","frameshift_variant","Vradi06g01870","Ubiquitin thioesterase OTU1 (EC 3.4.19.12)","protein deubiquitination [GO:0016579]; ubiquitin-dependent ERAD pathway [GO:0030433]","cytoplasm [GO:0005737]","cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","cytoplasm [GO:0005737]; cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; protein deubiquitination [GO:0016579]; ubiquitin-dependent ERAD pathway [GO:0030433]"]
[6,2252000,"INDEL","CCT","C","frameshift_variant","Vradi06g02310","uncharacterized protein LOC106764631","-","-","-","-"]
[6,2318837,"INDEL","A","AC","splice_donor_variant","Vradi06g02370","Anaphase-promoting complex subunit 5","cell cycle [GO:0007049]; cell division [GO:0051301]","anaphase-promoting complex [GO:0005680]","-","anaphase-promoting complex [GO:0005680]; cell cycle [GO:0007049]; cell division [GO:0051301]"]
[6,2318893,"INDEL","TG","T","frameshift_variant","Vradi06g02370","Anaphase-promoting complex subunit 5","cell cycle [GO:0007049]; cell division [GO:0051301]","anaphase-promoting complex [GO:0005680]","-","anaphase-promoting complex [GO:0005680]; cell cycle [GO:0007049]; cell division [GO:0051301]"]
[6,2318903,"INDEL","TACCTA","T","frameshift_variant&splice_acceptor_variant","Vradi06g02370","Anaphase-promoting complex subunit 5","cell cycle [GO:0007049]; cell division [GO:0051301]","anaphase-promoting complex [GO:0005680]","-","anaphase-promoting complex [GO:0005680]; cell cycle [GO:0007049]; cell division [GO:0051301]"]
[6,2577590,"SNP","G","A","splice_acceptor_variant","Vradi06g02580","SUN domain-containing protein 1-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,2666212,"INDEL","AG","A","frameshift_variant","Vradi06g02650","Probable magnesium transporter","-","early endosome [GO:0005769]; integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","magnesium ion transmembrane transporter activity [GO:0015095]","early endosome [GO:0005769]; integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; magnesium ion transmembrane transporter activity [GO:0015095]"]
[6,2670221,"INDEL","ATTTCGGATTTGGC","A","frameshift_variant","Vradi06g02660","Mitochondrial fission 1 protein","mitochondrial fission [GO:0000266]; peroxisome fission [GO:0016559]","integral component of membrane [GO:0016021]; mitochondrial outer membrane [GO:0005741]","-","integral component of membrane [GO:0016021]; mitochondrial outer membrane [GO:0005741]; mitochondrial fission [GO:0000266]; peroxisome fission [GO:0016559]"]
[6,2689834,"INDEL","AAAGAAGAAGC","A","frameshift_variant","Vradi06g02690","PH, RCC1 and FYVE domains-containing protein 1 isoform X1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[6,2696533,"SNP","C","A","stop_gained","Vradi06g02690","PH, RCC1 and FYVE domains-containing protein 1 isoform X1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[6,2696964,"SNP","A","T","start_lost","Vradi06g02690","PH, RCC1 and FYVE domains-containing protein 1 isoform X1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[6,2934033,"INDEL","C","CT","frameshift_variant","Vradi06g02900","uncharacterized protein LOC111241827","-","-","-","-"]
[6,3005246,"SNP","G","A","stop_gained","Vradi06g02950","B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-","cell cycle [GO:0007049]; cell division [GO:0051301]"]
[6,3005356,"SNP","C","T","stop_gained","Vradi06g02950","B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-","cell cycle [GO:0007049]; cell division [GO:0051301]"]
[6,3425499,"SNP","G","A","stop_gained","Vradi06g03220","leucine-rich repeat protein 1","-","-","-","-"]
[6,3454155,"SNP","C","T","splice_donor_variant","Vradi06g03240","ETHYLENE INSENSITIVE 3-like 1 protein (ETHYLENE INSENSITIVE 3-like 1 protein isoform X1)","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[6,3454221,"SNP","G","A","stop_gained","Vradi06g03240","ETHYLENE INSENSITIVE 3-like 1 protein (ETHYLENE INSENSITIVE 3-like 1 protein isoform X1)","ethylene-activated signaling pathway [GO:0009873]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; ethylene-activated signaling pathway [GO:0009873]"]
[6,3468088,"INDEL","CT","C","frameshift_variant","Vradi06g03250","probable inactive receptor kinase At5g10020","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,3534705,"INDEL","GTTTGGATTTTGAA","G","frameshift_variant","Vradi06g03310","GDSL esterase/lipase At1g71250-like","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[6,3638895,"SNP","A","G","splice_acceptor_variant","Vradi06g03390","-","-","-","-","-"]
[6,3690337,"INDEL","G","GCC","frameshift_variant","Vradi06g03420","ubiquitin carboxyl-terminal hydrolase 12-like","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[6,3690338,"INDEL","TGA","T","frameshift_variant","Vradi06g03420","ubiquitin carboxyl-terminal hydrolase 12-like","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[6,3748167,"INDEL","TA","T","frameshift_variant","Vradi06g03440","-","-","-","-","-"]
[6,3769157,"INDEL","AC","A","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3769580,"INDEL","CTGTTTGG","C","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3769986,"INDEL","CGT","C","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3769990,"INDEL","T","TCC","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3770082,"INDEL","GAGGCAAACTCT","G","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3770391,"INDEL","G","GAA","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3770392,"INDEL","TGC","T","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3770454,"INDEL","T","TGTGG","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3770654,"INDEL","CA","C","frameshift_variant","Vradi06g03450","polygalacturonase 1 beta-like protein 2","-","-","-","-"]
[6,3845161,"SNP","G","A","stop_gained","Vradi06g03470","uncharacterized protein LOC106765345","ubiquitin-dependent protein catabolic process [GO:0006511]","-","-","ubiquitin-dependent protein catabolic process [GO:0006511]"]
[6,3883642,"INDEL","TA","T","frameshift_variant","Vradi06g03520","uncharacterized protein LOC106763127","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,3883682,"INDEL","A","ACTAGCTTTTCCCTCTT","frameshift_variant","Vradi06g03520","uncharacterized protein LOC106763127","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,4429887,"INDEL","G","GTA","frameshift_variant","Vradi06g03910","heavy metal-associated isoprenylated plant protein 47-like","-","-","-","-"]
[6,4723823,"INDEL","G","GAGACCCACTATTT","frameshift_variant","Vradi06g04020","amino acid transporter AVT6C","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]","integral component of membrane [GO:0016021]; symporter activity [GO:0015293]; amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]"]
[6,4874326,"SNP","G","A","splice_donor_variant","Vradi06g04180","Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)","metabolic process [GO:0008152]","cytosol [GO:0005829]","mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]","cytosol [GO:0005829]; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]; metabolic process [GO:0008152]"]
[6,4876082,"INDEL","CCATGCATTTGAT","C","frameshift_variant&splice_acceptor_variant","Vradi06g04180","Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)","metabolic process [GO:0008152]","cytosol [GO:0005829]","mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]","cytosol [GO:0005829]; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]; metabolic process [GO:0008152]"]
[6,4877954,"INDEL","CTGATGAAGTCTGTGGAAAATGCAGGTGAAATCTGAT","C","splice_acceptor_variant","Vradi06g04180","Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)","metabolic process [GO:0008152]","cytosol [GO:0005829]","mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]","cytosol [GO:0005829]; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]; metabolic process [GO:0008152]"]
[6,4877994,"INDEL","AAATCTTC","A","frameshift_variant","Vradi06g04180","Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)","metabolic process [GO:0008152]","cytosol [GO:0005829]","mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]","cytosol [GO:0005829]; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]; metabolic process [GO:0008152]"]
[6,4878004,"INDEL","TGGGAATCGTGC","T","frameshift_variant","Vradi06g04180","Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)","metabolic process [GO:0008152]","cytosol [GO:0005829]","mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]","cytosol [GO:0005829]; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]; metabolic process [GO:0008152]"]
[6,4878018,"INDEL","AAGTT","A","frameshift_variant","Vradi06g04180","Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)","metabolic process [GO:0008152]","cytosol [GO:0005829]","mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]","cytosol [GO:0005829]; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]; metabolic process [GO:0008152]"]
[6,4878053,"INDEL","GTTACTCACTTCCC","GTACTCACTTCCC","frameshift_variant","Vradi06g04180","Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)","metabolic process [GO:0008152]","cytosol [GO:0005829]","mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]","cytosol [GO:0005829]; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity [GO:0033925]; metabolic process [GO:0008152]"]
[6,4912398,"INDEL","T","TCA","frameshift_variant","Vradi06g04190","Ferritin (EC 1.16.3.1)","cellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]","chloroplast [GO:0009507]","ferric iron binding [GO:0008199]; ferroxidase activity [GO:0004322]","chloroplast [GO:0009507]; ferric iron binding [GO:0008199]; ferroxidase activity [GO:0004322]; cellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]"]
[6,4915068,"INDEL","C","CCCCT","frameshift_variant","Vradi06g04190","Ferritin (EC 1.16.3.1)","cellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]","chloroplast [GO:0009507]","ferric iron binding [GO:0008199]; ferroxidase activity [GO:0004322]","chloroplast [GO:0009507]; ferric iron binding [GO:0008199]; ferroxidase activity [GO:0004322]; cellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]"]
[6,4915073,"INDEL","TATTATGTG","T","frameshift_variant","Vradi06g04190","Ferritin (EC 1.16.3.1)","cellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]","chloroplast [GO:0009507]","ferric iron binding [GO:0008199]; ferroxidase activity [GO:0004322]","chloroplast [GO:0009507]; ferric iron binding [GO:0008199]; ferroxidase activity [GO:0004322]; cellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]"]
[6,5025932,"INDEL","A","AT","frameshift_variant&start_lost","Vradi06g04300","omega-hydroxypalmitate O-feruloyl transferase","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[6,5094721,"INDEL","T","TA","frameshift_variant","Vradi06g04360","-","-","-","-","-"]
[6,5094808,"INDEL","A","AT","frameshift_variant","Vradi06g04360","-","-","-","-","-"]
[6,5121993,"INDEL","CACCGCTCTTCATAGGGGAGTTCACGCTAT","C","frameshift_variant&stop_lost","Vradi06g04390","-","-","-","-","-"]
[6,5181769,"INDEL","ACTCTTCCCTTTT","ATCTCTTCCCTTTT","frameshift_variant","Vradi06g04420","gibberellin 2-beta-dioxygenase 1","-","-","dioxygenase activity [GO:0051213]","dioxygenase activity [GO:0051213]"]
[6,5181771,"INDEL","C","CTCTTCCCTTTT","frameshift_variant","Vradi06g04420","gibberellin 2-beta-dioxygenase 1","-","-","dioxygenase activity [GO:0051213]","dioxygenase activity [GO:0051213]"]
[6,5199206,"SNP","A","G","splice_acceptor_variant","Vradi06g04430","uncharacterized protein LOC106765269 isoform X1","protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]"]
[6,5452916,"INDEL","CAAAGTCTATACTTATGACCCTAGCTTCCTTAT","C","frameshift_variant&stop_lost","Vradi06g04600","uncharacterized protein LOC106764420","-","-","histone-lysine N-methyltransferase activity [GO:0018024]","histone-lysine N-methyltransferase activity [GO:0018024]"]
[6,5486163,"INDEL","CTTTTTTTTCGATTGTAATCTGCTGCATAGTTTTGTG","CTTTTTTTCGATTGTAATCTGCTGCATAGTTTTGTG","frameshift_variant","Vradi06g04640","-","-","-","-","-"]
[6,5486171,"INDEL","TCGATTG","TGATTG","frameshift_variant","Vradi06g04640","-","-","-","-","-"]
[6,5486631,"SNP","G","A","splice_donor_variant","Vradi06g04640","-","-","-","-","-"]
[6,5486769,"INDEL","AC","A","frameshift_variant","Vradi06g04640","-","-","-","-","-"]
[6,5597389,"INDEL","GA","G","splice_donor_variant","Vradi06g04730","probable signal peptidase complex subunit 2","signal peptide processing [GO:0006465]","integral component of membrane [GO:0016021]; signal peptidase complex [GO:0005787]","-","integral component of membrane [GO:0016021]; signal peptidase complex [GO:0005787]; signal peptide processing [GO:0006465]"]
[6,5598462,"INDEL","A","AAG","frameshift_variant","Vradi06g04730","probable signal peptidase complex subunit 2","signal peptide processing [GO:0006465]","integral component of membrane [GO:0016021]; signal peptidase complex [GO:0005787]","-","integral component of membrane [GO:0016021]; signal peptidase complex [GO:0005787]; signal peptide processing [GO:0006465]"]
[6,5613495,"INDEL","T","TGGTTTTATAGATGAC","stop_gained","Vradi06g04740","uncharacterized protein LOC106764802","-","-","-","-"]
[6,5697235,"INDEL","A","AC","frameshift_variant","Vradi06g04800","-","-","-","-","-"]
[6,5697421,"INDEL","AG","A","frameshift_variant","Vradi06g04800","-","-","-","-","-"]
[6,6060752,"INDEL","AAT","A","frameshift_variant","Vradi06g04940","-","-","-","-","-"]
[6,6135294,"SNP","C","T","stop_gained","Vradi06g05040","Histone acetyltransferase (EC 2.3.1.48)","chromatin silencing at telomere [GO:0006348]","chromosome, telomeric region [GO:0000781]; nucleus [GO:0005634]","histone acetyltransferase activity [GO:0004402]","chromosome, telomeric region [GO:0000781]; nucleus [GO:0005634]; histone acetyltransferase activity [GO:0004402]; chromatin silencing at telomere [GO:0006348]"]
[6,6135980,"SNP","G","A","stop_gained","Vradi06g05040","Histone acetyltransferase (EC 2.3.1.48)","chromatin silencing at telomere [GO:0006348]","chromosome, telomeric region [GO:0000781]; nucleus [GO:0005634]","histone acetyltransferase activity [GO:0004402]","chromosome, telomeric region [GO:0000781]; nucleus [GO:0005634]; histone acetyltransferase activity [GO:0004402]; chromatin silencing at telomere [GO:0006348]"]
[6,6135997,"INDEL","TTTTATTCATATGCCGA","T","frameshift_variant","Vradi06g05040","Histone acetyltransferase (EC 2.3.1.48)","chromatin silencing at telomere [GO:0006348]","chromosome, telomeric region [GO:0000781]; nucleus [GO:0005634]","histone acetyltransferase activity [GO:0004402]","chromosome, telomeric region [GO:0000781]; nucleus [GO:0005634]; histone acetyltransferase activity [GO:0004402]; chromatin silencing at telomere [GO:0006348]"]
[6,6225007,"INDEL","GC","G","frameshift_variant","Vradi06g05110","-","-","-","-","-"]
[6,6225009,"SNP","C","T","stop_gained","Vradi06g05110","-","-","-","-","-"]
[6,6225267,"SNP","C","T","stop_gained","Vradi06g05110","-","-","-","-","-"]
[6,6241384,"INDEL","CA","C","frameshift_variant","Vradi06g05120","ARF guanine-nucleotide exchange factor GNOM","regulation of ARF protein signal transduction [GO:0032012]","cytosol [GO:0005829]; membrane [GO:0016020]","guanyl-nucleotide exchange factor activity [GO:0005085]","cytosol [GO:0005829]; membrane [GO:0016020]; guanyl-nucleotide exchange factor activity [GO:0005085]; regulation of ARF protein signal transduction [GO:0032012]"]
[6,6429887,"INDEL","AC","A","frameshift_variant","Vradi06g05190","-","-","-","-","-"]
[6,6429962,"SNP","A","G","stop_lost","Vradi06g05190","-","-","-","-","-"]
[6,6510943,"INDEL","TTAAATGTCTTTTG","T","splice_acceptor_variant","Vradi06g05250","AP-3 complex subunit beta","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","AP-3 adaptor complex [GO:0030123]","-","AP-3 adaptor complex [GO:0030123]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[6,6616516,"INDEL","C","CACATTTCACAT","frameshift_variant","Vradi06g05350","myb-related protein 308","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[6,6616567,"SNP","C","T","stop_gained","Vradi06g05350","myb-related protein 308","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[6,6616605,"INDEL","A","AAT","frameshift_variant","Vradi06g05350","myb-related protein 308","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[6,6649340,"SNP","*","C","frameshift_variant","Vradi06g05370","uncharacterized protein LOC106763162","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,6820283,"INDEL","C","CAT","frameshift_variant","Vradi06g05460","uncharacterized protein LOC106765090 isoform X1","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]"]
[6,6820326,"SNP","C","T","splice_acceptor_variant","Vradi06g05460","uncharacterized protein LOC106765090 isoform X1","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]"]
[6,7374764,"INDEL","AT","A","frameshift_variant","Vradi06g05850","Glutamate decarboxylase (EC 4.1.1.15)","glutamate metabolic process [GO:0006536]","-","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]; glutamate metabolic process [GO:0006536]"]
[6,7374925,"INDEL","TCG","T","frameshift_variant","Vradi06g05850","Glutamate decarboxylase (EC 4.1.1.15)","glutamate metabolic process [GO:0006536]","-","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]; glutamate metabolic process [GO:0006536]"]
[6,7375200,"INDEL","GA","GGTTTTGGAGGAA","frameshift_variant","Vradi06g05850","Glutamate decarboxylase (EC 4.1.1.15)","glutamate metabolic process [GO:0006536]","-","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]","glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]; glutamate metabolic process [GO:0006536]"]
[6,7501561,"INDEL","TC","T","frameshift_variant","Vradi06g05940","NAC domain-containing protein 86","regulation of transcription, DNA-templated [GO:0006355]","integral component of membrane [GO:0016021]","DNA binding [GO:0003677]","integral component of membrane [GO:0016021]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[6,7624524,"SNP","A","T","stop_gained","Vradi06g06050","probable helicase MAGATAMA 3","-","-","helicase activity [GO:0004386]","helicase activity [GO:0004386]"]
[6,7816062,"INDEL","CAATTTAGCAAAAGGTA","C","frameshift_variant","Vradi06g06170","-","-","-","-","-"]
[6,7942407,"INDEL","ATT","A","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942417,"INDEL","C","CAT","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942418,"INDEL","CCT","C","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942443,"INDEL","TTC","T","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942450,"INDEL","AAGTG","A","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942573,"INDEL","TGA","T","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942584,"INDEL","TTGAC","T","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942639,"INDEL","AGC","A","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,7942645,"INDEL","T","TAA","frameshift_variant","Vradi06g06240","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,8030267,"INDEL","TG","T","frameshift_variant","Vradi06g06290","probable disease resistance protein At4g27220","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[6,8030271,"INDEL","G","GT","frameshift_variant&stop_gained","Vradi06g06290","probable disease resistance protein At4g27220","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[6,8033753,"SNP","C","A","stop_lost","Vradi06g06300","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,8034993,"SNP","C","T","splice_donor_variant","Vradi06g06300","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,8046245,"INDEL","C","CA","frameshift_variant","Vradi06g06300","probable LRR receptor-like serine/threonine-protein kinase At1g06840","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,8229380,"INDEL","T","TG","frameshift_variant","Vradi06g06380","uncharacterized protein LOC111241074","-","-","-","-"]
[6,8331831,"INDEL","C","CA","frameshift_variant","Vradi06g06420","-","-","-","-","-"]
[6,8332733,"SNP","C","T","splice_donor_variant","Vradi06g06420","-","-","-","-","-"]
[6,8644180,"INDEL","TC","T","frameshift_variant","Vradi06g06530","uncharacterized protein LOC106764494","-","-","-","-"]
[6,8801341,"INDEL","G","GC","frameshift_variant","Vradi06g06650","putative tRNA pseudouridine synthase","tRNA pseudouridine synthesis [GO:0031119]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; tRNA pseudouridine synthesis [GO:0031119]"]
[6,8807534,"SNP","T","C","splice_acceptor_variant","Vradi06g06660","-","-","-","-","-"]
[6,9608298,"INDEL","CTT","C","frameshift_variant","Vradi06g06870","-","-","-","-","-"]
[6,10395214,"INDEL","CTG","C","frameshift_variant","Vradi06g07230","protein NTM1-like 9 isoform X2","regulation of transcription, DNA-templated [GO:0006355]","integral component of membrane [GO:0016021]","DNA binding [GO:0003677]","integral component of membrane [GO:0016021]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[6,10395299,"INDEL","AAGCAG","A","frameshift_variant","Vradi06g07230","protein NTM1-like 9 isoform X2","regulation of transcription, DNA-templated [GO:0006355]","integral component of membrane [GO:0016021]","DNA binding [GO:0003677]","integral component of membrane [GO:0016021]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[6,10395306,"INDEL","A","ATCATC","frameshift_variant","Vradi06g07230","protein NTM1-like 9 isoform X2","regulation of transcription, DNA-templated [GO:0006355]","integral component of membrane [GO:0016021]","DNA binding [GO:0003677]","integral component of membrane [GO:0016021]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[6,10405855,"INDEL","G","GCT","frameshift_variant","Vradi06g07240","uncharacterized calcium-binding protein At1g02270 isoform X3","-","-","-","-"]
[6,10405858,"INDEL","TGA","T","frameshift_variant","Vradi06g07240","uncharacterized calcium-binding protein At1g02270 isoform X3","-","-","-","-"]
[6,10476621,"INDEL","A","AC","frameshift_variant","Vradi06g07270","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[6,10476623,"INDEL","A","ATG","frameshift_variant","Vradi06g07270","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[6,10566646,"SNP","G","A","stop_gained","Vradi06g07300","L-type lectin-domain containing receptor kinase VIII.2","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]"]
[6,10578835,"INDEL","G","GTA","frameshift_variant","Vradi06g07310","UNC93-like protein 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,10578839,"INDEL","AAC","A","frameshift_variant","Vradi06g07310","UNC93-like protein 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,10578855,"INDEL","CCACACACTCG","C","frameshift_variant","Vradi06g07310","UNC93-like protein 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,10578867,"INDEL","T","TA","frameshift_variant","Vradi06g07310","UNC93-like protein 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,10578949,"INDEL","C","CAA","frameshift_variant","Vradi06g07310","UNC93-like protein 1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,10648903,"INDEL","G","GGT","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10648905,"INDEL","CAA","C","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10648992,"INDEL","TTCTGG","T","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10649000,"INDEL","T","TGC","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10649303,"INDEL","GTTGTT","G","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10649333,"INDEL","T","TTCAAG","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10649339,"INDEL","TC","T","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10649341,"INDEL","AGATG","A","frameshift_variant","Vradi06g07360","thaumatin-like protein 1 isoform X1","-","-","-","-"]
[6,10846751,"INDEL","TGAGTGAGCTTTTGATTCAGCATGCTAAAAAGGGTTCCATATTTG","T","frameshift_variant&splice_acceptor_variant","Vradi06g07460","uncharacterized protein LOC106763921","-","-","-","-"]
[6,11222547,"INDEL","CGGCA","C","frameshift_variant","Vradi06g07620","uncharacterized protein LOC106780473","-","-","-","-"]
[6,11222554,"INDEL","T","TAAAA","frameshift_variant","Vradi06g07620","uncharacterized protein LOC106780473","-","-","-","-"]
[6,11630835,"SNP","A","C","stop_gained","Vradi06g07650","uncharacterized protein LOC111242696","-","-","-","-"]
[6,11631615,"INDEL","A","AT","frameshift_variant","Vradi06g07650","uncharacterized protein LOC111242696","-","-","-","-"]
[6,11631667,"SNP","C","T","stop_gained","Vradi06g07650","uncharacterized protein LOC111242696","-","-","-","-"]
[6,11962445,"INDEL","G","GT","frameshift_variant","Vradi06g07700","-","-","-","-","-"]
[6,11962519,"INDEL","GA","G","frameshift_variant","Vradi06g07700","-","-","-","-","-"]
[6,12164965,"SNP","C","T","stop_gained","Vradi06g07760","uncharacterized protein LOC106755486","-","integral component of membrane [GO:0016021]","methyltransferase activity [GO:0008168]","integral component of membrane [GO:0016021]; methyltransferase activity [GO:0008168]"]
[6,12514086,"INDEL","C","CT","frameshift_variant","Vradi06g07820","-","-","-","-","-"]
[6,12678364,"SNP","A","C","stop_gained","Vradi06g07870","-","-","-","-","-"]
[6,13167998,"SNP","G","T","stop_gained","Vradi06g07930","uncharacterized protein LOC111242669","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[6,13908538,"SNP","C","T","stop_gained","Vradi06g08040","MAGE-like protein 2","-","-","-","-"]
[6,13909963,"SNP","C","T","stop_gained","Vradi06g08040","MAGE-like protein 2","-","-","-","-"]
[6,13980696,"INDEL","T","TG","frameshift_variant","Vradi06g08070","-","-","-","-","-"]
[6,14651020,"INDEL","AAG","A","frameshift_variant","Vradi06g08200","pentatricopeptide repeat-containing protein At4g31850, chloroplastic","-","-","-","-"]
[6,14994530,"SNP","*","C","frameshift_variant","Vradi06g08270","-","-","-","-","-"]
[6,15652083,"INDEL","C","CGT","frameshift_variant","Vradi06g08360","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]"]
[6,15652086,"INDEL","TCTTG","T","frameshift_variant","Vradi06g08360","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]"]
[6,15652092,"INDEL","G","GCT","frameshift_variant","Vradi06g08360","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]"]
[6,15652151,"INDEL","GC","G","frameshift_variant","Vradi06g08360","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]"]
[6,15652156,"INDEL","A","AC","frameshift_variant","Vradi06g08360","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]"]
[6,15714165,"INDEL","GGAAC","G","frameshift_variant","Vradi06g08380","rust resistance kinase Lr10-like","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,15714578,"INDEL","AAG","A","frameshift_variant","Vradi06g08380","rust resistance kinase Lr10-like","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,15714607,"SNP","C","A","stop_gained","Vradi06g08380","rust resistance kinase Lr10-like","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,15714621,"INDEL","GAC","G","frameshift_variant","Vradi06g08380","rust resistance kinase Lr10-like","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,15887754,"SNP","G","A","stop_gained","Vradi06g08420","-","-","-","-","-"]
[6,15888221,"SNP","G","C","stop_lost","Vradi06g08420","-","-","-","-","-"]
[6,15940206,"SNP","A","G","stop_lost","tRNA-Tyr","-","-","-","-","-"]
[6,15996800,"SNP","C","A","stop_gained","Vradi06g08450","-","-","-","-","-"]
[6,16266374,"SNP","A","G","splice_donor_variant","Vradi06g08540","uncharacterized protein LOC106764190","-","-","-","-"]
[6,16401678,"INDEL","CGTGTCTTCAGATGAAATTTCT","C","frameshift_variant&splice_acceptor_variant","Vradi06g08560","-","-","-","-","-"]
[6,16402247,"INDEL","AATGGGGAAAGCAATAATGAATAACAACAAAAAGTAC","A","splice_donor_variant","Vradi06g08560","-","-","-","-","-"]
[6,16402310,"INDEL","G","GATCAATAATATTTGACATGTACA","frameshift_variant","Vradi06g08560","-","-","-","-","-"]
[6,16437255,"INDEL","GA","G","frameshift_variant","Vradi06g08570","-","-","-","-","-"]
[6,16437259,"INDEL","CA","C","frameshift_variant&start_lost","Vradi06g08570","-","-","-","-","-"]
[6,16457972,"SNP","T","G","splice_acceptor_variant","Vradi06g08600","-","-","-","-","-"]
[6,16554609,"SNP","C","T","splice_acceptor_variant","Vradi06g08630","Vacuolar cation/proton exchanger","-","integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774]","calcium:proton antiporter activity [GO:0015369]","integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774]; calcium:proton antiporter activity [GO:0015369]"]
[6,17902507,"SNP","T","A","stop_gained","Vradi06g09010","ADP,ATP carrier protein","-","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]","ATP:ADP antiporter activity [GO:0005471]; ATP binding [GO:0005524]","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP:ADP antiporter activity [GO:0005471]"]
[6,17929203,"INDEL","TG","T","frameshift_variant","Vradi06g09020","early nodulin-93-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,18023624,"INDEL","TCC","T","frameshift_variant","Vradi06g09070","-","-","-","-","-"]
[6,18023628,"INDEL","TG","T","frameshift_variant","Vradi06g09070","-","-","-","-","-"]
[6,18023637,"INDEL","TC","T","frameshift_variant","Vradi06g09070","-","-","-","-","-"]
[6,18172152,"INDEL","GTATGTTTTTAAGAAATGTTAGGTAGCACTGTGTAACTA","G","splice_donor_variant","Vradi06g09090","ultraviolet-B receptor UVR8 isoform X1","-","-","-","-"]
[6,18692506,"SNP","C","T","stop_gained","Vradi06g09180","-","-","-","-","-"]
[6,18749051,"INDEL","GAACAAGAAGAA","G","frameshift_variant","Vradi06g09200","Cytochrome b","respiratory electron transport chain [GO:0022904]","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]","metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]; metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]; respiratory electron transport chain [GO:0022904]"]
[6,18898553,"INDEL","C","CA","frameshift_variant","Vradi06g09230","-","-","-","-","-"]
[6,18898554,"SNP","*","A","frameshift_variant","Vradi06g09230","-","-","-","-","-"]
[6,18960149,"INDEL","CACAGTAATTTCAT","C","frameshift_variant&stop_lost","Vradi06g09250","uncharacterized protein LOC106763956","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,19014400,"INDEL","TGGTTGCAG","T","splice_acceptor_variant","Vradi06g09260","-","-","-","-","-"]
[6,19014745,"SNP","C","T","stop_gained","Vradi06g09260","-","-","-","-","-"]
[6,19014752,"INDEL","GT","G","frameshift_variant","Vradi06g09260","-","-","-","-","-"]
[6,19206407,"INDEL","CAT","C","frameshift_variant","Vradi06g09320","-","-","-","-","-"]
[6,19213771,"SNP","G","A","stop_gained","Vradi06g09310","-","-","-","-","-"]
[6,19459333,"SNP","G","A","stop_gained","Vradi06g09350","protein MAIN-LIKE 1-like","-","-","-","-"]
[6,19629027,"SNP","G","A","stop_gained","Vradi06g09360","uncharacterized protein LOC111240721 isoform X1","-","-","-","-"]
[6,19629439,"SNP","C","A","stop_gained","Vradi06g09360","uncharacterized protein LOC111240721 isoform X1","-","-","-","-"]
[6,19629821,"SNP","A","C","stop_gained","Vradi06g09360","uncharacterized protein LOC111240721 isoform X1","-","-","-","-"]
[6,19632716,"INDEL","AT","A","frameshift_variant","Vradi06g09360","uncharacterized protein LOC111240721 isoform X1","-","-","-","-"]
[6,19632737,"SNP","C","A","splice_acceptor_variant","Vradi06g09360","uncharacterized protein LOC111240721 isoform X1","-","-","-","-"]
[6,19634762,"INDEL","TG","T","frameshift_variant","Vradi06g09360","uncharacterized protein LOC111240721 isoform X1","-","-","-","-"]
[6,19757606,"INDEL","ATTGCAGTAGCAGAGACGAAGGCAGACACGGTGTTTTTGCGTCACGAGGCGGGAGCGTTAAGGCAGAG","A","frameshift_variant","Vradi06g09400","Vesicle transport protein","protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]"]
[6,19757713,"SNP","G","A","stop_gained","Vradi06g09400","Vesicle transport protein","protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]"]
[6,19824269,"SNP","G","T","stop_gained","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19824404,"SNP","C","T","stop_gained","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19824753,"INDEL","AG","A","frameshift_variant","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19824835,"INDEL","GA","G","frameshift_variant","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19825053,"INDEL","ATGCCGAC","A","frameshift_variant","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19825903,"SNP","C","G","stop_gained","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19826562,"SNP","T","C","splice_donor_variant","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19826772,"SNP","A","T","splice_acceptor_variant","Vradi06g09410","glutamate synthase [NADH], amyloplastic isoform X1","glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]","-","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]","3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; iron ion binding [GO:0005506]; glutamine metabolic process [GO:0006541]; L-glutamate biosynthetic process [GO:0097054]"]
[6,19857918,"INDEL","ACTGT","A","frameshift_variant","Vradi06g09420","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein kinase activity [GO:0004672]"]
[6,19874184,"SNP","T","A","stop_gained","Vradi06g09440","-","-","-","-","-"]
[6,19997260,"INDEL","T","TGC","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997261,"INDEL","TTC","T","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997381,"INDEL","TCCGGTTGTCCCATATCATTTCGC","T","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997461,"INDEL","TCG","T","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997465,"INDEL","A","AG","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997468,"INDEL","GGAGCC","G","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997476,"INDEL","TCACTTGG","T","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997495,"SNP","T","A","stop_gained","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997611,"INDEL","CTT","C","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997708,"INDEL","GT","G","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997725,"INDEL","GCT","G","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997728,"INDEL","G","GTATT","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,19997733,"INDEL","G","GA","frameshift_variant","Vradi06g09470","uncharacterized protein LOC111242130","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,20032970,"INDEL","T","TG","frameshift_variant","Vradi06g09480","-","-","-","-","-"]
[6,20032973,"INDEL","G","GATTTCAA","frameshift_variant","Vradi06g09480","-","-","-","-","-"]
[6,20032976,"INDEL","GAA","G","frameshift_variant","Vradi06g09480","-","-","-","-","-"]
[6,20060072,"INDEL","TCG","T","frameshift_variant","Vradi06g09490","uncharacterized protein LOC106763551","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,20093348,"INDEL","TG","T","frameshift_variant","Vradi06g09500","uncharacterized protein LOC106779094","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,20222082,"SNP","G","A","start_lost","Vradi06g09540","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[6,20222127,"INDEL","TCGTA","T","frameshift_variant","Vradi06g09540","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[6,20222133,"INDEL","GGAGT","G","frameshift_variant","Vradi06g09540","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[6,20222363,"INDEL","CA","C","frameshift_variant","Vradi06g09540","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[6,20222525,"SNP","G","A","splice_donor_variant","Vradi06g09540","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[6,20249596,"INDEL","GAGAGTGAGTCTATATAGAACCTCACCGCTCGGTTTAGGACA","G","splice_acceptor_variant","Vradi06g09560","-","-","-","-","-"]
[6,20897373,"INDEL","G","GT","frameshift_variant","Vradi06g09700","COP1-interacting protein 7","-","-","-","-"]
[6,21148758,"INDEL","CTGGT","C","frameshift_variant","Vradi06g09770","Purple acid phosphatase (EC 3.1.3.2)","-","-","acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]","acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]"]
[6,21179160,"SNP","C","T","splice_donor_variant","Vradi06g09780","uncharacterized protein LOC111241861","-","-","-","-"]
[6,21179172,"SNP","G","A","stop_gained","Vradi06g09780","uncharacterized protein LOC111241861","-","-","-","-"]
[6,21180586,"SNP","*","C","frameshift_variant","Vradi06g09780","uncharacterized protein LOC111241861","-","-","-","-"]
[6,21180806,"INDEL","ACCTAAAGG","A","frameshift_variant","Vradi06g09780","uncharacterized protein LOC111241861","-","-","-","-"]
[6,21180816,"INDEL","TCTTCATCAAGTCCTCCAACACCTTCTTCATC","T","frameshift_variant","Vradi06g09780","uncharacterized protein LOC111241861","-","-","-","-"]
[6,21181012,"SNP","G","A","stop_gained","Vradi06g09780","uncharacterized protein LOC111241861","-","-","-","-"]
[6,21244495,"SNP","C","T","stop_gained","Vradi06g09810","-","-","-","-","-"]
[6,21244496,"INDEL","G","GATTT","frameshift_variant","Vradi06g09810","-","-","-","-","-"]
[6,21245022,"INDEL","A","AG","splice_acceptor_variant","Vradi06g09810","-","-","-","-","-"]
[6,21245023,"SNP","A","C","splice_acceptor_variant","Vradi06g09810","-","-","-","-","-"]
[6,21245215,"SNP","G","A","splice_acceptor_variant","Vradi06g09810","-","-","-","-","-"]
[6,21547921,"SNP","C","T","stop_gained","Vradi06g09860","-","-","-","-","-"]
[6,21548472,"INDEL","T","TCGTA","frameshift_variant&stop_gained","Vradi06g09860","-","-","-","-","-"]
[6,21787692,"SNP","C","T","stop_gained","Vradi06g09980","-","-","-","-","-"]
[6,21788069,"INDEL","A","AAAATTCACTACAAAAT","frameshift_variant","Vradi06g09980","-","-","-","-","-"]
[6,21855964,"INDEL","A","AT","frameshift_variant","Vradi06g10000","microtubule-associated protein RP/EB family member 1-like","-","-","-","-"]
[6,21856246,"INDEL","T","TC","frameshift_variant","Vradi06g10000","microtubule-associated protein RP/EB family member 1-like","-","-","-","-"]
[6,21921618,"INDEL","C","CA","frameshift_variant","Vradi06g10030","uncharacterized protein LOC106776699","-","-","-","-"]
[6,22104939,"INDEL","T","TC","frameshift_variant","Vradi06g10070","uncharacterized protein LOC106764583 isoform X2","-","-","-","-"]
[6,22293495,"INDEL","G","GC","frameshift_variant","Vradi06g10130","-","-","-","-","-"]
[6,22342676,"INDEL","CG","C","frameshift_variant","Vradi06g10150","-","-","-","-","-"]
[6,22342709,"SNP","C","A","stop_gained","Vradi06g10150","-","-","-","-","-"]
[6,22453681,"INDEL","T","TTATGCTTTCAACTATTACA","frameshift_variant","Vradi06g10210","helicase and polymerase-containing protein TEBICHI isoform X2","DNA-dependent DNA replication [GO:0006261]","-","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; helicase activity [GO:0004386]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; helicase activity [GO:0004386]; DNA-dependent DNA replication [GO:0006261]"]
[6,22509626,"INDEL","TTCACTGTTATC","T","frameshift_variant","Vradi06g10230","probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,22509639,"INDEL","ACACCTTCACTCAATAAGATGATT","A","frameshift_variant","Vradi06g10230","probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[6,22708615,"SNP","C","T","stop_gained","Vradi06g10260","uncharacterized protein LOC106773081","-","-","-","-"]
[6,23026488,"INDEL","TC","T","frameshift_variant","Vradi06g10320","universal stress protein A-like protein isoform X1","-","-","-","-"]
[6,23195121,"SNP","G","A","splice_acceptor_variant","Vradi06g10350","-","-","-","-","-"]
[6,23195312,"INDEL","CA","C","frameshift_variant","Vradi06g10350","-","-","-","-","-"]
[6,23195369,"SNP","C","T","stop_gained","Vradi06g10350","-","-","-","-","-"]
[6,23195381,"SNP","G","C","splice_donor_variant","Vradi06g10350","-","-","-","-","-"]
[6,23195660,"SNP","G","A","stop_gained","Vradi06g10350","-","-","-","-","-"]
[6,23196571,"SNP","A","G","splice_acceptor_variant","Vradi06g10350","-","-","-","-","-"]
[6,23196790,"SNP","G","T","splice_acceptor_variant","Vradi06g10350","-","-","-","-","-"]
[6,23207322,"SNP","G","A","stop_gained","Vradi06g10360","-","-","-","-","-"]
[6,23208572,"SNP","G","T","splice_acceptor_variant","Vradi06g10360","-","-","-","-","-"]
[6,23364190,"SNP","C","A","stop_gained","Vradi06g10400","-","-","-","-","-"]
[6,23364461,"INDEL","C","CACAACGAATTATTCTCTAAATACCAAAACACATTGTTAATACTAGCTAGATTAAACAGAAGCTGAATAATGTACCTCAAGTAACAAAAGTAAA","stop_gained","Vradi06g10400","-","-","-","-","-"]
[6,23366083,"INDEL","A","ACCTTG","splice_donor_variant","Vradi06g10400","-","-","-","-","-"]
[6,23710510,"SNP","G","A","stop_gained","Vradi06g10470","-","-","-","-","-"]
[6,24256130,"SNP","C","T","stop_gained","Vradi06g10540","-","-","-","-","-"]
[6,24256227,"SNP","G","A","splice_acceptor_variant","Vradi06g10540","-","-","-","-","-"]
[6,24256247,"INDEL","C","CA","frameshift_variant","Vradi06g10540","-","-","-","-","-"]
[6,24884373,"INDEL","AC","A","frameshift_variant","Vradi06g10640","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]"]
[6,24884531,"INDEL","AC","A","frameshift_variant","Vradi06g10640","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]"]
[6,24884669,"INDEL","AT","A","frameshift_variant","Vradi06g10640","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]"]
[6,25333006,"SNP","C","T","stop_gained","Vradi06g10800","long chain acyl-CoA synthetase 9, chloroplastic isoform X1","-","-","-","-"]
[6,25333526,"INDEL","TC","T","frameshift_variant","Vradi06g10800","long chain acyl-CoA synthetase 9, chloroplastic isoform X1","-","-","-","-"]
[6,25796847,"INDEL","CA","C","frameshift_variant","Vradi06g10940","probable LRR receptor-like serine/threonine-protein kinase At1g05700","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,25796868,"SNP","T","A","splice_acceptor_variant","Vradi06g10940","probable LRR receptor-like serine/threonine-protein kinase At1g05700","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,25796994,"SNP","G","A","stop_gained","Vradi06g10940","probable LRR receptor-like serine/threonine-protein kinase At1g05700","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,26059270,"INDEL","CAAA","CA","frameshift_variant","Vradi06g11020","DIS3-like exonuclease 2 (EC 3.1.13.-)","nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' [GO:0034427]; polyuridylation-dependent mRNA catabolic process [GO:1990074]","P-body [GO:0000932]","3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; RNA binding [GO:0003723]","P-body [GO:0000932]; 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; RNA binding [GO:0003723]; nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' [GO:0034427]; polyuridylation-dependent mRNA catabolic process [GO:1990074]"]
[6,26380162,"INDEL","G","GTA","frameshift_variant&stop_gained","Vradi06g11100","oxysterol-binding protein-related protein 1C isoform X3","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[6,26621884,"SNP","G","A","stop_gained","Vradi06g11150","probable WRKY transcription factor 61","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[6,27398226,"SNP","T","C","splice_acceptor_variant","Vradi06g11370","NAD kinase 2, chloroplastic isoform X2","NADP biosynthetic process [GO:0006741]","-","NAD+ kinase activity [GO:0003951]","NAD+ kinase activity [GO:0003951]; NADP biosynthetic process [GO:0006741]"]
[6,27416537,"SNP","A","C","splice_acceptor_variant","Vradi06g11380","-","-","-","-","-"]
[6,27417216,"INDEL","CACCG","C","frameshift_variant","Vradi06g11380","-","-","-","-","-"]
[6,27521176,"SNP","C","T","stop_gained","Vradi06g11440","-","-","-","-","-"]
[6,27522296,"SNP","G","A","stop_gained","Vradi06g11440","-","-","-","-","-"]
[6,27522343,"INDEL","GTT","G","frameshift_variant","Vradi06g11440","-","-","-","-","-"]
[6,27522352,"SNP","G","T","stop_gained","Vradi06g11440","-","-","-","-","-"]
[6,27522361,"SNP","C","T","stop_gained","Vradi06g11440","-","-","-","-","-"]
[6,27522363,"SNP","C","T","stop_gained","Vradi06g11440","-","-","-","-","-"]
[6,27522381,"INDEL","AG","A","frameshift_variant","Vradi06g11440","-","-","-","-","-"]
[6,27522383,"INDEL","CCTA","C","splice_acceptor_variant","Vradi06g11440","-","-","-","-","-"]
[6,27526243,"INDEL","CAA","C","frameshift_variant","Vradi06g11440","-","-","-","-","-"]
[6,27526248,"INDEL","TC","T","frameshift_variant","Vradi06g11440","-","-","-","-","-"]
[6,27527591,"SNP","A","C","splice_donor_variant","Vradi06g11440","-","-","-","-","-"]
[6,27542156,"INDEL","AT","A","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542320,"SNP","T","A","stop_gained","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542329,"INDEL","GGT","G","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542332,"INDEL","CA","C","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542452,"INDEL","AC","A","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542454,"INDEL","AAAAAC","A","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542465,"SNP","G","C","stop_gained","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542470,"INDEL","A","ACC","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542486,"INDEL","CAGAA","C","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542492,"INDEL","TCCACCGAAGGG","T","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542515,"INDEL","CTA","C","frameshift_variant","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27542655,"SNP","A","T","stop_gained","Vradi06g11450","uncharacterized protein LOC106763649","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,27613363,"INDEL","CA","C","frameshift_variant","Vradi06g11460","-","-","-","-","-"]
[6,27613366,"SNP","*","T","frameshift_variant","Vradi06g11460","-","-","-","-","-"]
[6,27613610,"INDEL","GTAC","GGTTAC","frameshift_variant&stop_gained","Vradi06g11460","-","-","-","-","-"]
[6,27796964,"INDEL","AAATGAGAATGAGTTT","A","frameshift_variant&splice_acceptor_variant","Vradi06g11500","alcohol dehydrogenase 1","-","-","oxidoreductase activity [GO:0016491]; zinc ion binding [GO:0008270]","oxidoreductase activity [GO:0016491]; zinc ion binding [GO:0008270]"]
[6,27835355,"SNP","G","T","start_lost","Vradi06g11520","uncharacterized protein LOC106765049 isoform X3","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[6,27853264,"INDEL","TC","T","frameshift_variant","Vradi06g11530","tetratricopeptide repeat protein 33 isoform X1","-","-","-","-"]
[6,28017753,"SNP","T","C","splice_acceptor_variant","Vradi06g11600","ACT domain-containing protein ACR3","-","-","-","-"]
[6,28031742,"INDEL","A","AC","frameshift_variant","Vradi06g11610","-","-","-","-","-"]
[6,28031746,"INDEL","TG","T","frameshift_variant","Vradi06g11610","-","-","-","-","-"]
[6,28031766,"INDEL","AT","A","frameshift_variant","Vradi06g11610","-","-","-","-","-"]
[6,28032499,"SNP","A","G","splice_acceptor_variant","Vradi06g11610","-","-","-","-","-"]
[6,28072330,"SNP","C","T","stop_gained","Vradi06g11650","-","-","-","-","-"]
[6,28102504,"INDEL","ATGTCAC","A","frameshift_variant&splice_acceptor_variant","Vradi06g11660","chaperone protein dnaJ 10","-","-","-","-"]
[6,28139386,"INDEL","GGGCTCAACGAATGACT","G","frameshift_variant","Vradi06g11690","transcription factor MYB52-like","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[6,28139392,"INDEL","ACG","A","frameshift_variant","Vradi06g11690","transcription factor MYB52-like","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[6,28211186,"INDEL","C","CAT","frameshift_variant&stop_gained","Vradi06g11720","-","-","-","-","-"]
[6,28211188,"SNP","*","T","frameshift_variant","Vradi06g11720","-","-","-","-","-"]
[6,28405416,"SNP","G","A","stop_gained","Vradi06g11820","stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]; fatty acid biosynthetic process [GO:0006633]"]
[6,28405424,"INDEL","T","TC","frameshift_variant","Vradi06g11820","stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]; fatty acid biosynthetic process [GO:0006633]"]
[6,28406226,"INDEL","CGTCGAGG","C","frameshift_variant","Vradi06g11820","stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]; fatty acid biosynthetic process [GO:0006633]"]
[6,28406521,"INDEL","TGGCGGGGACACTGACAGAACAGATTTGGGTGGCAGGCTGC","T","frameshift_variant","Vradi06g11820","stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; metal ion binding [GO:0046872]; fatty acid biosynthetic process [GO:0006633]"]
[6,28447196,"INDEL","G","GC","frameshift_variant","Vradi06g11830","stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic-like","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; fatty acid biosynthetic process [GO:0006633]"]
[6,28447265,"INDEL","G","GGTGGCGGGGAC","frameshift_variant","Vradi06g11830","stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic-like","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; fatty acid biosynthetic process [GO:0006633]"]
[6,28447266,"SNP","*","G","frameshift_variant","Vradi06g11830","stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic-like","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; fatty acid biosynthetic process [GO:0006633]"]
[6,28447278,"INDEL","T","TTGAGAGGACACATTTCGGTGGCACCATGC","frameshift_variant","Vradi06g11830","stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic-like","fatty acid biosynthetic process [GO:0006633]","-","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]","acyl-[acyl-carrier-protein] desaturase activity [GO:0045300]; fatty acid biosynthetic process [GO:0006633]"]
[6,28473705,"INDEL","AGCGCATCCAGTAGTCTT","A","frameshift_variant","Vradi06g11840","receptor-like serine/threonine-protein kinase ALE2 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,28473785,"SNP","C","T","splice_acceptor_variant","Vradi06g11840","receptor-like serine/threonine-protein kinase ALE2 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,28474095,"SNP","C","T","splice_acceptor_variant","Vradi06g11840","receptor-like serine/threonine-protein kinase ALE2 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,28660646,"SNP","G","A","stop_gained","Vradi06g11870","lachrymatory-factor synthase-like isoform X2","abscisic acid-activated signaling pathway [GO:0009738]","cytoplasm [GO:0005737]; plasma membrane [GO:0005886]","protein phosphatase inhibitor activity [GO:0004864]","cytoplasm [GO:0005737]; plasma membrane [GO:0005886]; protein phosphatase inhibitor activity [GO:0004864]; abscisic acid-activated signaling pathway [GO:0009738]"]
[6,28660882,"INDEL","AAG","A","frameshift_variant","Vradi06g11870","lachrymatory-factor synthase-like isoform X2","abscisic acid-activated signaling pathway [GO:0009738]","cytoplasm [GO:0005737]; plasma membrane [GO:0005886]","protein phosphatase inhibitor activity [GO:0004864]","cytoplasm [GO:0005737]; plasma membrane [GO:0005886]; protein phosphatase inhibitor activity [GO:0004864]; abscisic acid-activated signaling pathway [GO:0009738]"]
[6,28661344,"INDEL","GGT","G","frameshift_variant","Vradi06g11870","lachrymatory-factor synthase-like isoform X2","abscisic acid-activated signaling pathway [GO:0009738]","cytoplasm [GO:0005737]; plasma membrane [GO:0005886]","protein phosphatase inhibitor activity [GO:0004864]","cytoplasm [GO:0005737]; plasma membrane [GO:0005886]; protein phosphatase inhibitor activity [GO:0004864]; abscisic acid-activated signaling pathway [GO:0009738]"]
[6,28705558,"INDEL","TACTAAACATTACCA","T","frameshift_variant&splice_donor_variant","Vradi06g11890","-","-","-","-","-"]
[6,28712766,"INDEL","TTG","T","frameshift_variant","Vradi06g11890","-","-","-","-","-"]
[6,28714813,"SNP","C","T","stop_gained","Vradi06g11900","-","-","-","-","-"]
[6,28715026,"SNP","C","T","stop_gained","Vradi06g11900","-","-","-","-","-"]
[6,28960066,"INDEL","AC","A","frameshift_variant","Vradi06g12010","Bidirectional sugar transporter SWEET","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; carbohydrate transport [GO:0008643]"]
[6,28962017,"INDEL","C","CT","frameshift_variant","Vradi06g12010","Bidirectional sugar transporter SWEET","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; carbohydrate transport [GO:0008643]"]
[6,29112659,"INDEL","CTT","C","frameshift_variant","Vradi06g12020","-","-","-","-","-"]
[6,29120394,"SNP","C","A","stop_gained","Vradi06g12030","transcription factor MYB3R-1","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[6,29163207,"SNP","A","G","splice_donor_variant","Vradi06g12040","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[6,29163915,"SNP","G","T","splice_donor_variant","Vradi06g12040","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[6,29590314,"SNP","C","T","splice_donor_variant","Vradi06g12210","pentatricopeptide repeat-containing protein At5g10690","-","-","-","-"]
[6,29590383,"INDEL","CAT","C","splice_acceptor_variant","Vradi06g12210","pentatricopeptide repeat-containing protein At5g10690","-","-","-","-"]
[6,29590451,"INDEL","AG","A","frameshift_variant","Vradi06g12210","pentatricopeptide repeat-containing protein At5g10690","-","-","-","-"]
[6,29590466,"SNP","C","T","splice_donor_variant","Vradi06g12210","pentatricopeptide repeat-containing protein At5g10690","-","-","-","-"]
[6,29629656,"INDEL","AG","A","frameshift_variant","Vradi06g12220","probable E3 ubiquitin-protein ligase RHG1A isoform X2","-","-","-","-"]
[6,29747455,"INDEL","GAAACAAAA","G","frameshift_variant","Vradi06g12270","cytoplasmic 60S subunit biogenesis factor REI1 homolog 1","-","cytoplasm [GO:0005737]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","cytoplasm [GO:0005737]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[6,29777136,"INDEL","A","AG","frameshift_variant","Vradi06g12290","uncharacterized protein LOC106779061 (uncharacterized protein LOC106779062)","-","-","-","-"]
[6,29927976,"INDEL","C","CCT","frameshift_variant","Vradi06g12360","putative RNA methyltransferase At5g10620 isoform X2","methylation [GO:0032259]; rRNA processing [GO:0006364]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]; rRNA processing [GO:0006364]"]
[6,30066989,"SNP","T","C","splice_acceptor_variant","Vradi06g12430","uncharacterized protein LOC106763836","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,30245005,"SNP","G","A","splice_donor_variant","Vradi06g12550","uncharacterized protein LOC106764580 isoform X1","protein secretion [GO:0009306]","integral component of plasma membrane [GO:0005887]","-","integral component of plasma membrane [GO:0005887]; protein secretion [GO:0009306]"]
[6,30334994,"SNP","T","A","splice_donor_variant","Vradi06g12570","E3 ubiquitin-protein ligase At1g63170 isoform X1","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[6,30351503,"INDEL","G","GA","frameshift_variant","Vradi06g12580","Serine/threonine protein phosphatase 2A regulatory subunit","signal transduction [GO:0007165]","protein phosphatase type 2A complex [GO:0000159]","protein phosphatase regulator activity [GO:0019888]","protein phosphatase type 2A complex [GO:0000159]; protein phosphatase regulator activity [GO:0019888]; signal transduction [GO:0007165]"]
[6,30353444,"SNP","C","A","splice_acceptor_variant","Vradi06g12590","B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-","cell cycle [GO:0007049]; cell division [GO:0051301]"]
[6,30453084,"SNP","C","T","splice_acceptor_variant","Vradi06g12630","-","-","-","-","-"]
[6,30458234,"INDEL","A","AGTCT","frameshift_variant","Vradi06g12630","-","-","-","-","-"]
[6,30484225,"SNP","T","G","stop_gained","Vradi06g12640","-","-","-","-","-"]
[6,30484260,"INDEL","T","TTA","frameshift_variant","Vradi06g12640","-","-","-","-","-"]
[6,30484263,"INDEL","AGG","A","frameshift_variant","Vradi06g12640","-","-","-","-","-"]
[6,30602718,"INDEL","G","GTTAGATTTGTTCGGT","splice_donor_variant","Vradi06g12680","LOW QUALITY PROTEIN: V-type proton ATPase subunit c''2","-","integral component of membrane [GO:0016021]; proton-transporting V-type ATPase, V0 domain [GO:0033179]","proton transmembrane transporter activity [GO:0015078]","integral component of membrane [GO:0016021]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; proton transmembrane transporter activity [GO:0015078]"]
[6,30642092,"SNP","C","T","splice_donor_variant","Vradi06g12710","carbon catabolite repressor protein 4 homolog 6","-","-","-","-"]
[6,30938765,"INDEL","C","CA","frameshift_variant","Vradi06g12820","DEAD-box ATP-dependent RNA helicase 56","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[6,30960092,"INDEL","T","TC","frameshift_variant","Vradi06g12830","ethylene-responsive transcription factor SHINE 2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[6,30960093,"INDEL","G","GGTCGACTCAGTCGACTC","frameshift_variant","Vradi06g12830","ethylene-responsive transcription factor SHINE 2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[6,31137950,"SNP","G","T","stop_gained","Vradi06g12910","uncharacterized protein LOC111240514","-","-","polysaccharide binding [GO:0030247]","polysaccharide binding [GO:0030247]"]
[6,31190571,"INDEL","CT","C","frameshift_variant","Vradi06g12920","calcium uptake protein, mitochondrial","mitochondrial calcium ion transmembrane transport [GO:0006851]","-","calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]; mitochondrial calcium ion transmembrane transport [GO:0006851]"]
[6,31217601,"SNP","G","A","stop_gained","Vradi06g12940","protein MEMO1","-","-","-","-"]
[6,31217842,"INDEL","AATCT","A","frameshift_variant","Vradi06g12940","protein MEMO1","-","-","-","-"]
[6,31218338,"INDEL","TGG","T","frameshift_variant","Vradi06g12940","protein MEMO1","-","-","-","-"]
[6,31218353,"INDEL","CTCCGAGCTCCA","C","frameshift_variant","Vradi06g12940","protein MEMO1","-","-","-","-"]
[6,31321819,"SNP","G","A","stop_gained","Vradi06g12980","-","-","-","-","-"]
[6,32096956,"INDEL","TAAAGCTTCGAG","T","frameshift_variant&stop_lost","Vradi06g13350","deSI-like protein At4g17486","-","-","peptidase activity [GO:0008233]","peptidase activity [GO:0008233]"]
[6,32194967,"SNP","T","G","stop_gained","Vradi06g13380","Aspartate aminotransferase (EC 2.6.1.1)","biosynthetic process [GO:0009058]; cellular amino acid metabolic process [GO:0006520]","-","L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]","L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]; biosynthetic process [GO:0009058]; cellular amino acid metabolic process [GO:0006520]"]
[6,32211338,"INDEL","TG","T","frameshift_variant","Vradi06g13400","-","-","-","-","-"]
[6,32211366,"INDEL","CAATATGAATCAAAA","C","frameshift_variant","Vradi06g13400","-","-","-","-","-"]
[6,32211522,"INDEL","C","CACACTCATCCACTTTGGCTACAACCTGATGTGTTTGTCCTTCAATTTGTTTCGTG","frameshift_variant&stop_gained","Vradi06g13400","-","-","-","-","-"]
[6,32262046,"INDEL","CA","C","frameshift_variant","Vradi06g13440","uncharacterized protein LOC106764634 isoform X3","methylation [GO:0032259]","-","metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]","metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,32262413,"SNP","C","A","splice_acceptor_variant","Vradi06g13440","uncharacterized protein LOC106764634 isoform X3","methylation [GO:0032259]","-","metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]","metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,32297932,"INDEL","G","GAT","frameshift_variant","Vradi06g13450","-","-","-","-","-"]
[6,32790054,"SNP","*","G","frameshift_variant","Vradi06g13590","early nodulin-like protein 3","-","integral component of membrane [GO:0016021]","electron transfer activity [GO:0009055]","integral component of membrane [GO:0016021]; electron transfer activity [GO:0009055]"]
[6,32790062,"INDEL","*","TGGCTGGCGTG","frameshift_variant","Vradi06g13590","early nodulin-like protein 3","-","integral component of membrane [GO:0016021]","electron transfer activity [GO:0009055]","integral component of membrane [GO:0016021]; electron transfer activity [GO:0009055]"]
[6,32790084,"SNP","*","T","frameshift_variant","Vradi06g13590","early nodulin-like protein 3","-","integral component of membrane [GO:0016021]","electron transfer activity [GO:0009055]","integral component of membrane [GO:0016021]; electron transfer activity [GO:0009055]"]
[6,32790092,"SNP","*","T","frameshift_variant","Vradi06g13590","early nodulin-like protein 3","-","integral component of membrane [GO:0016021]","electron transfer activity [GO:0009055]","integral component of membrane [GO:0016021]; electron transfer activity [GO:0009055]"]
[6,32790098,"SNP","*","C","frameshift_variant","Vradi06g13590","early nodulin-like protein 3","-","integral component of membrane [GO:0016021]","electron transfer activity [GO:0009055]","integral component of membrane [GO:0016021]; electron transfer activity [GO:0009055]"]
[6,32790110,"SNP","*","A","frameshift_variant","Vradi06g13590","early nodulin-like protein 3","-","integral component of membrane [GO:0016021]","electron transfer activity [GO:0009055]","integral component of membrane [GO:0016021]; electron transfer activity [GO:0009055]"]
[6,33041595,"INDEL","G","GTT","frameshift_variant","Vradi06g13760","uncharacterized protein LOC106770583","-","-","-","-"]
[6,33041597,"INDEL","G","GGTTTT","frameshift_variant","Vradi06g13760","uncharacterized protein LOC106770583","-","-","-","-"]
[6,33041686,"SNP","C","T","stop_gained","Vradi06g13760","uncharacterized protein LOC106770583","-","-","-","-"]
[6,33041994,"SNP","T","C","start_lost","Vradi06g13760","uncharacterized protein LOC106770583","-","-","-","-"]
[6,33045197,"INDEL","G","GTGCCCAATATAATGGCATT","frameshift_variant","Vradi06g13770","pentatricopeptide repeat-containing protein At3g29230-like","-","-","-","-"]
[6,33193285,"INDEL","CG","C","frameshift_variant","Vradi06g13820","uncharacterized protein LOC106766239","-","-","-","-"]
[6,33275293,"SNP","G","T","stop_gained","Vradi06g13860","myosin-15 isoform X1","actin filament organization [GO:0007015]","myosin complex [GO:0016459]","actin binding [GO:0003779]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]","myosin complex [GO:0016459]; actin binding [GO:0003779]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]; actin filament organization [GO:0007015]"]
[6,33275758,"SNP","G","A","splice_donor_variant","Vradi06g13860","myosin-15 isoform X1","actin filament organization [GO:0007015]","myosin complex [GO:0016459]","actin binding [GO:0003779]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]","myosin complex [GO:0016459]; actin binding [GO:0003779]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]; actin filament organization [GO:0007015]"]
[6,33276752,"SNP","C","T","stop_gained","Vradi06g13860","myosin-15 isoform X1","actin filament organization [GO:0007015]","myosin complex [GO:0016459]","actin binding [GO:0003779]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]","myosin complex [GO:0016459]; actin binding [GO:0003779]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]; actin filament organization [GO:0007015]"]
[6,33322542,"SNP","G","T","splice_donor_variant","Vradi06g13900","uncharacterized protein LOC106765272 isoform X2","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,33421037,"INDEL","GTA","G","frameshift_variant","Vradi06g13980","beta-fructofuranosidase, insoluble isoenzyme CWINV6-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[6,33421040,"INDEL","C","CGT","frameshift_variant","Vradi06g13980","beta-fructofuranosidase, insoluble isoenzyme CWINV6-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]"]
[6,33627259,"SNP","A","G","splice_acceptor_variant","Vradi06g14090","protein REVERSION-TO-ETHYLENE SENSITIVITY1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,33652812,"INDEL","GTA","G","splice_donor_variant","Vradi06g14120","Histone deacetylase (EC 3.5.1.98)","-","-","NAD-dependent histone deacetylase activity (H3-K14 specific) [GO:0032041]","NAD-dependent histone deacetylase activity (H3-K14 specific) [GO:0032041]"]
[6,33720823,"SNP","G","A","splice_donor_variant","Vradi06g14150","-","-","-","-","-"]
[6,33786928,"INDEL","A","AT","frameshift_variant","Vradi06g14220","37S ribosomal protein rsm18, mitochondrial","translation [GO:0006412]","ribosome [GO:0005840]","RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[6,33877259,"INDEL","TC","T","frameshift_variant","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33877292,"SNP","C","T","stop_gained","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33877805,"SNP","G","A","splice_donor_variant","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33878328,"SNP","G","A","stop_gained","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33878535,"INDEL","A","AGG","frameshift_variant","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33879145,"SNP","G","A","stop_gained","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33879185,"INDEL","AGCCTC","A","frameshift_variant","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33886804,"SNP","A","G","splice_acceptor_variant","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,33886880,"INDEL","T","TCA","frameshift_variant","Vradi06g14300","RNA pseudouridine synthase 3, mitochondrial isoform X2","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[6,34354774,"SNP","G","A","stop_gained","Vradi06g14530","Peptidylprolyl isomerase (EC 5.2.1.8)","-","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]"]
[6,34448585,"INDEL","GGGAGAA","G","start_lost","Vradi06g14630","uncharacterized protein LOC111241895","-","-","-","-"]
[6,34508584,"INDEL","TGCTGAGTTGGCTGA","T","frameshift_variant","Vradi06g14670","U-box domain-containing protein 4-like","-","-","-","-"]
[6,34643268,"INDEL","TCAG","T","splice_acceptor_variant","Vradi06g14750","transcription initiation factor TFIID subunit 4b isoform X3","DNA-templated transcription, initiation [GO:0006352]","transcription factor TFIID complex [GO:0005669]","translation initiation factor activity [GO:0003743]","transcription factor TFIID complex [GO:0005669]; translation initiation factor activity [GO:0003743]; DNA-templated transcription, initiation [GO:0006352]"]
[6,34653060,"INDEL","G","GTCACT","frameshift_variant","Vradi06g14750","transcription initiation factor TFIID subunit 4b isoform X3","DNA-templated transcription, initiation [GO:0006352]","transcription factor TFIID complex [GO:0005669]","translation initiation factor activity [GO:0003743]","transcription factor TFIID complex [GO:0005669]; translation initiation factor activity [GO:0003743]; DNA-templated transcription, initiation [GO:0006352]"]
[6,34654065,"INDEL","AGAGGATGACAAGAT","A","frameshift_variant","Vradi06g14750","transcription initiation factor TFIID subunit 4b isoform X3","DNA-templated transcription, initiation [GO:0006352]","transcription factor TFIID complex [GO:0005669]","translation initiation factor activity [GO:0003743]","transcription factor TFIID complex [GO:0005669]; translation initiation factor activity [GO:0003743]; DNA-templated transcription, initiation [GO:0006352]"]
[6,34657719,"SNP","A","G","splice_acceptor_variant","Vradi06g14760","uncharacterized protein LOC106765213","-","-","fatty-acyl-CoA binding [GO:0000062]; lipid binding [GO:0008289]","fatty-acyl-CoA binding [GO:0000062]; lipid binding [GO:0008289]"]
[6,34658333,"SNP","G","A","splice_acceptor_variant","Vradi06g14760","uncharacterized protein LOC106765213","-","-","fatty-acyl-CoA binding [GO:0000062]; lipid binding [GO:0008289]","fatty-acyl-CoA binding [GO:0000062]; lipid binding [GO:0008289]"]
[6,34854703,"SNP","C","A","stop_gained","Vradi06g14890","protein DCL homolog, chloroplastic","-","-","-","-"]
[6,34893567,"INDEL","GA","G","frameshift_variant","Vradi06g14910","Mannose-P-dolichol utilization defect 1 protein homolog","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[6,35156691,"INDEL","G","GGA","frameshift_variant","Vradi06g15080","protein MAIN-LIKE 1-like","-","-","-","-"]
[6,35156693,"INDEL","CAT","C","frameshift_variant","Vradi06g15080","protein MAIN-LIKE 1-like","-","-","-","-"]
[6,35156871,"SNP","G","A","splice_acceptor_variant","Vradi06g15080","protein MAIN-LIKE 1-like","-","-","-","-"]
[6,35156952,"INDEL","G","GC","frameshift_variant","Vradi06g15080","protein MAIN-LIKE 1-like","-","-","-","-"]
[6,35158739,"INDEL","G","GTGATACGC","frameshift_variant&stop_gained","Vradi06g15080","protein MAIN-LIKE 1-like","-","-","-","-"]
[6,35275745,"INDEL","GTA","G","frameshift_variant","Vradi06g15180","peroxisomal multifunctional enzyme type 2","-","-","-","-"]
[6,35289406,"SNP","G","A","splice_donor_variant","Vradi06g15200","Hexosyltransferase (EC 2.4.1.-)","plant-type secondary cell wall biogenesis [GO:0009834]; xylan biosynthetic process [GO:0045492]","Golgi apparatus [GO:0005794]","glucuronosyltransferase activity [GO:0015020]","Golgi apparatus [GO:0005794]; glucuronosyltransferase activity [GO:0015020]; plant-type secondary cell wall biogenesis [GO:0009834]; xylan biosynthetic process [GO:0045492]"]
[6,35333450,"INDEL","C","CTAAA","frameshift_variant&stop_lost","Vradi06g15230","phosphatidate phosphatase PAH2 isoform X6","-","-","-","-"]
[6,35336730,"SNP","T","C","splice_donor_variant","Vradi06g15230","phosphatidate phosphatase PAH2 isoform X6","-","-","-","-"]
[6,35396478,"SNP","T","A","splice_acceptor_variant","Vradi06g15330","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[6,35412507,"INDEL","G","GTA","splice_donor_variant","Vradi06g15350","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[6,35698574,"INDEL","ACACGGTTGAACTGCATAGATATCCGAGACTCCAGGT","A","frameshift_variant&splice_donor_variant","Vradi06g15550","-","-","-","-","-"]
[6,35698671,"SNP","C","A","stop_gained","Vradi06g15550","-","-","-","-","-"]
[6,35704076,"INDEL","CTCCTTCCAATAATAACAAGAACATAACAAAA","C","frameshift_variant","Vradi06g15550","-","-","-","-","-"]
[6,35704594,"INDEL","CTACG","C","frameshift_variant","Vradi06g15550","-","-","-","-","-"]
[6,35705210,"INDEL","A","AGAATTCAGATGCTCTCCTGACAAAAG","frameshift_variant","Vradi06g15550","-","-","-","-","-"]
[6,35720978,"INDEL","C","CCA","frameshift_variant","Vradi06g15570","30S ribosomal protein S9, chloroplastic","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[6,35725304,"SNP","A","G","start_lost","Vradi06g15580","-","-","-","-","-"]
[6,35802052,"INDEL","CATTGTTG","C","frameshift_variant&start_lost","Vradi06g15630","Hexosyltransferase (EC 2.4.1.-)","-","-","transferase activity, transferring glycosyl groups [GO:0016757]","transferase activity, transferring glycosyl groups [GO:0016757]"]
[6,35824961,"SNP","A","G","splice_donor_variant","Vradi06g15650","pathogenesis-related protein 5-like","-","-","-","-"]
[6,35939688,"SNP","C","T","splice_acceptor_variant","Vradi06g15760","outer envelope pore protein 24, chloroplastic","regulation of ion transmembrane transport [GO:0034765]","chloroplast outer membrane [GO:0009707]; etioplast membrane [GO:0034426]; pore complex [GO:0046930]","porin activity [GO:0015288]; voltage-gated cation channel activity [GO:0022843]","chloroplast outer membrane [GO:0009707]; etioplast membrane [GO:0034426]; pore complex [GO:0046930]; porin activity [GO:0015288]; voltage-gated cation channel activity [GO:0022843]; regulation of ion transmembrane transport [GO:0034765]"]
[6,36036622,"INDEL","G","GC","frameshift_variant","Vradi06g15830","101 kDa malaria antigen","-","-","-","-"]
[6,36044188,"INDEL","AC","A","frameshift_variant","Vradi06g15840","tRNA 4-demethylwyosine synthase (AdoMet-dependent) (EC 4.1.3.44)","methylation [GO:0032259]; tRNA processing [GO:0008033]","integral component of membrane [GO:0016021]","4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; tRNA-4-demethylwyosine synthase activity [GO:0102521]","integral component of membrane [GO:0016021]; 4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; tRNA-4-demethylwyosine synthase activity [GO:0102521]; methylation [GO:0032259]; tRNA processing [GO:0008033]"]
[6,36044419,"INDEL","TCCCC","T","frameshift_variant","Vradi06g15840","tRNA 4-demethylwyosine synthase (AdoMet-dependent) (EC 4.1.3.44)","methylation [GO:0032259]; tRNA processing [GO:0008033]","integral component of membrane [GO:0016021]","4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; tRNA-4-demethylwyosine synthase activity [GO:0102521]","integral component of membrane [GO:0016021]; 4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; tRNA-4-demethylwyosine synthase activity [GO:0102521]; methylation [GO:0032259]; tRNA processing [GO:0008033]"]
[6,36045279,"INDEL","T","TC","frameshift_variant","Vradi06g15840","tRNA 4-demethylwyosine synthase (AdoMet-dependent) (EC 4.1.3.44)","methylation [GO:0032259]; tRNA processing [GO:0008033]","integral component of membrane [GO:0016021]","4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; tRNA-4-demethylwyosine synthase activity [GO:0102521]","integral component of membrane [GO:0016021]; 4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; tRNA-4-demethylwyosine synthase activity [GO:0102521]; methylation [GO:0032259]; tRNA processing [GO:0008033]"]
[6,36112869,"INDEL","G","GTA","splice_donor_variant","Vradi06g15920","putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial","-","-","-","-"]
[6,36137993,"SNP","G","A","stop_gained","Vradi06g15940","F-box protein PP2-B10","-","-","-","-"]
[6,36162322,"INDEL","CGCCAAATACT","C","frameshift_variant&stop_lost","Vradi06g15960","uncharacterized protein LOC106764266","-","-","-","-"]
[6,36193991,"INDEL","TTG","T","frameshift_variant","Vradi06g16000","-","-","-","-","-"]
[6,36193995,"INDEL","CTTCTCTACG","C","stop_gained","Vradi06g16000","-","-","-","-","-"]
[6,36254167,"INDEL","C","CAAAA","frameshift_variant","Vradi06g16040","zinc finger protein VAR3, chloroplastic-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[6,36254349,"SNP","G","A","stop_gained","Vradi06g16040","zinc finger protein VAR3, chloroplastic-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[6,36365434,"INDEL","CA","C","frameshift_variant","Vradi06g16090","exocyst complex component SEC3A-like isoform X1","exocytosis [GO:0006887]","exocyst [GO:0000145]","-","exocyst [GO:0000145]; exocytosis [GO:0006887]"]
[6,36384884,"INDEL","T","TCGTA","frameshift_variant&stop_gained","Vradi06g16100","-","-","-","-","-"]
[6,36391723,"INDEL","G","GAT","frameshift_variant","Vradi06g16110","Peroxidase (EC 1.11.1.7)","response to oxidative stress [GO:0006979]","-","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; response to oxidative stress [GO:0006979]"]
[6,36398309,"INDEL","TG","T","frameshift_variant","Vradi06g16120","galactokinase-like isoform X3","galactose metabolic process [GO:0006012]","cytoplasm [GO:0005737]","ATP binding [GO:0005524]; galactokinase activity [GO:0004335]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; galactokinase activity [GO:0004335]; galactose metabolic process [GO:0006012]"]
[6,36411483,"INDEL","CCT","C","frameshift_variant","Vradi06g16130","probable anion transporter 5","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[6,36411484,"INDEL","CT","C","frameshift_variant","Vradi06g16130","probable anion transporter 5","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[6,36411693,"SNP","A","G","start_lost","Vradi06g16130","probable anion transporter 5","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[6,36580847,"INDEL","C","CATCCATG","frameshift_variant&stop_gained","Vradi06g16210","probable serine/threonine-protein kinase PBL21","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[6,36613283,"INDEL","C","CT","frameshift_variant","Vradi06g16260","large proline-rich protein BAG6 isoform X1","-","-","-","-"]
[6,36622975,"INDEL","A","AACATGTTCTTTCTGAGTATCGTATCCTTCAAATTGCATTTTTTTT","splice_donor_variant","Vradi06g16260","large proline-rich protein BAG6 isoform X1","-","-","-","-"]
[6,36665898,"SNP","C","T","stop_gained","Vradi06g16310","Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)","carbohydrate metabolic process [GO:0005975]","-","alpha-amylase activity [GO:0004556]; alpha-amylase activity (releasing maltohexaose) [GO:0103025]; calcium ion binding [GO:0005509]","alpha-amylase activity [GO:0004556]; alpha-amylase activity (releasing maltohexaose) [GO:0103025]; calcium ion binding [GO:0005509]; carbohydrate metabolic process [GO:0005975]"]
[6,36667558,"SNP","T","A","stop_gained","Vradi06g16310","Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)","carbohydrate metabolic process [GO:0005975]","-","alpha-amylase activity [GO:0004556]; alpha-amylase activity (releasing maltohexaose) [GO:0103025]; calcium ion binding [GO:0005509]","alpha-amylase activity [GO:0004556]; alpha-amylase activity (releasing maltohexaose) [GO:0103025]; calcium ion binding [GO:0005509]; carbohydrate metabolic process [GO:0005975]"]
[6,36672487,"SNP","A","C","stop_lost","Vradi06g16330","tocopherol O-methyltransferase, chloroplastic","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[6,36683435,"INDEL","C","CA","frameshift_variant","Vradi06g16350","RNA polymerase II transcription factor B subunit 2","nucleotide-excision repair [GO:0006289]","transcription factor TFIIH core complex [GO:0000439]","ATPase activator activity [GO:0001671]","transcription factor TFIIH core complex [GO:0000439]; ATPase activator activity [GO:0001671]; nucleotide-excision repair [GO:0006289]"]
[6,36804243,"INDEL","TG","T","frameshift_variant","Vradi06g16440","-","-","-","-","-"]
[6,36804379,"SNP","C","T","stop_gained","Vradi06g16440","-","-","-","-","-"]
[6,36804516,"INDEL","GA","G","frameshift_variant","Vradi06g16440","-","-","-","-","-"]
[6,36807168,"SNP","T","C","stop_lost","Vradi06g16450","-","-","-","-","-"]
[6,36807193,"INDEL","T","TG","frameshift_variant","Vradi06g16450","-","-","-","-","-"]
[6,36807278,"INDEL","CACCAGCTCTTCCCCAAATGG","C","frameshift_variant","Vradi06g16450","-","-","-","-","-"]
[6,36807301,"INDEL","CCTCTCTGGGATCCCTGTG","C","frameshift_variant&splice_acceptor_variant","Vradi06g16450","-","-","-","-","-"]
[6,36933914,"INDEL","A","AT","frameshift_variant","Vradi06g16610","Phosphotransferase (EC 2.7.1.-)","cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]","-","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]; cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]"]
[6,36935125,"SNP","C","T","splice_donor_variant","Vradi06g16610","Phosphotransferase (EC 2.7.1.-)","cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]","-","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]; cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]"]
[6,36935968,"INDEL","A","ACTTG","frameshift_variant","Vradi06g16610","Phosphotransferase (EC 2.7.1.-)","cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]","-","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]; cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]"]
[6,37009764,"INDEL","CG","C","frameshift_variant","Vradi06g16700","filament-like plant protein 4 isoform X1","-","-","-","-"]
[6,37010064,"SNP","G","A","stop_gained","Vradi06g16700","filament-like plant protein 4 isoform X1","-","-","-","-"]
[6,37010289,"SNP","G","A","stop_gained","Vradi06g16700","filament-like plant protein 4 isoform X1","-","-","-","-"]
[6,37049229,"INDEL","TATCAAGAAACATAACAG","T","frameshift_variant&start_lost","Vradi06g16710","-","-","-","-","-"]
[6,37161249,"INDEL","T","TTTCAAG","splice_donor_variant","Vradi06g16770","uncharacterized protein LOC106765057","-","-","DNA-binding transcription factor activity [GO:0003700]","DNA-binding transcription factor activity [GO:0003700]"]
[6,37204823,"INDEL","C","CTCTGCTTAAAACCTTATTCCTCTCT","frameshift_variant","Vradi06g16810","probable 1-acylglycerol-3-phosphate O-acyltransferase","-","-","transferase activity, transferring acyl groups [GO:0016746]","transferase activity, transferring acyl groups [GO:0016746]"]
[6,37287916,"INDEL","AC","A","frameshift_variant","Vradi06g16860","-","-","-","-","-"]
[6,37297931,"INDEL","AAC","A","frameshift_variant","Vradi06g16870","Elongator complex protein 3 (EC 2.3.1.-)","-","-","4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; N-acetyltransferase activity [GO:0008080]; tRNA binding [GO:0000049]; tRNA uridine(34) acetyltransferase activity [GO:0106261]","4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; N-acetyltransferase activity [GO:0008080]; tRNA binding [GO:0000049]; tRNA uridine(34) acetyltransferase activity [GO:0106261]"]
[6,37331213,"SNP","C","T","stop_gained","Vradi06g16920","Beta-galactosidase (EC 3.2.1.23)","carbohydrate metabolic process [GO:0005975]","apoplast [GO:0048046]","beta-galactosidase activity [GO:0004565]","apoplast [GO:0048046]; beta-galactosidase activity [GO:0004565]; carbohydrate metabolic process [GO:0005975]"]
[7,213532,"SNP","G","T","stop_gained","Vradi07g00060","putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial","-","-","-","-"]
[7,213634,"INDEL","G","GT","frameshift_variant","Vradi07g00060","putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial","-","-","-","-"]
[7,336197,"SNP","C","T","stop_gained","Vradi07g00110","AT-hook motif nuclear-localized protein 17-like","-","-","minor groove of adenine-thymine-rich DNA binding [GO:0003680]","minor groove of adenine-thymine-rich DNA binding [GO:0003680]"]
[7,599410,"INDEL","A","ATC","frameshift_variant","Vradi07g00140","-","-","-","-","-"]
[7,604061,"INDEL","GTA","G","splice_donor_variant","Vradi07g00140","-","-","-","-","-"]
[7,630581,"INDEL","T","TAGAGTCACCCACCACTA","frameshift_variant","Vradi07g00150","calcium-dependent protein kinase 17-like","-","-","ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; protein kinase activity [GO:0004672]"]
[7,662213,"INDEL","AATAAACATTAAGTCTTATACT","A","frameshift_variant&stop_lost","Vradi07g00160","-","-","-","-","-"]
[7,715747,"SNP","C","T","splice_acceptor_variant","Vradi07g00200","vesicle transport protein GOT1","vesicle-mediated transport [GO:0016192]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; vesicle-mediated transport [GO:0016192]"]
[7,1030602,"INDEL","AGC","AC","frameshift_variant","Vradi07g00370","uncharacterized protein LOC106770161","-","-","-","-"]
[7,1030633,"SNP","G","A","splice_donor_variant","Vradi07g00370","uncharacterized protein LOC106770161","-","-","-","-"]
[7,1030708,"SNP","G","A","splice_acceptor_variant","Vradi07g00370","uncharacterized protein LOC106770161","-","-","-","-"]
[7,1030717,"SNP","G","A","stop_gained","Vradi07g00370","uncharacterized protein LOC106770161","-","-","-","-"]
[7,1030743,"SNP","G","T","stop_gained","Vradi07g00370","uncharacterized protein LOC106770161","-","-","-","-"]
[7,1097071,"INDEL","GT","G","frameshift_variant","Vradi07g00410","polyol transporter 5 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[7,1133027,"INDEL","AT","A","frameshift_variant","Vradi07g00450","sulfite exporter TauE/SafE family protein 3-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,1133170,"INDEL","GA","G","frameshift_variant","Vradi07g00450","sulfite exporter TauE/SafE family protein 3-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,1134191,"SNP","G","A","stop_gained","tRNA-Glu","-","-","-","-","-"]
[7,1682871,"INDEL","T","TG","frameshift_variant","Vradi07g00770","thioredoxin domain-containing protein PLP3A isoform X1","-","-","-","-"]
[7,2372206,"SNP","G","A","stop_gained","Vradi07g01270","Mediator of RNA polymerase II transcription subunit 4 (Mediator complex subunit 4)","regulation of transcription by RNA polymerase II [GO:0006357]","mediator complex [GO:0016592]","transcription coregulator activity [GO:0003712]","mediator complex [GO:0016592]; transcription coregulator activity [GO:0003712]; regulation of transcription by RNA polymerase II [GO:0006357]"]
[7,2880180,"INDEL","GC","G","frameshift_variant","Vradi07g01720","uncharacterized protein LOC106778385","-","-","-","-"]
[7,2977852,"SNP","C","T","splice_acceptor_variant","Vradi07g01820","Phosphoserine aminotransferase (EC 2.6.1.52)","L-serine biosynthetic process [GO:0006564]","-","O-phospho-L-serine:2-oxoglutarate aminotransferase activity [GO:0004648]","O-phospho-L-serine:2-oxoglutarate aminotransferase activity [GO:0004648]; L-serine biosynthetic process [GO:0006564]"]
[7,3136856,"INDEL","CAACCCTAGTGTTTTGCGAGATG","C","start_lost","Vradi07g01870","-","-","-","-","-"]
[7,3139871,"INDEL","G","GGCTTGTGTGCAGCATT","frameshift_variant","Vradi07g01870","-","-","-","-","-"]
[7,3170857,"INDEL","C","CCTCA","frameshift_variant&stop_gained","Vradi07g01880","probable serine/threonine-protein kinase PBL18","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,3213746,"INDEL","AGT","A","frameshift_variant","Vradi07g01910","HMG1/2-like protein","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[7,3344429,"INDEL","A","ACT","frameshift_variant","Vradi07g01970","-","-","-","-","-"]
[7,3370694,"INDEL","A","AGG","frameshift_variant","Vradi07g01980","-","-","-","-","-"]
[7,3370701,"INDEL","C","CGCCGACAGCCATAACGGCT","frameshift_variant","Vradi07g01980","-","-","-","-","-"]
[7,3370705,"INDEL","*","GACAGCC","frameshift_variant","Vradi07g01980","-","-","-","-","-"]
[7,3404489,"INDEL","ACTTATGTCATTGTGAGC","A","frameshift_variant","Vradi07g01990","serine/threonine-protein kinase/endoribonuclease IRE1b-like","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[7,3839065,"INDEL","TAGAA","T","frameshift_variant","Vradi07g02220","SUPPRESSOR OF ABI3-5 isoform X1","-","nucleus [GO:0005634]","metal ion binding [GO:0046872]; RNA binding [GO:0003723]","nucleus [GO:0005634]; metal ion binding [GO:0046872]; RNA binding [GO:0003723]"]
[7,3839070,"INDEL","TC","T","frameshift_variant","Vradi07g02220","SUPPRESSOR OF ABI3-5 isoform X1","-","nucleus [GO:0005634]","metal ion binding [GO:0046872]; RNA binding [GO:0003723]","nucleus [GO:0005634]; metal ion binding [GO:0046872]; RNA binding [GO:0003723]"]
[7,5058753,"SNP","C","T","splice_acceptor_variant","Vradi07g02950","uncharacterized protein LOC106765972","-","-","metal ion binding [GO:0046872]; N-acetyltransferase activity [GO:0008080]","metal ion binding [GO:0046872]; N-acetyltransferase activity [GO:0008080]"]
[7,5226783,"INDEL","T","TC","frameshift_variant&stop_lost","Vradi07g03020","-","-","-","-","-"]
[7,5262221,"SNP","C","T","stop_gained","Vradi07g03060","putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial","-","-","-","-"]
[7,5308199,"SNP","A","C","splice_acceptor_variant","Vradi07g03080","-","-","-","-","-"]
[7,5308487,"INDEL","AAG","A","frameshift_variant","Vradi07g03080","-","-","-","-","-"]
[7,5308492,"INDEL","T","TTG","frameshift_variant","Vradi07g03080","-","-","-","-","-"]
[7,5413521,"SNP","T","G","stop_lost","Vradi07g03120","-","-","-","-","-"]
[7,5494267,"SNP","T","A","stop_gained","Vradi07g03180","uncharacterized protein LOC106767634","-","-","-","-"]
[7,5580281,"SNP","G","A","stop_gained","Vradi07g03250","-","-","-","-","-"]
[7,5580355,"SNP","C","T","stop_gained","Vradi07g03250","-","-","-","-","-"]
[7,5762349,"SNP","G","A","stop_gained","Vradi07g03310","-","-","-","-","-"]
[7,5762380,"SNP","C","T","splice_acceptor_variant","Vradi07g03310","-","-","-","-","-"]
[7,5769115,"INDEL","CA","C","frameshift_variant","Vradi07g03310","-","-","-","-","-"]
[7,5769121,"INDEL","GA","G","frameshift_variant","Vradi07g03310","-","-","-","-","-"]
[7,5769127,"INDEL","A","ACTGTT","frameshift_variant","Vradi07g03310","-","-","-","-","-"]
[7,5769362,"INDEL","G","GAT","frameshift_variant","Vradi07g03310","-","-","-","-","-"]
[7,5769364,"INDEL","GGC","G","frameshift_variant","Vradi07g03310","-","-","-","-","-"]
[7,5850535,"SNP","C","T","splice_donor_variant","Vradi07g03360","DNA-directed DNA polymerase (EC 2.7.7.7)","DNA-dependent DNA replication [GO:0006261]","-","DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]","DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; DNA-dependent DNA replication [GO:0006261]"]
[7,5996519,"INDEL","TA","T","frameshift_variant","Vradi07g03430","Aminoacyl-tRNA hydrolase (EC 3.1.1.29)","-","-","aminoacyl-tRNA hydrolase activity [GO:0004045]","aminoacyl-tRNA hydrolase activity [GO:0004045]"]
[7,6186892,"INDEL","AG","A","frameshift_variant","Vradi07g03510","protein FAM133B","-","-","-","-"]
[7,6186963,"SNP","T","C","splice_donor_variant","Vradi07g03510","protein FAM133B","-","-","-","-"]
[7,6187137,"SNP","C","T","stop_gained","Vradi07g03510","protein FAM133B","-","-","-","-"]
[7,6249205,"SNP","A","G","start_lost","Vradi07g03570","phospholipase A1-Igamma3, chloroplastic-like","lipid metabolic process [GO:0006629]","-","-","lipid metabolic process [GO:0006629]"]
[7,6311668,"INDEL","CTCCTAGT","C","frameshift_variant","Vradi07g03610","uncharacterized protein LOC111241940","-","-","-","-"]
[7,6311694,"INDEL","GAAGTTCTCTCA","G","frameshift_variant","Vradi07g03610","uncharacterized protein LOC111241940","-","-","-","-"]
[7,6584308,"INDEL","G","GTAATT","splice_donor_variant","Vradi07g03730","protein CHUP1, chloroplastic","-","-","-","-"]
[7,6729584,"INDEL","G","GTA","splice_donor_variant","Vradi07g03810","Beta-galactosidase (EC 3.2.1.23)","carbohydrate metabolic process [GO:0005975]","apoplast [GO:0048046]","beta-galactosidase activity [GO:0004565]; carbohydrate binding [GO:0030246]","apoplast [GO:0048046]; beta-galactosidase activity [GO:0004565]; carbohydrate binding [GO:0030246]; carbohydrate metabolic process [GO:0005975]"]
[7,6751316,"INDEL","AC","A","frameshift_variant","Vradi07g03820","methyltransferase-like protein 13 isoform X2","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[7,7221063,"SNP","G","A","splice_acceptor_variant","Vradi07g03990","ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1","positive regulation of transcription, DNA-templated [GO:0045893]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; positive regulation of transcription, DNA-templated [GO:0045893]"]
[7,7300836,"SNP","C","T","stop_gained","Vradi07g04050","PI-PLC X domain-containing protein At5g67130 isoform X2","lipid metabolic process [GO:0006629]","-","phosphoric diester hydrolase activity [GO:0008081]","phosphoric diester hydrolase activity [GO:0008081]; lipid metabolic process [GO:0006629]"]
[7,7300872,"SNP","A","G","splice_donor_variant","Vradi07g04050","PI-PLC X domain-containing protein At5g67130 isoform X2","lipid metabolic process [GO:0006629]","-","phosphoric diester hydrolase activity [GO:0008081]","phosphoric diester hydrolase activity [GO:0008081]; lipid metabolic process [GO:0006629]"]
[7,7462763,"SNP","C","T","stop_gained","Vradi07g04110","uncharacterized protein At4g06744","-","-","-","-"]
[7,7462802,"INDEL","TACCTCACTTTCGCCAACAACAACCTCAC","T","frameshift_variant","Vradi07g04110","uncharacterized protein At4g06744","-","-","-","-"]
[7,7463069,"INDEL","TG","T","frameshift_variant","Vradi07g04110","uncharacterized protein At4g06744","-","-","-","-"]
[7,7463215,"SNP","G","A","splice_donor_variant","Vradi07g04110","uncharacterized protein At4g06744","-","-","-","-"]
[7,7467952,"INDEL","ATTAGTTTTGTGGT","A","splice_acceptor_variant","Vradi07g04110","uncharacterized protein At4g06744","-","-","-","-"]
[7,7505174,"INDEL","TC","T","frameshift_variant","Vradi07g04120","protein IRX15-LIKE","xylan biosynthetic process [GO:0045492]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; xylan biosynthetic process [GO:0045492]"]
[7,7573929,"INDEL","A","AG","frameshift_variant","Vradi07g04160","-","-","-","-","-"]
[7,7628843,"INDEL","TG","T","frameshift_variant","Vradi07g04210","transcription factor MYB3 isoform X1","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[7,7747358,"INDEL","TCGGAGGTTGTGGAGAGGAAGAGGGG","T","frameshift_variant","Vradi07g04250","-","-","-","-","-"]
[7,8293762,"INDEL","AT","A","frameshift_variant","Vradi07g04450","probable sulfate transporter 3.3","-","integral component of membrane [GO:0016021]","secondary active sulfate transmembrane transporter activity [GO:0008271]","integral component of membrane [GO:0016021]; secondary active sulfate transmembrane transporter activity [GO:0008271]"]
[7,8300007,"SNP","G","A","stop_gained","Vradi07g04450","probable sulfate transporter 3.3","-","integral component of membrane [GO:0016021]","secondary active sulfate transmembrane transporter activity [GO:0008271]","integral component of membrane [GO:0016021]; secondary active sulfate transmembrane transporter activity [GO:0008271]"]
[7,8300042,"INDEL","ACAAGGT","A","frameshift_variant&splice_donor_variant","Vradi07g04460","-","-","-","-","-"]
[7,8300394,"INDEL","AC","A","frameshift_variant","Vradi07g04450","probable sulfate transporter 3.3","-","integral component of membrane [GO:0016021]","secondary active sulfate transmembrane transporter activity [GO:0008271]","integral component of membrane [GO:0016021]; secondary active sulfate transmembrane transporter activity [GO:0008271]"]
[7,8400355,"INDEL","ATT","A","frameshift_variant","Vradi07g04500","WUSCHEL-related homeobox 6","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[7,8400358,"INDEL","AGTAAGGGCATGTTTGGATAAC","A","splice_donor_variant","Vradi07g04500","WUSCHEL-related homeobox 6","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[7,8674019,"INDEL","GT","G","frameshift_variant","Vradi07g04600","cytochrome P450 89A2-like","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","integral component of membrane [GO:0016021]; heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[7,8796878,"SNP","A","C","stop_gained","Vradi07g04650","-","-","-","-","-"]
[7,8798056,"SNP","C","T","stop_gained","Vradi07g04650","-","-","-","-","-"]
[7,8810970,"SNP","T","G","splice_donor_variant","Vradi07g04660","probable arabinosyltransferase ARAD1 isoform X4","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]","transferase activity, transferring glycosyl groups [GO:0016757]","Golgi membrane [GO:0000139]; transferase activity, transferring glycosyl groups [GO:0016757]; protein glycosylation [GO:0006486]"]
[7,8833300,"SNP","C","T","stop_gained","Vradi07g04680","DNA-directed RNA polymerases II, IV and V subunit 3","transcription, DNA-templated [GO:0006351]","-","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]; protein dimerization activity [GO:0046983]","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]; protein dimerization activity [GO:0046983]; transcription, DNA-templated [GO:0006351]"]
[7,8958524,"SNP","C","T","stop_gained","Vradi07g04730","GPI mannosyltransferase 2 (EC 2.4.1.-)","GPI anchor biosynthetic process [GO:0006506]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","alpha-1,6-mannosyltransferase activity [GO:0000009]; glycolipid mannosyltransferase activity [GO:0004376]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; alpha-1,6-mannosyltransferase activity [GO:0000009]; glycolipid mannosyltransferase activity [GO:0004376]; GPI anchor biosynthetic process [GO:0006506]"]
[7,9098848,"SNP","G","T","stop_gained","Vradi07g04780","cytochrome c6, chloroplastic","-","-","electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]","electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]"]
[7,9104631,"SNP","T","C","start_lost","Vradi07g04780","cytochrome c6, chloroplastic","-","-","electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]","electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]"]
[7,9171113,"INDEL","A","ATCAAAATC","frameshift_variant","Vradi07g04830","exocyst complex component EXO84C","exocytosis [GO:0006887]","exocyst [GO:0000145]","-","exocyst [GO:0000145]; exocytosis [GO:0006887]"]
[7,9355932,"INDEL","AAC","A","frameshift_variant","Vradi07g04930","-","-","-","-","-"]
[7,9355936,"INDEL","C","CAT","frameshift_variant","Vradi07g04930","-","-","-","-","-"]
[7,9718150,"SNP","C","T","stop_gained","Vradi07g05090","-","-","-","-","-"]
[7,11320207,"SNP","G","A","stop_gained","Vradi07g05350","hydroxyproline O-galactosyltransferase GALT6 isoform X2","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","carbohydrate binding [GO:0030246]; transferase activity, transferring hexosyl groups [GO:0016758]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; carbohydrate binding [GO:0030246]; transferase activity, transferring hexosyl groups [GO:0016758]; protein glycosylation [GO:0006486]"]
[7,11703559,"SNP","C","T","stop_gained","Vradi07g05510","-","-","-","-","-"]
[7,11703706,"SNP","C","T","stop_gained","Vradi07g05510","-","-","-","-","-"]
[7,12051878,"INDEL","TA","T","frameshift_variant","Vradi07g05680","probable WRKY transcription factor 72","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[7,12051891,"SNP","G","T","stop_gained","Vradi07g05680","probable WRKY transcription factor 72","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[7,12052141,"SNP","G","A","stop_gained","Vradi07g05680","probable WRKY transcription factor 72","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[7,12614369,"INDEL","TCG","T","frameshift_variant","Vradi07g05790","-","-","-","-","-"]
[7,12614372,"INDEL","T","TTC","frameshift_variant","Vradi07g05790","-","-","-","-","-"]
[7,12614799,"INDEL","AT","A","frameshift_variant","Vradi07g05790","-","-","-","-","-"]
[7,12717971,"SNP","G","A","stop_gained","Vradi07g05820","-","-","-","-","-"]
[7,12718502,"SNP","A","C","splice_acceptor_variant","Vradi07g05820","-","-","-","-","-"]
[7,12797674,"SNP","T","A","start_lost","Vradi07g05840","-","-","-","-","-"]
[7,12902497,"SNP","C","G","splice_acceptor_variant","Vradi07g05850","uncharacterized protein LOC106772423 isoform X2","-","-","-","-"]
[7,12902675,"SNP","G","T","stop_gained","Vradi07g05850","uncharacterized protein LOC106772423 isoform X2","-","-","-","-"]
[7,12902679,"SNP","T","A","stop_gained","Vradi07g05850","uncharacterized protein LOC106772423 isoform X2","-","-","-","-"]
[7,12902764,"SNP","G","C","stop_gained","Vradi07g05850","uncharacterized protein LOC106772423 isoform X2","-","-","-","-"]
[7,12905209,"SNP","G","A","stop_gained","Vradi07g05850","uncharacterized protein LOC106772423 isoform X2","-","-","-","-"]
[7,12905326,"SNP","C","A","stop_gained","Vradi07g05850","uncharacterized protein LOC106772423 isoform X2","-","-","-","-"]
[7,13070485,"SNP","C","T","stop_gained","Vradi07g05890","-","-","-","-","-"]
[7,13070517,"SNP","C","A","splice_acceptor_variant","Vradi07g05890","-","-","-","-","-"]
[7,13134532,"SNP","A","G","stop_lost","Vradi07g05920","-","-","-","-","-"]
[7,13134589,"SNP","C","A","stop_gained","Vradi07g05920","-","-","-","-","-"]
[7,13226627,"SNP","C","T","stop_gained","Vradi07g05970","-","-","-","-","-"]
[7,13285831,"INDEL","TG","T","frameshift_variant","Vradi07g05990","-","-","-","-","-"]
[7,13741710,"SNP","A","T","stop_gained","Vradi07g06200","putative UPF0051 protein ABCI9","iron-sulfur cluster assembly [GO:0016226]","-","-","iron-sulfur cluster assembly [GO:0016226]"]
[7,13742191,"INDEL","CA","C","frameshift_variant","Vradi07g06200","putative UPF0051 protein ABCI9","iron-sulfur cluster assembly [GO:0016226]","-","-","iron-sulfur cluster assembly [GO:0016226]"]
[7,13742494,"SNP","C","A","splice_donor_variant","Vradi07g06200","putative UPF0051 protein ABCI9","iron-sulfur cluster assembly [GO:0016226]","-","-","iron-sulfur cluster assembly [GO:0016226]"]
[7,13742554,"SNP","A","T","stop_gained","Vradi07g06200","putative UPF0051 protein ABCI9","iron-sulfur cluster assembly [GO:0016226]","-","-","iron-sulfur cluster assembly [GO:0016226]"]
[7,13800905,"INDEL","TA","T","frameshift_variant","Vradi07g06220","-","-","-","-","-"]
[7,13801003,"SNP","C","T","splice_acceptor_variant","Vradi07g06220","-","-","-","-","-"]
[7,13802759,"INDEL","A","AT","frameshift_variant","Vradi07g06220","-","-","-","-","-"]
[7,13823276,"INDEL","TG","T","frameshift_variant","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13823500,"SNP","G","A","splice_acceptor_variant","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13823520,"INDEL","TACAATGTACAATG","T","frameshift_variant","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13823577,"SNP","G","A","stop_gained","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13823625,"SNP","G","A","stop_gained","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13823877,"SNP","T","A","stop_gained","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13823884,"SNP","G","A","splice_donor_variant","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13823976,"SNP","G","T","splice_acceptor_variant","Vradi07g06230","zinc finger CCCH domain-containing protein 48-like","-","-","-","-"]
[7,13981237,"INDEL","CAGGGAGGTCCTATAATTATGTCACAGGCA","C","frameshift_variant","Vradi07g06260","calcium-transporting ATPase 5, plasma membrane-type isoform X2","-","-","-","-"]
[7,13982727,"SNP","G","A","splice_acceptor_variant","Vradi07g06260","calcium-transporting ATPase 5, plasma membrane-type isoform X2","-","-","-","-"]
[7,13982779,"SNP","C","T","stop_gained","Vradi07g06260","calcium-transporting ATPase 5, plasma membrane-type isoform X2","-","-","-","-"]
[7,13982893,"INDEL","TTC","T","frameshift_variant","Vradi07g06260","calcium-transporting ATPase 5, plasma membrane-type isoform X2","-","-","-","-"]
[7,14103924,"SNP","G","T","start_lost","Vradi07g06280","-","-","-","-","-"]
[7,14443704,"INDEL","T","TC","frameshift_variant","Vradi07g06340","-","-","-","-","-"]
[7,14550677,"SNP","G","A","stop_gained","Vradi07g06360","-","-","-","-","-"]
[7,14550854,"INDEL","AAT","A","frameshift_variant","Vradi07g06360","-","-","-","-","-"]
[7,14551657,"INDEL","GCTAGTGTAGCATTGCC","G","frameshift_variant","Vradi07g06360","-","-","-","-","-"]
[7,14551849,"SNP","C","T","stop_gained","Vradi07g06360","-","-","-","-","-"]
[7,14551968,"INDEL","AT","A","frameshift_variant","Vradi07g06360","-","-","-","-","-"]
[7,14602367,"INDEL","AGTGT","A","frameshift_variant","Vradi07g06380","phosphate transporter PHO1 homolog 3-like","phosphate ion transport [GO:0006817]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; phosphate ion transport [GO:0006817]"]
[7,14603032,"SNP","G","A","stop_gained","Vradi07g06380","phosphate transporter PHO1 homolog 3-like","phosphate ion transport [GO:0006817]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; phosphate ion transport [GO:0006817]"]
[7,14603706,"SNP","C","T","splice_donor_variant","Vradi07g06380","phosphate transporter PHO1 homolog 3-like","phosphate ion transport [GO:0006817]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; phosphate ion transport [GO:0006817]"]
[7,14603756,"SNP","C","T","splice_acceptor_variant","Vradi07g06380","phosphate transporter PHO1 homolog 3-like","phosphate ion transport [GO:0006817]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; phosphate ion transport [GO:0006817]"]
[7,14604210,"SNP","C","T","splice_acceptor_variant","Vradi07g06380","phosphate transporter PHO1 homolog 3-like","phosphate ion transport [GO:0006817]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; phosphate ion transport [GO:0006817]"]
[7,14656950,"INDEL","A","AAT","frameshift_variant","Vradi07g06410","O-fucosyltransferase family protein","fucose metabolic process [GO:0006004]","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]; fucose metabolic process [GO:0006004]"]
[7,14678363,"INDEL","AGAGGAAGAGCTTGGATTGGTGGGCTTCTCTTGAT","A","frameshift_variant","Vradi07g06420","-","-","-","-","-"]
[7,14720709,"INDEL","AAGGGAAAGAATACTTGAATCTT","A","splice_donor_variant","Vradi07g06450","-","-","-","-","-"]
[7,14741906,"INDEL","A","AC","frameshift_variant","Vradi07g06460","geraniol 8-hydroxylase-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[7,14747645,"SNP","G","A","stop_gained","Vradi07g06460","geraniol 8-hydroxylase-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[7,14890569,"INDEL","C","CAT","frameshift_variant","Vradi07g06550","uncharacterized protein LOC106766689","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,15001871,"SNP","G","A","splice_acceptor_variant","Vradi07g06570","uncharacterized protein LOC106767702 isoform X2","-","-","-","-"]
[7,15056175,"SNP","C","T","stop_gained","Vradi07g06610","protein ALP1-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,15056287,"INDEL","TG","T","frameshift_variant","Vradi07g06610","protein ALP1-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,15056289,"SNP","A","T","stop_gained","Vradi07g06610","protein ALP1-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,15056521,"INDEL","C","CA","frameshift_variant","Vradi07g06610","protein ALP1-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,15155892,"INDEL","ATC","ATCTAATGAGGATGAACATGGTC","frameshift_variant","Vradi07g06660","probable WRKY transcription factor 3 isoform X3","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[7,15156136,"INDEL","AC","A","frameshift_variant","Vradi07g06660","probable WRKY transcription factor 3 isoform X3","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[7,15156138,"INDEL","AAC","A","frameshift_variant","Vradi07g06660","probable WRKY transcription factor 3 isoform X3","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[7,15156176,"SNP","G","A","stop_gained","Vradi07g06660","probable WRKY transcription factor 3 isoform X3","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[7,15427182,"SNP","G","A","splice_acceptor_variant","Vradi07g06820","-","-","-","-","-"]
[7,15431115,"INDEL","GA","GAA","frameshift_variant","Vradi07g06830","-","-","-","-","-"]
[7,15793242,"SNP","T","A","splice_acceptor_variant","Vradi07g06940","-","-","-","-","-"]
[7,15861641,"INDEL","ACGGAGAAGCAGAG","A","frameshift_variant","Vradi07g06960","metalloendoproteinase 2-MMP","-","extracellular matrix [GO:0031012]","metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","extracellular matrix [GO:0031012]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,15861656,"SNP","C","G","stop_gained","Vradi07g06960","metalloendoproteinase 2-MMP","-","extracellular matrix [GO:0031012]","metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","extracellular matrix [GO:0031012]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,15876492,"INDEL","AGCACT","A","frameshift_variant","Vradi07g06970","-","-","-","-","-"]
[7,15876509,"INDEL","TCA","T","frameshift_variant","Vradi07g06970","-","-","-","-","-"]
[7,15876514,"INDEL","T","TGC","frameshift_variant","Vradi07g06970","-","-","-","-","-"]
[7,15876572,"INDEL","ACT","A","frameshift_variant","Vradi07g06970","-","-","-","-","-"]
[7,16180784,"SNP","C","A","stop_gained","Vradi07g07080","-","-","-","-","-"]
[7,16231422,"SNP","G","C","splice_acceptor_variant","Vradi07g07120","-","-","-","-","-"]
[7,16583594,"INDEL","T","TCC","frameshift_variant","Vradi07g07270","probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,16583595,"INDEL","T","TC","frameshift_variant","Vradi07g07270","probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,16583602,"SNP","G","A","stop_gained","Vradi07g07270","probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,17266265,"INDEL","CAATG","C","frameshift_variant","Vradi07g07540","zinc finger protein ZAT3","-","-","electron transfer activity [GO:0009055]","electron transfer activity [GO:0009055]"]
[7,17288185,"SNP","C","A","splice_donor_variant","Vradi07g07570","uncharacterized membrane protein At3g27390","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,17290631,"SNP","T","C","splice_donor_variant","Vradi07g07570","uncharacterized membrane protein At3g27390","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,18054137,"SNP","G","A","splice_donor_variant","Vradi07g07650","protein spt2","-","-","-","-"]
[7,18117789,"INDEL","C","CA","frameshift_variant","Vradi07g07670","probable mannitol dehydrogenase","-","-","oxidoreductase activity [GO:0016491]; zinc ion binding [GO:0008270]","oxidoreductase activity [GO:0016491]; zinc ion binding [GO:0008270]"]
[7,18325427,"INDEL","AGAAAATTTGG","A","frameshift_variant","Vradi07g07720","-","-","-","-","-"]
[7,18326316,"SNP","T","C","splice_acceptor_variant","Vradi07g07720","-","-","-","-","-"]
[7,18923966,"SNP","G","A","stop_gained","Vradi07g07790","WUSCHEL-related homeobox 9-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[7,18924138,"INDEL","TGC","T","frameshift_variant","Vradi07g07790","WUSCHEL-related homeobox 9-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[7,18924346,"INDEL","CA","C","frameshift_variant","Vradi07g07790","WUSCHEL-related homeobox 9-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[7,19680900,"SNP","G","T","splice_acceptor_variant","Vradi07g08020","-","-","-","-","-"]
[7,19881670,"INDEL","TA","T","frameshift_variant","Vradi07g08080","probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X2","-","spliceosomal complex [GO:0005681]","ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]","spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]"]
[7,19881719,"INDEL","AACTG","A","frameshift_variant","Vradi07g08080","probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X2","-","spliceosomal complex [GO:0005681]","ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]","spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]"]
[7,19881779,"INDEL","A","AGT","splice_donor_variant","Vradi07g08080","probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X2","-","spliceosomal complex [GO:0005681]","ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]","spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]"]
[7,20786998,"INDEL","TCTCCC","T","frameshift_variant","Vradi07g08360","-","-","-","-","-"]
[7,21162843,"INDEL","AT","A","frameshift_variant","Vradi07g08390","uncharacterized protein LOC106765469 isoform X1","-","-","-","-"]
[7,21162891,"INDEL","CT","C","frameshift_variant","Vradi07g08390","uncharacterized protein LOC106765469 isoform X1","-","-","-","-"]
[7,21884617,"INDEL","GTAAT","G","splice_donor_variant","Vradi07g08430","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]; integral component of membrane [GO:0016021]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; integral component of membrane [GO:0016021]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[7,21884882,"INDEL","GT","G","splice_donor_variant","Vradi07g08430","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]; integral component of membrane [GO:0016021]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; integral component of membrane [GO:0016021]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[7,21995684,"INDEL","TAC","T","frameshift_variant","Vradi07g08460","-","-","-","-","-"]
[7,21995745,"SNP","G","A","stop_gained","Vradi07g08460","-","-","-","-","-"]
[7,21995797,"INDEL","GA","G","frameshift_variant","Vradi07g08460","-","-","-","-","-"]
[7,21995967,"INDEL","T","TG","frameshift_variant","Vradi07g08460","-","-","-","-","-"]
[7,21995985,"SNP","C","G","stop_gained","Vradi07g08460","-","-","-","-","-"]
[7,22059889,"SNP","C","T","stop_gained","Vradi07g08470","glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like","glycogen biosynthetic process [GO:0005978]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]; glycogen biosynthetic process [GO:0005978]"]
[7,22059928,"SNP","G","C","splice_donor_variant","Vradi07g08470","glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like","glycogen biosynthetic process [GO:0005978]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]; glycogen biosynthetic process [GO:0005978]"]
[7,22060174,"SNP","G","C","splice_acceptor_variant","Vradi07g08470","glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like","glycogen biosynthetic process [GO:0005978]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]; glycogen biosynthetic process [GO:0005978]"]
[7,22060449,"SNP","C","T","stop_gained","Vradi07g08470","glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like","glycogen biosynthetic process [GO:0005978]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]; glycogen biosynthetic process [GO:0005978]"]
[7,22062793,"SNP","G","A","splice_acceptor_variant","Vradi07g08470","glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like","glycogen biosynthetic process [GO:0005978]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]; glycogen biosynthetic process [GO:0005978]"]
[7,22062816,"SNP","G","A","stop_gained","Vradi07g08470","glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic-like","glycogen biosynthetic process [GO:0005978]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; glucose-1-phosphate adenylyltransferase activity [GO:0008878]; glycogen biosynthetic process [GO:0005978]"]
[7,22416489,"SNP","C","T","start_lost","Vradi07g08590","-","-","-","-","-"]
[7,22458518,"SNP","G","T","splice_donor_variant","Vradi07g08610","Omega-protein (EC 5.6.2.1) (Relaxing enzyme) (Swivelase) (Untwisting enzyme)","DNA topological change [GO:0006265]","chromosome [GO:0005694]","DNA binding [GO:0003677]; DNA topoisomerase type I (single strand cut, ATP-independent) activity [GO:0003917]; metal ion binding [GO:0046872]","chromosome [GO:0005694]; DNA binding [GO:0003677]; DNA topoisomerase type I (single strand cut, ATP-independent) activity [GO:0003917]; metal ion binding [GO:0046872]; DNA topological change [GO:0006265]"]
[7,22545555,"INDEL","CTT","C","frameshift_variant","Vradi07g08640","-","-","-","-","-"]
[7,22546125,"SNP","G","T","stop_gained","Vradi07g08640","-","-","-","-","-"]
[7,22572400,"INDEL","A","AG","splice_acceptor_variant","Vradi07g08660","-","-","-","-","-"]
[7,22572790,"SNP","G","T","stop_gained","Vradi07g08660","-","-","-","-","-"]
[7,22705301,"INDEL","AT","A","frameshift_variant","Vradi07g08690","Chalcone synthase (EC 2.3.1.74)","flavonoid biosynthetic process [GO:0009813]","-","naringenin-chalcone synthase activity [GO:0016210]","naringenin-chalcone synthase activity [GO:0016210]; flavonoid biosynthetic process [GO:0009813]"]
[7,22706675,"SNP","G","A","splice_donor_variant","Vradi07g08690","Chalcone synthase (EC 2.3.1.74)","flavonoid biosynthetic process [GO:0009813]","-","naringenin-chalcone synthase activity [GO:0016210]","naringenin-chalcone synthase activity [GO:0016210]; flavonoid biosynthetic process [GO:0009813]"]
[7,22708495,"INDEL","TA","T","frameshift_variant","Vradi07g08690","Chalcone synthase (EC 2.3.1.74)","flavonoid biosynthetic process [GO:0009813]","-","naringenin-chalcone synthase activity [GO:0016210]","naringenin-chalcone synthase activity [GO:0016210]; flavonoid biosynthetic process [GO:0009813]"]
[7,22758810,"SNP","G","A","stop_gained","Vradi07g08700","protein OBERON 3","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[7,22758890,"INDEL","GAATTT","G","frameshift_variant","Vradi07g08700","protein OBERON 3","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[7,23188493,"SNP","G","A","stop_gained","Vradi07g08800","uncharacterized protein LOC111242013","-","-","-","-"]
[7,23188676,"SNP","C","A","stop_gained","Vradi07g08800","uncharacterized protein LOC111242013","-","-","-","-"]
[7,23188761,"INDEL","TC","T","frameshift_variant","Vradi07g08800","uncharacterized protein LOC111242013","-","-","-","-"]
[7,23586521,"INDEL","AAT","A","frameshift_variant","Vradi07g08930","IAA-alanine resistance protein 1","-","integral component of membrane [GO:0016021]","metal ion transmembrane transporter activity [GO:0046873]","integral component of membrane [GO:0016021]; metal ion transmembrane transporter activity [GO:0046873]"]
[7,24565803,"INDEL","GTTAGTAAGTAAATTACATTA","G","splice_donor_variant","Vradi07g09200","-","-","-","-","-"]
[7,24641061,"SNP","G","A","start_lost","Vradi07g09240","-","-","-","-","-"]
[7,24641375,"SNP","C","T","stop_gained","Vradi07g09240","-","-","-","-","-"]
[7,24641997,"SNP","C","T","stop_gained","Vradi07g09240","-","-","-","-","-"]
[7,24642100,"SNP","T","C","splice_donor_variant","Vradi07g09240","-","-","-","-","-"]
[7,24642440,"INDEL","G","GCTGATAGCCTA","frameshift_variant&stop_gained","Vradi07g09240","-","-","-","-","-"]
[7,24642447,"INDEL","TC","T","frameshift_variant","Vradi07g09240","-","-","-","-","-"]
[7,24642656,"SNP","G","A","stop_gained","Vradi07g09240","-","-","-","-","-"]
[7,24666058,"SNP","A","G","splice_acceptor_variant","Vradi07g09250","uncharacterized protein LOC106767143","mitochondrial translation [GO:0032543]","mitochondrion [GO:0005739]","structural constituent of ribosome [GO:0003735]","mitochondrion [GO:0005739]; structural constituent of ribosome [GO:0003735]; mitochondrial translation [GO:0032543]"]
[7,24890747,"INDEL","TGAGA","T","frameshift_variant","Vradi07g09360","uncharacterized protein LOC106780700 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,24962138,"INDEL","ACAAACTAGTAAACTTCATTTGTTTGGCTAACACC","A","splice_acceptor_variant","Vradi07g09390","cytochrome b561 domain-containing protein At4g18260 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,25087888,"SNP","C","G","stop_gained","Vradi07g09430","uncharacterized protein LOC106766222","-","-","-","-"]
[7,25237875,"INDEL","T","TC","frameshift_variant","Vradi07g09470","-","-","-","-","-"]
[7,25645739,"INDEL","TC","T","frameshift_variant","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25645745,"SNP","C","A","stop_gained","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25645787,"SNP","C","A","stop_gained","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25645824,"INDEL","C","CT","frameshift_variant","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25646013,"INDEL","CCT","C","frameshift_variant","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25646135,"SNP","G","A","stop_gained","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25646181,"INDEL","TC","T","frameshift_variant","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25646185,"SNP","G","T","stop_gained","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25646187,"INDEL","A","ATTAAT","frameshift_variant","Vradi07g09530","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[7,25846363,"INDEL","G","GC","frameshift_variant","Vradi07g09610","-","-","-","-","-"]
[7,26117665,"INDEL","AATAT","AATATATATATATATATATATATATATATATATATATAT","frameshift_variant","Vradi07g09670","polygalacturonase At1g48100","carbohydrate metabolic process [GO:0005975]","cell wall [GO:0005618]","polygalacturonase activity [GO:0004650]","cell wall [GO:0005618]; polygalacturonase activity [GO:0004650]; carbohydrate metabolic process [GO:0005975]"]
[7,26117685,"INDEL","*","TATATATATATATATATATATATATATATATATAA","frameshift_variant","Vradi07g09670","polygalacturonase At1g48100","carbohydrate metabolic process [GO:0005975]","cell wall [GO:0005618]","polygalacturonase activity [GO:0004650]","cell wall [GO:0005618]; polygalacturonase activity [GO:0004650]; carbohydrate metabolic process [GO:0005975]"]
[7,26129490,"INDEL","A","AT","frameshift_variant","Vradi07g09680","Peroxiredoxin (EC 1.11.1.24)","-","-","peroxidase activity [GO:0004601]; peroxiredoxin activity [GO:0051920]","peroxidase activity [GO:0004601]; peroxiredoxin activity [GO:0051920]"]
[7,26129493,"INDEL","C","CCAGTA","splice_acceptor_variant","Vradi07g09680","Peroxiredoxin (EC 1.11.1.24)","-","-","peroxidase activity [GO:0004601]; peroxiredoxin activity [GO:0051920]","peroxidase activity [GO:0004601]; peroxiredoxin activity [GO:0051920]"]
[7,26200271,"INDEL","CG","C","frameshift_variant","Vradi07g09700","LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored protein 2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,26201975,"INDEL","CCAACTGGTCCATCTGCCCTTCTGCGCAATGCT","C","frameshift_variant","Vradi07g09700","LOW QUALITY PROTEIN: lysM domain-containing GPI-anchored protein 2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,26249987,"INDEL","TAACAGAGCTTCTTTCCTATCTGGGGGTCCATTAAAAAGCACATGGCCTCTCTTATAGCCTTGCTATTGTTTATGTAATGGTCAC","T","frameshift_variant&splice_acceptor_variant","Vradi07g09730","-","-","-","-","-"]
[7,26250030,"INDEL","AAT","A","frameshift_variant","Vradi07g09730","-","-","-","-","-"]
[7,26250032,"INDEL","A","AC","frameshift_variant","Vradi07g09730","-","-","-","-","-"]
[7,26285525,"INDEL","C","CAGCATAAAAAG","frameshift_variant","Vradi07g09750","-","-","-","-","-"]
[7,26287465,"SNP","G","C","splice_acceptor_variant","Vradi07g09750","-","-","-","-","-"]
[7,26336799,"INDEL","CT","C","frameshift_variant","Vradi07g09770","-","-","-","-","-"]
[7,26348421,"SNP","G","A","stop_gained","Vradi07g09790","-","-","-","-","-"]
[7,26483846,"SNP","G","T","stop_gained","Vradi07g09870","-","-","-","-","-"]
[7,26620966,"SNP","T","A","stop_gained","Vradi07g09920","STS14 protein","-","-","-","-"]
[7,26620983,"INDEL","ACCATGCGCGCCGTCACCGCCGTGCCGTGCGCCCATAGCTGGTTCGCC","A","frameshift_variant","Vradi07g09920","STS14 protein","-","-","-","-"]
[7,26621119,"SNP","G","A","stop_gained","Vradi07g09920","STS14 protein","-","-","-","-"]
[7,26770569,"INDEL","A","AG","frameshift_variant","Vradi07g10000","LOW QUALITY PROTEIN: uncharacterized protein LOC106768296","-","-","-","-"]
[7,27004615,"INDEL","C","CT","frameshift_variant","Vradi07g10140","dof zinc finger protein DOF2.2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,27004629,"INDEL","AC","A","frameshift_variant","Vradi07g10140","dof zinc finger protein DOF2.2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,27004631,"INDEL","AACATTATGGAAAC","A","frameshift_variant","Vradi07g10140","dof zinc finger protein DOF2.2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,27285140,"SNP","C","T","stop_gained","Vradi07g10350","-","-","-","-","-"]
[7,27380075,"SNP","C","T","splice_acceptor_variant","Vradi07g10420","uncharacterized protein LOC106768419","-","-","-","-"]
[7,27558508,"SNP","G","A","splice_acceptor_variant","Vradi07g10550","cysteine proteinase RD21A-like","-","-","cysteine-type peptidase activity [GO:0008234]","cysteine-type peptidase activity [GO:0008234]"]
[7,27558617,"SNP","G","T","stop_gained","Vradi07g10550","cysteine proteinase RD21A-like","-","-","cysteine-type peptidase activity [GO:0008234]","cysteine-type peptidase activity [GO:0008234]"]
[7,27917711,"INDEL","GTT","GT","frameshift_variant","Vradi07g10710","kinesin-like protein KIN-4A isoform X2","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[7,28250593,"INDEL","C","CG","frameshift_variant","Vradi07g10910","WD40 repeat-containing protein HOS15 isoform X2","-","-","-","-"]
[7,28250596,"INDEL","GC","G","frameshift_variant","Vradi07g10910","WD40 repeat-containing protein HOS15 isoform X2","-","-","-","-"]
[7,28303508,"INDEL","CG","C","frameshift_variant","Vradi07g10940","-","-","-","-","-"]
[7,28304452,"INDEL","CG","C","frameshift_variant","Vradi07g10940","-","-","-","-","-"]
[7,28384647,"INDEL","C","CTGCAGCAGGAAGGCAACATAGGAAGATCCATAAAACAA","frameshift_variant","Vradi07g11010","suppressor of RPS4-RLD 1 isoform X1","-","-","-","-"]
[7,28412841,"INDEL","CT","C","frameshift_variant","Vradi07g11020","probable esterase D14L","-","-","-","-"]
[7,28534520,"SNP","G","T","splice_acceptor_variant","Vradi07g11130","-","-","-","-","-"]
[7,28939509,"INDEL","TC","T","frameshift_variant","Vradi07g11400","uncharacterized protein LOC106767810","-","-","-","-"]
[7,28940434,"INDEL","GC","G","frameshift_variant","Vradi07g11400","uncharacterized protein LOC106767810","-","-","-","-"]
[7,28983833,"INDEL","CAT","C","frameshift_variant","Vradi07g11430","ACT domain-containing protein ACR1-like isoform X1","-","-","-","-"]
[7,28983855,"INDEL","CT","C","frameshift_variant","Vradi07g11430","ACT domain-containing protein ACR1-like isoform X1","-","-","-","-"]
[7,29073008,"INDEL","T","TGGGA","frameshift_variant","Vradi07g11470","short-chain dehydrogenase cctT-like","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[7,29073019,"SNP","G","C","stop_lost","Vradi07g11470","short-chain dehydrogenase cctT-like","-","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]"]
[7,29762004,"SNP","C","A","splice_acceptor_variant","Vradi07g11830","type I inositol polyphosphate 5-phosphatase 2","phosphatidylinositol dephosphorylation [GO:0046856]","-","-","phosphatidylinositol dephosphorylation [GO:0046856]"]
[7,30065293,"INDEL","GCGGCA","G","frameshift_variant","Vradi07g12010","probable serine/threonine-protein kinase PBL19 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[7,30214714,"INDEL","ATTATTCTTTGAAGGTAGTATCC","A","frameshift_variant&splice_donor_variant","Vradi07g12090","uncharacterized protein LOC106768407 isoform X1","RNA processing [GO:0006396]","-","RNA binding [GO:0003723]; RNA methyltransferase activity [GO:0008173]","RNA binding [GO:0003723]; RNA methyltransferase activity [GO:0008173]; RNA processing [GO:0006396]"]
[7,30295904,"INDEL","T","TTCTACCTGGGAATTTAATCTG","stop_gained","Vradi07g12140","expansin-like B1","-","extracellular region [GO:0005576]; integral component of membrane [GO:0016021]","-","extracellular region [GO:0005576]; integral component of membrane [GO:0016021]"]
[7,30313947,"INDEL","TG","T","frameshift_variant","Vradi07g12160","expansin-like B1","-","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]"]
[7,30316448,"INDEL","G","GA","frameshift_variant","Vradi07g12160","expansin-like B1","-","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]"]
[7,30361435,"INDEL","G","GC","splice_donor_variant","Vradi07g12200","putative glycerol-3-phosphate transporter 4 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[7,31147207,"INDEL","GTTAGCTTC","G","frameshift_variant","Vradi07g12700","oxysterol-binding protein-related protein 2A isoform X3","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[7,31147296,"INDEL","A","AAT","frameshift_variant","Vradi07g12700","oxysterol-binding protein-related protein 2A isoform X3","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[7,31147338,"SNP","G","A","stop_gained","Vradi07g12700","oxysterol-binding protein-related protein 2A isoform X3","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[7,31387134,"INDEL","A","AT","frameshift_variant","Vradi07g12850","protein TPX2 isoform X4","activation of protein kinase activity [GO:0032147]; regulation of mitotic spindle organization [GO:0060236]","microtubule [GO:0005874]; spindle [GO:0005819]","-","microtubule [GO:0005874]; spindle [GO:0005819]; activation of protein kinase activity [GO:0032147]; regulation of mitotic spindle organization [GO:0060236]"]
[7,31387512,"SNP","G","A","stop_gained","Vradi07g12850","protein TPX2 isoform X4","activation of protein kinase activity [GO:0032147]; regulation of mitotic spindle organization [GO:0060236]","microtubule [GO:0005874]; spindle [GO:0005819]","-","microtubule [GO:0005874]; spindle [GO:0005819]; activation of protein kinase activity [GO:0032147]; regulation of mitotic spindle organization [GO:0060236]"]
[7,31478225,"INDEL","G","GGCACAACATTTCTCTTCTA","frameshift_variant","Vradi07g12950","-","-","-","-","-"]
[7,31708486,"INDEL","AT","A","frameshift_variant&start_lost","Vradi07g13120","sirohydrochlorin ferrochelatase, chloroplastic","-","-","lyase activity [GO:0016829]; metal ion binding [GO:0046872]","lyase activity [GO:0016829]; metal ion binding [GO:0046872]"]
[7,31812067,"SNP","G","T","stop_gained","Vradi07g13170","PGR5-like protein 1A, chloroplastic","photosynthetic electron transport in photosystem I [GO:0009773]","chloroplast thylakoid membrane [GO:0009535]; integral component of membrane [GO:0016021]","oxidoreductase activity, acting on iron-sulfur proteins as donors [GO:0016730]","chloroplast thylakoid membrane [GO:0009535]; integral component of membrane [GO:0016021]; oxidoreductase activity, acting on iron-sulfur proteins as donors [GO:0016730]; photosynthetic electron transport in photosystem I [GO:0009773]"]
[7,31812110,"SNP","A","T","stop_lost","Vradi07g13170","PGR5-like protein 1A, chloroplastic","photosynthetic electron transport in photosystem I [GO:0009773]","chloroplast thylakoid membrane [GO:0009535]; integral component of membrane [GO:0016021]","oxidoreductase activity, acting on iron-sulfur proteins as donors [GO:0016730]","chloroplast thylakoid membrane [GO:0009535]; integral component of membrane [GO:0016021]; oxidoreductase activity, acting on iron-sulfur proteins as donors [GO:0016730]; photosynthetic electron transport in photosystem I [GO:0009773]"]
[7,31828662,"INDEL","A","ACT","frameshift_variant","Vradi07g13200","agamous-like MADS-box protein AGL14 isoform X2","positive regulation of transcription by RNA polymerase II [GO:0045944]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]; positive regulation of transcription by RNA polymerase II [GO:0045944]"]
[7,31894980,"INDEL","TTA","T","frameshift_variant","Vradi07g13250","3-hydroxy-3-methylglutaryl coenzyme A synthase (HMG-CoA synthase) (EC 2.3.3.10)","acetyl-CoA metabolic process [GO:0006084]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; sterol biosynthetic process [GO:0016126]","-","hydroxymethylglutaryl-CoA synthase activity [GO:0004421]","hydroxymethylglutaryl-CoA synthase activity [GO:0004421]; acetyl-CoA metabolic process [GO:0006084]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; sterol biosynthetic process [GO:0016126]"]
[7,32037598,"INDEL","C","CGG","frameshift_variant","Vradi07g13350","scarecrow-like protein 28","positive regulation of brassinosteroid mediated signaling pathway [GO:1900459]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; positive regulation of brassinosteroid mediated signaling pathway [GO:1900459]"]
[7,32037600,"INDEL","T","TGACGG","frameshift_variant","Vradi07g13350","scarecrow-like protein 28","positive regulation of brassinosteroid mediated signaling pathway [GO:1900459]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; positive regulation of brassinosteroid mediated signaling pathway [GO:1900459]"]
[7,32037624,"INDEL","CAACCT","C","frameshift_variant","Vradi07g13350","scarecrow-like protein 28","positive regulation of brassinosteroid mediated signaling pathway [GO:1900459]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; positive regulation of brassinosteroid mediated signaling pathway [GO:1900459]"]
[7,32467886,"SNP","G","A","stop_gained","Vradi07g13680","-","-","-","-","-"]
[7,32498537,"SNP","G","A","stop_gained","Vradi07g13700","-","-","-","-","-"]
[7,32892949,"SNP","G","A","stop_gained","Vradi07g13730","-","-","-","-","-"]
[7,32892982,"SNP","G","A","stop_gained","Vradi07g13730","-","-","-","-","-"]
[7,32900395,"SNP","C","T","stop_gained","Vradi07g13750","-","-","-","-","-"]
[7,32932141,"INDEL","AT","A","frameshift_variant","Vradi07g13760","protein ALP1-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,32957379,"SNP","A","C","splice_acceptor_variant","Vradi07g13770","MADS-box protein JOINTLESS-like","positive regulation of transcription by RNA polymerase II [GO:0045944]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]; positive regulation of transcription by RNA polymerase II [GO:0045944]"]
[7,32957380,"SNP","G","T","splice_acceptor_variant","Vradi07g13770","MADS-box protein JOINTLESS-like","positive regulation of transcription by RNA polymerase II [GO:0045944]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]; positive regulation of transcription by RNA polymerase II [GO:0045944]"]
[7,32967648,"INDEL","A","ACAT","splice_donor_variant","Vradi07g13780","ycf20-like protein","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,32973188,"INDEL","A","AT","frameshift_variant","Vradi07g13790","magnesium-dependent phosphatase 1-like","-","-","phosphatase activity [GO:0016791]","phosphatase activity [GO:0016791]"]
[7,33019338,"SNP","C","G","stop_gained","Vradi07g13810","-","-","-","-","-"]
[7,33051037,"INDEL","TCCACAAGAACAAG","T","frameshift_variant","Vradi07g13840","nicotinamidase 1","-","-","-","-"]
[7,33051088,"INDEL","TGATCC","T","frameshift_variant","Vradi07g13840","nicotinamidase 1","-","-","-","-"]
[7,33225646,"SNP","A","G","start_lost","Vradi07g13870","RNA-binding KH domain-containing protein RCF3","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[7,33284209,"INDEL","ATGATCAAT","A","frameshift_variant","Vradi07g13900","LOW QUALITY PROTEIN: KH domain-containing protein HEN4","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[7,33413967,"INDEL","AC","A","frameshift_variant","Vradi07g13970","-","-","-","-","-"]
[7,33418938,"INDEL","ATG","A","frameshift_variant","Vradi07g13970","-","-","-","-","-"]
[7,33423271,"INDEL","CTT","C","frameshift_variant","Vradi07g13980","glycine-rich cell wall structural protein-like","-","-","-","-"]
[7,33426006,"INDEL","GTGAGAAT","G","splice_donor_variant","Vradi07g13980","glycine-rich cell wall structural protein-like","-","-","-","-"]
[7,33429155,"INDEL","CCG","C","frameshift_variant","Vradi07g13990","-","-","-","-","-"]
[7,33429159,"INDEL","G","GCA","frameshift_variant","Vradi07g13990","-","-","-","-","-"]
[7,33442793,"INDEL","GT","G","frameshift_variant","Vradi07g14000","HVA22-like protein","-","integral component of membrane [GO:0016021]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[7,33442836,"INDEL","CT","C","frameshift_variant","Vradi07g14000","HVA22-like protein","-","integral component of membrane [GO:0016021]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[7,33472029,"INDEL","C","CTACCTTAAATTTTCTTTGAAGTGATTAACTGTGTGT","stop_gained","Vradi07g14020","probable myosin-binding protein 6","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,33472060,"INDEL","TCCTTC","T","frameshift_variant","Vradi07g14020","probable myosin-binding protein 6","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,33472512,"INDEL","T","TTAGAATACTTGAGAAATTTTGCTATGCCAACAAATCCACGAAAAACAACTCTCCA","frameshift_variant","Vradi07g14020","probable myosin-binding protein 6","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,33849717,"SNP","C","T","stop_gained","Vradi07g14190","K(+) efflux antiporter 3, chloroplastic isoform X3","potassium ion transport [GO:0006813]","integral component of membrane [GO:0016021]","solute:proton antiporter activity [GO:0015299]","integral component of membrane [GO:0016021]; solute:proton antiporter activity [GO:0015299]; potassium ion transport [GO:0006813]"]
[7,33933303,"SNP","G","T","start_lost","Vradi07g14210","S-acyltransferase (EC 2.3.1.225) (Palmitoyltransferase)","-","integral component of membrane [GO:0016021]","protein-cysteine S-palmitoyltransferase activity [GO:0019706]","integral component of membrane [GO:0016021]; protein-cysteine S-palmitoyltransferase activity [GO:0019706]"]
[7,33933468,"INDEL","TG","T","frameshift_variant","Vradi07g14210","S-acyltransferase (EC 2.3.1.225) (Palmitoyltransferase)","-","integral component of membrane [GO:0016021]","protein-cysteine S-palmitoyltransferase activity [GO:0019706]","integral component of membrane [GO:0016021]; protein-cysteine S-palmitoyltransferase activity [GO:0019706]"]
[7,33933488,"SNP","G","A","stop_gained","Vradi07g14210","S-acyltransferase (EC 2.3.1.225) (Palmitoyltransferase)","-","integral component of membrane [GO:0016021]","protein-cysteine S-palmitoyltransferase activity [GO:0019706]","integral component of membrane [GO:0016021]; protein-cysteine S-palmitoyltransferase activity [GO:0019706]"]
[7,33934530,"INDEL","TA","T","frameshift_variant","Vradi07g14210","S-acyltransferase (EC 2.3.1.225) (Palmitoyltransferase)","-","integral component of membrane [GO:0016021]","protein-cysteine S-palmitoyltransferase activity [GO:0019706]","integral component of membrane [GO:0016021]; protein-cysteine S-palmitoyltransferase activity [GO:0019706]"]
[7,33934532,"SNP","C","G","stop_gained","Vradi07g14210","S-acyltransferase (EC 2.3.1.225) (Palmitoyltransferase)","-","integral component of membrane [GO:0016021]","protein-cysteine S-palmitoyltransferase activity [GO:0019706]","integral component of membrane [GO:0016021]; protein-cysteine S-palmitoyltransferase activity [GO:0019706]"]
[7,34019495,"SNP","G","A","stop_gained","Vradi07g14270","-","-","-","-","-"]
[7,34244879,"INDEL","CTT","C","frameshift_variant","Vradi07g14390","calcium/calmodulin-regulated receptor-like kinase 1 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,34344204,"INDEL","T","TATCA","frameshift_variant","Vradi07g14430","uncharacterized protein LOC106768523 isoform X1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,34526495,"SNP","G","A","splice_acceptor_variant","Vradi07g14480","uncharacterized protein LOC106767730","-","-","-","-"]
[7,34526543,"INDEL","GA","G","frameshift_variant","Vradi07g14480","uncharacterized protein LOC106767730","-","-","-","-"]
[7,34822638,"INDEL","G","GC","frameshift_variant","Vradi07g14770","1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC 1.1.1.267)","isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [GO:0019288]","-","1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [GO:0030604]; isomerase activity [GO:0016853]; metal ion binding [GO:0046872]; NADPH binding [GO:0070402]","1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [GO:0030604]; isomerase activity [GO:0016853]; metal ion binding [GO:0046872]; NADPH binding [GO:0070402]; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [GO:0019288]"]
[7,34864793,"INDEL","T","TG","frameshift_variant","Vradi07g14810","serine/threonine-protein kinase HT1 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,34864799,"INDEL","AG","A","frameshift_variant","Vradi07g14810","serine/threonine-protein kinase HT1 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,34864808,"INDEL","CAAATACTTTGACCATGACACTGCTCGCTTATACTCCCCAAGTGATAGCCTTCTGCCTGATCTCACGTTGTTAG","C","frameshift_variant","Vradi07g14810","serine/threonine-protein kinase HT1 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,34864891,"INDEL","TA","T","frameshift_variant","Vradi07g14810","serine/threonine-protein kinase HT1 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,35069758,"INDEL","G","GGTAT","splice_donor_variant","Vradi07g14980","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[7,35109101,"SNP","C","T","stop_gained","Vradi07g15010","nucleobase-ascorbate transporter 4","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[7,35226600,"INDEL","CTA","C","frameshift_variant","Vradi07g15100","E2F transcription factor-like E2FE isoform X2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]; transcription regulator complex [GO:0005667]","DNA binding [GO:0003677]","nucleus [GO:0005634]; transcription regulator complex [GO:0005667]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,35226670,"INDEL","CGGGCACGCACGCTGGAGCGAAA","C","frameshift_variant","Vradi07g15100","E2F transcription factor-like E2FE isoform X2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]; transcription regulator complex [GO:0005667]","DNA binding [GO:0003677]","nucleus [GO:0005634]; transcription regulator complex [GO:0005667]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,35226703,"INDEL","GAT","G","frameshift_variant","Vradi07g15100","E2F transcription factor-like E2FE isoform X2","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]; transcription regulator complex [GO:0005667]","DNA binding [GO:0003677]","nucleus [GO:0005634]; transcription regulator complex [GO:0005667]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,35784772,"INDEL","G","GC","frameshift_variant","Vradi07g15480","rhomboid-like protein 11, chloroplastic","regulation of jasmonic acid metabolic process [GO:0080140]","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]","protein domain specific binding [GO:0019904]; serine-type endopeptidase activity [GO:0004252]","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]; protein domain specific binding [GO:0019904]; serine-type endopeptidase activity [GO:0004252]; regulation of jasmonic acid metabolic process [GO:0080140]"]
[7,36096159,"INDEL","G","GTA","splice_donor_variant","Vradi07g15590","Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)","organic substance metabolic process [GO:0071704]","extracellular region [GO:0005576]","mannan endo-1,4-beta-mannosidase activity [GO:0016985]","extracellular region [GO:0005576]; mannan endo-1,4-beta-mannosidase activity [GO:0016985]; organic substance metabolic process [GO:0071704]"]
[7,36195707,"INDEL","AGT","A","frameshift_variant","Vradi07g15640","lysine-specific demethylase JMJ25","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[7,36424497,"INDEL","A","AGGGTTCCACT","frameshift_variant","Vradi07g15730","LOW QUALITY PROTEIN: berberine bridge enzyme-like 17","-","-","FAD binding [GO:0071949]; oxidoreductase activity [GO:0016491]","FAD binding [GO:0071949]; oxidoreductase activity [GO:0016491]"]
[7,36465011,"INDEL","C","CAG","frameshift_variant","Vradi07g15760","Riboflavin kinase (EC 2.7.1.26)","FMN biosynthetic process [GO:0009398]; riboflavin biosynthetic process [GO:0009231]","-","ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; riboflavin kinase activity [GO:0008531]","ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; riboflavin kinase activity [GO:0008531]; FMN biosynthetic process [GO:0009398]; riboflavin biosynthetic process [GO:0009231]"]
[7,36465100,"INDEL","GGTGTCGTTCCTATTATTTTATGAGCTTCCCTGCCGTCCCATTCCTTTCC","G","frameshift_variant","Vradi07g15760","Riboflavin kinase (EC 2.7.1.26)","FMN biosynthetic process [GO:0009398]; riboflavin biosynthetic process [GO:0009231]","-","ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; riboflavin kinase activity [GO:0008531]","ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; riboflavin kinase activity [GO:0008531]; FMN biosynthetic process [GO:0009398]; riboflavin biosynthetic process [GO:0009231]"]
[7,36726727,"INDEL","AAGATGGGAAT","A","frameshift_variant","Vradi07g15950","protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[7,36808433,"INDEL","GA","G","frameshift_variant","Vradi07g15990","caffeoylshikimate esterase","-","-","-","-"]
[7,37047471,"INDEL","GACGGTGA","GACGGTGAACGGTGA","frameshift_variant","Vradi07g16060","mitochondrial inner membrane protein OXA1","-","integral component of membrane [GO:0016021]","membrane insertase activity [GO:0032977]","integral component of membrane [GO:0016021]; membrane insertase activity [GO:0032977]"]
[7,37051409,"INDEL","C","CAGATGTCCAGGGGATCTTTAACACTGAGTACTACCTTAGCGAAAA","stop_gained","Vradi07g16070","uncharacterized protein LOC106767421","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,37051435,"INDEL","AAAAG","A","frameshift_variant","Vradi07g16070","uncharacterized protein LOC106767421","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,37051512,"SNP","G","T","splice_donor_variant","Vradi07g16070","uncharacterized protein LOC106767421","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,37317485,"SNP","C","T","splice_acceptor_variant","Vradi07g16270","Vesicle-fusing ATPase (EC 3.6.4.6)","protein transport [GO:0015031]; SNARE complex disassembly [GO:0035494]","cytoplasm [GO:0005737]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; metal ion binding [GO:0046872]; protein transport [GO:0015031]; SNARE complex disassembly [GO:0035494]"]
[7,37323581,"INDEL","AC","A","splice_donor_variant","Vradi07g16270","Vesicle-fusing ATPase (EC 3.6.4.6)","protein transport [GO:0015031]; SNARE complex disassembly [GO:0035494]","cytoplasm [GO:0005737]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; metal ion binding [GO:0046872]; protein transport [GO:0015031]; SNARE complex disassembly [GO:0035494]"]
[7,38145115,"INDEL","TTGGTGGAATTG","T","frameshift_variant","Vradi07g16730","-","-","-","-","-"]
[7,38145188,"INDEL","A","ATGATCCCTAAT","frameshift_variant&stop_gained","Vradi07g16730","-","-","-","-","-"]
[7,38496016,"SNP","C","T","splice_donor_variant","Vradi07g17100","uncharacterized protein LOC106767326","-","-","endonuclease activity [GO:0004519]; nucleic acid binding [GO:0003676]","endonuclease activity [GO:0004519]; nucleic acid binding [GO:0003676]"]
[7,38593635,"SNP","C","T","stop_gained","Vradi07g17190","pentatricopeptide repeat-containing protein At5g61370, mitochondrial","-","-","-","-"]
[7,38597362,"INDEL","TG","T","frameshift_variant","Vradi07g17200","uncharacterized protein LOC111242126","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,39752196,"SNP","A","T","stop_gained","Vradi07g18240","protein PGR","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,39834001,"INDEL","G","GA","frameshift_variant","Vradi07g18300","lysine-specific demethylase JMJ18-like","methylation [GO:0032259]","nucleus [GO:0005634]","methyltransferase activity [GO:0008168]","nucleus [GO:0005634]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[7,39873041,"INDEL","GA","G","frameshift_variant","Vradi07g18340","-","-","-","-","-"]
[7,39924826,"INDEL","T","TCCATTAGAGTCAAACTCTA","frameshift_variant","Vradi07g18380","glycosyltransferase family protein 64 C3","protein glycosylation [GO:0006486]","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]; protein glycosylation [GO:0006486]"]
[7,39936995,"SNP","G","T","stop_gained","Vradi07g18390","protein JINGUBANG-like","-","-","-","-"]
[7,40082430,"SNP","T","G","stop_gained","Vradi07g18500","paramyosin","-","-","-","-"]
[7,40084703,"INDEL","AAG","A","frameshift_variant","Vradi07g18500","paramyosin","-","-","-","-"]
[7,40084708,"INDEL","A","AAG","frameshift_variant","Vradi07g18500","paramyosin","-","-","-","-"]
[7,40230576,"INDEL","T","TC","frameshift_variant","Vradi07g18610","putative clathrin assembly protein At4g40080","endocytosis [GO:0006897]","clathrin-coated pit [GO:0005905]; clathrin-coated vesicle [GO:0030136]; Golgi apparatus [GO:0005794]","phospholipid binding [GO:0005543]","clathrin-coated pit [GO:0005905]; clathrin-coated vesicle [GO:0030136]; Golgi apparatus [GO:0005794]; phospholipid binding [GO:0005543]; endocytosis [GO:0006897]"]
[7,40232044,"SNP","G","A","stop_gained","Vradi07g18610","putative clathrin assembly protein At4g40080","endocytosis [GO:0006897]","clathrin-coated pit [GO:0005905]; clathrin-coated vesicle [GO:0030136]; Golgi apparatus [GO:0005794]","phospholipid binding [GO:0005543]","clathrin-coated pit [GO:0005905]; clathrin-coated vesicle [GO:0030136]; Golgi apparatus [GO:0005794]; phospholipid binding [GO:0005543]; endocytosis [GO:0006897]"]
[7,40260762,"SNP","G","C","stop_gained","Vradi07g18640","E3 ubiquitin-protein ligase RING1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,40260779,"INDEL","TTGGCATTTGTTTTGGCAGAGTG","T","start_lost","Vradi07g18640","E3 ubiquitin-protein ligase RING1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,40357084,"SNP","C","T","stop_gained","Vradi07g18670","LMBR1 domain-containing protein 2 homolog A-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,40357296,"SNP","G","A","stop_gained","Vradi07g18670","LMBR1 domain-containing protein 2 homolog A-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,40519528,"INDEL","GGGTTT","G","frameshift_variant","Vradi07g18790","Tubulin-folding cofactor C","cell morphogenesis [GO:0000902]; post-chaperonin tubulin folding pathway [GO:0007023]","cytoplasm [GO:0005737]","tubulin binding [GO:0015631]","cytoplasm [GO:0005737]; tubulin binding [GO:0015631]; cell morphogenesis [GO:0000902]; post-chaperonin tubulin folding pathway [GO:0007023]"]
[7,40519535,"INDEL","TTCTTGAAGGAGAATCTG","T","frameshift_variant","Vradi07g18790","Tubulin-folding cofactor C","cell morphogenesis [GO:0000902]; post-chaperonin tubulin folding pathway [GO:0007023]","cytoplasm [GO:0005737]","tubulin binding [GO:0015631]","cytoplasm [GO:0005737]; tubulin binding [GO:0015631]; cell morphogenesis [GO:0000902]; post-chaperonin tubulin folding pathway [GO:0007023]"]
[7,40521439,"SNP","T","C","stop_lost","Vradi07g18800","50S ribosomal protein L29, chloroplastic","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[7,40521460,"INDEL","AC","A","frameshift_variant","Vradi07g18800","50S ribosomal protein L29, chloroplastic","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[7,40521538,"INDEL","CTTTGCATTCCACAATCGCAGTGACG","C","frameshift_variant","Vradi07g18800","50S ribosomal protein L29, chloroplastic","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[7,40521677,"INDEL","TGAATCTCAAG","T","frameshift_variant","Vradi07g18800","50S ribosomal protein L29, chloroplastic","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[7,40536038,"SNP","C","T","splice_acceptor_variant","Vradi07g18820","calmodulin-binding transcription activator 3","-","nucleus [GO:0005634]","calmodulin binding [GO:0005516]; DNA binding [GO:0003677]","nucleus [GO:0005634]; calmodulin binding [GO:0005516]; DNA binding [GO:0003677]"]
[7,40993354,"INDEL","A","AT","frameshift_variant","Vradi07g19150","F-box protein At1g10780","-","-","-","-"]
[7,41304424,"INDEL","C","CG","frameshift_variant","Vradi07g19350","calpain-type cysteine protease DEK1 isoform X2","-","integral component of membrane [GO:0016021]","calcium-dependent cysteine-type endopeptidase activity [GO:0004198]","integral component of membrane [GO:0016021]; calcium-dependent cysteine-type endopeptidase activity [GO:0004198]"]
[7,41406642,"SNP","C","G","splice_acceptor_variant","Vradi07g19410","mitogen-activated protein kinase kinase kinase 1 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[7,41412103,"SNP","C","A","start_lost","Vradi07g19410","mitogen-activated protein kinase kinase kinase 1 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[7,41418684,"INDEL","TC","T","frameshift_variant","Vradi07g19420","uncharacterized protein LOC106780549","-","-","-","-"]
[7,41418690,"INDEL","A","AG","frameshift_variant","Vradi07g19420","uncharacterized protein LOC106780549","-","-","-","-"]
[7,41419851,"SNP","C","T","stop_gained","Vradi07g19420","uncharacterized protein LOC106780549","-","-","-","-"]
[7,41420172,"SNP","G","T","splice_acceptor_variant","Vradi07g19420","uncharacterized protein LOC106780549","-","-","-","-"]
[7,41420388,"INDEL","A","AC","frameshift_variant","Vradi07g19420","uncharacterized protein LOC106780549","-","-","-","-"]
[7,41420461,"SNP","G","A","splice_donor_variant","Vradi07g19420","uncharacterized protein LOC106780549","-","-","-","-"]
[7,41516757,"SNP","G","C","stop_gained","Vradi07g19480","ADP-ribosylation factor GTPase-activating protein AGD12-like","-","-","GTPase activator activity [GO:0005096]","GTPase activator activity [GO:0005096]"]
[7,41587792,"SNP","T","C","splice_acceptor_variant","Vradi07g19520","4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96)","tetrahydrobiopterin biosynthetic process [GO:0006729]","-","4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]","4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]; tetrahydrobiopterin biosynthetic process [GO:0006729]"]
[7,41587960,"INDEL","GGATGCAAATGAGTTTAATAAGTAGCCATACCCAGGGGCTTAAAAGATA","G","frameshift_variant&splice_acceptor_variant","Vradi07g19520","4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96)","tetrahydrobiopterin biosynthetic process [GO:0006729]","-","4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]","4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]; tetrahydrobiopterin biosynthetic process [GO:0006729]"]
[7,41598964,"SNP","G","T","splice_donor_variant","Vradi07g19530","CCT-alpha (T-complex protein 1 subunit alpha)","protein folding [GO:0006457]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; unfolded protein binding [GO:0051082]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]; unfolded protein binding [GO:0051082]; protein folding [GO:0006457]"]
[7,41652278,"INDEL","T","TG","frameshift_variant","Vradi07g19590","carboxyl-terminal-processing peptidase 1, chloroplastic","-","-","serine-type peptidase activity [GO:0008236]","serine-type peptidase activity [GO:0008236]"]
[7,41666375,"SNP","C","T","stop_gained","Vradi07g19610","cold-regulated 413 inner membrane protein 2, chloroplastic isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,41763073,"INDEL","G","GT","splice_donor_variant","Vradi07g19630","uncharacterized protein LOC106769157","rRNA processing [GO:0006364]","cytoplasm [GO:0005737]; ribosome [GO:0005840]","ribosome binding [GO:0043022]","cytoplasm [GO:0005737]; ribosome [GO:0005840]; ribosome binding [GO:0043022]; rRNA processing [GO:0006364]"]
[7,41807303,"INDEL","GCT","G","frameshift_variant","Vradi07g19680","Xyloglucan endotransglucosylase/hydrolase (EC 2.4.1.207)","cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]; xyloglucan metabolic process [GO:0010411]","apoplast [GO:0048046]; cell wall [GO:0005618]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; xyloglucan:xyloglucosyl transferase activity [GO:0016762]","apoplast [GO:0048046]; cell wall [GO:0005618]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; xyloglucan:xyloglucosyl transferase activity [GO:0016762]; cell wall biogenesis [GO:0042546]; cell wall organization [GO:0071555]; xyloglucan metabolic process [GO:0010411]"]
[7,41837032,"SNP","G","A","splice_donor_variant","Vradi07g19700","Exonuclease 1 (EC 3.1.-.-)","DNA repair [GO:0006281]","nucleus [GO:0005634]","5'-3' exodeoxyribonuclease activity [GO:0035312]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]","nucleus [GO:0005634]; 5'-3' exodeoxyribonuclease activity [GO:0035312]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]; DNA repair [GO:0006281]"]
[7,41840542,"SNP","C","G","stop_gained","Vradi07g19700","Exonuclease 1 (EC 3.1.-.-)","DNA repair [GO:0006281]","nucleus [GO:0005634]","5'-3' exodeoxyribonuclease activity [GO:0035312]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]","nucleus [GO:0005634]; 5'-3' exodeoxyribonuclease activity [GO:0035312]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]; DNA repair [GO:0006281]"]
[7,41863257,"SNP","C","T","stop_gained","Vradi07g19720","-","-","-","-","-"]
[7,42336687,"INDEL","TGCACC","T","frameshift_variant","Vradi07g20040","uncharacterized protein LOC106766466","nitrogen compound metabolic process [GO:0006807]","-","racemase activity, acting on amino acids and derivatives [GO:0036361]","racemase activity, acting on amino acids and derivatives [GO:0036361]; nitrogen compound metabolic process [GO:0006807]"]
[7,42416803,"INDEL","AGAAATCATGT","A","frameshift_variant","Vradi07g20130","Ribonucloprotein","-","nucleolus [GO:0005730]","RNA binding [GO:0003723]","nucleolus [GO:0005730]; RNA binding [GO:0003723]"]
[7,42568747,"INDEL","CG","C","frameshift_variant","Vradi07g20270","CBL-interacting serine/threonine-protein kinase 24 isoform X1","signal transduction [GO:0007165]","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]; signal transduction [GO:0007165]"]
[7,42756819,"SNP","T","C","splice_acceptor_variant","Vradi07g20400","mitotic-spindle organizing protein 1B","gamma-tubulin complex localization [GO:0033566]","gamma-tubulin ring complex [GO:0008274]","-","gamma-tubulin ring complex [GO:0008274]; gamma-tubulin complex localization [GO:0033566]"]
[7,43054235,"SNP","C","A","splice_donor_variant","Vradi07g20590","probable glycosyltransferase At5g20260 isoform X2","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]","transferase activity, transferring glycosyl groups [GO:0016757]","Golgi membrane [GO:0000139]; transferase activity, transferring glycosyl groups [GO:0016757]; protein glycosylation [GO:0006486]"]
[7,43219282,"INDEL","TGC","T","frameshift_variant","Vradi07g20720","H(+)-exporting diphosphatase (EC 7.1.3.1)","-","integral component of membrane [GO:0016021]","inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]","integral component of membrane [GO:0016021]; inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]"]
[7,43219302,"INDEL","TGGTCAGTTTTATATTAATTCCTATAAGTAACCAAGTTTGTGGTGAAAATTATTTAATGACGGGTTCTTGTATATTTATACATTAATACATTGTTGCTTTTTATATCTGTGAACTCGAATAATATTTTTATTTTGTATTGCA","T","frameshift_variant&splice_acceptor_variant&splice_donor_variant","Vradi07g20720","H(+)-exporting diphosphatase (EC 7.1.3.1)","-","integral component of membrane [GO:0016021]","inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]","integral component of membrane [GO:0016021]; inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]"]
[7,43219529,"INDEL","TAGGTAAGTAATTTTAGCGTAATGTTTTACTATTTTTTTACCTTTGTGTAATCATATCATCAGGCTTTAGCTTGACTATGTGTCTGGTTTTGC","T","frameshift_variant&splice_donor_variant","Vradi07g20720","H(+)-exporting diphosphatase (EC 7.1.3.1)","-","integral component of membrane [GO:0016021]","inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]","integral component of membrane [GO:0016021]; inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]"]
[7,43219952,"INDEL","AAGGTGTGGATTTTGATTTATGTTGCCTTCAAACCCATTCTGTAAGTTAACGCAAACACATGTTTTCTTGCTACTTATCTGATATCTATATTATTCTGTTTT","A","frameshift_variant&splice_donor_variant","Vradi07g20720","H(+)-exporting diphosphatase (EC 7.1.3.1)","-","integral component of membrane [GO:0016021]","inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]","integral component of membrane [GO:0016021]; inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]"]
[7,43220461,"INDEL","GTACAGGTAATGTTTCATCCACCCCTCCTTATTCTGTAGTTTACTCAAAAACCTTGTTGTCTGTCATCCTCCCACATATTCTTTGCATCTAAGACATATTTCCATGCCATGCT","G","frameshift_variant&splice_donor_variant","Vradi07g20720","H(+)-exporting diphosphatase (EC 7.1.3.1)","-","integral component of membrane [GO:0016021]","inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]","integral component of membrane [GO:0016021]; inorganic diphosphatase activity [GO:0004427]; pyrophosphate hydrolysis-driven proton transmembrane transporter activity [GO:0009678]"]
[7,43242590,"SNP","C","A","splice_donor_variant","Vradi07g20750","heparanase-like protein 3","-","membrane [GO:0016020]","hydrolase activity, acting on glycosyl bonds [GO:0016798]","membrane [GO:0016020]; hydrolase activity, acting on glycosyl bonds [GO:0016798]"]
[7,43242629,"INDEL","GTT","G","frameshift_variant","Vradi07g20750","heparanase-like protein 3","-","membrane [GO:0016020]","hydrolase activity, acting on glycosyl bonds [GO:0016798]","membrane [GO:0016020]; hydrolase activity, acting on glycosyl bonds [GO:0016798]"]
[7,43242632,"INDEL","C","CAA","frameshift_variant","Vradi07g20750","heparanase-like protein 3","-","membrane [GO:0016020]","hydrolase activity, acting on glycosyl bonds [GO:0016798]","membrane [GO:0016020]; hydrolase activity, acting on glycosyl bonds [GO:0016798]"]
[7,43285612,"INDEL","TCAGAA","T","frameshift_variant","Vradi07g20800","-","-","-","-","-"]
[7,43285640,"INDEL","GTA","G","splice_donor_variant","Vradi07g20800","-","-","-","-","-"]
[7,43285983,"INDEL","GGTCTTTCAAACTTGGATTCCTTGAGTATCAGGAAGAGCAGCAGT","G","frameshift_variant","Vradi07g20800","-","-","-","-","-"]
[7,43286045,"INDEL","GCGTGCTTTCTC","G","frameshift_variant","Vradi07g20800","-","-","-","-","-"]
[7,43490518,"INDEL","CT","C","frameshift_variant","Vradi07g20960","E3 ubiquitin-protein ligase RLIM isoform X1","-","-","-","-"]
[7,43790340,"SNP","T","C","start_lost","Vradi07g21170","DEAD-box ATP-dependent RNA helicase 1-like isoform X1","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[7,44074177,"INDEL","A","ATCCACATATC","frameshift_variant","Vradi07g21390","signal recognition particle receptor subunit alpha","SRP-dependent cotranslational protein targeting to membrane [GO:0006614]","signal recognition particle receptor complex [GO:0005785]","GTPase activity [GO:0003924]; GTP binding [GO:0005525]; signal recognition particle binding [GO:0005047]","signal recognition particle receptor complex [GO:0005785]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]"]
[7,44202720,"INDEL","C","CT","frameshift_variant","Vradi07g21540","DNA-directed RNA polymerase (EC 2.7.7.6)","transcription, DNA-templated [GO:0006351]","-","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]","DNA binding [GO:0003677]; DNA-directed 5'-3' RNA polymerase activity [GO:0003899]; transcription, DNA-templated [GO:0006351]"]
[7,44510293,"SNP","T","G","stop_gained","Vradi07g21770","transcription factor IBH1-like 1","-","-","-","-"]
[7,44718757,"INDEL","C","CA","frameshift_variant","Vradi07g21900","glutamate receptor 2.8","-","integral component of membrane [GO:0016021]","ligand-gated ion channel activity [GO:0015276]","integral component of membrane [GO:0016021]; ligand-gated ion channel activity [GO:0015276]"]
[7,44718761,"INDEL","ACT","A","frameshift_variant","Vradi07g21900","glutamate receptor 2.8","-","integral component of membrane [GO:0016021]","ligand-gated ion channel activity [GO:0015276]","integral component of membrane [GO:0016021]; ligand-gated ion channel activity [GO:0015276]"]
[7,44718765,"INDEL","G","GT","frameshift_variant","Vradi07g21900","glutamate receptor 2.8","-","integral component of membrane [GO:0016021]","ligand-gated ion channel activity [GO:0015276]","integral component of membrane [GO:0016021]; ligand-gated ion channel activity [GO:0015276]"]
[7,44718768,"INDEL","T","TC","frameshift_variant","Vradi07g21900","glutamate receptor 2.8","-","integral component of membrane [GO:0016021]","ligand-gated ion channel activity [GO:0015276]","integral component of membrane [GO:0016021]; ligand-gated ion channel activity [GO:0015276]"]
[7,44718832,"INDEL","A","AC","frameshift_variant","Vradi07g21900","glutamate receptor 2.8","-","integral component of membrane [GO:0016021]","ligand-gated ion channel activity [GO:0015276]","integral component of membrane [GO:0016021]; ligand-gated ion channel activity [GO:0015276]"]
[7,44718834,"INDEL","C","CAGA","stop_gained","Vradi07g21900","glutamate receptor 2.8","-","integral component of membrane [GO:0016021]","ligand-gated ion channel activity [GO:0015276]","integral component of membrane [GO:0016021]; ligand-gated ion channel activity [GO:0015276]"]
[7,44718835,"INDEL","CCGTT","C","frameshift_variant","Vradi07g21900","glutamate receptor 2.8","-","integral component of membrane [GO:0016021]","ligand-gated ion channel activity [GO:0015276]","integral component of membrane [GO:0016021]; ligand-gated ion channel activity [GO:0015276]"]
[7,44730772,"SNP","C","T","splice_acceptor_variant","Vradi07g21910","-","-","-","-","-"]
[7,44824138,"INDEL","ATTGACGTGCTTGG","A","frameshift_variant","Vradi07g21960","1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)","1-deoxy-D-xylulose 5-phosphate biosynthetic process [GO:0052865]; terpenoid biosynthetic process [GO:0016114]; thiamine biosynthetic process [GO:0009228]","-","1-deoxy-D-xylulose-5-phosphate synthase activity [GO:0008661]","1-deoxy-D-xylulose-5-phosphate synthase activity [GO:0008661]; 1-deoxy-D-xylulose 5-phosphate biosynthetic process [GO:0052865]; terpenoid biosynthetic process [GO:0016114]; thiamine biosynthetic process [GO:0009228]"]
[7,44824156,"INDEL","CAATTT","C","frameshift_variant","Vradi07g21960","1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)","1-deoxy-D-xylulose 5-phosphate biosynthetic process [GO:0052865]; terpenoid biosynthetic process [GO:0016114]; thiamine biosynthetic process [GO:0009228]","-","1-deoxy-D-xylulose-5-phosphate synthase activity [GO:0008661]","1-deoxy-D-xylulose-5-phosphate synthase activity [GO:0008661]; 1-deoxy-D-xylulose 5-phosphate biosynthetic process [GO:0052865]; terpenoid biosynthetic process [GO:0016114]; thiamine biosynthetic process [GO:0009228]"]
[7,44824171,"SNP","T","C","splice_acceptor_variant","Vradi07g21960","1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)","1-deoxy-D-xylulose 5-phosphate biosynthetic process [GO:0052865]; terpenoid biosynthetic process [GO:0016114]; thiamine biosynthetic process [GO:0009228]","-","1-deoxy-D-xylulose-5-phosphate synthase activity [GO:0008661]","1-deoxy-D-xylulose-5-phosphate synthase activity [GO:0008661]; 1-deoxy-D-xylulose 5-phosphate biosynthetic process [GO:0052865]; terpenoid biosynthetic process [GO:0016114]; thiamine biosynthetic process [GO:0009228]"]
[7,45338093,"INDEL","GGTGGCGGCGGAGTCGAAGCGGTTGCCGATGTCTGCGGCGCAACGTTT","G","frameshift_variant","Vradi07g22370","uncharacterized protein LOC106767282","-","-","-","-"]
[7,45496691,"SNP","A","T","stop_gained","Vradi07g22500","uncharacterized protein LOC106769134 isoform X2","-","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]","integral component of membrane [GO:0016021]; transferase activity, transferring glycosyl groups [GO:0016757]"]
[7,45576519,"INDEL","GGCTATATGAACCACATATCAACAATATCATAAA","G","frameshift_variant&stop_lost","Vradi07g22570","tRNA-specific adenosine deaminase 2 isoform X1","-","-","hydrolase activity [GO:0016787]; zinc ion binding [GO:0008270]","hydrolase activity [GO:0016787]; zinc ion binding [GO:0008270]"]
[7,45661393,"SNP","C","T","stop_gained","Vradi07g22640","protein SMAX1-LIKE 4-like","-","-","-","-"]
[7,45860458,"SNP","C","T","splice_acceptor_variant","Vradi07g22810","protein trichome birefringence-like 5","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,45950703,"SNP","C","A","splice_acceptor_variant","Vradi07g22910","CWF19-like protein 2","-","-","-","-"]
[7,46003977,"INDEL","ACC","A","frameshift_variant","Vradi07g22950","CRM-domain containing factor CFM3, chloroplastic/mitochondrial","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[7,46003980,"INDEL","ACCAC","ACAC","frameshift_variant","Vradi07g22950","CRM-domain containing factor CFM3, chloroplastic/mitochondrial","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[7,46028032,"SNP","G","A","stop_gained","Vradi07g22960","uncharacterized protein LOC106769539 isoform X2","-","-","-","-"]
[7,46033418,"INDEL","T","TGTAACACA","frameshift_variant","Vradi07g22960","uncharacterized protein LOC106769539 isoform X2","-","-","-","-"]
[7,46058359,"INDEL","AACCTAGCCTGC","A","frameshift_variant","Vradi07g22970","Recombinase A protein (Fragment)","DNA recombination [GO:0006310]; DNA repair [GO:0006281]","-","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]"]
[7,46058373,"INDEL","TGC","T","frameshift_variant","Vradi07g22970","Recombinase A protein (Fragment)","DNA recombination [GO:0006310]; DNA repair [GO:0006281]","-","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; single-stranded DNA binding [GO:0003697]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]"]
[7,46097710,"SNP","C","G","stop_lost","Vradi07g23010","uncharacterized protein LOC106767463","-","-","-","-"]
[7,46098419,"SNP","T","A","stop_gained","Vradi07g23010","uncharacterized protein LOC106767463","-","-","-","-"]
[7,46554815,"INDEL","AG","A","frameshift_variant","Vradi07g23430","protein LURP-one-related 6","-","-","-","-"]
[7,46872563,"INDEL","AGAGTTCCT","A","frameshift_variant&splice_acceptor_variant","Vradi07g23730","uncharacterized protein LOC106769256","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,46926319,"INDEL","ACCTTCTCTAGAGTACCGAAGG","A","frameshift_variant&splice_donor_variant","Vradi07g23780","-","-","-","-","-"]
[7,47206799,"SNP","A","G","stop_lost","Vradi07g24000","uncharacterized protein LOC106771369","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[7,47313521,"INDEL","AGG","A","frameshift_variant","Vradi07g24050","tRNA pseudouridine synthase (EC 5.4.99.12)","pseudouridine synthesis [GO:0001522]; tRNA processing [GO:0008033]","-","RNA binding [GO:0003723]; tRNA pseudouridine synthase activity [GO:0106029]","RNA binding [GO:0003723]; tRNA pseudouridine synthase activity [GO:0106029]; pseudouridine synthesis [GO:0001522]; tRNA processing [GO:0008033]"]
[7,47313532,"SNP","G","A","stop_gained","Vradi07g24050","tRNA pseudouridine synthase (EC 5.4.99.12)","pseudouridine synthesis [GO:0001522]; tRNA processing [GO:0008033]","-","RNA binding [GO:0003723]; tRNA pseudouridine synthase activity [GO:0106029]","RNA binding [GO:0003723]; tRNA pseudouridine synthase activity [GO:0106029]; pseudouridine synthesis [GO:0001522]; tRNA processing [GO:0008033]"]
[7,47521790,"INDEL","G","GTAA","splice_donor_variant","Vradi07g24260","probable inactive DNA (Cytosine-5)-methyltransferase DRM3 isoform X1","DNA methylation [GO:0006306]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; DNA methylation [GO:0006306]"]
[7,47877196,"SNP","G","A","stop_gained","Vradi07g24530","DNA replication licensing factor MCM2 (EC 3.6.4.12)","DNA replication initiation [GO:0006270]; negative regulation of DNA helicase activity [GO:1905775]","MCM complex [GO:0042555]; nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; metal ion binding [GO:0046872]","MCM complex [GO:0042555]; nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; metal ion binding [GO:0046872]; DNA replication initiation [GO:0006270]; negative regulation of DNA helicase activity [GO:1905775]"]
[7,48174645,"SNP","C","G","splice_donor_variant","Vradi07g24810","3-oxo-Delta(4,5)-steroid 5-beta-reductase","-","-","-","-"]
[7,48363327,"SNP","C","T","splice_acceptor_variant","Vradi07g24970","probable protein phosphatase 2C 34","-","-","phosphatase activity [GO:0016791]","phosphatase activity [GO:0016791]"]
[7,48363492,"SNP","T","A","stop_gained","Vradi07g24970","probable protein phosphatase 2C 34","-","-","phosphatase activity [GO:0016791]","phosphatase activity [GO:0016791]"]
[7,49020660,"INDEL","C","CTA","frameshift_variant&stop_gained","Vradi07g25630","sodium/hydrogen exchanger 2","regulation of pH [GO:0006885]","integral component of membrane [GO:0016021]","sodium:proton antiporter activity [GO:0015385]","integral component of membrane [GO:0016021]; sodium:proton antiporter activity [GO:0015385]; regulation of pH [GO:0006885]"]
[7,49041298,"SNP","G","A","splice_acceptor_variant","Vradi07g25660","chromatin structure-remodeling complex protein SYD","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","ATP binding [GO:0005524]; histone binding [GO:0042393]; nucleosome-dependent ATPase activity [GO:0070615]","nucleus [GO:0005634]; ATP binding [GO:0005524]; histone binding [GO:0042393]; nucleosome-dependent ATPase activity [GO:0070615]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,49049786,"SNP","A","G","splice_acceptor_variant","Vradi07g25660","chromatin structure-remodeling complex protein SYD","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","ATP binding [GO:0005524]; histone binding [GO:0042393]; nucleosome-dependent ATPase activity [GO:0070615]","nucleus [GO:0005634]; ATP binding [GO:0005524]; histone binding [GO:0042393]; nucleosome-dependent ATPase activity [GO:0070615]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,49059539,"INDEL","CAT","C","frameshift_variant","Vradi07g25670","-","-","-","-","-"]
[7,49074326,"INDEL","C","CCT","frameshift_variant","tRNA-Pro","-","-","-","-","-"]
[7,49091594,"INDEL","CATATCGA","C","frameshift_variant","Vradi07g25720","serine/arginine-rich SC35-like splicing factor SCL28 isoform X3","-","integral component of membrane [GO:0016021]","RNA binding [GO:0003723]","integral component of membrane [GO:0016021]; RNA binding [GO:0003723]"]
[7,49091606,"SNP","T","A","splice_acceptor_variant","Vradi07g25720","serine/arginine-rich SC35-like splicing factor SCL28 isoform X3","-","integral component of membrane [GO:0016021]","RNA binding [GO:0003723]","integral component of membrane [GO:0016021]; RNA binding [GO:0003723]"]
[7,49152849,"INDEL","ATTGGTTTACTTACCTC","A","splice_donor_variant","Vradi07g25750","uncharacterized protein At4g15545 isoform X1","-","-","-","-"]
[7,49204043,"INDEL","CTG","C","frameshift_variant&splice_donor_variant","Vradi07g25810","-","-","-","-","-"]
[7,49205334,"INDEL","A","AGTT","stop_gained","Vradi07g25810","-","-","-","-","-"]
[7,49346935,"SNP","A","G","start_lost","Vradi07g25900","-","-","-","-","-"]
[7,49349268,"SNP","C","A","splice_donor_variant","Vradi07g25910","endo-1,31,4-beta-D-glucanase","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[7,49352752,"INDEL","C","CT","frameshift_variant","Vradi07g25920","ribonucleoside-diphosphate reductase small chain A","deoxyribonucleotide biosynthetic process [GO:0009263]","-","oxidoreductase activity [GO:0016491]","oxidoreductase activity [GO:0016491]; deoxyribonucleotide biosynthetic process [GO:0009263]"]
[7,49380781,"INDEL","TA","T","frameshift_variant","Vradi07g25950","multiple RNA-binding domain-containing protein 1","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[7,49473361,"SNP","C","T","stop_gained","Vradi07g26030","basic 7S globulin isoform X1","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[7,49579259,"SNP","T","C","stop_lost","Vradi07g26160","GTP-binding protein EngA (GTPase Der)","ribosome biogenesis [GO:0042254]","-","GTP binding [GO:0005525]","GTP binding [GO:0005525]; ribosome biogenesis [GO:0042254]"]
[7,49618886,"INDEL","AT","A","frameshift_variant","Vradi07g26180","START domain-containing protein 10","-","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]"]
[7,49683084,"INDEL","C","CCT","frameshift_variant","Vradi07g26250","uncharacterized protein LOC106768415 isoform X1","-","-","-","-"]
[7,49712387,"SNP","G","A","stop_gained","Vradi07g26270","Hexosyltransferase (EC 2.4.1.-)","cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]","Golgi membrane [GO:0000139]","polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]","Golgi membrane [GO:0000139]; polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]; cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]"]
[7,49712515,"INDEL","C","CA","frameshift_variant","Vradi07g26270","Hexosyltransferase (EC 2.4.1.-)","cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]","Golgi membrane [GO:0000139]","polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]","Golgi membrane [GO:0000139]; polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]; cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]"]
[7,49819908,"SNP","C","A","stop_gained","Vradi07g26400","sister chromatid cohesion protein PDS5 homolog A isoform X4","cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; cell division [GO:0051301]; mitotic sister chromatid cohesion [GO:0007064]"]
[7,49856304,"SNP","T","C","start_lost","Vradi07g26430","uncharacterized protein LOC106767742","-","-","-","-"]
[7,49873198,"SNP","C","A","stop_gained","Vradi07g26450","oligopeptide transporter 3","protein transport [GO:0015031]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; protein transport [GO:0015031]; transmembrane transport [GO:0055085]"]
[7,49937425,"SNP","C","A","splice_donor_variant","Vradi07g26530","protein NAR1","-","-","-","-"]
[7,49947950,"SNP","C","A","splice_acceptor_variant","Vradi07g26550","glucan endo-1,3-beta-glucosidase 12 isoform X1","-","-","-","-"]
[7,50256923,"SNP","A","T","splice_acceptor_variant","Vradi07g26880","Leucyl-tRNA synthetase (EC 6.1.1.4)","leucyl-tRNA aminoacylation [GO:0006429]","-","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]; leucyl-tRNA aminoacylation [GO:0006429]"]
[7,50256942,"INDEL","ATCGGTCATTGAGGCATTTGTT","AT","frameshift_variant","Vradi07g26880","Leucyl-tRNA synthetase (EC 6.1.1.4)","leucyl-tRNA aminoacylation [GO:0006429]","-","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]; leucyl-tRNA aminoacylation [GO:0006429]"]
[7,50256964,"INDEL","T","TAC","frameshift_variant","Vradi07g26880","Leucyl-tRNA synthetase (EC 6.1.1.4)","leucyl-tRNA aminoacylation [GO:0006429]","-","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]; leucyl-tRNA aminoacylation [GO:0006429]"]
[7,50257003,"INDEL","C","CTA","frameshift_variant","Vradi07g26880","Leucyl-tRNA synthetase (EC 6.1.1.4)","leucyl-tRNA aminoacylation [GO:0006429]","-","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]; leucyl-tRNA aminoacylation [GO:0006429]"]
[7,50432815,"INDEL","GTAATGATACATGCATCATTAATACAT","G","splice_donor_variant","Vradi07g27090","tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase (EC 2.1.1.282) (EC 2.5.1.114) (tRNA(Phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-methyltransferase)","methylation [GO:0032259]; tRNA processing [GO:0008033]","-","methyltransferase activity [GO:0008168]; tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity [GO:0102522]","methyltransferase activity [GO:0008168]; tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity [GO:0102522]; methylation [GO:0032259]; tRNA processing [GO:0008033]"]
[7,50536171,"INDEL","GTGTATATAAACCAGTCTGCACTTAACACCATA","G","frameshift_variant&stop_lost&exon_loss_variant","Vradi07g27200","cardiolipin synthase (CMP-forming), mitochondrial","phospholipid biosynthetic process [GO:0008654]","membrane [GO:0016020]","phosphotransferase activity, for other substituted phosphate groups [GO:0016780]","membrane [GO:0016020]; phosphotransferase activity, for other substituted phosphate groups [GO:0016780]; phospholipid biosynthetic process [GO:0008654]"]
[7,50619659,"INDEL","CT","C","frameshift_variant","Vradi07g27300","survival of motor neuron-related-splicing factor 30","mRNA processing [GO:0006397]","cytoplasm [GO:0005737]; nucleus [GO:0005634]","RNA binding [GO:0003723]","cytoplasm [GO:0005737]; nucleus [GO:0005634]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]"]
[7,50944634,"INDEL","TC","T","frameshift_variant","Vradi07g27500","uncharacterized protein LOC111242007","-","-","-","-"]
[7,50947395,"INDEL","ACG","A","frameshift_variant","Vradi07g27510","FRIGIDA-like protein","cell differentiation [GO:0030154]; flower development [GO:0009908]","-","-","cell differentiation [GO:0030154]; flower development [GO:0009908]"]
[7,50947398,"INDEL","A","ATGT","stop_gained","Vradi07g27510","FRIGIDA-like protein","cell differentiation [GO:0030154]; flower development [GO:0009908]","-","-","cell differentiation [GO:0030154]; flower development [GO:0009908]"]
[7,51029157,"SNP","C","G","splice_donor_variant","Vradi07g27550","uncharacterized protein LOC106769412","-","-","-","-"]
[7,51098132,"SNP","C","A","stop_gained","Vradi07g27610","actin-related protein 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,51102520,"INDEL","TC","T","frameshift_variant","Vradi07g27610","actin-related protein 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,51102554,"INDEL","CA","C","frameshift_variant","Vradi07g27610","actin-related protein 4-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,51133058,"INDEL","AC","A","frameshift_variant","Vradi07g27630","DENN domain and WD repeat-containing protein SCD1 isoform X2","-","-","-","-"]
[7,51133409,"SNP","C","A","stop_gained","Vradi07g27630","DENN domain and WD repeat-containing protein SCD1 isoform X2","-","-","-","-"]
[7,51133591,"SNP","G","T","stop_gained","Vradi07g27630","DENN domain and WD repeat-containing protein SCD1 isoform X2","-","-","-","-"]
[7,51177232,"INDEL","GC","G","frameshift_variant","Vradi07g27670","lysM domain-containing GPI-anchored protein 1 isoform X1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,51245334,"INDEL","CTGTA","C","splice_acceptor_variant","Vradi07g27750","transcription factor BEE 3","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,51268793,"INDEL","A","AT","frameshift_variant","Vradi07g27780","-","-","-","-","-"]
[7,51296135,"INDEL","CT","C","splice_acceptor_variant","Vradi07g27810","zinc finger protein BRUTUS isoform X2","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[7,51331253,"SNP","G","T","splice_donor_variant","Vradi07g27850","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein serine/threonine kinase activity [GO:0004674]"]
[7,51365447,"INDEL","T","TAC","frameshift_variant","Vradi07g27880","aspartate--tRNA ligase, chloroplastic/mitochondrial","tRNA aminoacylation for protein translation [GO:0006418]","cytoplasm [GO:0005737]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; DNA binding [GO:0003677]","cytoplasm [GO:0005737]; aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; tRNA aminoacylation for protein translation [GO:0006418]"]
[7,51444788,"INDEL","AG","A","frameshift_variant","Vradi07g27970","(1->3)-beta-glucan endohydrolase (EC 3.2.1.39) (Beta-1,3-endoglucanase)","carbohydrate metabolic process [GO:0005975]","-","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]; carbohydrate metabolic process [GO:0005975]"]
[7,51444789,"INDEL","TAG","T","frameshift_variant","Vradi07g27970","(1->3)-beta-glucan endohydrolase (EC 3.2.1.39) (Beta-1,3-endoglucanase)","carbohydrate metabolic process [GO:0005975]","-","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]; carbohydrate metabolic process [GO:0005975]"]
[7,51465184,"INDEL","CTATT","C","frameshift_variant","Vradi07g27990","plant UBX domain-containing protein 2","DNA repair [GO:0006281]","-","DNA binding [GO:0003677]; metal ion binding [GO:0046872]","DNA binding [GO:0003677]; metal ion binding [GO:0046872]; DNA repair [GO:0006281]"]
[7,51518105,"SNP","G","A","stop_gained","Vradi07g28040","protein XAP5 CIRCADIAN TIMEKEEPER","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[7,51518331,"INDEL","TG","T","frameshift_variant&stop_lost","Vradi07g28040","protein XAP5 CIRCADIAN TIMEKEEPER","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[7,51661012,"INDEL","GTGTGAAAGCAACCTGTTGCATTTCATTCCCTCAAGAAACAAGCGCATCCC","G","frameshift_variant&splice_donor_variant","Vradi07g28190","MACPF domain-containing protein At1g14780","-","-","-","-"]
[7,51661172,"SNP","G","C","stop_gained","Vradi07g28190","MACPF domain-containing protein At1g14780","-","-","-","-"]
[7,52186323,"SNP","T","C","stop_lost","Vradi07g28470","transmembrane protein 234 homolog isoform X1","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[7,52189501,"INDEL","G","GTAAC","splice_donor_variant","Vradi07g28480","casein kinase 1-like protein 3","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[7,52193360,"INDEL","CTGACTTCAACAGGAGACAAGACTACTT","C","splice_acceptor_variant&splice_donor_variant","Vradi07g28480","casein kinase 1-like protein 3","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[7,52432277,"SNP","C","A","stop_gained","Vradi07g28700","Phosphotransferase (EC 2.7.1.-)","cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]","-","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]; cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]"]
[7,52432294,"SNP","A","T","start_lost","Vradi07g28700","Phosphotransferase (EC 2.7.1.-)","cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]","-","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]","ATP binding [GO:0005524]; glucose binding [GO:0005536]; hexokinase activity [GO:0004396]; cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]"]
[7,52464528,"INDEL","ACCATCATCATATAGGCTTAC","A","splice_donor_variant","Vradi07g28720","-","-","-","-","-"]
[7,52464550,"INDEL","T","TG","frameshift_variant","Vradi07g28720","-","-","-","-","-"]
[7,52464556,"INDEL","GTT","G","frameshift_variant","Vradi07g28720","-","-","-","-","-"]
[7,52531573,"SNP","T","G","splice_donor_variant","Vradi07g28780","putative dual specificity protein phosphatase DSP8","-","-","protein tyrosine/serine/threonine phosphatase activity [GO:0008138]; protein tyrosine phosphatase activity [GO:0004725]","protein tyrosine phosphatase activity [GO:0004725]; protein tyrosine/serine/threonine phosphatase activity [GO:0008138]"]
[7,52607979,"INDEL","AG","A","frameshift_variant","Vradi07g28830","Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)","inositol catabolic process [GO:0019310]; L-ascorbic acid biosynthetic process [GO:0019853]","cytoplasm [GO:0005737]","inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]","cytoplasm [GO:0005737]; inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]; inositol catabolic process [GO:0019310]; L-ascorbic acid biosynthetic process [GO:0019853]"]
[7,52608406,"SNP","C","T","splice_donor_variant","Vradi07g28830","Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)","inositol catabolic process [GO:0019310]; L-ascorbic acid biosynthetic process [GO:0019853]","cytoplasm [GO:0005737]","inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]","cytoplasm [GO:0005737]; inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]; inositol catabolic process [GO:0019310]; L-ascorbic acid biosynthetic process [GO:0019853]"]
[7,52639434,"SNP","C","T","splice_donor_variant","Vradi07g28860","-","-","-","-","-"]
[7,52647907,"SNP","C","T","stop_gained","Vradi07g28870","asparagine--tRNA ligase, cytoplasmic 1-like isoform X2","tRNA aminoacylation for protein translation [GO:0006418]","-","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; tRNA aminoacylation for protein translation [GO:0006418]"]
[7,52648348,"SNP","G","T","splice_donor_variant","Vradi07g28870","asparagine--tRNA ligase, cytoplasmic 1-like isoform X2","tRNA aminoacylation for protein translation [GO:0006418]","-","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; tRNA aminoacylation for protein translation [GO:0006418]"]
[7,52648670,"INDEL","AC","A","frameshift_variant","Vradi07g28870","asparagine--tRNA ligase, cytoplasmic 1-like isoform X2","tRNA aminoacylation for protein translation [GO:0006418]","-","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; tRNA aminoacylation for protein translation [GO:0006418]"]
[7,52767240,"INDEL","A","AAT","splice_donor_variant","Vradi07g29020","K(+) efflux antiporter 4 isoform X1","-","integral component of membrane [GO:0016021]","solute:proton antiporter activity [GO:0015299]","integral component of membrane [GO:0016021]; solute:proton antiporter activity [GO:0015299]"]
[7,52767241,"SNP","C","A","splice_donor_variant","Vradi07g29020","K(+) efflux antiporter 4 isoform X1","-","integral component of membrane [GO:0016021]","solute:proton antiporter activity [GO:0015299]","integral component of membrane [GO:0016021]; solute:proton antiporter activity [GO:0015299]"]
[7,52767279,"SNP","T","A","stop_gained","Vradi07g29020","K(+) efflux antiporter 4 isoform X1","-","integral component of membrane [GO:0016021]","solute:proton antiporter activity [GO:0015299]","integral component of membrane [GO:0016021]; solute:proton antiporter activity [GO:0015299]"]
[7,52784806,"INDEL","CCT","C","frameshift_variant","Vradi07g29050","Cytidine deaminase (EC 3.5.4.5)","-","-","cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]","cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]"]
[7,52784919,"INDEL","C","CG","frameshift_variant","Vradi07g29050","Cytidine deaminase (EC 3.5.4.5)","-","-","cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]","cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]"]
[7,52916792,"SNP","C","T","stop_gained","Vradi07g29190","tRNA pseudouridine synthase (EC 5.4.99.12)","pseudouridine synthesis [GO:0001522]; tRNA processing [GO:0008033]","-","RNA binding [GO:0003723]; tRNA pseudouridine synthase activity [GO:0106029]","RNA binding [GO:0003723]; tRNA pseudouridine synthase activity [GO:0106029]; pseudouridine synthesis [GO:0001522]; tRNA processing [GO:0008033]"]
[7,53023670,"SNP","C","T","stop_gained","Vradi07g29280","WD repeat-containing protein 44","-","-","-","-"]
[7,53024646,"SNP","G","T","splice_acceptor_variant","Vradi07g29280","WD repeat-containing protein 44","-","-","-","-"]
[7,53024706,"SNP","G","T","stop_gained","Vradi07g29280","WD repeat-containing protein 44","-","-","-","-"]
[7,53024893,"INDEL","GGGTACAATTGTGGGTACCAT","G","frameshift_variant","Vradi07g29280","WD repeat-containing protein 44","-","-","-","-"]
[7,53025554,"SNP","C","T","stop_gained","Vradi07g29280","WD repeat-containing protein 44","-","-","-","-"]
[7,53026191,"INDEL","AGGCT","A","splice_acceptor_variant","Vradi07g29280","WD repeat-containing protein 44","-","-","-","-"]
[7,53210184,"SNP","G","T","splice_donor_variant","Vradi07g29470","uncharacterized protein LOC106766823","-","-","calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]"]
[7,53221037,"INDEL","GAA","G","frameshift_variant","Vradi07g29480","1-phosphatidylinositol 4-kinase (EC 2.7.1.67)","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[7,53221046,"INDEL","CG","C","frameshift_variant","Vradi07g29480","1-phosphatidylinositol 4-kinase (EC 2.7.1.67)","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[7,53221049,"INDEL","GGTGAAAA","G","frameshift_variant","Vradi07g29480","1-phosphatidylinositol 4-kinase (EC 2.7.1.67)","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[7,53221099,"INDEL","GCACTCTTATC","G","frameshift_variant","Vradi07g29480","1-phosphatidylinositol 4-kinase (EC 2.7.1.67)","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[7,53344734,"SNP","T","A","splice_acceptor_variant","Vradi07g29630","uncharacterized protein LOC106767261","-","-","-","-"]
[7,53372041,"INDEL","A","AC","splice_donor_variant","Vradi07g29660","high mobility group B protein 6","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[7,53638001,"SNP","G","T","stop_gained","Vradi07g29890","Auxin response factor","auxin-activated signaling pathway [GO:0009734]; regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; auxin-activated signaling pathway [GO:0009734]; regulation of transcription, DNA-templated [GO:0006355]"]
[7,54142769,"SNP","G","A","stop_gained","Vradi07g30310","putative DEAD-box ATP-dependent RNA helicase 33","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[7,55310983,"SNP","G","A","stop_gained","Vradi07g31270","MACPF domain-containing protein At4g24290","-","-","-","-"]
[7,55311052,"INDEL","T","TGTTGGAA","frameshift_variant","Vradi07g31270","MACPF domain-containing protein At4g24290","-","-","-","-"]
[7,55313500,"INDEL","TGGTG","T","frameshift_variant","Vradi07g31270","MACPF domain-containing protein At4g24290","-","-","-","-"]
[7,55313727,"SNP","T","G","stop_gained","Vradi07g31270","MACPF domain-containing protein At4g24290","-","-","-","-"]
[7,55413906,"INDEL","A","ATCTGTGTTCACTATCTATGGAGCGGAGTGACTATCCTGAATCCCCTCTTCCCTATCTCCCCCTTGCCTTTTTTTATTTTTCTCGCCGGCAGATAGTTGACTT","stop_gained","Vradi07g31360","filament-like plant protein 3","-","-","-","-"]
[7,55463291,"INDEL","T","TA","frameshift_variant&stop_gained","Vradi07g31400","Aldehyde dehydrogenase","cellular aldehyde metabolic process [GO:0006081]","-","oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]","oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]; cellular aldehyde metabolic process [GO:0006081]"]
[7,55545907,"SNP","T","C","splice_acceptor_variant","Vradi07g31450","uncharacterized protein LOC111241979","-","-","-","-"]
[7,55585854,"INDEL","AG","A","frameshift_variant","Vradi07g31470","-","-","-","-","-"]
[8,193052,"SNP","A","G","splice_acceptor_variant","Vradi08g00120","Acylaminoacyl-peptidase (EC 3.4.19.1)","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[8,197430,"INDEL","GTAAA","G","splice_donor_variant","Vradi08g00120","Acylaminoacyl-peptidase (EC 3.4.19.1)","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[8,350165,"INDEL","A","ATATATGTGTGTGTGTGTGTGTG","frameshift_variant&start_lost","Vradi08g00230","-","-","-","-","-"]
[8,350168,"INDEL","G","GT","frameshift_variant","Vradi08g00230","-","-","-","-","-"]
[8,408668,"INDEL","TG","T","frameshift_variant","Vradi08g00300","CCR4-NOT transcription complex subunit 11","gene silencing by RNA [GO:0031047]","CCR4-NOT complex [GO:0030014]; cytoplasm [GO:0005737]; nucleus [GO:0005634]","-","CCR4-NOT complex [GO:0030014]; cytoplasm [GO:0005737]; nucleus [GO:0005634]; gene silencing by RNA [GO:0031047]"]
[8,408773,"SNP","G","A","splice_acceptor_variant","Vradi08g00300","CCR4-NOT transcription complex subunit 11","gene silencing by RNA [GO:0031047]","CCR4-NOT complex [GO:0030014]; cytoplasm [GO:0005737]; nucleus [GO:0005634]","-","CCR4-NOT complex [GO:0030014]; cytoplasm [GO:0005737]; nucleus [GO:0005634]; gene silencing by RNA [GO:0031047]"]
[8,815222,"SNP","C","T","stop_gained","Vradi08g00560","protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[8,947545,"INDEL","G","GA","frameshift_variant&start_lost","Vradi08g00690","uncharacterized protein LOC106769860","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,960965,"SNP","A","G","splice_donor_variant","Vradi08g00710","DNA repair protein RAD5B isoform X3","-","-","ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; nucleosome-dependent ATPase activity [GO:0070615]; zinc ion binding [GO:0008270]","ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; nucleosome-dependent ATPase activity [GO:0070615]; zinc ion binding [GO:0008270]"]
[8,1050199,"INDEL","T","TTA","frameshift_variant&stop_gained","Vradi08g00770","pectinesterase inhibitor 1","-","-","pectinesterase inhibitor activity [GO:0046910]","pectinesterase inhibitor activity [GO:0046910]"]
[8,1199387,"SNP","C","T","stop_gained","Vradi08g00880","protein argonaute 10 isoform X2","-","-","-","-"]
[8,1508030,"INDEL","G","GTTTCAGAT","frameshift_variant","Vradi08g01080","Signal peptidase complex subunit 3 (EC 3.4.-.-) (Microsomal signal peptidase 22 kDa subunit)","protein targeting to ER [GO:0045047]; signal peptide processing [GO:0006465]","integral component of membrane [GO:0016021]; signal peptidase complex [GO:0005787]","peptidase activity [GO:0008233]","integral component of membrane [GO:0016021]; signal peptidase complex [GO:0005787]; peptidase activity [GO:0008233]; protein targeting to ER [GO:0045047]; signal peptide processing [GO:0006465]"]
[8,1572073,"INDEL","AGATGCAGATTGTGACATCCTCCTTTGAGC","A","frameshift_variant","Vradi08g01130","BEL1-like homeodomain protein 1","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[8,1572104,"INDEL","AGTTGCAGGGATTGGTTCTGCGAGGACGTACACAGCACT","A","frameshift_variant","Vradi08g01130","BEL1-like homeodomain protein 1","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]; regulation of transcription, DNA-templated [GO:0006355]"]
[8,1582101,"INDEL","TATAGTATTATAGTTGTTGTTTTCCAACTGATATGCATATCTCGTCATTGTAAAGTAATATCAACAAAACAAAAGGTATAATAGAGTATTTATGTTTTGTATATATGTTCTTAATATTACAGACAAA","T","frameshift_variant&splice_acceptor_variant","Vradi08g01140","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","ubiquitin-protein transferase activity [GO:0004842]","ubiquitin-protein transferase activity [GO:0004842]"]
[8,1704902,"SNP","T","C","stop_lost","Vradi08g01210","Nuclear transcription factor Y subunit","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[8,1727494,"INDEL","GGTTACTTCGATCCCCAAAAGAAACTATACCAATCTCTAATATCAAAATTGAGAAAACAAACAGA","GAACAGA","splice_donor_variant","Vradi08g01220","uncharacterized protein LOC106769843","peptidyl-diphthamide biosynthetic process from peptidyl-histidine [GO:0017183]","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]; peptidyl-diphthamide biosynthetic process from peptidyl-histidine [GO:0017183]"]
[8,2031539,"INDEL","GCACT","G","frameshift_variant","Vradi08g01410","myosin-binding protein 7-like","-","-","-","-"]
[8,2031545,"INDEL","GCAATGGCAAGTGAGGCA","G","frameshift_variant","Vradi08g01410","myosin-binding protein 7-like","-","-","-","-"]
[8,2056911,"INDEL","GGTGCC","G","frameshift_variant","Vradi08g01430","-","-","-","-","-"]
[8,2099337,"INDEL","TG","T","frameshift_variant","Vradi08g01460","-","-","-","-","-"]
[8,2403323,"SNP","T","A","stop_gained","Vradi08g01570","serine/arginine-rich SC35-like splicing factor SCL33 isoform X3","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[8,2420461,"SNP","T","C","splice_donor_variant","Vradi08g01580","uncharacterized protein LOC106771255","-","-","-","-"]
[8,2451343,"SNP","C","T","splice_acceptor_variant","Vradi08g01610","-","-","-","-","-"]
[8,2500032,"SNP","C","T","stop_gained","Vradi08g01650","-","-","-","-","-"]
[8,2521747,"SNP","T","C","start_lost","Vradi08g01660","Dirigent protein","-","apoplast [GO:0048046]","-","apoplast [GO:0048046]"]
[8,2588072,"SNP","T","C","splice_donor_variant","Vradi08g01690","Kinesin-like protein","microtubule-based movement [GO:0007018]","microtubule [GO:0005874]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","microtubule [GO:0005874]; ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,2659288,"INDEL","G","GA","frameshift_variant","Vradi08g01720","uncharacterized protein LOC111242347","phloem development [GO:0010088]","-","-","phloem development [GO:0010088]"]
[8,2802814,"INDEL","TGA","T","frameshift_variant","Vradi08g01770","probable L-type lectin-domain containing receptor kinase S.5","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]"]
[8,2802817,"INDEL","C","CGT","frameshift_variant","Vradi08g01770","probable L-type lectin-domain containing receptor kinase S.5","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]"]
[8,2822801,"INDEL","TGA","T","frameshift_variant","Vradi08g01790","probable L-type lectin-domain containing receptor kinase S.5","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]"]
[8,2822804,"INDEL","C","CGT","frameshift_variant","Vradi08g01790","probable L-type lectin-domain containing receptor kinase S.5","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]"]
[8,2838311,"INDEL","TC","T","frameshift_variant","Vradi08g01810","-","-","-","-","-"]
[8,2838997,"INDEL","G","GA","frameshift_variant","Vradi08g01810","-","-","-","-","-"]
[8,2840148,"INDEL","T","TAG","frameshift_variant","Vradi08g01810","-","-","-","-","-"]
[8,2840181,"INDEL","AT","A","frameshift_variant","Vradi08g01810","-","-","-","-","-"]
[8,2920612,"INDEL","C","CTGCAATTAACAGAAAGTTTTGTTGCACACTTT","splice_acceptor_variant","Vradi08g01870","omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 isoform X2","lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]","oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [GO:0016717]","integral component of membrane [GO:0016021]; oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [GO:0016717]; lipid metabolic process [GO:0006629]"]
[8,2978449,"INDEL","CA","C","frameshift_variant","Vradi08g01920","-","-","-","-","-"]
[8,3057848,"INDEL","C","CA","frameshift_variant","Vradi08g01960","uncharacterized protein LOC111242655 isoform X2","-","-","-","-"]
[8,3087917,"INDEL","TTG","T","frameshift_variant","Vradi08g01980","probable transcription factor KAN4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[8,3087919,"INDEL","A","ACG","frameshift_variant","Vradi08g01980","probable transcription factor KAN4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[8,3088284,"SNP","A","G","splice_acceptor_variant","Vradi08g01980","probable transcription factor KAN4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[8,3088325,"INDEL","T","TGA","frameshift_variant","Vradi08g01980","probable transcription factor KAN4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[8,3088330,"INDEL","TGC","T","frameshift_variant","Vradi08g01980","probable transcription factor KAN4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[8,3088375,"INDEL","G","GCAGGGACTAGGATTCACGATGA","frameshift_variant&stop_gained","Vradi08g01980","probable transcription factor KAN4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[8,3100849,"SNP","A","T","splice_donor_variant","Vradi08g01990","-","-","-","-","-"]
[8,3193385,"SNP","*","C","frameshift_variant","Vradi08g02080","FT-interacting protein 1","cellular protein localization [GO:0034613]; long-day photoperiodism, flowering [GO:0048574]; positive regulation of flower development [GO:0009911]","integral component of membrane [GO:0016021]; plasmodesmatal endoplasmic reticulum [GO:0009511]","-","integral component of membrane [GO:0016021]; plasmodesmatal endoplasmic reticulum [GO:0009511]; cellular protein localization [GO:0034613]; long-day photoperiodism, flowering [GO:0048574]; positive regulation of flower development [GO:0009911]"]
[8,3355834,"INDEL","TGACA","T","frameshift_variant","Vradi08g02160","amino acid transporter AVT1A","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]","integral component of membrane [GO:0016021]; symporter activity [GO:0015293]; amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]"]
[8,3355863,"INDEL","TTG","T","frameshift_variant","Vradi08g02160","amino acid transporter AVT1A","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]","integral component of membrane [GO:0016021]; symporter activity [GO:0015293]; amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]"]
[8,3355985,"SNP","C","T","stop_gained","Vradi08g02160","amino acid transporter AVT1A","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]","integral component of membrane [GO:0016021]; symporter activity [GO:0015293]; amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]"]
[8,3912537,"INDEL","AGTCATTACC","A","frameshift_variant&splice_donor_variant","Vradi08g02440","Protein N-terminal glutamine amidohydrolase (EC 3.5.1.122) (Protein NH2-terminal glutamine deamidase)","-","-","protein-N-terminal asparagine amidohydrolase activity [GO:0008418]; protein-N-terminal glutamine amidohydrolase activity [GO:0070773]","protein-N-terminal asparagine amidohydrolase activity [GO:0008418]; protein-N-terminal glutamine amidohydrolase activity [GO:0070773]"]
[8,3989514,"INDEL","A","AT","frameshift_variant&start_lost","Vradi08g02490","shikimate O-hydroxycinnamoyltransferase","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[8,4211859,"SNP","T","C","start_lost","Vradi08g02570","-","-","-","-","-"]
[8,4211942,"INDEL","ATTAC","A","frameshift_variant","Vradi08g02570","-","-","-","-","-"]
[8,4233934,"INDEL","G","GCCACGAATATCAACTATAAAACAAAAAACA","stop_gained","Vradi08g02580","uncharacterized protein LOC106771447","-","-","-","-"]
[8,4237258,"INDEL","G","GC","frameshift_variant","Vradi08g02580","uncharacterized protein LOC106771447","-","-","-","-"]
[8,4459192,"INDEL","A","AC","frameshift_variant","Vradi08g02740","Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (Tetrahydrofolylpolyglutamate synthase)","one-carbon metabolic process [GO:0006730]","-","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; tetrahydrofolylpolyglutamate synthase activity [GO:0004326]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; tetrahydrofolylpolyglutamate synthase activity [GO:0004326]; one-carbon metabolic process [GO:0006730]"]
[8,4750220,"SNP","G","A","splice_donor_variant","Vradi08g02930","uncharacterized protein LOC106771565","-","-","-","-"]
[8,4892888,"INDEL","GA","G","frameshift_variant","Vradi08g02980","-","-","-","-","-"]
[8,4892891,"INDEL","AGC","A","frameshift_variant","Vradi08g02980","-","-","-","-","-"]
[8,4892895,"INDEL","AG","A","frameshift_variant","Vradi08g02980","-","-","-","-","-"]
[8,4892897,"SNP","C","T","stop_gained","Vradi08g02980","-","-","-","-","-"]
[8,4892899,"INDEL","AG","A","frameshift_variant","Vradi08g02980","-","-","-","-","-"]
[8,5180943,"INDEL","A","AG","frameshift_variant","Vradi08g03150","-","-","-","-","-"]
[8,5180975,"INDEL","GC","G","frameshift_variant","Vradi08g03150","-","-","-","-","-"]
[8,5514003,"INDEL","AGC","A","frameshift_variant","Vradi08g03310","R3H domain-containing protein 1","-","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]"]
[8,5514011,"SNP","T","A","stop_gained","Vradi08g03310","R3H domain-containing protein 1","-","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]"]
[8,5671763,"INDEL","A","ACTTTT","frameshift_variant","Vradi08g03380","-","-","-","-","-"]
[8,5671868,"INDEL","G","GTCATAATAATAT","splice_donor_variant","Vradi08g03380","-","-","-","-","-"]
[8,5677166,"SNP","A","T","stop_gained","Vradi08g03380","-","-","-","-","-"]
[8,5681135,"INDEL","TCTCACGAAAGTCCTTCA","T","frameshift_variant","Vradi08g03390","O-fucosyltransferase family protein","fucose metabolic process [GO:0006004]","-","transferase activity [GO:0016740]","transferase activity [GO:0016740]; fucose metabolic process [GO:0006004]"]
[8,5684543,"INDEL","A","ACGTTGT","splice_donor_variant","Vradi08g03390","O-fucosyltransferase family protein","fucose metabolic process [GO:0006004]","-","transferase activity [GO:0016740]","transferase activity [GO:0016740]; fucose metabolic process [GO:0006004]"]
[8,5750331,"INDEL","TCCGACATC","T","frameshift_variant","Vradi08g03420","transcription factor bHLH106","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]"]
[8,5750379,"SNP","A","T","stop_gained","Vradi08g03420","transcription factor bHLH106","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]"]
[8,5750389,"INDEL","C","CCT","frameshift_variant","Vradi08g03420","transcription factor bHLH106","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]"]
[8,5789850,"INDEL","TGCTTA","T","frameshift_variant","Vradi08g03450","-","-","-","-","-"]
[8,5790121,"SNP","G","A","stop_gained","Vradi08g03450","-","-","-","-","-"]
[8,5957539,"SNP","G","A","stop_gained","Vradi08g03510","Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial (EC 2.3.1.234) (Glycoprotease 1) (N6-L-threonylcarbamoyladenine synthase) (t(6)A37 threonylcarbamoyladenosine biosynthesis protein LOC106772545) (tRNA threonylcarbamoyladenosine biosynthesis protein LOC106772545) (t(6)A synthase)","tRNA threonylcarbamoyladenosine modification [GO:0002949]","mitochondrion [GO:0005739]","metal ion binding [GO:0046872]; N(6)-L-threonylcarbamoyladenine synthase activity [GO:0061711]","mitochondrion [GO:0005739]; metal ion binding [GO:0046872]; N(6)-L-threonylcarbamoyladenine synthase activity [GO:0061711]; tRNA threonylcarbamoyladenosine modification [GO:0002949]"]
[8,6021282,"SNP","A","G","splice_acceptor_variant","Vradi08g03540","urease accessory protein D isoform X1","nitrogen compound metabolic process [GO:0006807]","-","nickel cation binding [GO:0016151]","nickel cation binding [GO:0016151]; nitrogen compound metabolic process [GO:0006807]"]
[8,6063463,"SNP","A","T","splice_donor_variant","Vradi08g03550","L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase","-","-","holo-[acyl-carrier-protein] synthase activity [GO:0008897]; magnesium ion binding [GO:0000287]","holo-[acyl-carrier-protein] synthase activity [GO:0008897]; magnesium ion binding [GO:0000287]"]
[8,6074379,"SNP","G","C","stop_gained","Vradi08g03560","-","-","-","-","-"]
[8,6242293,"SNP","T","C","splice_donor_variant","Vradi08g03660","serine/threonine-protein kinase TIO isoform X1","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,6645818,"INDEL","AACTC","A","frameshift_variant","Vradi08g03840","LRR receptor-like serine/threonine-protein kinase GSO1","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,6712652,"INDEL","G","GTAAT","splice_donor_variant","Vradi08g03860","Flavin-containing monooxygenase (EC 1.-.-.-)","-","-","flavin adenine dinucleotide binding [GO:0050660]; N,N-dimethylaniline monooxygenase activity [GO:0004499]; NADP binding [GO:0050661]","flavin adenine dinucleotide binding [GO:0050660]; N,N-dimethylaniline monooxygenase activity [GO:0004499]; NADP binding [GO:0050661]"]
[8,6746772,"SNP","C","A","splice_donor_variant","Vradi08g03870","7-hydroxymethyl chlorophyll a reductase, chloroplastic","-","-","-","-"]
[8,6746828,"INDEL","CA","C","frameshift_variant","Vradi08g03870","7-hydroxymethyl chlorophyll a reductase, chloroplastic","-","-","-","-"]
[8,6756745,"SNP","G","T","stop_gained","Vradi08g03880","protein BLISTER isoform X1","regulation of growth [GO:0040008]","-","-","regulation of growth [GO:0040008]"]
[8,6824297,"INDEL","A","AGGGTTAGTAT","splice_acceptor_variant","Vradi08g03920","-","-","-","-","-"]
[8,6871625,"SNP","A","C","stop_gained","Vradi08g03980","uncharacterized protein LOC106771350 isoform X2","-","-","-","-"]
[8,6875484,"SNP","C","T","splice_donor_variant","Vradi08g03980","uncharacterized protein LOC106771350 isoform X2","-","-","-","-"]
[8,6875559,"INDEL","C","CA","frameshift_variant","Vradi08g03980","uncharacterized protein LOC106771350 isoform X2","-","-","-","-"]
[8,6875561,"INDEL","G","GAACACCACAA","frameshift_variant","Vradi08g03980","uncharacterized protein LOC106771350 isoform X2","-","-","-","-"]
[8,7048158,"SNP","T","C","splice_donor_variant","Vradi08g04040","-","-","-","-","-"]
[8,7080176,"INDEL","T","TG","frameshift_variant","Vradi08g04050","probable voltage-gated potassium channel subunit beta","potassium ion transport [GO:0006813]; regulation of ion transmembrane transport [GO:0034765]","-","D-threo-aldose 1-dehydrogenase activity [GO:0047834]; voltage-gated ion channel activity [GO:0005244]","D-threo-aldose 1-dehydrogenase activity [GO:0047834]; voltage-gated ion channel activity [GO:0005244]; potassium ion transport [GO:0006813]; regulation of ion transmembrane transport [GO:0034765]"]
[8,7080279,"SNP","T","A","splice_acceptor_variant","Vradi08g04050","probable voltage-gated potassium channel subunit beta","potassium ion transport [GO:0006813]; regulation of ion transmembrane transport [GO:0034765]","-","D-threo-aldose 1-dehydrogenase activity [GO:0047834]; voltage-gated ion channel activity [GO:0005244]","D-threo-aldose 1-dehydrogenase activity [GO:0047834]; voltage-gated ion channel activity [GO:0005244]; potassium ion transport [GO:0006813]; regulation of ion transmembrane transport [GO:0034765]"]
[8,7081251,"INDEL","G","GCT","frameshift_variant","Vradi08g04050","probable voltage-gated potassium channel subunit beta","potassium ion transport [GO:0006813]; regulation of ion transmembrane transport [GO:0034765]","-","D-threo-aldose 1-dehydrogenase activity [GO:0047834]; voltage-gated ion channel activity [GO:0005244]","D-threo-aldose 1-dehydrogenase activity [GO:0047834]; voltage-gated ion channel activity [GO:0005244]; potassium ion transport [GO:0006813]; regulation of ion transmembrane transport [GO:0034765]"]
[8,7112072,"INDEL","GAATTTCACCAGAA","G","splice_donor_variant","Vradi08g04070","uncharacterized protein LOC106772468","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[8,7172522,"SNP","A","C","splice_acceptor_variant","Vradi08g04080","uncharacterized protein LOC106772276","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7192326,"SNP","G","A","stop_gained","Vradi08g04090","-","-","-","-","-"]
[8,7339919,"SNP","A","T","splice_acceptor_variant","Vradi08g04140","-","-","-","-","-"]
[8,7340023,"SNP","C","T","stop_gained","Vradi08g04140","-","-","-","-","-"]
[8,7340146,"INDEL","A","AGGGAG","frameshift_variant","Vradi08g04140","-","-","-","-","-"]
[8,7340150,"INDEL","A","ATTAGCGAGATGAAGAAAGAGT","stop_gained","Vradi08g04140","-","-","-","-","-"]
[8,7340155,"INDEL","T","TA","frameshift_variant","Vradi08g04140","-","-","-","-","-"]
[8,7340157,"INDEL","G","GC","frameshift_variant","Vradi08g04140","-","-","-","-","-"]
[8,7340159,"INDEL","A","AGCAGAATT","frameshift_variant&stop_gained","Vradi08g04140","-","-","-","-","-"]
[8,7340376,"SNP","T","C","splice_donor_variant","Vradi08g04140","-","-","-","-","-"]
[8,7340544,"SNP","C","T","stop_gained","Vradi08g04140","-","-","-","-","-"]
[8,7340598,"SNP","C","T","stop_gained","Vradi08g04140","-","-","-","-","-"]
[8,7340787,"SNP","C","T","stop_gained","Vradi08g04140","-","-","-","-","-"]
[8,7341202,"INDEL","AC","A","frameshift_variant","Vradi08g04140","-","-","-","-","-"]
[8,7341232,"SNP","G","A","splice_donor_variant","Vradi08g04140","-","-","-","-","-"]
[8,7360716,"SNP","C","T","stop_gained","Vradi08g04160","-","-","-","-","-"]
[8,7519523,"INDEL","T","TGG","frameshift_variant","Vradi08g04210","protein NRT1/ PTR FAMILY 8.1-like","oligopeptide transport [GO:0006857]","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]; oligopeptide transport [GO:0006857]"]
[8,7628410,"SNP","C","T","splice_acceptor_variant","Vradi08g04240","probable ubiquitin carboxyl-terminal hydrolase MINDY-4","-","-","Lys48-specific deubiquitinase activity [GO:1990380]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","Lys48-specific deubiquitinase activity [GO:1990380]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]"]
[8,7628817,"SNP","T","A","stop_gained","Vradi08g04240","probable ubiquitin carboxyl-terminal hydrolase MINDY-4","-","-","Lys48-specific deubiquitinase activity [GO:1990380]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]","Lys48-specific deubiquitinase activity [GO:1990380]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]"]
[8,7856945,"INDEL","T","TGATCAAACGCA","frameshift_variant","Vradi08g04280","-","-","-","-","-"]
[8,7857186,"INDEL","T","TG","frameshift_variant","Vradi08g04280","-","-","-","-","-"]
[8,7932220,"INDEL","GATGT","G","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7932226,"SNP","A","T","stop_gained","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7932228,"INDEL","C","CT","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7932232,"SNP","G","C","stop_gained","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7932848,"INDEL","CA","C","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7932956,"SNP","G","A","stop_gained","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7933081,"INDEL","TGA","T","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7933102,"INDEL","CAA","C","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7933105,"INDEL","T","TTC","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7933219,"INDEL","T","TGA","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7933221,"INDEL","AGG","A","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7933229,"INDEL","T","TG","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7933334,"SNP","G","A","stop_gained","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7934640,"SNP","A","T","stop_gained","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7934996,"INDEL","T","TA","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7935001,"INDEL","TC","T","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7935074,"INDEL","TTAAA","T","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7935243,"INDEL","TC","T","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,7935351,"INDEL","A","AGCGT","frameshift_variant","Vradi08g04290","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,8289874,"INDEL","T","TC","frameshift_variant","Vradi08g04390","uncharacterized protein LOC111242357","-","-","-","-"]
[8,8294674,"INDEL","GCTTGGTTATGAACACCTTCAAACAAAGCAACAGCGCAGAAGGAACAATGCAAGT","G","splice_acceptor_variant","Vradi08g04400","LOW QUALITY PROTEIN: uncharacterized protein At4g19900","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,8314221,"SNP","T","C","stop_lost","Vradi08g04410","probable LRR receptor-like serine/threonine-protein kinase At3g47570 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1) (probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,8394985,"SNP","A","T","stop_gained","Vradi08g04460","Protein-serine/threonine phosphatase (EC 3.1.3.16)","dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]","nucleus [GO:0005634]","protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]; RNA binding [GO:0003723]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]","nucleus [GO:0005634]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]; RNA binding [GO:0003723]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]; dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]"]
[8,8394993,"INDEL","G","GACGACGCT","frameshift_variant","Vradi08g04460","Protein-serine/threonine phosphatase (EC 3.1.3.16)","dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]","nucleus [GO:0005634]","protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]; RNA binding [GO:0003723]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]","nucleus [GO:0005634]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]; RNA binding [GO:0003723]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]; dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]"]
[8,8460742,"SNP","G","A","stop_gained","Vradi08g04500","uncharacterized protein LOC106771323","-","-","-","-"]
[8,8529657,"INDEL","CG","C","frameshift_variant","Vradi08g04520","uncharacterized protein LOC111240920","-","-","-","-"]
[8,8529659,"INDEL","AAGGTTCGTTCTCG","A","frameshift_variant&splice_donor_variant","Vradi08g04520","uncharacterized protein LOC111240920","-","-","-","-"]
[8,8529988,"SNP","G","A","stop_gained","Vradi08g04520","uncharacterized protein LOC111240920","-","-","-","-"]
[8,8530254,"INDEL","GAA","G","frameshift_variant","Vradi08g04520","uncharacterized protein LOC111240920","-","-","-","-"]
[8,8530258,"INDEL","TTGTTGAGGAAGAGGC","TCGTGTTGAGGAAGAGGC","frameshift_variant","Vradi08g04520","uncharacterized protein LOC111240920","-","-","-","-"]
[8,8627888,"INDEL","GA","G","frameshift_variant","Vradi08g04560","LIMR family protein At5g01460","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,8628044,"SNP","A","G","splice_acceptor_variant","Vradi08g04560","LIMR family protein At5g01460","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,8758577,"SNP","C","T","splice_acceptor_variant","Vradi08g04590","-","-","-","-","-"]
[8,9333913,"SNP","A","C","splice_acceptor_variant","Vradi08g04850","probable carboxylesterase 18","-","-","-","-"]
[8,9428527,"INDEL","ACATC","A","frameshift_variant","Vradi08g04880","leucine-rich repeat receptor protein kinase EMS1-like","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9429753,"SNP","C","A","stop_gained","Vradi08g04880","leucine-rich repeat receptor protein kinase EMS1-like","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9430414,"SNP","*","G","frameshift_variant","Vradi08g04880","leucine-rich repeat receptor protein kinase EMS1-like","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9430418,"INDEL","AT","A","frameshift_variant","Vradi08g04880","leucine-rich repeat receptor protein kinase EMS1-like","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9430446,"SNP","T","A","stop_gained","Vradi08g04880","leucine-rich repeat receptor protein kinase EMS1-like","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9430455,"INDEL","TGG","T","frameshift_variant","Vradi08g04880","leucine-rich repeat receptor protein kinase EMS1-like","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9527193,"INDEL","GAGGA","G","frameshift_variant","Vradi08g04900","-","-","-","-","-"]
[8,9527199,"INDEL","T","TCCAC","frameshift_variant","Vradi08g04900","-","-","-","-","-"]
[8,9528290,"INDEL","ACTTG","A","frameshift_variant","Vradi08g04900","-","-","-","-","-"]
[8,9528319,"INDEL","G","GGT","frameshift_variant","Vradi08g04900","-","-","-","-","-"]
[8,9528322,"INDEL","CCT","C","frameshift_variant","Vradi08g04900","-","-","-","-","-"]
[8,9528537,"INDEL","GA","G","frameshift_variant","Vradi08g04900","-","-","-","-","-"]
[8,9528649,"SNP","C","T","stop_gained","Vradi08g04900","-","-","-","-","-"]
[8,9588836,"INDEL","TCA","T","frameshift_variant","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9588839,"INDEL","TC","T","frameshift_variant","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9589334,"SNP","C","A","stop_gained","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9589521,"INDEL","TGTAATGGTCC","T","frameshift_variant","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9589533,"INDEL","TTGCCAGCATGGTTGGGACAGCTTGAA","T","frameshift_variant","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9589629,"INDEL","C","CT","frameshift_variant","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9590701,"INDEL","TA","TGA","frameshift_variant","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9590704,"INDEL","AC","A","frameshift_variant","Vradi08g04920","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]"]
[8,9735355,"SNP","T","A","stop_gained","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,9736081,"INDEL","GAGAA","G","frameshift_variant","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,9736087,"INDEL","T","TCCAC","frameshift_variant","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,9736304,"SNP","G","T","stop_gained","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,9736435,"SNP","C","A","stop_gained","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,9738085,"INDEL","T","TG","frameshift_variant","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,9739558,"INDEL","AGATCAAGGTTGG","A","frameshift_variant&splice_acceptor_variant","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,9740428,"SNP","T","C","stop_lost","Vradi08g04940","uncharacterized protein LOC111242288","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]","integral component of membrane [GO:0016021]; zinc ion binding [GO:0008270]"]
[8,10030230,"INDEL","G","GT","frameshift_variant","Vradi08g05050","-","-","-","-","-"]
[8,10030381,"SNP","T","C","splice_acceptor_variant","Vradi08g05050","-","-","-","-","-"]
[8,10690237,"SNP","C","A","stop_gained","Vradi08g05250","uncharacterized protein LOC106769918","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,10690504,"INDEL","C","CAAGTTAA","frameshift_variant","Vradi08g05250","uncharacterized protein LOC106769918","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,10765159,"SNP","A","G","stop_lost","Vradi08g05260","uncharacterized protein LOC111242606","-","-","-","-"]
[8,11463254,"SNP","G","A","splice_acceptor_variant","Vradi08g05380","uncharacterized protein LOC111241037","-","-","-","-"]
[8,11463722,"INDEL","GATGGTAGTTCATGTCTGCTATAC","G","frameshift_variant","Vradi08g05380","uncharacterized protein LOC111241037","-","-","-","-"]
[8,11855816,"SNP","G","C","start_lost","Vradi08g05530","uncharacterized protein LOC106774762","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[8,11855908,"SNP","T","A","stop_gained","Vradi08g05530","uncharacterized protein LOC106774762","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[8,11856430,"SNP","A","G","stop_lost","Vradi08g05530","uncharacterized protein LOC106774762","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[8,12115462,"SNP","A","T","stop_gained","Vradi08g05570","-","-","-","-","-"]
[8,12188269,"INDEL","T","TC","frameshift_variant","Vradi08g05580","-","-","-","-","-"]
[8,12188636,"INDEL","T","TTG","frameshift_variant","Vradi08g05580","-","-","-","-","-"]
[8,12189120,"INDEL","C","CCA","frameshift_variant","Vradi08g05580","-","-","-","-","-"]
[8,12189125,"SNP","C","A","splice_acceptor_variant","Vradi08g05580","-","-","-","-","-"]
[8,12189415,"SNP","A","G","start_lost","Vradi08g05580","-","-","-","-","-"]
[8,12396565,"INDEL","C","CAT","frameshift_variant","Vradi08g05600","-","-","-","-","-"]
[8,12476737,"SNP","A","G","splice_acceptor_variant","Vradi08g05620","glycinol 4-dimethylallyltransferase-like","-","integral component of membrane [GO:0016021]","transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]","integral component of membrane [GO:0016021]; transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]"]
[8,12615085,"SNP","A","G","splice_donor_variant","Vradi08g05650","uncharacterized protein LOC111241503","-","-","-","-"]
[8,12827821,"INDEL","AAC","A","frameshift_variant","Vradi08g05710","-","-","-","-","-"]
[8,12888468,"INDEL","T","TG","frameshift_variant","Vradi08g05730","Dihydroorotase (EC 3.5.2.3)","'de novo' UMP biosynthetic process [GO:0044205]; pyrimidine nucleobase biosynthetic process [GO:0019856]","-","dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]","dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]; 'de novo' UMP biosynthetic process [GO:0044205]; pyrimidine nucleobase biosynthetic process [GO:0019856]"]
[8,13681777,"INDEL","T","TA","frameshift_variant","Vradi08g06050","uncharacterized protein LOC111242562","-","-","-","-"]
[8,13732210,"SNP","G","A","splice_acceptor_variant","Vradi08g06070","-","-","-","-","-"]
[8,14563580,"INDEL","C","CG","frameshift_variant","Vradi08g06330","alpha-mannosidase-like","carbohydrate metabolic process [GO:0005975]","-","carbohydrate binding [GO:0030246]; catalytic activity [GO:0003824]","carbohydrate binding [GO:0030246]; catalytic activity [GO:0003824]; carbohydrate metabolic process [GO:0005975]"]
[8,14577768,"SNP","C","T","stop_gained","Vradi08g06350","uncharacterized protein LOC106754477","-","-","-","-"]
[8,14578070,"INDEL","T","TA","frameshift_variant","Vradi08g06350","uncharacterized protein LOC106754477","-","-","-","-"]
[8,14963633,"INDEL","TG","T","frameshift_variant","Vradi08g06410","methyltransferase-like protein 5 isoform X2","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]; nucleic acid binding [GO:0003676]","methyltransferase activity [GO:0008168]; nucleic acid binding [GO:0003676]; methylation [GO:0032259]"]
[8,14963829,"INDEL","AGACCTTAGGTGT","A","splice_donor_variant","Vradi08g06410","methyltransferase-like protein 5 isoform X2","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]; nucleic acid binding [GO:0003676]","methyltransferase activity [GO:0008168]; nucleic acid binding [GO:0003676]; methylation [GO:0032259]"]
[8,15353281,"SNP","A","G","start_lost","Vradi08g06460","lysM domain receptor-like kinase 3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,15354901,"SNP","G","T","stop_gained","Vradi08g06460","lysM domain receptor-like kinase 3","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,15480835,"INDEL","TACCA","T","frameshift_variant&splice_donor_variant","Vradi08g06510","Ribosome production factor 2 homolog (Ribosome biogenesis protein RPF2 homolog)","maturation of LSU-rRNA [GO:0000470]; ribosomal large subunit assembly [GO:0000027]; RNA biosynthetic process [GO:0032774]","nucleolus [GO:0005730]","rRNA binding [GO:0019843]","nucleolus [GO:0005730]; rRNA binding [GO:0019843]; maturation of LSU-rRNA [GO:0000470]; ribosomal large subunit assembly [GO:0000027]; RNA biosynthetic process [GO:0032774]"]
[8,15975198,"INDEL","GCT","G","frameshift_variant","Vradi08g06600","protein fluG isoform X1","glutamine biosynthetic process [GO:0006542]","-","glutamate-ammonia ligase activity [GO:0004356]; hydrolase activity [GO:0016787]","glutamate-ammonia ligase activity [GO:0004356]; hydrolase activity [GO:0016787]; glutamine biosynthetic process [GO:0006542]"]
[8,15975725,"SNP","C","T","stop_gained","Vradi08g06600","protein fluG isoform X1","glutamine biosynthetic process [GO:0006542]","-","glutamate-ammonia ligase activity [GO:0004356]; hydrolase activity [GO:0016787]","glutamate-ammonia ligase activity [GO:0004356]; hydrolase activity [GO:0016787]; glutamine biosynthetic process [GO:0006542]"]
[8,15975743,"SNP","C","T","splice_acceptor_variant","Vradi08g06600","protein fluG isoform X1","glutamine biosynthetic process [GO:0006542]","-","glutamate-ammonia ligase activity [GO:0004356]; hydrolase activity [GO:0016787]","glutamate-ammonia ligase activity [GO:0004356]; hydrolase activity [GO:0016787]; glutamine biosynthetic process [GO:0006542]"]
[8,16105520,"INDEL","TTCTCTCTCTCTC","TTCTCTCTC","frameshift_variant","Vradi08g06640","thylakoid membrane protein TERC, chloroplastic isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,16222682,"INDEL","T","TG","frameshift_variant","Vradi08g06660","-","-","-","-","-"]
[8,16456756,"SNP","G","A","splice_acceptor_variant","Vradi08g06710","-","-","-","-","-"]
[8,16577145,"INDEL","TC","T","frameshift_variant","Vradi08g06750","putative F-box protein At3g17490","-","-","-","-"]
[8,17009015,"INDEL","TC","T","frameshift_variant","Vradi08g06850","Structural maintenance of chromosomes protein","meiotic cell cycle [GO:0051321]; mitotic sister chromatid cohesion [GO:0007064]","cohesin complex [GO:0008278]; nucleus [GO:0005634]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","cohesin complex [GO:0008278]; nucleus [GO:0005634]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; meiotic cell cycle [GO:0051321]; mitotic sister chromatid cohesion [GO:0007064]"]
[8,17718963,"INDEL","GA","G","frameshift_variant","Vradi08g07030","-","-","-","-","-"]
[8,18899703,"INDEL","T","TCA","frameshift_variant","Vradi08g07220","-","-","-","-","-"]
[8,19399199,"SNP","C","T","stop_gained","Vradi08g07260","-","-","-","-","-"]
[8,19412964,"INDEL","TTACAATCAATCTAA","T","frameshift_variant","Vradi08g07270","Leucine carboxyl methyltransferase 1 homolog (EC 2.1.1.233)","methylation [GO:0032259]","cytoplasm [GO:0005737]; membrane [GO:0016020]","methyltransferase activity [GO:0008168]","cytoplasm [GO:0005737]; membrane [GO:0016020]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[8,19412979,"INDEL","GGATTACGAAAATAGAATGTTGAATA","G","frameshift_variant","Vradi08g07270","Leucine carboxyl methyltransferase 1 homolog (EC 2.1.1.233)","methylation [GO:0032259]","cytoplasm [GO:0005737]; membrane [GO:0016020]","methyltransferase activity [GO:0008168]","cytoplasm [GO:0005737]; membrane [GO:0016020]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[8,19535888,"INDEL","TAG","T","frameshift_variant","Vradi08g07300","uncharacterized protein LOC106771341 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,19535891,"INDEL","G","GAA","frameshift_variant","Vradi08g07300","uncharacterized protein LOC106771341 isoform X3","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,19898292,"SNP","T","C","stop_lost","Vradi08g07390","-","-","-","-","-"]
[8,20282626,"SNP","G","T","splice_acceptor_variant","Vradi08g07570","protein NLRC3","-","-","-","-"]
[8,20686507,"SNP","C","T","stop_gained","Vradi08g07760","-","-","-","-","-"]
[8,20716735,"SNP","C","T","splice_donor_variant","Vradi08g07770","uncharacterized protein LOC111241211","-","-","-","-"]
[8,20717679,"SNP","A","G","splice_donor_variant","Vradi08g07770","uncharacterized protein LOC111241211","-","-","-","-"]
[8,20979359,"INDEL","AT","A","frameshift_variant","Vradi08g07850","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[8,20979362,"INDEL","AAGGAGAT","A","frameshift_variant","Vradi08g07850","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[8,20979373,"INDEL","AGTGGG","A","frameshift_variant","Vradi08g07850","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[8,20979379,"INDEL","AGAGTTGATGGACTTCTATGGTAC","A","frameshift_variant","Vradi08g07850","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[8,20979516,"INDEL","GGGCCCTCAAGGGACGTTTATAGGTGTCTACGATGGCCATGGTGGAAACGA","G","frameshift_variant","Vradi08g07850","Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[8,21536725,"INDEL","G","GT","frameshift_variant","Vradi08g08070","-","-","-","-","-"]
[8,21536808,"INDEL","CTCCATGGCGGTCCACACGGAGCTCTTCAACCTCGACCCCGACAACTCTCGCGACTACCTCTCCGCCGGCCAGA","C","splice_donor_variant","Vradi08g08070","-","-","-","-","-"]
[8,22059168,"SNP","G","A","stop_gained","Vradi08g08170","uncharacterized protein LOC106770374","-","-","-","-"]
[8,22986188,"INDEL","CT","C","frameshift_variant","Vradi08g08370","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Ribophorin-2)","protein N-linked glycosylation [GO:0006487]","integral component of membrane [GO:0016021]; oligosaccharyltransferase complex [GO:0008250]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; oligosaccharyltransferase complex [GO:0008250]; transferase activity [GO:0016740]; protein N-linked glycosylation [GO:0006487]"]
[8,24157592,"SNP","C","T","stop_gained","Vradi08g08610","uncharacterized protein LOC106759468","-","-","-","-"]
[8,24157628,"SNP","A","T","stop_gained","Vradi08g08610","uncharacterized protein LOC106759468","-","-","-","-"]
[8,24957635,"INDEL","CAG","C","frameshift_variant","Vradi08g08860","transcription factor UNE12","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]"]
[8,25389865,"INDEL","A","AT","frameshift_variant&start_lost","Vradi08g09060","protein LONGIFOLIA 1","regulation of monopolar cell growth [GO:0051513]","-","-","regulation of monopolar cell growth [GO:0051513]"]
[8,25945014,"INDEL","TA","T","splice_acceptor_variant","Vradi08g09280","type I inositol polyphosphate 5-phosphatase 4","phosphatidylinositol dephosphorylation [GO:0046856]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; phosphatidylinositol dephosphorylation [GO:0046856]"]
[8,25996415,"INDEL","C","CTCACCTCT","frameshift_variant","Vradi08g09320","uncharacterized protein LOC106778375","-","-","-","-"]
[8,26061269,"INDEL","A","AC","frameshift_variant","Vradi08g09360","-","-","-","-","-"]
[8,26061496,"SNP","T","G","stop_lost","Vradi08g09360","-","-","-","-","-"]
[8,26123650,"SNP","G","A","stop_gained","Vradi08g09410","COMPASS-like H3K4 histone methylase component WDR5B","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[8,26123676,"SNP","C","T","stop_gained","Vradi08g09410","COMPASS-like H3K4 histone methylase component WDR5B","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[8,26165994,"INDEL","CATTTACTTTTGGT","C","frameshift_variant&stop_lost","Vradi08g09430","Ribosome-recycling factor, chloroplastic (Ribosome-releasing factor, chloroplastic)","chloroplast organization [GO:0009658]; defense response to bacterium [GO:0042742]; embryo development ending in seed dormancy [GO:0009793]; plastid translation [GO:0032544]","chloroplast stroma [GO:0009570]; thylakoid [GO:0009579]","copper ion binding [GO:0005507]","chloroplast stroma [GO:0009570]; thylakoid [GO:0009579]; copper ion binding [GO:0005507]; chloroplast organization [GO:0009658]; defense response to bacterium [GO:0042742]; embryo development ending in seed dormancy [GO:0009793]; plastid translation [GO:0032544]"]
[8,26306489,"INDEL","GTGACTTTGAACTCTCTTGTTCATTTAGCGCCCCTTC","G","stop_lost","Vradi08g09470","probable transmembrane GTPase FZO-like, chloroplastic isoform X2","-","integral component of membrane [GO:0016021]","GTP binding [GO:0005525]","integral component of membrane [GO:0016021]; GTP binding [GO:0005525]"]
[8,26532150,"INDEL","AT","A","frameshift_variant","Vradi08g09580","uncharacterized protein LOC106771522 isoform X1","biosynthetic process [GO:0009058]","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]; biosynthetic process [GO:0009058]"]
[8,26623528,"INDEL","GAGAGA","G","frameshift_variant","Vradi08g09640","Glutathione peroxidase","response to oxidative stress [GO:0006979]","-","glutathione peroxidase activity [GO:0004602]","glutathione peroxidase activity [GO:0004602]; response to oxidative stress [GO:0006979]"]
[8,27065230,"INDEL","A","AACTTGCCTTTCTATCTTATT","frameshift_variant","Vradi08g09870","Serine/threonine-protein phosphatase (EC 3.1.3.16)","brassinosteroid mediated signaling pathway [GO:0009742]","nucleus [GO:0005634]","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","nucleus [GO:0005634]; metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]; brassinosteroid mediated signaling pathway [GO:0009742]"]
[8,27146841,"SNP","G","T","stop_gained","Vradi08g09910","RNA-binding protein BRN1 isoform X2","-","ribonucleoprotein complex [GO:1990904]","RNA binding [GO:0003723]","ribonucleoprotein complex [GO:1990904]; RNA binding [GO:0003723]"]
[8,27147070,"SNP","C","T","splice_acceptor_variant","Vradi08g09910","RNA-binding protein BRN1 isoform X2","-","ribonucleoprotein complex [GO:1990904]","RNA binding [GO:0003723]","ribonucleoprotein complex [GO:1990904]; RNA binding [GO:0003723]"]
[8,27179299,"INDEL","CT","C","frameshift_variant","Vradi08g09940","protease Do-like 2, chloroplastic isoform X2","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[8,27189510,"INDEL","ATTAATTGTTGAGAGTGGGATTTGAACCCACGCCCTTTCGGACC","A","frameshift_variant","tRNA-Leu","-","-","-","-","-"]
[8,27189557,"INDEL","ACC","A","frameshift_variant","tRNA-Leu","-","-","-","-","-"]
[8,27189561,"INDEL","TAATCTGGCGCCTTAGACCAACTCGGCCATCTCAACCTTGTATCACTGAATCTACCTATATTTATATATGATGATAAATCACAGGAATAAAAAAAA","T","frameshift_variant&stop_lost","tRNA-Leu","-","-","-","-","-"]
[8,27516362,"INDEL","AAC","A","splice_donor_variant","Vradi08g10070","-","-","-","-","-"]
[8,27721949,"INDEL","G","GTTTCA","frameshift_variant","Vradi08g10150","phytochrome A-associated F-box protein","-","-","-","-"]
[8,27721955,"INDEL","G","GCAATGCTAGAGCT","frameshift_variant","Vradi08g10150","phytochrome A-associated F-box protein","-","-","-","-"]
[8,27721964,"INDEL","*","GAGCTACTGCGATCTGCAAAGTT","frameshift_variant","Vradi08g10150","phytochrome A-associated F-box protein","-","-","-","-"]
[8,28129351,"INDEL","GACGAATAGCCT","G","frameshift_variant","Vradi08g10310","-","-","-","-","-"]
[8,28142365,"INDEL","CA","C","frameshift_variant","Vradi08g10320","uncharacterized protein LOC106770934","-","-","-","-"]
[8,28253776,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28253794,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28253848,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28253968,"INDEL","CT","C","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28253992,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254189,"INDEL","TCTCC","T","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254191,"SNP","T","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254195,"INDEL","AGTCTCCCATCGTGCTACACGAGGTTTGTCTTCAACATAAGATGACATCAGAAACCTCCTTC","A","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254242,"INDEL","TCAGA","T","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254251,"INDEL","TC","T","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254386,"SNP","G","A","splice_donor_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254443,"INDEL","AGT","A","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254457,"SNP","C","T","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254512,"INDEL","TA","T","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254578,"INDEL","GC","G","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254632,"SNP","C","T","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254685,"INDEL","CT","C","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254692,"INDEL","TC","T","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254741,"INDEL","AG","A","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254856,"SNP","C","T","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254857,"SNP","C","T","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28254964,"SNP","A","T","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255020,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255024,"SNP","C","A","splice_acceptor_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255096,"SNP","C","A","splice_donor_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255105,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255106,"SNP","C","T","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255129,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255223,"INDEL","A","AT","frameshift_variant&stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255276,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255292,"INDEL","TAC","T","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255308,"INDEL","C","CTT","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255313,"INDEL","CCT","C","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255326,"INDEL","CTT","C","frameshift_variant","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28255336,"SNP","G","A","stop_gained","Vradi08g10380","uncharacterized protein LOC106774863","-","-","-","-"]
[8,28415446,"INDEL","CCGAA","C","frameshift_variant","Vradi08g10480","uncharacterized protein LOC106770458","-","-","-","-"]
[8,28415473,"SNP","G","T","stop_gained","Vradi08g10480","uncharacterized protein LOC106770458","-","-","-","-"]
[8,28447147,"SNP","G","A","stop_gained","Vradi08g10500","Hexosyltransferase (EC 2.4.1.-)","-","-","transferase activity, transferring glycosyl groups [GO:0016757]","transferase activity, transferring glycosyl groups [GO:0016757]"]
[8,28652226,"SNP","C","T","start_lost","Vradi08g10620","Protein disulfide-isomerase (EC 5.3.4.1)","-","endoplasmic reticulum [GO:0005783]","protein disulfide isomerase activity [GO:0003756]","endoplasmic reticulum [GO:0005783]; protein disulfide isomerase activity [GO:0003756]"]
[8,28706858,"INDEL","CAA","C","frameshift_variant","Vradi08g10650","Proteasome subunit alpha type","proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]","cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]","-","cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]"]
[8,28791922,"INDEL","TACGGGTGCTTC","T","frameshift_variant&stop_lost","Vradi08g10710","universal stress protein PHOS32","-","vacuole [GO:0005773]","-","vacuole [GO:0005773]"]
[8,28931355,"INDEL","CAT","C","frameshift_variant","Vradi08g10820","uncharacterized protein LOC106771392","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,29590467,"SNP","G","T","splice_acceptor_variant","Vradi08g11090","-","-","-","-","-"]
[8,29591561,"INDEL","T","TG","frameshift_variant","Vradi08g11090","-","-","-","-","-"]
[8,29591722,"SNP","C","T","stop_gained","Vradi08g11090","-","-","-","-","-"]
[8,29744267,"INDEL","C","CA","frameshift_variant","Vradi08g11170","ETO1-like protein 2","-","-","-","-"]
[8,29795665,"INDEL","TG","T","frameshift_variant","Vradi08g11180","phosphoglucomutase, cytoplasmic-like","carbohydrate metabolic process [GO:0005975]","-","intramolecular transferase activity, phosphotransferases [GO:0016868]","intramolecular transferase activity, phosphotransferases [GO:0016868]; carbohydrate metabolic process [GO:0005975]"]
[8,30222423,"SNP","C","T","stop_gained","Vradi08g11320","receptor-like protein 12","-","-","-","-"]
[8,30580943,"INDEL","TAACAG","T","frameshift_variant","Vradi08g11350","probable mediator of RNA polymerase II transcription subunit 37c","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[8,30581806,"SNP","A","T","splice_donor_variant","Vradi08g11350","probable mediator of RNA polymerase II transcription subunit 37c","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[8,30703072,"INDEL","AC","A","frameshift_variant","Vradi08g11420","uncharacterized protein LOC106770783","actin filament depolymerization [GO:0030042]","actin cytoskeleton [GO:0015629]","actin binding [GO:0003779]","actin cytoskeleton [GO:0015629]; actin binding [GO:0003779]; actin filament depolymerization [GO:0030042]"]
[8,30703582,"INDEL","G","GT","frameshift_variant","Vradi08g11420","uncharacterized protein LOC106770783","actin filament depolymerization [GO:0030042]","actin cytoskeleton [GO:0015629]","actin binding [GO:0003779]","actin cytoskeleton [GO:0015629]; actin binding [GO:0003779]; actin filament depolymerization [GO:0030042]"]
[8,30785523,"SNP","T","C","start_lost","Vradi08g11450","-","-","-","-","-"]
[8,30846139,"INDEL","GT","G","frameshift_variant","Vradi08g11520","Beta-fructofuranosidase (EC 3.2.1.26)","carbohydrate metabolic process [GO:0005975]","-","beta-fructofuranosidase activity [GO:0004564]; glycopeptide alpha-N-acetylgalactosaminidase activity [GO:0033926]","beta-fructofuranosidase activity [GO:0004564]; glycopeptide alpha-N-acetylgalactosaminidase activity [GO:0033926]; carbohydrate metabolic process [GO:0005975]"]
[8,30846144,"INDEL","ACCCTT","A","frameshift_variant","Vradi08g11520","Beta-fructofuranosidase (EC 3.2.1.26)","carbohydrate metabolic process [GO:0005975]","-","beta-fructofuranosidase activity [GO:0004564]; glycopeptide alpha-N-acetylgalactosaminidase activity [GO:0033926]","beta-fructofuranosidase activity [GO:0004564]; glycopeptide alpha-N-acetylgalactosaminidase activity [GO:0033926]; carbohydrate metabolic process [GO:0005975]"]
[8,30857690,"INDEL","C","CATTTTGCTTTGATTGCCTGTGGATTTCTTTCAATTCGAAAGGTTGAGCAGGTAAAATGTGAAGTACCATCTAATGCATATAGTAAGAACCAGCAGAGATAGTATACT","frameshift_variant&stop_gained","Vradi08g11540","-","-","-","-","-"]
[8,30872174,"INDEL","CCTGGGCCCACACTCCGCAGTATGGGATCGGGTACTGCCAGCAGTGCCCCGACAAGGTTCAGTGGCCCACTAAACTTGGGCCGAAGCCTCCTCTCTATTTCAATG","C","frameshift_variant","Vradi08g11570","Hexosyltransferase (EC 2.4.1.-)","galactose metabolic process [GO:0006012]","cytoplasm [GO:0005737]","inositol 3-alpha-galactosyltransferase activity [GO:0047216]","cytoplasm [GO:0005737]; inositol 3-alpha-galactosyltransferase activity [GO:0047216]; galactose metabolic process [GO:0006012]"]
[8,30881720,"INDEL","CA","C","frameshift_variant","Vradi08g11590","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[8,30881744,"SNP","C","A","stop_gained","Vradi08g11590","WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[8,30893977,"INDEL","AG","A","frameshift_variant","Vradi08g11600","uncharacterized protein LOC106772614","-","cytosol [GO:0005829]","pyroglutamyl-peptidase activity [GO:0016920]","cytosol [GO:0005829]; pyroglutamyl-peptidase activity [GO:0016920]"]
[8,31159158,"INDEL","G","GT","frameshift_variant","Vradi08g11790","transcription factor PIF3 isoform X2","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]"]
[8,31247216,"SNP","C","G","start_lost","Vradi08g11850","protein NRT1/ PTR FAMILY 4.5","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[8,31328918,"SNP","C","G","stop_gained","Vradi08g11920","RNA helicase (EC 3.6.4.13)","-","-","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; zinc ion binding [GO:0008270]","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; zinc ion binding [GO:0008270]"]
[8,31403792,"INDEL","C","CCATA","frameshift_variant","Vradi08g11970","uncharacterized protein LOC106770519","-","-","-","-"]
[8,31410938,"INDEL","C","CA","frameshift_variant","Vradi08g11980","uncharacterized protein LOC106772789","-","-","-","-"]
[8,31422709,"INDEL","C","CA","frameshift_variant","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31422714,"SNP","G","A","stop_gained","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31428413,"INDEL","A","AGG","frameshift_variant","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31428427,"INDEL","AAAAAGGTACTTTTCTTACCGGTGTTAATTTAACTGGGATACTTATTTTGGTTGAGCTATTGATAAATTCTAATCATGATATGCT","A","frameshift_variant&splice_donor_variant","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31428570,"INDEL","AGAGGTAATGCCTTTTCCAAAAGGCCTCTCATCTCACCT","A","splice_donor_variant","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31428610,"INDEL","GTATGAACTTTATGTGTTATATACTGACTTCTATATCTTGCATTTATA","G","splice_acceptor_variant","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31428704,"INDEL","AAGGTACTTTTTACTTTGTTTCCTTTTTGCTCTATATATATCTCATACTGTGCTTTAATTACTGATTATAATATTTGATGTTGT","A","frameshift_variant&splice_donor_variant","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31428874,"INDEL","AAGGTTTGTGGAAGCATTCTTGTAATACATGAAATATGACATATTGCATCATGTTTGATAATGAGTTTTCTAACTTCACATCCTTTCTGC","A","frameshift_variant&splice_donor_variant","Vradi08g12000","RNA pseudouridine synthase 1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[8,31435229,"SNP","A","G","splice_acceptor_variant","Vradi08g12020","uncharacterized protein LOC106770520","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,31435230,"SNP","G","A","splice_acceptor_variant","Vradi08g12020","uncharacterized protein LOC106770520","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,31519042,"INDEL","TACAGGATC","T","splice_acceptor_variant&splice_donor_variant","Vradi08g12080","-","-","-","-","-"]
[8,31534390,"INDEL","C","CA","frameshift_variant&stop_lost","Vradi08g12090","calmodulin-binding protein 60 G-like","-","-","calmodulin binding [GO:0005516]","calmodulin binding [GO:0005516]"]
[8,31551755,"INDEL","C","CTGGTAGCCCTTGGTGACTTTTACAGAGTTGAAGTAGA","frameshift_variant&stop_gained","Vradi08g12110","exonuclease DPD1, chloroplastic/mitochondrial","-","-","exonuclease activity [GO:0004527]; nucleic acid binding [GO:0003676]","exonuclease activity [GO:0004527]; nucleic acid binding [GO:0003676]"]
[8,31551872,"INDEL","C","CAGATTTGA","frameshift_variant","Vradi08g12110","exonuclease DPD1, chloroplastic/mitochondrial","-","-","exonuclease activity [GO:0004527]; nucleic acid binding [GO:0003676]","exonuclease activity [GO:0004527]; nucleic acid binding [GO:0003676]"]
[8,31558492,"INDEL","A","AC","frameshift_variant","Vradi08g12120","syntaxin-43","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]","integral component of membrane [GO:0016021]; SNAP receptor activity [GO:0005484]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]"]
[8,31612355,"SNP","A","T","splice_acceptor_variant","Vradi08g12150","kinesin-like protein KIN-14G","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,31612376,"INDEL","A","AAT","frameshift_variant","Vradi08g12150","kinesin-like protein KIN-14G","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,31612428,"INDEL","TGTAA","T","splice_donor_variant","Vradi08g12150","kinesin-like protein KIN-14G","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,31612569,"INDEL","TG","T","frameshift_variant","Vradi08g12150","kinesin-like protein KIN-14G","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,31613084,"INDEL","C","CAGCA","frameshift_variant","Vradi08g12150","kinesin-like protein KIN-14G","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,31614385,"INDEL","CA","C","frameshift_variant","Vradi08g12150","kinesin-like protein KIN-14G","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,31736406,"INDEL","GTAAT","G","splice_donor_variant","Vradi08g12250","F-box protein PP2-B15","-","-","-","-"]
[8,31753110,"SNP","G","A","splice_acceptor_variant","Vradi08g12260","glycine-rich domain-containing protein 2","-","-","-","-"]
[8,31833526,"SNP","C","T","stop_gained","tRNA-Glu","-","-","-","-","-"]
[8,31880221,"SNP","A","T","splice_acceptor_variant","Vradi08g12400","ATP-dependent DNA helicase (EC 3.6.4.12)","DNA recombination [GO:0006310]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA helicase activity [GO:0003678]; nucleic acid binding [GO:0003676]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA helicase activity [GO:0003678]; nucleic acid binding [GO:0003676]; DNA recombination [GO:0006310]"]
[8,31888778,"INDEL","TGG","T","frameshift_variant","Vradi08g12410","-","-","-","-","-"]
[8,31892913,"INDEL","G","GA","frameshift_variant","Vradi08g12430","autophagy-related protein 18a","-","-","-","-"]
[8,31897389,"SNP","G","T","splice_donor_variant","Vradi08g12440","DEAD-box ATP-dependent RNA helicase 16","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[8,32041209,"INDEL","C","CA","frameshift_variant","Vradi08g12530","protein ALWAYS EARLY 1 isoform X1","transcription, DNA-templated [GO:0006351]","nucleus [GO:0005634]; transcription repressor complex [GO:0017053]","-","nucleus [GO:0005634]; transcription repressor complex [GO:0017053]; transcription, DNA-templated [GO:0006351]"]
[8,32089569,"INDEL","C","CAA","frameshift_variant","Vradi08g12570","Beta-mannosidase (Lysosomal beta A mannosidase)","carbohydrate metabolic process [GO:0005975]","-","mannosylglycoprotein endo-beta-mannosidase activity [GO:0033947]","mannosylglycoprotein endo-beta-mannosidase activity [GO:0033947]; carbohydrate metabolic process [GO:0005975]"]
[8,32089571,"INDEL","CCT","C","frameshift_variant","Vradi08g12570","Beta-mannosidase (Lysosomal beta A mannosidase)","carbohydrate metabolic process [GO:0005975]","-","mannosylglycoprotein endo-beta-mannosidase activity [GO:0033947]","mannosylglycoprotein endo-beta-mannosidase activity [GO:0033947]; carbohydrate metabolic process [GO:0005975]"]
[8,32092842,"INDEL","CTG","C","splice_acceptor_variant","Vradi08g12570","Beta-mannosidase (Lysosomal beta A mannosidase)","carbohydrate metabolic process [GO:0005975]","-","mannosylglycoprotein endo-beta-mannosidase activity [GO:0033947]","mannosylglycoprotein endo-beta-mannosidase activity [GO:0033947]; carbohydrate metabolic process [GO:0005975]"]
[8,32227259,"SNP","G","A","stop_gained","Vradi08g12730","-","-","-","-","-"]
[8,32227294,"INDEL","C","CAA","frameshift_variant","Vradi08g12730","-","-","-","-","-"]
[8,32229072,"INDEL","G","GACCTGTCTGTGGCTCGCAAGAATTTAATTAGAATGCGCTAAAATCATAGCGGTTCTCGTAGTTTTACGATAACAATTTTAAAAGGCATTC","splice_donor_variant","Vradi08g12730","-","-","-","-","-"]
[8,32308966,"SNP","A","C","start_lost","Vradi08g12800","GDSL esterase/lipase At1g54790 isoform X1","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[8,32422915,"INDEL","GA","G","frameshift_variant","Vradi08g12870","LOW QUALITY PROTEIN: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1","-","-","-","-"]
[8,32423076,"INDEL","TGGAAATGATCTACTAGGTTAAATAAATTATACCTGAATTGATGTAAGAA","T","frameshift_variant&splice_acceptor_variant","Vradi08g12870","LOW QUALITY PROTEIN: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1","-","-","-","-"]
[8,32582161,"INDEL","AACTCTGGCTAACTGACCCCTTTGTATAGCAATCTCAACATCCAAACCGATCCAAAGGGGTTG","A","frameshift_variant&splice_acceptor_variant","Vradi08g12970","kinesin-like protein KIN-14U isoform X1","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,32582618,"INDEL","GA","G","frameshift_variant","Vradi08g12970","kinesin-like protein KIN-14U isoform X1","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,32583339,"SNP","C","T","stop_gained","Vradi08g12970","kinesin-like protein KIN-14U isoform X1","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,32583367,"INDEL","A","AT","frameshift_variant","Vradi08g12970","kinesin-like protein KIN-14U isoform X1","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,32583370,"INDEL","AG","A","frameshift_variant","Vradi08g12970","kinesin-like protein KIN-14U isoform X1","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[8,32765712,"SNP","G","A","stop_gained","Vradi08g13090","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[8,32876838,"INDEL","C","CA","frameshift_variant","Vradi08g13210","-","-","-","-","-"]
[8,32950963,"INDEL","CTG","C","frameshift_variant","Vradi08g13300","E3 ubiquitin protein ligase DRIP2 isoform X1","-","-","-","-"]
[8,33111298,"INDEL","C","CCT","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111526,"INDEL","T","TAA","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111529,"INDEL","TGGGC","T","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111536,"INDEL","T","TC","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111538,"INDEL","C","CT","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111539,"INDEL","A","AT","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111542,"INDEL","CAA","C","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111554,"INDEL","A","AAAAATAATTAGGGTTT","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111563,"INDEL","T","TTATTTTTGTACTCAACATCTATGTGAGTCCAATCC","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33111634,"INDEL","TCC","T","frameshift_variant","Vradi08g13450","leucine-rich repeat receptor-like protein kinase PXL1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,33325100,"INDEL","C","CT","frameshift_variant","Vradi08g13610","serine/threonine-protein phosphatase PP1 isoform X3","-","-","protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[8,33335697,"SNP","G","T","stop_gained","Vradi08g13630","uncharacterized protein LOC106769641 isoform X2","-","-","-","-"]
[8,33336294,"SNP","T","C","splice_donor_variant","Vradi08g13630","uncharacterized protein LOC106769641 isoform X2","-","-","-","-"]
[8,33446251,"SNP","G","T","stop_gained","Vradi08g13750","Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.255)","gibberellic acid mediated signaling pathway [GO:0009740]; protein O-linked glycosylation [GO:0006493]","nucleus [GO:0005634]","protein O-GlcNAc transferase activity [GO:0097363]","nucleus [GO:0005634]; protein O-GlcNAc transferase activity [GO:0097363]; gibberellic acid mediated signaling pathway [GO:0009740]; protein O-linked glycosylation [GO:0006493]"]
[8,33446260,"SNP","C","T","stop_gained","Vradi08g13750","Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.255)","gibberellic acid mediated signaling pathway [GO:0009740]; protein O-linked glycosylation [GO:0006493]","nucleus [GO:0005634]","protein O-GlcNAc transferase activity [GO:0097363]","nucleus [GO:0005634]; protein O-GlcNAc transferase activity [GO:0097363]; gibberellic acid mediated signaling pathway [GO:0009740]; protein O-linked glycosylation [GO:0006493]"]
[8,33505763,"SNP","C","T","stop_gained","Vradi08g13800","putative F-box protein PP2-B12","-","-","-","-"]
[8,33525308,"INDEL","C","CTA","splice_acceptor_variant","Vradi08g13810","uncharacterized protein LOC111241464","-","-","-","-"]
[8,33529263,"INDEL","CA","C","frameshift_variant&start_lost","Vradi08g13810","uncharacterized protein LOC111241464","-","-","-","-"]
[8,33544931,"SNP","C","T","stop_gained","Vradi08g13830","Protein pelota homolog (EC 3.1.-.-)","nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; nuclear-transcribed mRNA catabolic process, non-stop decay [GO:0070481]; RNA surveillance [GO:0071025]","cytoplasm [GO:0005737]; nucleus [GO:0005634]","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]","cytoplasm [GO:0005737]; nucleus [GO:0005634]; endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]; nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; nuclear-transcribed mRNA catabolic process, non-stop decay [GO:0070481]; RNA surveillance [GO:0071025]"]
[8,33545243,"SNP","C","T","stop_gained","Vradi08g13830","Protein pelota homolog (EC 3.1.-.-)","nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; nuclear-transcribed mRNA catabolic process, non-stop decay [GO:0070481]; RNA surveillance [GO:0071025]","cytoplasm [GO:0005737]; nucleus [GO:0005634]","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]","cytoplasm [GO:0005737]; nucleus [GO:0005634]; endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]; nuclear-transcribed mRNA catabolic process, no-go decay [GO:0070966]; nuclear-transcribed mRNA catabolic process, non-stop decay [GO:0070481]; RNA surveillance [GO:0071025]"]
[8,33552761,"INDEL","AC","A","splice_donor_variant","Vradi08g13840","uncharacterized protein LOC106769980 isoform X1","-","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]"]
[8,33723965,"INDEL","TC","T","frameshift_variant","Vradi08g13970","uncharacterized protein LOC106772274","-","integral component of membrane [GO:0016021]","lipid binding [GO:0008289]","integral component of membrane [GO:0016021]; lipid binding [GO:0008289]"]
[8,33723967,"INDEL","TC","T","frameshift_variant","Vradi08g13970","uncharacterized protein LOC106772274","-","integral component of membrane [GO:0016021]","lipid binding [GO:0008289]","integral component of membrane [GO:0016021]; lipid binding [GO:0008289]"]
[8,33794155,"INDEL","TGGGTAGGGACACCTTAATTGAC","T","frameshift_variant","Vradi08g14020","probable lysophospholipase BODYGUARD 3","-","-","-","-"]
[8,33795065,"INDEL","AGCTTGCGTTTGACGAAGGACAAGAGTGACAAAGG","A","frameshift_variant","Vradi08g14020","probable lysophospholipase BODYGUARD 3","-","-","-","-"]
[8,33884854,"INDEL","GCTCAATCTTC","G","splice_donor_variant","Vradi08g14090","plant UBX domain-containing protein 10","-","-","-","-"]
[8,34130120,"SNP","C","A","stop_gained","Vradi08g14250","uncharacterized protein LOC106771506","-","-","-","-"]
[8,34139707,"SNP","C","G","splice_donor_variant","Vradi08g14260","uncharacterized protein LOC106772092 isoform X1","histone deacetylation [GO:0016575]","-","-","histone deacetylation [GO:0016575]"]
[8,34139751,"SNP","A","T","stop_gained","Vradi08g14260","uncharacterized protein LOC106772092 isoform X1","histone deacetylation [GO:0016575]","-","-","histone deacetylation [GO:0016575]"]
[8,34288026,"INDEL","AC","A","splice_donor_variant","Vradi08g14430","AT-hook motif nuclear-localized protein","-","nucleus [GO:0005634]","minor groove of adenine-thymine-rich DNA binding [GO:0003680]","nucleus [GO:0005634]; minor groove of adenine-thymine-rich DNA binding [GO:0003680]"]
[8,34351245,"INDEL","GA","G","frameshift_variant","Vradi08g14470","calmodulin-like protein 8","-","-","calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]"]
[8,34351862,"SNP","A","G","start_lost","Vradi08g14470","calmodulin-like protein 8","-","-","calcium ion binding [GO:0005509]","calcium ion binding [GO:0005509]"]
[8,34484450,"INDEL","A","AGTTCTCAGGTGAGAAATTTATGATAAAACTTGGAAAATGTTATGAATTTGTTATAGTAACTGTGTTATTTTCATTTGATTAAGTGCAC","splice_donor_variant","Vradi08g14550","putative ion channel POLLUX-like 2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,34693074,"SNP","G","A","splice_acceptor_variant","Vradi08g14700","Methyltransferase (EC 2.1.1.-)","methylation [GO:0032259]","integral component of membrane [GO:0016021]","methyltransferase activity [GO:0008168]","integral component of membrane [GO:0016021]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[8,34693112,"INDEL","GAAGATTGCGGACAGTGCTTGATGTTGGCTGCGGTGTTGCAAGTTTTGGAGGAT","G","frameshift_variant","Vradi08g14700","Methyltransferase (EC 2.1.1.-)","methylation [GO:0032259]","integral component of membrane [GO:0016021]","methyltransferase activity [GO:0008168]","integral component of membrane [GO:0016021]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[8,34761767,"SNP","G","A","splice_acceptor_variant","Vradi08g14780","COP1-interacting protein 7","-","-","-","-"]
[8,34761820,"SNP","C","T","stop_gained","Vradi08g14780","COP1-interacting protein 7","-","-","-","-"]
[8,35142499,"SNP","G","A","stop_gained","Vradi08g15070","phosphoenolpyruvate carboxylase kinase 2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[8,35142542,"INDEL","AAC","A","frameshift_variant","Vradi08g15070","phosphoenolpyruvate carboxylase kinase 2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[8,35269567,"INDEL","CA","C","frameshift_variant","Vradi08g15120","Electron transfer flavoprotein subunit beta (Beta-ETF)","-","mitochondrial matrix [GO:0005759]","electron transfer activity [GO:0009055]","mitochondrial matrix [GO:0005759]; electron transfer activity [GO:0009055]"]
[8,35269573,"INDEL","CTCCTTTAATAACCAGGATTCCTGTTTATTAAA","C","frameshift_variant","Vradi08g15120","Electron transfer flavoprotein subunit beta (Beta-ETF)","-","mitochondrial matrix [GO:0005759]","electron transfer activity [GO:0009055]","mitochondrial matrix [GO:0005759]; electron transfer activity [GO:0009055]"]
[8,35270260,"INDEL","C","CA","splice_acceptor_variant","Vradi08g15120","Electron transfer flavoprotein subunit beta (Beta-ETF)","-","mitochondrial matrix [GO:0005759]","electron transfer activity [GO:0009055]","mitochondrial matrix [GO:0005759]; electron transfer activity [GO:0009055]"]
[8,35314811,"SNP","A","T","splice_donor_variant","Vradi08g15150","uncharacterized protein LOC106771902","-","-","-","-"]
[8,35315013,"INDEL","AAATAATACTAAGTACTTTGTAATAATAAACAGAAAACATGAACCCATTTTCATGGCTCACCAAAAGAAGAAGCAACAGTGAAACACC","A","splice_donor_variant","Vradi08g15150","uncharacterized protein LOC106771902","-","-","-","-"]
[8,35315119,"SNP","T","C","start_lost","Vradi08g15150","uncharacterized protein LOC106771902","-","-","-","-"]
[8,35476636,"INDEL","AGATAGTAATTAATAGG","A","splice_acceptor_variant","Vradi08g15250","protein PIN-LIKES 3","auxin-activated signaling pathway [GO:0009734]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; auxin-activated signaling pathway [GO:0009734]; transmembrane transport [GO:0055085]"]
[8,35476655,"INDEL","CAG","C","frameshift_variant","Vradi08g15250","protein PIN-LIKES 3","auxin-activated signaling pathway [GO:0009734]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; auxin-activated signaling pathway [GO:0009734]; transmembrane transport [GO:0055085]"]
[8,35503109,"SNP","G","A","stop_gained","Vradi08g15280","uncharacterized protein LOC106769613 isoform X3","-","-","-","-"]
[8,35503621,"INDEL","GTTATATTAATGGT","G","frameshift_variant","Vradi08g15280","uncharacterized protein LOC106769613 isoform X3","-","-","-","-"]
[8,35628053,"SNP","G","A","start_lost","Vradi08g15430","ripening-related protein grip22-like","-","-","-","-"]
[8,35628398,"INDEL","GAATC","G","frameshift_variant","Vradi08g15430","ripening-related protein grip22-like","-","-","-","-"]
[8,35628497,"SNP","G","A","stop_gained","Vradi08g15430","ripening-related protein grip22-like","-","-","-","-"]
[8,35987108,"SNP","G","A","splice_donor_variant","Vradi08g15740","RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","ubiquitin-protein transferase activity [GO:0004842]","ubiquitin-protein transferase activity [GO:0004842]"]
[8,36003892,"INDEL","GTA","G","splice_donor_variant","Vradi08g15760","nuclear pore complex protein NUP1","-","-","-","-"]
[8,36014594,"INDEL","CAT","C","frameshift_variant","Vradi08g15770","transcription factor TGA4 isoform X1","transcription, DNA-templated [GO:0006351]","-","sequence-specific DNA binding [GO:0043565]","sequence-specific DNA binding [GO:0043565]; transcription, DNA-templated [GO:0006351]"]
[8,36057664,"INDEL","T","TC","frameshift_variant","Vradi08g15820","receptor-like protein kinase isoform X2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,36057714,"INDEL","TAA","T","frameshift_variant","Vradi08g15820","receptor-like protein kinase isoform X2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,36068131,"INDEL","C","CATT","start_lost","Vradi08g15840","nudix hydrolase 26, chloroplastic","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
[8,36186426,"INDEL","A","AACTCACCATTGCT","frameshift_variant&stop_gained","Vradi08g15930","-","-","-","-","-"]
[8,36186442,"SNP","G","A","stop_gained","Vradi08g15930","-","-","-","-","-"]
[8,36527193,"INDEL","GGTAATTAAGAAATGTTTTTAAGTTTAATTACATA","G","splice_donor_variant","Vradi08g16070","early endosome antigen 1","-","-","-","-"]
[8,36534236,"INDEL","TA","T","frameshift_variant","Vradi08g16070","early endosome antigen 1","-","-","-","-"]
[8,36601533,"SNP","A","T","splice_acceptor_variant","Vradi08g16110","probable U3 small nucleolar RNA-associated protein 7","-","nucleolus [GO:0005730]","-","nucleolus [GO:0005730]"]
[8,36601616,"SNP","G","T","stop_lost","Vradi08g16110","probable U3 small nucleolar RNA-associated protein 7","-","nucleolus [GO:0005730]","-","nucleolus [GO:0005730]"]
[8,36644894,"SNP","C","T","stop_gained","Vradi08g16150","uncharacterized protein LOC106771103","-","-","-","-"]
[8,36792509,"SNP","C","T","stop_gained","Vradi08g16230","Conserved oligomeric Golgi complex subunit 1","intra-Golgi vesicle-mediated transport [GO:0006891]; protein transport [GO:0015031]","Golgi transport complex [GO:0017119]; membrane [GO:0016020]","-","Golgi transport complex [GO:0017119]; membrane [GO:0016020]; intra-Golgi vesicle-mediated transport [GO:0006891]; protein transport [GO:0015031]"]
[8,36793125,"INDEL","TG","T","frameshift_variant","Vradi08g16230","Conserved oligomeric Golgi complex subunit 1","intra-Golgi vesicle-mediated transport [GO:0006891]; protein transport [GO:0015031]","Golgi transport complex [GO:0017119]; membrane [GO:0016020]","-","Golgi transport complex [GO:0017119]; membrane [GO:0016020]; intra-Golgi vesicle-mediated transport [GO:0006891]; protein transport [GO:0015031]"]
[8,36858711,"SNP","C","G","stop_gained","Vradi08g16290","host cell factor","-","-","-","-"]
[8,36936372,"INDEL","AC","A","frameshift_variant","Vradi08g16360","organelle RRM domain-containing protein 1, chloroplastic isoform X1","cytidine to uridine editing [GO:0016554]; mRNA processing [GO:0006397]","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]; cytidine to uridine editing [GO:0016554]; mRNA processing [GO:0006397]"]
[8,36940883,"SNP","G","A","stop_gained","Vradi08g16360","organelle RRM domain-containing protein 1, chloroplastic isoform X1","cytidine to uridine editing [GO:0016554]; mRNA processing [GO:0006397]","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]; cytidine to uridine editing [GO:0016554]; mRNA processing [GO:0006397]"]
[8,36973320,"SNP","G","A","stop_gained","Vradi08g16380","probable aspartyl aminopeptidase","-","-","aminopeptidase activity [GO:0004177]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]","aminopeptidase activity [GO:0004177]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]"]
[8,36973347,"INDEL","T","TAA","frameshift_variant","Vradi08g16380","probable aspartyl aminopeptidase","-","-","aminopeptidase activity [GO:0004177]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]","aminopeptidase activity [GO:0004177]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]"]
[8,36994500,"SNP","G","T","stop_gained","Vradi08g16400","-","-","-","-","-"]
[8,36995328,"INDEL","AACTTAGCTCTTTC","A","frameshift_variant","Vradi08g16400","-","-","-","-","-"]
[8,37188782,"SNP","G","A","splice_acceptor_variant","Vradi08g16510","Phosphoenolpyruvate carboxylase (EC 4.1.1.31)","carbon fixation [GO:0015977]; tricarboxylic acid cycle [GO:0006099]","cytoplasm [GO:0005737]","phosphoenolpyruvate carboxylase activity [GO:0008964]","cytoplasm [GO:0005737]; phosphoenolpyruvate carboxylase activity [GO:0008964]; carbon fixation [GO:0015977]; tricarboxylic acid cycle [GO:0006099]"]
[8,37884004,"INDEL","TG","T","frameshift_variant","Vradi08g16940","Chorismate synthase (EC 4.2.3.5)","aromatic amino acid family biosynthetic process [GO:0009073]; cellular amino acid biosynthetic process [GO:0008652]; chorismate biosynthetic process [GO:0009423]","-","chorismate synthase activity [GO:0004107]","chorismate synthase activity [GO:0004107]; aromatic amino acid family biosynthetic process [GO:0009073]; cellular amino acid biosynthetic process [GO:0008652]; chorismate biosynthetic process [GO:0009423]"]
[8,37884032,"SNP","C","T","splice_acceptor_variant","Vradi08g16940","Chorismate synthase (EC 4.2.3.5)","aromatic amino acid family biosynthetic process [GO:0009073]; cellular amino acid biosynthetic process [GO:0008652]; chorismate biosynthetic process [GO:0009423]","-","chorismate synthase activity [GO:0004107]","chorismate synthase activity [GO:0004107]; aromatic amino acid family biosynthetic process [GO:0009073]; cellular amino acid biosynthetic process [GO:0008652]; chorismate biosynthetic process [GO:0009423]"]
[8,38578499,"INDEL","TC","T","frameshift_variant","Vradi08g17450","uncharacterized protein LOC106771190 isoform X2","protein transport [GO:0015031]","-","-","protein transport [GO:0015031]"]
[8,38620327,"INDEL","C","CA","frameshift_variant","Vradi08g17470","Laccase (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase) (Diphenol oxidase) (Urishiol oxidase)","lignin catabolic process [GO:0046274]","apoplast [GO:0048046]","copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]","apoplast [GO:0048046]; copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]; lignin catabolic process [GO:0046274]"]
[8,38713294,"INDEL","TC","T","frameshift_variant","Vradi08g17590","ras-related protein Rab7 isoform X1","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]","GTP binding [GO:0005525]; GTPase activity [GO:0003924]"]
[8,38719746,"INDEL","TG","T","splice_donor_variant","Vradi08g17600","Magnesium transporter","-","integral component of membrane [GO:0016021]","metal ion transmembrane transporter activity [GO:0046873]","integral component of membrane [GO:0016021]; metal ion transmembrane transporter activity [GO:0046873]"]
[8,38825158,"SNP","G","A","splice_donor_variant","Vradi08g17700","-","-","-","-","-"]
[8,39167230,"INDEL","AG","A","frameshift_variant","Vradi08g17910","Pectate lyase (EC 4.2.2.2)","pectin catabolic process [GO:0045490]","cell wall [GO:0005618]","metal ion binding [GO:0046872]; pectate lyase activity [GO:0030570]","cell wall [GO:0005618]; metal ion binding [GO:0046872]; pectate lyase activity [GO:0030570]; pectin catabolic process [GO:0045490]"]
[8,39673433,"INDEL","C","CCAAGGTGGCGAAA","frameshift_variant","Vradi08g18020","-","-","-","-","-"]
[8,39940028,"SNP","T","A","splice_donor_variant","Vradi08g18240","serine/threonine-protein kinase STY46","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,40038112,"SNP","C","A","splice_acceptor_variant","Vradi08g18270","PH, RCC1 and FYVE domains-containing protein 1 isoform X2","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[8,40257712,"SNP","G","A","splice_acceptor_variant","Vradi08g18390","spastin isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[8,40257747,"INDEL","CGG","C","frameshift_variant&splice_donor_variant","Vradi08g18390","spastin isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[8,40258037,"SNP","G","T","splice_acceptor_variant","Vradi08g18390","spastin isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[8,40258108,"INDEL","TC","T","frameshift_variant","Vradi08g18390","spastin isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[8,40258122,"SNP","A","T","stop_gained","Vradi08g18390","spastin isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[8,40555554,"INDEL","A","AG","frameshift_variant","Vradi08g18760","Tripeptidyl-peptidase II (EC 3.4.14.10)","-","-","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]"]
[8,40555556,"SNP","C","T","stop_gained","Vradi08g18760","Tripeptidyl-peptidase II (EC 3.4.14.10)","-","-","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]"]
[8,40562940,"INDEL","GTACA","G","frameshift_variant","Vradi08g18760","Tripeptidyl-peptidase II (EC 3.4.14.10)","-","-","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]"]
[8,40563008,"INDEL","GGCAC","G","frameshift_variant","Vradi08g18760","Tripeptidyl-peptidase II (EC 3.4.14.10)","-","-","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]","aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]"]
[8,40682441,"INDEL","G","GT","frameshift_variant&stop_gained","Vradi08g18810","uncharacterized protein LOC111242393","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[8,40682763,"INDEL","GT","G","frameshift_variant","Vradi08g18810","uncharacterized protein LOC111242393","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[8,40682768,"INDEL","GTTCGTATAACT","G","frameshift_variant","Vradi08g18810","uncharacterized protein LOC111242393","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[8,40682828,"INDEL","TCCTTGGTATGTAGTGGCTTCTGCAAATTTAGTTTCTGTAGTGACTGAATTCTA","T","frameshift_variant&splice_donor_variant","Vradi08g18810","uncharacterized protein LOC111242393","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[8,40684193,"INDEL","A","ACT","frameshift_variant","Vradi08g18810","uncharacterized protein LOC111242393","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[8,40685709,"SNP","G","A","splice_acceptor_variant","Vradi08g18810","uncharacterized protein LOC111242393","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[8,40829373,"INDEL","TC","T","frameshift_variant","Vradi08g18980","uncharacterized protein LOC111241403","-","-","-","-"]
[8,41081096,"INDEL","TTGAGAATC","T","frameshift_variant","Vradi08g19160","protein HOTHEAD-like isoform X1","-","-","flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]","flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]"]
[8,41081145,"INDEL","CAA","C","frameshift_variant","Vradi08g19160","protein HOTHEAD-like isoform X1","-","-","flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]","flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]"]
[8,41081304,"INDEL","ATGGAGGGTGCCTCACTGGTAAAGTTGTTGATCATAATTATAAGGTTATTGGGGTCG","A","frameshift_variant","Vradi08g19160","protein HOTHEAD-like isoform X1","-","-","flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]","flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]"]
[8,41648789,"SNP","A","T","stop_gained","Vradi08g19630","serine/threonine-protein kinase STY46-like","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,41813650,"INDEL","G","GCC","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41813652,"INDEL","CAA","C","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814197,"INDEL","CA","C","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814202,"INDEL","T","TC","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814210,"INDEL","CGT","C","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814213,"INDEL","ATACG","A","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814269,"SNP","C","G","stop_gained","Vradi08g19710","-","-","-","-","-"]
[8,41814290,"SNP","C","A","stop_gained","Vradi08g19710","-","-","-","-","-"]
[8,41814363,"INDEL","AAGAG","A","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814372,"INDEL","G","GC","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814408,"INDEL","A","AAT","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814410,"INDEL","CCG","C","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814448,"INDEL","ACT","A","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,41814454,"INDEL","C","CCG","frameshift_variant","Vradi08g19710","-","-","-","-","-"]
[8,42136566,"SNP","G","A","stop_gained","Vradi08g20010","transcription factor bHLH139-like","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]"]
[8,42214020,"INDEL","AC","A","frameshift_variant","Vradi08g20070","QWRF motif-containing protein 2 isoform X2","-","-","-","-"]
[8,42214110,"SNP","G","A","stop_gained","Vradi08g20070","QWRF motif-containing protein 2 isoform X2","-","-","-","-"]
[8,42214124,"SNP","G","C","stop_gained","Vradi08g20070","QWRF motif-containing protein 2 isoform X2","-","-","-","-"]
[8,42214132,"INDEL","C","CA","frameshift_variant","Vradi08g20070","QWRF motif-containing protein 2 isoform X2","-","-","-","-"]
[8,42214135,"INDEL","CTT","C","frameshift_variant","Vradi08g20070","QWRF motif-containing protein 2 isoform X2","-","-","-","-"]
[8,42214139,"INDEL","AC","A","frameshift_variant","Vradi08g20070","QWRF motif-containing protein 2 isoform X2","-","-","-","-"]
[8,42214545,"SNP","C","T","start_lost","Vradi08g20070","QWRF motif-containing protein 2 isoform X2","-","-","-","-"]
[8,42289763,"SNP","G","A","stop_gained","Vradi08g20200","uncharacterized protein LOC106772660","-","-","-","-"]
[8,42289796,"INDEL","TG","T","frameshift_variant","Vradi08g20200","uncharacterized protein LOC106772660","-","-","-","-"]
[8,42290091,"SNP","C","T","splice_acceptor_variant","Vradi08g20200","uncharacterized protein LOC106772660","-","-","-","-"]
[8,42304574,"INDEL","TC","T","frameshift_variant","Vradi08g20210","uncharacterized protein LOC106769616 isoform X2","-","-","-","-"]
[8,42304764,"SNP","T","A","stop_gained","Vradi08g20210","uncharacterized protein LOC106769616 isoform X2","-","-","-","-"]
[8,42304795,"INDEL","TC","T","frameshift_variant","Vradi08g20210","uncharacterized protein LOC106769616 isoform X2","-","-","-","-"]
[8,42304818,"INDEL","TC","T","frameshift_variant","Vradi08g20210","uncharacterized protein LOC106769616 isoform X2","-","-","-","-"]
[8,42304857,"INDEL","TC","T","frameshift_variant","Vradi08g20210","uncharacterized protein LOC106769616 isoform X2","-","-","-","-"]
[8,42385723,"INDEL","TATTCAGGCTGCATGTTACTCTTCAATTTAC","T","frameshift_variant&splice_acceptor_variant","Vradi08g20310","transcription factor bHLH113 isoform X2","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]"]
[8,42465047,"INDEL","T","TAACAAAGAAGAAACTAAAATAAATCAAACTCCTCACATAGCTTGAAACCAATTTACG","stop_gained","Vradi08g20420","PRKR-interacting protein 1","-","-","double-stranded RNA binding [GO:0003725]","double-stranded RNA binding [GO:0003725]"]
[8,42468836,"INDEL","G","GTCAT","frameshift_variant","Vradi08g20430","protein unc-50 homolog","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[8,42510866,"INDEL","AAT","A","frameshift_variant","Vradi08g20450","UDP-glycosyltransferase 83A1-like","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[8,42510870,"INDEL","G","GGT","frameshift_variant","Vradi08g20450","UDP-glycosyltransferase 83A1-like","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[8,42525901,"INDEL","CA","C","frameshift_variant","Vradi08g20470","-","-","-","-","-"]
[8,42525910,"INDEL","G","GCGCCT","frameshift_variant","Vradi08g20470","-","-","-","-","-"]
[8,42525928,"SNP","G","A","stop_gained","Vradi08g20470","-","-","-","-","-"]
[8,42692842,"INDEL","CAA","C","frameshift_variant","Vradi08g20600","probable splicing factor 3A subunit 1","mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","spliceosomal complex [GO:0005681]","RNA binding [GO:0003723]","spliceosomal complex [GO:0005681]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[8,42692854,"INDEL","CAA","C","frameshift_variant","Vradi08g20600","probable splicing factor 3A subunit 1","mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","spliceosomal complex [GO:0005681]","RNA binding [GO:0003723]","spliceosomal complex [GO:0005681]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[8,42696947,"SNP","C","T","stop_gained","Vradi08g20600","probable splicing factor 3A subunit 1","mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","spliceosomal complex [GO:0005681]","RNA binding [GO:0003723]","spliceosomal complex [GO:0005681]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380]"]
[8,42879894,"SNP","G","C","splice_acceptor_variant","Vradi08g20810","ATP synthase subunit beta (EC 7.1.2.2)","-","mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [GO:0000275]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [GO:0000275]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]"]
[8,43038947,"INDEL","C","CATCCTAACCTGCAA","frameshift_variant","Vradi08g20920","putative zinc finger protein At1g68190 isoform X1","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[8,43038979,"SNP","C","A","stop_gained","Vradi08g20920","putative zinc finger protein At1g68190 isoform X1","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[8,43038980,"SNP","C","T","splice_acceptor_variant","Vradi08g20920","putative zinc finger protein At1g68190 isoform X1","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[8,43046154,"INDEL","GA","G","frameshift_variant","Vradi08g20930","uncharacterized protein LOC106769954 isoform X1","-","-","-","-"]
[8,43158007,"SNP","G","T","splice_donor_variant","Vradi08g21000","uncharacterized protein LOC106772842 isoform X2","biosynthetic process [GO:0009058]","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]; biosynthetic process [GO:0009058]"]
[8,43236891,"SNP","G","C","splice_acceptor_variant","Vradi08g21070","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[8,43237511,"INDEL","AT","A","frameshift_variant","Vradi08g21070","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2","-","integral component of membrane [GO:0016021]","kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]","integral component of membrane [GO:0016021]; kinase activity [GO:0016301]; polysaccharide binding [GO:0030247]"]
[8,43241844,"INDEL","CATG","C","start_lost","Vradi08g21080","LOW QUALITY PROTEIN: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; polysaccharide binding [GO:0030247]; protein serine/threonine kinase activity [GO:0004674]"]
[8,43247214,"INDEL","TTTTACCAGATAATAGCAA","T","frameshift_variant&start_lost","Vradi08g21090","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,43247659,"INDEL","A","AC","frameshift_variant","Vradi08g21090","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,43248395,"INDEL","TTCATCTGCAGAGCCAAAGCATAGCAGTAAAACTTTGAGGC","T","splice_acceptor_variant","Vradi08g21090","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,43257496,"SNP","T","G","splice_donor_variant","Vradi08g21100","uncharacterized protein LOC106771674","-","-","-","-"]
[8,43257497,"SNP","G","T","splice_donor_variant","Vradi08g21100","uncharacterized protein LOC106771674","-","-","-","-"]
[8,43264480,"INDEL","G","GGC","frameshift_variant","Vradi08g21100","uncharacterized protein LOC106771674","-","-","-","-"]
[8,43264482,"INDEL","C","CAGTTCTG","frameshift_variant&stop_gained","Vradi08g21100","uncharacterized protein LOC106771674","-","-","-","-"]
[8,43287586,"INDEL","T","TCC","frameshift_variant","Vradi08g21130","probable leucine-rich repeat receptor-like protein kinase At1g68400","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,43287588,"SNP","*","C","frameshift_variant","Vradi08g21130","probable leucine-rich repeat receptor-like protein kinase At1g68400","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,43287589,"INDEL","GTA","G","frameshift_variant","Vradi08g21130","probable leucine-rich repeat receptor-like protein kinase At1g68400","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,43337316,"INDEL","G","GT","frameshift_variant","Vradi08g21160","chaperone protein dnaJ 15 isoform X2","-","-","-","-"]
[8,43337336,"INDEL","GGA","G","frameshift_variant","Vradi08g21160","chaperone protein dnaJ 15 isoform X2","-","-","-","-"]
[8,43337341,"INDEL","A","AG","frameshift_variant","Vradi08g21160","chaperone protein dnaJ 15 isoform X2","-","-","-","-"]
[8,43337343,"INDEL","TCAGGCAAAAAGAA","T","frameshift_variant","Vradi08g21160","chaperone protein dnaJ 15 isoform X2","-","-","-","-"]
[8,43337360,"INDEL","G","GTGGGTGCCAGCTAC","frameshift_variant","Vradi08g21160","chaperone protein dnaJ 15 isoform X2","-","-","-","-"]
[8,43363573,"SNP","A","G","splice_donor_variant","Vradi08g21180","Cysteinyl-tRNA synthetase (EC 6.1.1.16)","cysteinyl-tRNA aminoacylation [GO:0006423]","-","ATP binding [GO:0005524]; cysteine-tRNA ligase activity [GO:0004817]; metal ion binding [GO:0046872]","ATP binding [GO:0005524]; cysteine-tRNA ligase activity [GO:0004817]; metal ion binding [GO:0046872]; cysteinyl-tRNA aminoacylation [GO:0006423]"]
[8,43379273,"SNP","C","T","stop_gained","Vradi08g21190","uncharacterized protein LOC106771294","-","-","-","-"]
[8,43379300,"INDEL","C","CA","frameshift_variant","Vradi08g21190","uncharacterized protein LOC106771294","-","-","-","-"]
[8,43379303,"INDEL","G","GT","frameshift_variant","Vradi08g21190","uncharacterized protein LOC106771294","-","-","-","-"]
[8,43379307,"INDEL","ACG","A","frameshift_variant","Vradi08g21190","uncharacterized protein LOC106771294","-","-","-","-"]
[8,43380142,"SNP","G","A","stop_gained","Vradi08g21190","uncharacterized protein LOC106771294","-","-","-","-"]
[8,43448663,"INDEL","G","GATAA","frameshift_variant&stop_gained","Vradi08g21250","putative membrane-bound O-acyltransferase C24H6.01c isoform X1","-","integral component of membrane [GO:0016021]","transferase activity, transferring acyl groups [GO:0016746]","integral component of membrane [GO:0016021]; transferase activity, transferring acyl groups [GO:0016746]"]
[8,43518015,"INDEL","TG","T","frameshift_variant","Vradi08g21300","IST1 homolog","protein transport [GO:0015031]","-","-","protein transport [GO:0015031]"]
[8,43814346,"INDEL","TAAAG","T","frameshift_variant&splice_acceptor_variant","Vradi08g21570","protein RNA-directed DNA methylation 3 isoform X1","regulation of DNA-templated transcription, elongation [GO:0032784]; regulation of transcription by RNA polymerase II [GO:0006357]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; regulation of DNA-templated transcription, elongation [GO:0032784]; regulation of transcription by RNA polymerase II [GO:0006357]"]
[8,43917443,"SNP","C","T","stop_gained","Vradi08g21650","transcription factor DIVARICATA","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[8,43926898,"SNP","G","A","stop_gained","Vradi08g21670","omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1","lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; lipid metabolic process [GO:0006629]"]
[8,43927024,"INDEL","GTT","G","frameshift_variant","Vradi08g21670","omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1","lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; lipid metabolic process [GO:0006629]"]
[8,44126615,"INDEL","GAC","G","frameshift_variant","Vradi08g21880","protein transport protein Sec24-like At4g32640","endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]","COPII vesicle coat [GO:0030127]","zinc ion binding [GO:0008270]","COPII vesicle coat [GO:0030127]; zinc ion binding [GO:0008270]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]"]
[8,44126676,"SNP","C","T","stop_gained","Vradi08g21880","protein transport protein Sec24-like At4g32640","endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]","COPII vesicle coat [GO:0030127]","zinc ion binding [GO:0008270]","COPII vesicle coat [GO:0030127]; zinc ion binding [GO:0008270]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]"]
[8,44126678,"INDEL","ACC","A","frameshift_variant","Vradi08g21880","protein transport protein Sec24-like At4g32640","endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]","COPII vesicle coat [GO:0030127]","zinc ion binding [GO:0008270]","COPII vesicle coat [GO:0030127]; zinc ion binding [GO:0008270]; endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]"]
[8,44216661,"INDEL","GAGAGGCCACTACCATGACATCAAGGACATGTATTTCTCCAGAAACCGGTATT","G","frameshift_variant&splice_donor_variant","Vradi08g21960","uncharacterized protein LOC106769906 isoform X2","-","-","-","-"]
[8,44421912,"SNP","T","A","stop_gained","Vradi08g22120","monooxygenase 2-like isoform X1","-","-","FAD binding [GO:0071949]; monooxygenase activity [GO:0004497]","FAD binding [GO:0071949]; monooxygenase activity [GO:0004497]"]
[8,44457160,"SNP","A","T","stop_gained","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457166,"INDEL","AGAACC","A","frameshift_variant","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457181,"SNP","C","T","stop_gained","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457356,"SNP","C","A","stop_gained","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457378,"INDEL","TA","T","frameshift_variant","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457392,"SNP","G","A","stop_gained","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457488,"INDEL","AT","A","frameshift_variant","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457491,"SNP","T","A","stop_gained","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457885,"INDEL","CG","C","frameshift_variant","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44457920,"INDEL","CG","C","frameshift_variant","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44458034,"SNP","G","A","stop_gained","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44458086,"SNP","C","T","stop_gained","Vradi08g22140","Mechanosensitive ion channel protein","ion transport [GO:0006811]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ion transport [GO:0006811]; transmembrane transport [GO:0055085]"]
[8,44463272,"INDEL","A","ATAAC","frameshift_variant","Vradi08g22150","serine/threonine-protein kinase STY46 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[8,44507006,"SNP","A","G","splice_acceptor_variant","Vradi08g22180","probable ribosome-binding factor A, chloroplastic","rRNA processing [GO:0006364]","-","-","rRNA processing [GO:0006364]"]
[8,44516847,"INDEL","A","AC","frameshift_variant","Vradi08g22190","WAT1-related protein At4g01440","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[8,44565595,"SNP","C","T","stop_gained","Vradi08g22260","transcription factor TCP7","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]"]
[8,44596241,"SNP","T","G","splice_donor_variant","Vradi08g22300","myosin-1","-","myosin complex [GO:0016459]","actin filament binding [GO:0051015]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]","myosin complex [GO:0016459]; actin filament binding [GO:0051015]; ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; motor activity [GO:0003774]"]
[8,44718590,"INDEL","GTAATCAGACTGTAGCATTCCGTTTTTCAAAAA","G","splice_donor_variant","Vradi08g22480","Serine/threonine-protein phosphatase (EC 3.1.3.16)","-","-","protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]","protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[8,44728595,"SNP","G","A","splice_donor_variant","Vradi08g22490","thioredoxin-like fold domain-containing protein MRL7L, chloroplastic","-","-","-","-"]
[8,44828559,"SNP","G","T","stop_gained","Vradi08g22650","ABC transporter B family member 20","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,44828685,"SNP","G","T","stop_gained","Vradi08g22650","ABC transporter B family member 20","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,44828803,"SNP","C","A","stop_gained","Vradi08g22650","ABC transporter B family member 20","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,44828880,"SNP","C","G","splice_acceptor_variant","Vradi08g22650","ABC transporter B family member 20","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,44829272,"SNP","G","A","stop_gained","Vradi08g22650","ABC transporter B family member 20","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,44829391,"SNP","A","C","stop_gained","Vradi08g22650","ABC transporter B family member 20","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,44878373,"INDEL","GC","G","splice_donor_variant","Vradi08g22660","-","-","-","-","-"]
[8,45059157,"SNP","C","T","stop_gained","Vradi08g22800","ABC transporter G family member 6-like","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,45059211,"SNP","G","T","stop_gained","Vradi08g22800","ABC transporter G family member 6-like","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,45059265,"INDEL","TTCCCGATGCTCACCGTG","T","frameshift_variant","Vradi08g22800","ABC transporter G family member 6-like","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,45059435,"INDEL","AGG","A","frameshift_variant","Vradi08g22800","ABC transporter G family member 6-like","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,45059439,"INDEL","G","GCA","frameshift_variant","Vradi08g22800","ABC transporter G family member 6-like","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]"]
[8,45111091,"INDEL","T","TTA","frameshift_variant","Vradi08g22850","Protein CLP1 homolog","mRNA 3'-end processing [GO:0031124]; negative regulation of gluconeogenesis [GO:0045721]","cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]","cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]; mRNA 3'-end processing [GO:0031124]; negative regulation of gluconeogenesis [GO:0045721]"]
[8,45111178,"SNP","G","A","stop_gained","Vradi08g22850","Protein CLP1 homolog","mRNA 3'-end processing [GO:0031124]; negative regulation of gluconeogenesis [GO:0045721]","cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]","cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]; mRNA 3'-end processing [GO:0031124]; negative regulation of gluconeogenesis [GO:0045721]"]
[8,45111222,"INDEL","CT","C","splice_acceptor_variant","Vradi08g22850","Protein CLP1 homolog","mRNA 3'-end processing [GO:0031124]; negative regulation of gluconeogenesis [GO:0045721]","cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]","cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]; mRNA 3'-end processing [GO:0031124]; negative regulation of gluconeogenesis [GO:0045721]"]
[8,45147142,"SNP","G","A","splice_donor_variant","Vradi08g22900","uncharacterized protein LOC111242336","-","-","-","-"]
[8,45235984,"SNP","G","A","stop_gained","Vradi08g23000","probable plastid-lipid-associated protein 12, chloroplastic isoform X2","-","-","-","-"]
[8,45253062,"INDEL","GGTCA","G","splice_donor_variant","Vradi08g23020","1,3-beta-glucan synthase (EC 2.4.1.34)","(1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]","1,3-beta-D-glucan synthase activity [GO:0003843]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]; 1,3-beta-D-glucan synthase activity [GO:0003843]; (1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]"]
[8,45262162,"INDEL","GTGAA","G","splice_donor_variant","Vradi08g23020","1,3-beta-glucan synthase (EC 2.4.1.34)","(1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]","1,3-beta-D-glucan synthase activity [GO:0003843]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]; 1,3-beta-D-glucan synthase activity [GO:0003843]; (1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]"]
[8,45429553,"INDEL","GAA","G","frameshift_variant","Vradi08g23180","uncharacterized protein LOC106772335","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[8,45512223,"INDEL","CA","C","frameshift_variant","Vradi08g23260","isoprene synthase, chloroplastic-like","-","-","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]","magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]"]
[8,45522159,"SNP","C","T","stop_gained","Vradi08g23280","prolyl 4-hydroxylase 1","-","-","dioxygenase activity [GO:0051213]; iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","dioxygenase activity [GO:0051213]; iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[8,45587859,"INDEL","A","AAAGGACAATGTACCCGAAAGAGAAATATG","frameshift_variant","Vradi08g23340","phosphoglucan, water dikinase, chloroplastic","-","-","ATP binding [GO:0005524]; kinase activity [GO:0016301]; starch binding [GO:2001070]","ATP binding [GO:0005524]; kinase activity [GO:0016301]; starch binding [GO:2001070]"]
[8,45649247,"INDEL","TG","T","frameshift_variant","Vradi08g23410","coiled-coil domain-containing protein SCD2","cytokinesis by cell plate formation [GO:0000911]","-","-","cytokinesis by cell plate formation [GO:0000911]"]
[8,45649568,"INDEL","ATATTGAAAGTATGCTTTCT","A","frameshift_variant","Vradi08g23410","coiled-coil domain-containing protein SCD2","cytokinesis by cell plate formation [GO:0000911]","-","-","cytokinesis by cell plate formation [GO:0000911]"]
[8,45687105,"SNP","C","T","stop_gained","Vradi08g23450","DNA repair RAD52-like protein 2, chloroplastic","double-strand break repair via homologous recombination [GO:0000724]","-","DNA binding [GO:0003677]","DNA binding [GO:0003677]; double-strand break repair via homologous recombination [GO:0000724]"]
[8,45687158,"INDEL","C","CGT","frameshift_variant","Vradi08g23450","DNA repair RAD52-like protein 2, chloroplastic","double-strand break repair via homologous recombination [GO:0000724]","-","DNA binding [GO:0003677]","DNA binding [GO:0003677]; double-strand break repair via homologous recombination [GO:0000724]"]
[9,332861,"INDEL","GA","G","frameshift_variant","Vradi09g00400","(R)-mandelonitrile lyase-like","-","-","flavin adenine dinucleotide binding [GO:0050660]; lyase activity [GO:0016829]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]","flavin adenine dinucleotide binding [GO:0050660]; lyase activity [GO:0016829]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]"]
[9,390296,"INDEL","CACCGTGAT","C","frameshift_variant","Vradi09g00470","protein FAM32A","-","-","-","-"]
[9,393679,"INDEL","AGATGTAGAATCAGCCATCATACTGACATTGTAACCCATATCTC","A","frameshift_variant","Vradi09g00480","V-type proton ATPase catalytic subunit A (V-ATPase subunit A) (EC 7.1.2.2) (V-ATPase 69 kDa subunit) (VAA3-1) (Vacuolar proton pump subunit alpha)","-","proton-transporting V-type ATPase, V1 domain [GO:0033180]","ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","proton-transporting V-type ATPase, V1 domain [GO:0033180]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]"]
[9,423671,"INDEL","AGTCTCCTCCG","A","frameshift_variant","Vradi09g00550","-","-","-","-","-"]
[9,631060,"INDEL","TCACAAGAGACATGTACAACTTATTCTAATTTGTTTGCTCTTCAGCATCTCCATTTTCACCATCTTCAGCAGCCGCTGCAGCCATCAACTCATCGAAGTTTGCAGTCTTTCC","T","stop_lost","Vradi09g00800","uncharacterized protein At2g34160","-","-","nucleic acid binding [GO:0003676]","nucleic acid binding [GO:0003676]"]
[9,834594,"INDEL","AAGAG","AAG","frameshift_variant","Vradi09g01040","N-terminal acetyltransferase A complex auxiliary subunit NAA15","-","-","transferase activity [GO:0016740]","transferase activity [GO:0016740]"]
[9,888068,"INDEL","G","GTAT","splice_donor_variant","Vradi09g01100","probable sulfate transporter 3.4","-","integral component of membrane [GO:0016021]","secondary active sulfate transmembrane transporter activity [GO:0008271]","integral component of membrane [GO:0016021]; secondary active sulfate transmembrane transporter activity [GO:0008271]"]
[9,912495,"INDEL","ACAAAAAT","A","frameshift_variant","Vradi09g01140","Transcription repressor (Ovate family protein)","negative regulation of transcription, DNA-templated [GO:0045892]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; negative regulation of transcription, DNA-templated [GO:0045892]"]
[9,927524,"INDEL","G","GA","frameshift_variant","Vradi09g01160","uncharacterized protein LOC106773062","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[9,927533,"INDEL","A","AT","frameshift_variant","Vradi09g01160","uncharacterized protein LOC106773062","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[9,969392,"INDEL","AGTCGAGAATAGTAGTGCAGTGC","A","frameshift_variant","Vradi09g01200","ATP-dependent DNA helicase DDX11","nucleobase-containing compound metabolic process [GO:0006139]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]","nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; nucleobase-containing compound metabolic process [GO:0006139]"]
[9,969417,"INDEL","CTTCTA","C","frameshift_variant","Vradi09g01200","ATP-dependent DNA helicase DDX11","nucleobase-containing compound metabolic process [GO:0006139]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]","nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; nucleobase-containing compound metabolic process [GO:0006139]"]
[9,969424,"INDEL","GTCTAGAACACGCTCTAGATCACCCGCATCCACCATATCCATTGCCTTCATCTTTTGTGCTAAAACATGAACTTTCTTGTTCATGTTTTCTGC","G","frameshift_variant","Vradi09g01200","ATP-dependent DNA helicase DDX11","nucleobase-containing compound metabolic process [GO:0006139]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]","nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; nucleobase-containing compound metabolic process [GO:0006139]"]
[9,969645,"INDEL","CCATTGCTGACCCGGACCTGTTGTTGTTACCATACAAGTTTATTCTGTTGAGATCAGTCTGCAGGAGATCATAAAACTCACTGTAAAACTGGTCGCTAGTGCGAGTTCTTG","C","frameshift_variant","Vradi09g01200","ATP-dependent DNA helicase DDX11","nucleobase-containing compound metabolic process [GO:0006139]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]","nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; nucleobase-containing compound metabolic process [GO:0006139]"]
[9,980579,"SNP","C","T","splice_donor_variant","Vradi09g01210","uncharacterized protein LOC106774246 isoform X1","-","integral component of membrane [GO:0016021]","phosphatidylinositol binding [GO:0035091]","integral component of membrane [GO:0016021]; phosphatidylinositol binding [GO:0035091]"]
[9,1001900,"INDEL","ATTCAGGTTGATTAACCATTCTCCTGCATTGTGGTATGATGTCTGTGTCACATTCGTTAAAGATCTGTGTGAAACTCATGCAAAAATAATTTATT","A","frameshift_variant&splice_donor_variant","Vradi09g01230","-","-","-","-","-"]
[9,1139346,"SNP","G","A","stop_gained","Vradi09g01410","uncharacterized protein LOC106773800 isoform X3","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]"]
[9,1418817,"SNP","G","A","stop_gained","Vradi09g01640","uncharacterized protein LOC106774310 isoform X1","DNA repair [GO:0006281]","-","ATP binding [GO:0005524]; damaged DNA binding [GO:0003684]; DNA-dependent ATPase activity [GO:0008094]; metal ion binding [GO:0046872]","ATP binding [GO:0005524]; damaged DNA binding [GO:0003684]; DNA-dependent ATPase activity [GO:0008094]; metal ion binding [GO:0046872]; DNA repair [GO:0006281]"]
[9,1997609,"SNP","C","A","stop_gained","Vradi09g02130","uncharacterized protein LOC106773078 isoform X2","-","-","-","-"]
[9,2008104,"INDEL","A","AAT","frameshift_variant","Vradi09g02150","Coatomer subunit zeta","protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]","-","COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]; protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]"]
[9,2245738,"INDEL","TC","T","frameshift_variant","Vradi09g02200","mitochondrial import inner membrane translocase subunit TIM23-2","-","-","-","-"]
[9,2246040,"SNP","G","T","stop_gained","Vradi09g02200","mitochondrial import inner membrane translocase subunit TIM23-2","-","-","-","-"]
[9,2246179,"SNP","G","A","stop_gained","Vradi09g02200","mitochondrial import inner membrane translocase subunit TIM23-2","-","-","-","-"]
[9,2246222,"INDEL","CCGGGTCTT","C","frameshift_variant","Vradi09g02200","mitochondrial import inner membrane translocase subunit TIM23-2","-","-","-","-"]
[9,2246242,"SNP","T","C","start_lost","Vradi09g02200","mitochondrial import inner membrane translocase subunit TIM23-2","-","-","-","-"]
[9,2297622,"INDEL","TG","T","frameshift_variant","Vradi09g02240","uncharacterized protein LOC106779191","-","-","-","-"]
[9,2297877,"INDEL","GGTCAA","G","frameshift_variant","Vradi09g02240","uncharacterized protein LOC106779191","-","-","-","-"]
[9,2299135,"INDEL","T","TCTCCCATCAGATACTC","frameshift_variant","Vradi09g02240","uncharacterized protein LOC106779191","-","-","-","-"]
[9,2301850,"INDEL","T","TTTTTGACATGC","frameshift_variant&stop_gained","Vradi09g02240","uncharacterized protein LOC106779191","-","-","-","-"]
[9,2304300,"INDEL","GTTCCT","G","frameshift_variant","Vradi09g02240","uncharacterized protein LOC106779191","-","-","-","-"]
[9,2455983,"INDEL","CT","C","frameshift_variant","Vradi09g02370","vacuolar protein sorting-associated protein 2 homolog 1","vacuolar transport [GO:0007034]","endosome [GO:0005768]","-","endosome [GO:0005768]; vacuolar transport [GO:0007034]"]
[9,2913319,"SNP","T","C","start_lost","Vradi09g02660","protein TIFY 10A","-","-","-","-"]
[9,2998741,"SNP","G","A","stop_gained","Vradi09g02730","uncharacterized protein LOC106774043","-","-","-","-"]
[9,3116778,"INDEL","AG","A","frameshift_variant","Vradi09g02870","-","-","-","-","-"]
[9,3116792,"INDEL","GAGGTGGTCACTGAGAAGAATCCTCAATTA","G","frameshift_variant","Vradi09g02870","-","-","-","-","-"]
[9,3119111,"INDEL","TGAGA","TGA","frameshift_variant","Vradi09g02880","GDSL esterase/lipase 5","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[9,3119179,"INDEL","ATGTTGCCAATGACGAATTCTAGAATATTT","A","frameshift_variant","Vradi09g02880","GDSL esterase/lipase 5","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[9,3131765,"INDEL","TTTGCAA","T","splice_acceptor_variant","Vradi09g02900","flavanone 3-dioxygenase 3","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[9,3133286,"SNP","C","T","splice_donor_variant","Vradi09g02910","-","-","-","-","-"]
[9,3462605,"INDEL","C","CATAATAATATGTGTGAAAGAGAGAAAGCATTA","frameshift_variant&stop_gained","Vradi09g03040","metacaspase-3","-","-","-","-"]
[9,3539921,"INDEL","GA","G","frameshift_variant","Vradi09g03070","probable protein phosphatase 2C 10 isoform X2","-","-","protein serine/threonine phosphatase activity [GO:0004722]","protein serine/threonine phosphatase activity [GO:0004722]"]
[9,3594286,"SNP","G","A","splice_donor_variant","Vradi09g03110","-","-","-","-","-"]
[9,3595274,"INDEL","G","GA","frameshift_variant","Vradi09g03110","-","-","-","-","-"]
[9,3859913,"SNP","C","G","splice_acceptor_variant","Vradi09g03220","50S ribosomal protein L32, chloroplastic","translation [GO:0006412]","chloroplast [GO:0009507]; large ribosomal subunit [GO:0015934]","structural constituent of ribosome [GO:0003735]","chloroplast [GO:0009507]; large ribosomal subunit [GO:0015934]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,4448457,"INDEL","A","ATG","frameshift_variant","Vradi09g03500","probable disease resistance protein At4g27220","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[9,4448461,"INDEL","T","TGA","frameshift_variant","Vradi09g03500","probable disease resistance protein At4g27220","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[9,4448521,"INDEL","T","TA","frameshift_variant","Vradi09g03500","probable disease resistance protein At4g27220","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[9,4448522,"INDEL","G","GT","frameshift_variant","Vradi09g03500","probable disease resistance protein At4g27220","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[9,4448523,"INDEL","ACC","A","frameshift_variant","Vradi09g03500","probable disease resistance protein At4g27220","-","-","ADP binding [GO:0043531]","ADP binding [GO:0043531]"]
[9,4717233,"SNP","A","C","splice_acceptor_variant","Vradi09g03630","Ribonuclease T(2) (EC 4.6.1.19)","-","-","lyase activity [GO:0016829]; ribonuclease T2 activity [GO:0033897]; RNA binding [GO:0003723]","lyase activity [GO:0016829]; ribonuclease T2 activity [GO:0033897]; RNA binding [GO:0003723]"]
[9,4933226,"INDEL","TAAA","TAA","frameshift_variant","Vradi09g03730","-","-","-","-","-"]
[9,5019209,"SNP","G","A","stop_gained","Vradi09g03760","-","-","-","-","-"]
[9,5173951,"SNP","G","T","stop_gained","Vradi09g03830","BAG family molecular chaperone regulator 6","-","-","chaperone binding [GO:0051087]","chaperone binding [GO:0051087]"]
[9,5174005,"INDEL","GCTTCAGAT","G","frameshift_variant","Vradi09g03830","BAG family molecular chaperone regulator 6","-","-","chaperone binding [GO:0051087]","chaperone binding [GO:0051087]"]
[9,5174016,"INDEL","TGCAGAGAAAGTGACTAATGCCAGAAG","T","frameshift_variant","Vradi09g03830","BAG family molecular chaperone regulator 6","-","-","chaperone binding [GO:0051087]","chaperone binding [GO:0051087]"]
[9,5174068,"SNP","G","T","stop_gained","Vradi09g03830","BAG family molecular chaperone regulator 6","-","-","chaperone binding [GO:0051087]","chaperone binding [GO:0051087]"]
[9,5253271,"SNP","C","A","splice_donor_variant","Vradi09g03850","protein ABIL1","-","-","-","-"]
[9,5338361,"INDEL","CT","C","frameshift_variant","Vradi09g03900","isoleucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1","tRNA aminoacylation for protein translation [GO:0006418]","-","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; tRNA aminoacylation for protein translation [GO:0006418]"]
[9,5340153,"SNP","C","T","splice_acceptor_variant","Vradi09g03900","isoleucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1","tRNA aminoacylation for protein translation [GO:0006418]","-","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; tRNA aminoacylation for protein translation [GO:0006418]"]
[9,5352782,"SNP","T","C","stop_lost","Vradi09g03910","-","-","-","-","-"]
[9,5398185,"SNP","G","C","splice_acceptor_variant","Vradi09g03980","-","-","-","-","-"]
[9,5514258,"INDEL","C","CT","frameshift_variant","Vradi09g04010","-","-","-","-","-"]
[9,5516531,"SNP","G","A","splice_acceptor_variant","Vradi09g04010","-","-","-","-","-"]
[9,5546495,"INDEL","CGT","C","frameshift_variant","Vradi09g04020","uncharacterized protein LOC106774290","-","-","-","-"]
[9,5546498,"SNP","C","A","splice_acceptor_variant","Vradi09g04020","uncharacterized protein LOC106774290","-","-","-","-"]
[9,5547538,"INDEL","TATACTGTGAGGAAG","T","frameshift_variant","Vradi09g04020","uncharacterized protein LOC106774290","-","-","-","-"]
[9,5559923,"INDEL","GGT","G","frameshift_variant","Vradi09g04030","-","-","-","-","-"]
[9,5559964,"SNP","T","G","stop_gained","Vradi09g04030","-","-","-","-","-"]
[9,5561078,"INDEL","CG","C","frameshift_variant","Vradi09g04030","-","-","-","-","-"]
[9,5621083,"INDEL","GA","G","frameshift_variant","Vradi09g04050","uncharacterized protein LOC111240754","-","-","-","-"]
[9,5621087,"INDEL","T","TC","frameshift_variant","Vradi09g04050","uncharacterized protein LOC111240754","-","-","-","-"]
[9,5621545,"INDEL","T","TAC","frameshift_variant","Vradi09g04050","uncharacterized protein LOC111240754","-","-","-","-"]
[9,5621547,"INDEL","G","GGT","frameshift_variant","Vradi09g04050","uncharacterized protein LOC111240754","-","-","-","-"]
[9,5623298,"INDEL","GGAAGTGATA","GAGACTGAAGTGATA","frameshift_variant","Vradi09g04050","uncharacterized protein LOC111240754","-","-","-","-"]
[9,5660182,"INDEL","ATAACAG","A","frameshift_variant&start_lost","Vradi09g04070","WRKY transcription factor 22","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]","nucleus [GO:0005634]; DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[9,5841629,"INDEL","AT","A","frameshift_variant","Vradi09g04170","-","-","-","-","-"]
[9,5962855,"INDEL","AAAATTTGAAAAATAGAGTAT","A","frameshift_variant","Vradi09g04280","-","-","-","-","-"]
[9,5962970,"SNP","C","T","stop_gained","Vradi09g04280","-","-","-","-","-"]
[9,6087495,"INDEL","C","CCT","frameshift_variant","Vradi09g04330","-","-","-","-","-"]
[9,6206509,"SNP","T","C","splice_donor_variant","Vradi09g04420","ubiquitin-conjugating enzyme E2-23 kDa isoform X1","-","-","ATP binding [GO:0005524]; transferase activity [GO:0016740]","ATP binding [GO:0005524]; transferase activity [GO:0016740]"]
[9,6440650,"SNP","C","T","start_lost","Vradi09g04530","elicitor-responsive protein 3","-","-","-","-"]
[9,6614498,"SNP","T","C","splice_acceptor_variant","Vradi09g04600","MATH domain and coiled-coil domain-containing protein At3g58360-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[9,6933175,"SNP","C","T","stop_gained","Vradi09g04800","LIM domain-containing protein PLIM2b isoform X1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[9,7232776,"SNP","C","T","stop_gained","Vradi09g04940","uncharacterized protein LOC111242274","-","-","-","-"]
[9,7232815,"INDEL","TC","T","frameshift_variant","Vradi09g04940","uncharacterized protein LOC111242274","-","-","-","-"]
[9,7233249,"SNP","C","T","stop_gained","Vradi09g04940","uncharacterized protein LOC111242274","-","-","-","-"]
[9,7447447,"INDEL","AG","A","frameshift_variant","Vradi09g05090","putative zinc transporter At3g08650 isoform X1","-","integral component of membrane [GO:0016021]","metal ion transmembrane transporter activity [GO:0046873]","integral component of membrane [GO:0016021]; metal ion transmembrane transporter activity [GO:0046873]"]
[9,7447449,"INDEL","TAC","T","frameshift_variant","Vradi09g05090","putative zinc transporter At3g08650 isoform X1","-","integral component of membrane [GO:0016021]","metal ion transmembrane transporter activity [GO:0046873]","integral component of membrane [GO:0016021]; metal ion transmembrane transporter activity [GO:0046873]"]
[9,7447486,"SNP","G","A","stop_gained","Vradi09g05090","putative zinc transporter At3g08650 isoform X1","-","integral component of membrane [GO:0016021]","metal ion transmembrane transporter activity [GO:0046873]","integral component of membrane [GO:0016021]; metal ion transmembrane transporter activity [GO:0046873]"]
[9,7447518,"SNP","T","C","splice_acceptor_variant","Vradi09g05090","putative zinc transporter At3g08650 isoform X1","-","integral component of membrane [GO:0016021]","metal ion transmembrane transporter activity [GO:0046873]","integral component of membrane [GO:0016021]; metal ion transmembrane transporter activity [GO:0046873]"]
[9,7659847,"INDEL","A","AGAAAAAATTGAAGCT","stop_gained","Vradi09g05290","squamosa promoter-binding-like protein 7 isoform X1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; metal ion binding [GO:0046872]","nucleus [GO:0005634]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]"]
[9,7729404,"SNP","G","T","stop_gained","Vradi09g05350","Malate dehydrogenase (EC 1.1.1.37)","carbohydrate metabolic process [GO:0005975]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]","-","L-malate dehydrogenase activity [GO:0030060]","L-malate dehydrogenase activity [GO:0030060]; carbohydrate metabolic process [GO:0005975]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]"]
[9,7729423,"INDEL","CTTTAA","C","frameshift_variant","Vradi09g05350","Malate dehydrogenase (EC 1.1.1.37)","carbohydrate metabolic process [GO:0005975]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]","-","L-malate dehydrogenase activity [GO:0030060]","L-malate dehydrogenase activity [GO:0030060]; carbohydrate metabolic process [GO:0005975]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]"]
[9,7730161,"SNP","A","G","splice_acceptor_variant","Vradi09g05350","Malate dehydrogenase (EC 1.1.1.37)","carbohydrate metabolic process [GO:0005975]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]","-","L-malate dehydrogenase activity [GO:0030060]","L-malate dehydrogenase activity [GO:0030060]; carbohydrate metabolic process [GO:0005975]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]"]
[9,7776856,"INDEL","C","CAAGT","frameshift_variant","Vradi09g05370","uncharacterized protein LOC106772932","-","-","-","-"]
[9,7918258,"SNP","C","T","stop_gained","Vradi09g05490","-","-","-","-","-"]
[9,7918281,"SNP","A","G","stop_lost","Vradi09g05490","-","-","-","-","-"]
[9,8062170,"SNP","C","T","splice_acceptor_variant","Vradi09g05590","Plasma membrane ATPase (EC 7.1.2.1)","proton export across plasma membrane [GO:0120029]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; proton-exporting ATPase activity, phosphorylative mechanism [GO:0008553]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ATP binding [GO:0005524]; proton-exporting ATPase activity, phosphorylative mechanism [GO:0008553]; proton export across plasma membrane [GO:0120029]"]
[9,8084735,"SNP","A","G","stop_lost","Vradi09g05620","ethylene-responsive transcription factor 2-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[9,8278583,"SNP","A","T","splice_donor_variant","Vradi09g05740","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8296372,"SNP","A","T","stop_gained","Vradi09g05750","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8324035,"INDEL","GTTTTC","G","frameshift_variant","Vradi09g05770","-","-","-","-","-"]
[9,8324044,"INDEL","ATC","A","frameshift_variant","Vradi09g05770","-","-","-","-","-"]
[9,8324050,"INDEL","GT","G","frameshift_variant","Vradi09g05770","-","-","-","-","-"]
[9,8324057,"INDEL","AT","A","frameshift_variant","Vradi09g05770","-","-","-","-","-"]
[9,8324063,"INDEL","AGCAG","A","frameshift_variant","Vradi09g05770","-","-","-","-","-"]
[9,8324090,"INDEL","A","AT","frameshift_variant","Vradi09g05770","-","-","-","-","-"]
[9,8324103,"INDEL","G","GAA","frameshift_variant","Vradi09g05770","-","-","-","-","-"]
[9,8324167,"SNP","A","C","stop_lost","Vradi09g05770","-","-","-","-","-"]
[9,8388418,"INDEL","T","TACCAA","frameshift_variant","Vradi09g05790","-","-","-","-","-"]
[9,8388425,"INDEL","AGC","A","frameshift_variant","Vradi09g05790","-","-","-","-","-"]
[9,8388444,"INDEL","GGC","G","frameshift_variant","Vradi09g05790","-","-","-","-","-"]
[9,8388450,"INDEL","T","TCAACC","frameshift_variant","Vradi09g05790","-","-","-","-","-"]
[9,8388464,"INDEL","C","CG","frameshift_variant","Vradi09g05790","-","-","-","-","-"]
[9,8388472,"INDEL","G","GTTAT","frameshift_variant","Vradi09g05790","-","-","-","-","-"]
[9,8388475,"INDEL","GGCTAGCTC","G","frameshift_variant","Vradi09g05790","-","-","-","-","-"]
[9,8401937,"INDEL","GAC","G","frameshift_variant","Vradi09g05800","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8401941,"INDEL","GC","G","frameshift_variant","Vradi09g05800","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8402123,"INDEL","A","ATTTG","frameshift_variant","Vradi09g05800","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8402132,"INDEL","G","GA","frameshift_variant","Vradi09g05800","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8402137,"INDEL","T","TG","frameshift_variant","Vradi09g05800","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8402160,"INDEL","T","TGG","frameshift_variant","Vradi09g05800","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8402163,"INDEL","ACC","A","frameshift_variant","Vradi09g05800","Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]; lipid catabolic process [GO:0016042]"]
[9,8412986,"SNP","G","C","start_lost","Vradi09g05810","-","-","-","-","-"]
[9,8412991,"INDEL","C","CGTACAGTGATCTGTG","stop_gained","Vradi09g05810","-","-","-","-","-"]
[9,8413413,"INDEL","A","AC","frameshift_variant","Vradi09g05810","-","-","-","-","-"]
[9,8464889,"INDEL","GTA","G","frameshift_variant","Vradi09g05830","-","-","-","-","-"]
[9,8464891,"INDEL","A","ATG","frameshift_variant","Vradi09g05830","-","-","-","-","-"]
[9,8672852,"INDEL","AAC","A","frameshift_variant","Vradi09g05990","nucleolin","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[9,8672856,"INDEL","A","AT","frameshift_variant","Vradi09g05990","nucleolin","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[9,8723251,"INDEL","G","GT","frameshift_variant","Vradi09g06010","60S ribosomal protein L37a","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,8723256,"INDEL","G","GAC","frameshift_variant","Vradi09g06010","60S ribosomal protein L37a","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,8723264,"INDEL","T","TTA","frameshift_variant","Vradi09g06010","60S ribosomal protein L37a","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,8723268,"INDEL","GCA","G","frameshift_variant","Vradi09g06010","60S ribosomal protein L37a","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,8733476,"INDEL","TCCACAAACCTAAAGAACCAAAGACAAAGCACAAAACCAAACAAACCCCAGTCAGCAACACACATCAGTCAACTC","T","frameshift_variant&splice_acceptor_variant","Vradi09g06020","uncharacterized protein LOC106779985","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[9,8769464,"INDEL","GA","G","frameshift_variant","Vradi09g06050","eukaryotic translation initiation factor 4G isoform X1","-","-","translation initiation factor activity [GO:0003743]","translation initiation factor activity [GO:0003743]"]
[9,8884471,"SNP","G","A","stop_gained","Vradi09g06130","-","-","-","-","-"]
[9,8884861,"SNP","T","C","stop_lost","Vradi09g06130","-","-","-","-","-"]
[9,8922849,"INDEL","G","GGA","frameshift_variant","Vradi09g06140","ATP synthase subunit delta', mitochondrial","-","proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]","proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]"]
[9,9590280,"INDEL","CCTCACAGGTACTATCAAATTGTGAA","C","frameshift_variant","Vradi09g06460","-","-","-","-","-"]
[9,9590308,"INDEL","C","CTCAAT","frameshift_variant","Vradi09g06460","-","-","-","-","-"]
[9,9590311,"INDEL","AACTGC","A","frameshift_variant","Vradi09g06460","-","-","-","-","-"]
[9,9590752,"SNP","C","T","start_lost","Vradi09g06460","-","-","-","-","-"]
[9,9791945,"INDEL","TACAACACTCAAGGTCTTTCGAGAGGACCTGTCTCTCCTGACTTTTCTGTTTAC","T","frameshift_variant&splice_donor_variant","Vradi09g06490","uncharacterized hydrolase YNR064C isoform X1","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[9,9792019,"SNP","A","T","stop_gained","Vradi09g06490","uncharacterized hydrolase YNR064C isoform X1","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[9,9792556,"INDEL","A","AT","frameshift_variant","Vradi09g06490","uncharacterized hydrolase YNR064C isoform X1","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[9,9829651,"INDEL","CTG","C","frameshift_variant&stop_lost","Vradi09g06530","scarecrow-like protein 15","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[9,9872054,"INDEL","CA","C","frameshift_variant","Vradi09g06550","probably inactive leucine-rich repeat receptor-like protein kinase At5g48380","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,9875431,"SNP","G","A","stop_gained","Vradi09g06550","probably inactive leucine-rich repeat receptor-like protein kinase At5g48380","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,9875444,"SNP","G","A","splice_donor_variant","Vradi09g06550","probably inactive leucine-rich repeat receptor-like protein kinase At5g48380","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,9880419,"INDEL","CA","C","frameshift_variant","Vradi09g06550","probably inactive leucine-rich repeat receptor-like protein kinase At5g48380","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,9916041,"SNP","A","G","stop_lost","Vradi09g06570","ethylene-responsive transcription factor CRF4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[9,9933270,"SNP","G","T","splice_donor_variant","Vradi09g06580","uncharacterized protein LOC106774180 isoform X1","-","-","-","-"]
[9,9969474,"SNP","T","G","splice_donor_variant","Vradi09g06590","chromo domain protein LHP1","chromatin silencing [GO:0006342]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; chromatin silencing [GO:0006342]"]
[9,9981514,"INDEL","GTTTTGACA","G","frameshift_variant","Vradi09g06600","uncharacterized protein LOC106773287","-","-","-","-"]
[9,9981528,"SNP","G","A","stop_gained","Vradi09g06600","uncharacterized protein LOC106773287","-","-","-","-"]
[9,10022899,"INDEL","A","AC","frameshift_variant","Vradi09g06630","Hydroxyisourate hydrolase (EC 3.5.2.17)","purine nucleobase metabolic process [GO:0006144]","-","hydroxyisourate hydrolase activity [GO:0033971]","hydroxyisourate hydrolase activity [GO:0033971]; purine nucleobase metabolic process [GO:0006144]"]
[9,10025888,"INDEL","C","CG","frameshift_variant","Vradi09g06640","Protein yippee-like","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[9,10045296,"INDEL","TTG","T","frameshift_variant","Vradi09g06660","3-hydroxyisobutyryl-CoA hydrolase 1 isoform X2","-","-","3-hydroxyisobutyryl-CoA hydrolase activity [GO:0003860]","3-hydroxyisobutyryl-CoA hydrolase activity [GO:0003860]"]
[9,10189249,"INDEL","GT","G","frameshift_variant","Vradi09g06710","protein FAR1-RELATED SEQUENCE 5 isoform X2","-","-","-","-"]
[9,10482361,"INDEL","T","TAAG","stop_lost","Vradi09g06810","uncharacterized protein LOC106773721","-","-","-","-"]
[9,10482467,"INDEL","T","TG","frameshift_variant","Vradi09g06810","uncharacterized protein LOC106773721","-","-","-","-"]
[9,10539045,"INDEL","TTCAA","T","frameshift_variant","Vradi09g06830","probable LRR receptor-like serine/threonine-protein kinase At3g47570","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,10539053,"INDEL","TCTTATTGAGTCAAGGTATTGGTAATTTTGA","T","frameshift_variant&splice_donor_variant","Vradi09g06830","probable LRR receptor-like serine/threonine-protein kinase At3g47570","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,10656849,"INDEL","C","CT","frameshift_variant","Vradi09g06840","probable xyloglucan glycosyltransferase 6","-","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]"]
[9,10656851,"SNP","C","A","stop_gained","Vradi09g06840","probable xyloglucan glycosyltransferase 6","-","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]"]
[9,10656888,"SNP","A","T","stop_lost","Vradi09g06840","probable xyloglucan glycosyltransferase 6","-","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]"]
[9,10665127,"INDEL","G","GCA","frameshift_variant","Vradi09g06850","40S ribosomal protein S8","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,10665141,"INDEL","ATCCTTCTGGCGCTTTTCTAGTTTTCTTTGCACATGATTACTCTTTTTGGCTTCTTCTGC","A","frameshift_variant","Vradi09g06850","40S ribosomal protein S8","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,10667055,"SNP","G","A","stop_gained","Vradi09g06850","40S ribosomal protein S8","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]"]
[9,10679716,"SNP","T","A","splice_acceptor_variant","Vradi09g06860","Peptidylprolyl isomerase (EC 5.2.1.8)","-","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]"]
[9,10731978,"INDEL","A","AG","frameshift_variant","Vradi09g06890","UV-B-induced protein At3g17800, chloroplastic isoform X2","-","-","-","-"]
[9,10749462,"SNP","A","T","splice_acceptor_variant","Vradi09g06900","serine/threonine-protein kinase MHK isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,10795806,"INDEL","GCATAAGT","G","frameshift_variant","Vradi09g06910","transcription factor bHLH62-like","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]; regulation of transcription, DNA-templated [GO:0006355]"]
[9,10795815,"INDEL","CTTTTCCAGTGACCT","C","splice_acceptor_variant","Vradi09g06910","transcription factor bHLH62-like","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]; regulation of transcription, DNA-templated [GO:0006355]"]
[9,10796668,"INDEL","TGGCAAC","T","splice_donor_variant","Vradi09g06910","transcription factor bHLH62-like","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]; regulation of transcription, DNA-templated [GO:0006355]"]
[9,10796676,"INDEL","TCAAC","T","frameshift_variant","Vradi09g06910","transcription factor bHLH62-like","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]; regulation of transcription, DNA-templated [GO:0006355]"]
[9,10796684,"INDEL","CTCCTGGTCCTGAA","C","frameshift_variant","Vradi09g06910","transcription factor bHLH62-like","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]","nucleus [GO:0005634]; protein dimerization activity [GO:0046983]; regulation of transcription, DNA-templated [GO:0006355]"]
[9,10858453,"INDEL","G","GTACTA","splice_donor_variant","Vradi09g06930","-","-","-","-","-"]
[9,10949363,"SNP","G","A","stop_gained","Vradi09g06940","TMV resistance protein N-like","signal transduction [GO:0007165]","-","-","signal transduction [GO:0007165]"]
[9,11063413,"INDEL","G","GTAGATA","splice_donor_variant","Vradi09g06970","TMV resistance protein N","defense response [GO:0006952]; signal transduction [GO:0007165]","-","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]","ADP binding [GO:0043531]; NAD(P)+ nucleosidase activity [GO:0050135]; NAD+ nucleotidase, cyclic ADP-ribose generating [GO:0061809]; defense response [GO:0006952]; signal transduction [GO:0007165]"]
[9,11333313,"SNP","A","C","splice_donor_variant","Vradi09g07000","-","-","-","-","-"]
[9,11385462,"SNP","C","G","splice_donor_variant","Vradi09g07040","Flotillin-like","nodulation [GO:0009877]","caveola [GO:0005901]","-","caveola [GO:0005901]; nodulation [GO:0009877]"]
[9,11385896,"SNP","A","T","start_lost","Vradi09g07040","Flotillin-like","nodulation [GO:0009877]","caveola [GO:0005901]","-","caveola [GO:0005901]; nodulation [GO:0009877]"]
[9,11385897,"SNP","T","C","start_lost","Vradi09g07040","Flotillin-like","nodulation [GO:0009877]","caveola [GO:0005901]","-","caveola [GO:0005901]; nodulation [GO:0009877]"]
[9,11415140,"INDEL","TATCTTTTGGCATGG","T","frameshift_variant","Vradi09g07050","uncharacterized protein LOC106755025","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[9,11498249,"SNP","G","T","stop_gained","Vradi09g07070","protein NRT1/ PTR FAMILY 5.6","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,11498537,"SNP","A","T","stop_gained","Vradi09g07070","protein NRT1/ PTR FAMILY 5.6","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,11498583,"SNP","C","A","stop_gained","Vradi09g07070","protein NRT1/ PTR FAMILY 5.6","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,11542389,"SNP","T","C","start_lost","Vradi09g07090","-","-","-","-","-"]
[9,11873469,"INDEL","G","GC","frameshift_variant","Vradi09g07200","uncharacterized protein LOC106774124","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[9,11873496,"SNP","T","C","stop_lost","Vradi09g07200","uncharacterized protein LOC106774124","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[9,11887812,"SNP","C","T","stop_gained","Vradi09g07210","-","-","-","-","-"]
[9,11887819,"SNP","G","A","stop_gained","Vradi09g07210","-","-","-","-","-"]
[9,11977952,"INDEL","T","TTCCATG","stop_lost","Vradi09g07260","-","-","-","-","-"]
[9,12061482,"SNP","T","C","splice_acceptor_variant","Vradi09g07290","transcription factor MYB1","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[9,12110395,"INDEL","C","CCCGG","frameshift_variant","Vradi09g07310","Laccase (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase) (Diphenol oxidase) (Urishiol oxidase)","lignin catabolic process [GO:0046274]","apoplast [GO:0048046]","copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]","apoplast [GO:0048046]; copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]; lignin catabolic process [GO:0046274]"]
[9,12110397,"INDEL","CA","C","frameshift_variant","Vradi09g07310","Laccase (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase) (Diphenol oxidase) (Urishiol oxidase)","lignin catabolic process [GO:0046274]","apoplast [GO:0048046]","copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]","apoplast [GO:0048046]; copper ion binding [GO:0005507]; hydroquinone:oxygen oxidoreductase activity [GO:0052716]; lignin catabolic process [GO:0046274]"]
[9,12213005,"INDEL","AAGAG","A","frameshift_variant","Vradi09g07360","probable serine/threonine-protein kinase BSK3","brassinosteroid mediated signaling pathway [GO:0009742]","plasma membrane [GO:0005886]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","plasma membrane [GO:0005886]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]; brassinosteroid mediated signaling pathway [GO:0009742]"]
[9,12445913,"INDEL","A","AT","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12445916,"INDEL","*","TAAG","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12445931,"INDEL","A","AG","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12445933,"INDEL","T","TACTGG","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12445938,"SNP","*","G","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12446302,"INDEL","G","GATTTC","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12446304,"SNP","*","T","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12446306,"INDEL","*","TCGTTTCACAAAGTTC","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12446311,"INDEL","T","TCACAAAGTTC","frameshift_variant","Vradi09g07500","protein NRT1/ PTR FAMILY 5.7-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[9,12663807,"INDEL","GT","G","splice_donor_variant","Vradi09g07570","uncharacterized protein LOC106774358","-","-","starch binding [GO:2001070]","starch binding [GO:2001070]"]
[9,12706041,"INDEL","TTCAACAACCACTCGATCCTATTTTGCATCCTATTTTAGTTCCTTTGCTTTCCATGGTTTA","T","frameshift_variant&splice_acceptor_variant","Vradi09g07610","Type 1 metallothionein","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[9,12708301,"INDEL","CTA","C","splice_acceptor_variant","Vradi09g07610","Type 1 metallothionein","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[9,12865862,"SNP","G","A","splice_donor_variant","Vradi09g07680","-","-","-","-","-"]
[9,13027905,"INDEL","C","CGTTT","frameshift_variant","Vradi09g07730","-","-","-","-","-"]
[9,13226564,"SNP","C","G","splice_donor_variant","Vradi09g07830","uracil phosphoribosyltransferase isoform X2","nucleoside metabolic process [GO:0009116]","-","transferase activity, transferring glycosyl groups [GO:0016757]","transferase activity, transferring glycosyl groups [GO:0016757]; nucleoside metabolic process [GO:0009116]"]
[9,13477852,"INDEL","AC","A","frameshift_variant","Vradi09g07940","sterol 3-beta-glucosyltransferase UGT80A2 isoform X2","carbohydrate metabolic process [GO:0005975]; lipid glycosylation [GO:0030259]","-","transferase activity, transferring hexosyl groups [GO:0016758]; UDP-glycosyltransferase activity [GO:0008194]","transferase activity, transferring hexosyl groups [GO:0016758]; UDP-glycosyltransferase activity [GO:0008194]; carbohydrate metabolic process [GO:0005975]; lipid glycosylation [GO:0030259]"]
[9,13478080,"SNP","G","A","stop_gained","Vradi09g07940","sterol 3-beta-glucosyltransferase UGT80A2 isoform X2","carbohydrate metabolic process [GO:0005975]; lipid glycosylation [GO:0030259]","-","transferase activity, transferring hexosyl groups [GO:0016758]; UDP-glycosyltransferase activity [GO:0008194]","transferase activity, transferring hexosyl groups [GO:0016758]; UDP-glycosyltransferase activity [GO:0008194]; carbohydrate metabolic process [GO:0005975]; lipid glycosylation [GO:0030259]"]
[9,13654981,"SNP","A","G","splice_acceptor_variant","Vradi09g08020","-","-","-","-","-"]
[9,13660393,"INDEL","A","AG","frameshift_variant","Vradi09g08040","-","-","-","-","-"]
[9,13660414,"INDEL","GT","G","frameshift_variant","Vradi09g08040","-","-","-","-","-"]
[9,13660677,"INDEL","ATTTGACTTCTTTAATGGAGATGTTCTTACGAAAGGGGAAGAAGGGACAAAGGAAGACACC","A","bidirectional_gene_fusion","Vradi09g08040&Vradi09g08050","-","-","-","-","-"]
[9,13660742,"INDEL","GA","G","frameshift_variant","Vradi09g08040","-","-","-","-","-"]
[9,13660746,"SNP","G","A","splice_donor_variant","Vradi09g08050","E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8","-","-","-","-"]
[9,13662815,"INDEL","ACGGCGGCCGG","A","frameshift_variant","Vradi09g08050","E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8","-","-","-","-"]
[9,13662831,"INDEL","ATTCCT","A","frameshift_variant","Vradi09g08050","E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8","-","-","-","-"]
[9,13676332,"SNP","T","C","splice_acceptor_variant","Vradi09g08060","protein XRI1","female meiotic nuclear division [GO:0007143]; male meiotic nuclear division [GO:0007140]","-","-","female meiotic nuclear division [GO:0007143]; male meiotic nuclear division [GO:0007140]"]
[9,13821571,"INDEL","AT","A","frameshift_variant","Vradi09g08160","GDSL esterase/lipase 1","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[9,14076659,"INDEL","T","TC","frameshift_variant","Vradi09g08270","cytochrome P450 CYP82D47-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[9,14076661,"INDEL","T","TGC","frameshift_variant","Vradi09g08270","cytochrome P450 CYP82D47-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[9,14265508,"SNP","G","T","stop_gained","Vradi09g08320","-","-","-","-","-"]
[9,14337283,"SNP","C","T","splice_donor_variant","Vradi09g08330","F-box/LRR-repeat protein 3","-","-","-","-"]
[9,14337289,"SNP","G","A","stop_gained","Vradi09g08330","F-box/LRR-repeat protein 3","-","-","-","-"]
[9,14530140,"SNP","C","T","stop_gained","Vradi09g08360","anthocyanidin reductase ((2S)-flavan-3-ol-forming)-like","-","-","catalytic activity [GO:0003824]","catalytic activity [GO:0003824]"]
[9,14569966,"INDEL","G","GAA","frameshift_variant","Vradi09g08380","-","-","-","-","-"]
[9,14773963,"INDEL","TG","T","frameshift_variant","Vradi09g08420","probable glutamate carboxypeptidase LAMP1","-","-","carboxypeptidase activity [GO:0004180]","carboxypeptidase activity [GO:0004180]"]
[9,14777177,"SNP","G","A","stop_gained","Vradi09g08430","-","-","-","-","-"]
[9,14777204,"SNP","G","A","stop_gained","Vradi09g08430","-","-","-","-","-"]
[9,15187368,"SNP","T","G","splice_donor_variant","Vradi09g08510","-","-","-","-","-"]
[9,15187369,"SNP","A","T","splice_donor_variant","Vradi09g08510","-","-","-","-","-"]
[9,15199110,"SNP","T","G","splice_acceptor_variant","Vradi09g08520","uncharacterized protein LOC106773416","-","-","hydrolase activity [GO:0016787]","hydrolase activity [GO:0016787]"]
[9,15516266,"INDEL","T","TC","frameshift_variant","Vradi09g08550","uncharacterized protein LOC111241999","-","-","-","-"]
[9,15519568,"INDEL","AGC","A","frameshift_variant","Vradi09g08560","7-methylxanthosine synthase 1-like","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[9,15519571,"INDEL","C","CTG","frameshift_variant","Vradi09g08560","7-methylxanthosine synthase 1-like","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]","methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[9,15660765,"INDEL","TC","T","frameshift_variant","Vradi09g08580","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; kinase activity [GO:0016301]"]
[9,15661438,"INDEL","TCTAACCAAATAGAAGGCCA","T","frameshift_variant","Vradi09g08580","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; kinase activity [GO:0016301]"]
[9,15661802,"SNP","C","A","stop_gained","Vradi09g08580","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; kinase activity [GO:0016301]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; kinase activity [GO:0016301]"]
[9,15679826,"SNP","T","A","stop_gained","Vradi09g08590","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,15784451,"INDEL","AG","A","frameshift_variant","Vradi09g08600","-","-","-","-","-"]
[9,15785944,"SNP","C","T","stop_gained","Vradi09g08600","-","-","-","-","-"]
[9,15839755,"SNP","T","A","splice_acceptor_variant","Vradi09g08620","-","-","-","-","-"]
[9,15908996,"INDEL","GC","G","frameshift_variant","Vradi09g08640","-","-","-","-","-"]
[9,16333443,"INDEL","CTCAA","C","frameshift_variant","Vradi09g08680","-","-","-","-","-"]
[9,16470303,"SNP","C","T","stop_gained","Vradi09g08700","-","-","-","-","-"]
[9,17047604,"SNP","G","A","stop_gained","Vradi09g08840","-","-","-","-","-"]
[9,17060379,"SNP","C","G","splice_acceptor_variant","Vradi09g08850","uncharacterized protein LOC106774008","-","-","-","-"]
[9,17068567,"SNP","T","A","splice_acceptor_variant","Vradi09g08860","-","-","-","-","-"]
[9,17069826,"SNP","A","C","splice_donor_variant","Vradi09g08860","-","-","-","-","-"]
[9,17254718,"INDEL","TTTGAGCATTGTTACACCATCCTCCAAACTTCTCTTCATATCCTC","T","frameshift_variant&start_lost","Vradi09g08910","-","-","-","-","-"]
[9,17480231,"SNP","A","G","splice_acceptor_variant","Vradi09g08960","uncharacterized protein LOC111241867","-","-","aspartic-type endopeptidase activity [GO:0004190]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","aspartic-type endopeptidase activity [GO:0004190]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[9,17480314,"SNP","*","C","frameshift_variant","Vradi09g08960","uncharacterized protein LOC111241867","-","-","aspartic-type endopeptidase activity [GO:0004190]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","aspartic-type endopeptidase activity [GO:0004190]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[9,17480316,"SNP","*","T","frameshift_variant","Vradi09g08960","uncharacterized protein LOC111241867","-","-","aspartic-type endopeptidase activity [GO:0004190]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","aspartic-type endopeptidase activity [GO:0004190]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[9,17560958,"INDEL","A","AAGTGTATGTTTTT","frameshift_variant&stop_gained","Vradi09g08970","probable leucine-rich repeat receptor-like protein kinase At1g35710","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[9,17672855,"SNP","A","T","stop_gained","Vradi09g09000","-","-","-","-","-"]
[9,17703493,"INDEL","T","TG","frameshift_variant","Vradi09g09020","-","-","-","-","-"]
[9,17985127,"INDEL","CCG","C","frameshift_variant","Vradi09g09100","-","-","-","-","-"]
[9,17986558,"SNP","T","C","splice_acceptor_variant","Vradi09g09100","-","-","-","-","-"]
[9,18039102,"SNP","G","A","stop_gained","Vradi09g09130","uncharacterized protein LOC111242277","-","-","-","-"]
[9,18039138,"SNP","G","A","stop_gained","Vradi09g09130","uncharacterized protein LOC111242277","-","-","-","-"]
[9,18039139,"SNP","C","T","stop_gained","Vradi09g09130","uncharacterized protein LOC111242277","-","-","-","-"]
[9,18039581,"SNP","G","A","splice_acceptor_variant","Vradi09g09130","uncharacterized protein LOC111242277","-","-","-","-"]
[9,18040840,"SNP","C","T","splice_donor_variant","Vradi09g09130","uncharacterized protein LOC111242277","-","-","-","-"]
[9,18343956,"INDEL","TAGAAAAAG","T","frameshift_variant&stop_lost","Vradi09g09210","-","-","-","-","-"]
[9,18343991,"INDEL","G","GA","frameshift_variant","Vradi09g09210","-","-","-","-","-"]
[9,18363007,"SNP","G","A","stop_gained","Vradi09g09230","asparagine--tRNA ligase, cytoplasmic 1-like isoform X1","tRNA aminoacylation for protein translation [GO:0006418]","-","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; tRNA aminoacylation for protein translation [GO:0006418]"]
[9,18363196,"SNP","C","A","splice_donor_variant","Vradi09g09230","asparagine--tRNA ligase, cytoplasmic 1-like isoform X1","tRNA aminoacylation for protein translation [GO:0006418]","-","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]","aminoacyl-tRNA ligase activity [GO:0004812]; ATP binding [GO:0005524]; tRNA aminoacylation for protein translation [GO:0006418]"]
[9,18402833,"SNP","T","A","stop_gained","Vradi09g09260","-","-","-","-","-"]
[9,18403568,"INDEL","GCAGA","G","frameshift_variant","Vradi09g09260","-","-","-","-","-"]
[9,18629992,"SNP","G","A","splice_donor_variant","Vradi09g09300","uncharacterized protein LOC106779714","-","-","cysteine-type peptidase activity [GO:0008234]","cysteine-type peptidase activity [GO:0008234]"]
[9,18681868,"SNP","A","C","stop_lost","Vradi09g09310","cysteine-rich repeat secretory protein 15","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[9,18768121,"INDEL","C","CG","frameshift_variant","Vradi09g09320","uncharacterized protein LOC106773483","-","-","-","-"]
[9,18768519,"INDEL","AGCATGACCTAACCATGTCACTTGCTAAGGGAATCATTGGAAGGATATCACAATTGCATATCTCAACCATGAACCCATCCGGGTCATGAAAAAGCAATTGATCCACTTTGATCCCACCTTCCTCCACCGTT","A","frameshift_variant&splice_donor_variant","Vradi09g09320","uncharacterized protein LOC106773483","-","-","-","-"]
[9,18768856,"SNP","G","A","stop_gained","Vradi09g09320","uncharacterized protein LOC106773483","-","-","-","-"]
[9,18768861,"SNP","G","T","stop_gained","Vradi09g09320","uncharacterized protein LOC106773483","-","-","-","-"]
[9,18769369,"SNP","C","T","stop_gained","Vradi09g09320","uncharacterized protein LOC106773483","-","-","-","-"]
[9,19091698,"INDEL","AT","A","frameshift_variant","Vradi09g09390","transcription factor bHLH140 isoform X1","DNA repair [GO:0006281]","nucleus [GO:0005634]","DNA 5'-adenosine monophosphate hydrolase activity [GO:0033699]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]","nucleus [GO:0005634]; DNA 5'-adenosine monophosphate hydrolase activity [GO:0033699]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]; DNA repair [GO:0006281]"]
[9,19095814,"INDEL","TAACC","T","frameshift_variant","Vradi09g09400","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; recognition of pollen [GO:0048544]"]
[9,19096595,"SNP","C","T","splice_donor_variant","Vradi09g09400","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; recognition of pollen [GO:0048544]"]
[9,19362887,"INDEL","CTT","C","frameshift_variant","Vradi09g09470","lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X2","intracellular cholesterol transport [GO:0032367]; intracellular signal transduction [GO:0035556]; lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]; trans-Golgi network [GO:0005802]","phosphatidylinositol phospholipase C activity [GO:0004435]","integral component of membrane [GO:0016021]; trans-Golgi network [GO:0005802]; phosphatidylinositol phospholipase C activity [GO:0004435]; intracellular cholesterol transport [GO:0032367]; intracellular signal transduction [GO:0035556]; lipid metabolic process [GO:0006629]"]
[9,19397067,"INDEL","AT","A","frameshift_variant","Vradi09g09480","protein trichome birefringence-like 3","-","-","-","-"]
[9,19397070,"INDEL","GAACTGTTA","G","frameshift_variant","Vradi09g09480","protein trichome birefringence-like 3","-","-","-","-"]
[9,19402846,"INDEL","AGATGTCTCCTGATGATTTCATAAGAAATAATCGTGGCATT","A","splice_acceptor_variant","Vradi09g09490","brefeldin A-inhibited guanine nucleotide-exchange protein 3-like","regulation of ARF protein signal transduction [GO:0032012]","cytosol [GO:0005829]; membrane [GO:0016020]","guanyl-nucleotide exchange factor activity [GO:0005085]","cytosol [GO:0005829]; membrane [GO:0016020]; guanyl-nucleotide exchange factor activity [GO:0005085]; regulation of ARF protein signal transduction [GO:0032012]"]
[9,19461606,"INDEL","GT","G","frameshift_variant","Vradi09g09520","uncharacterized protein LOC111242544 isoform X1","-","-","-","-"]
[9,19908623,"INDEL","G","GC","frameshift_variant","Vradi09g09610","eukaryotic translation initiation factor 2 subunit alpha homolog","-","-","translation initiation factor activity [GO:0003743]","translation initiation factor activity [GO:0003743]"]
[9,19957959,"SNP","T","A","splice_donor_variant","Vradi09g09630","symplekin","-","-","-","-"]
[9,20077134,"INDEL","AG","A","frameshift_variant","Vradi09g09670","beta-conglycinin, beta chain-like","-","-","-","-"]
[9,20077544,"INDEL","CAA","C","frameshift_variant","Vradi09g09670","beta-conglycinin, beta chain-like","-","-","-","-"]
[9,20077763,"INDEL","TG","T","frameshift_variant","Vradi09g09670","beta-conglycinin, beta chain-like","-","-","-","-"]
[9,20200853,"INDEL","T","TC","frameshift_variant","Vradi09g09740","-","-","-","-","-"]
[9,20233101,"INDEL","GGTGTCTGAGATAAAGAGTT","G","frameshift_variant&stop_lost","Vradi09g09750","Vacuolar cation/proton exchanger","-","integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774]","calcium:proton antiporter activity [GO:0015369]","integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774]; calcium:proton antiporter activity [GO:0015369]"]
[9,20247032,"SNP","G","A","splice_acceptor_variant","Vradi09g09760","-","-","-","-","-"]
[9,20454523,"SNP","C","T","stop_gained","Vradi09g09800","Glutaminase (EC 3.5.1.2)","pyridoxal phosphate biosynthetic process [GO:0042823]","-","glutaminase activity [GO:0004359]","glutaminase activity [GO:0004359]; pyridoxal phosphate biosynthetic process [GO:0042823]"]
[10,46095,"SNP","G","C","splice_donor_variant","Vradi10g00030","-","-","-","-","-"]
[10,98951,"INDEL","A","AC","frameshift_variant","Vradi10g00060","-","-","-","-","-"]
[10,190739,"INDEL","CGG","C","frameshift_variant","Vradi10g00090","non-specific lipid-transfer protein A-like","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[10,190748,"INDEL","CT","C","frameshift_variant","Vradi10g00090","non-specific lipid-transfer protein A-like","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[10,190751,"INDEL","GA","G","frameshift_variant","Vradi10g00090","non-specific lipid-transfer protein A-like","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[10,190771,"INDEL","CA","C","frameshift_variant","Vradi10g00090","non-specific lipid-transfer protein A-like","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[10,190778,"INDEL","GC","G","frameshift_variant","Vradi10g00090","non-specific lipid-transfer protein A-like","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[10,190796,"SNP","C","A","stop_gained","Vradi10g00090","non-specific lipid-transfer protein A-like","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]","lipid binding [GO:0008289]; lipid transport [GO:0006869]"]
[10,587950,"SNP","A","G","splice_donor_variant","Vradi10g00140","spermidine hydroxycinnamoyl transferase-like","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[10,588011,"INDEL","GCCGCGATTCCTCA","G","frameshift_variant","Vradi10g00140","spermidine hydroxycinnamoyl transferase-like","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[10,588053,"INDEL","TA","T","frameshift_variant","Vradi10g00140","spermidine hydroxycinnamoyl transferase-like","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[10,1759146,"INDEL","G","GTTGCGTTGTT","frameshift_variant","Vradi10g00410","uncharacterized protein LOC106774664 isoform X2","-","-","-","-"]
[10,1759161,"INDEL","ACT","A","frameshift_variant","Vradi10g00410","uncharacterized protein LOC106774664 isoform X2","-","-","-","-"]
[10,1759165,"INDEL","C","CT","frameshift_variant","Vradi10g00410","uncharacterized protein LOC106774664 isoform X2","-","-","-","-"]
[10,1759289,"INDEL","ATC","A","frameshift_variant","Vradi10g00410","uncharacterized protein LOC106774664 isoform X2","-","-","-","-"]
[10,1759290,"INDEL","G","GCACA","frameshift_variant","Vradi10g00410","uncharacterized protein LOC106774664 isoform X2","-","-","-","-"]
[10,1759298,"INDEL","TTG","T","frameshift_variant","Vradi10g00410","uncharacterized protein LOC106774664 isoform X2","-","-","-","-"]
[10,1836289,"INDEL","TTACTTGCTTATTC","T","frameshift_variant","Vradi10g00420","uncharacterized protein LOC106775535","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,1836306,"INDEL","ACTGCCAC","A","frameshift_variant","Vradi10g00420","uncharacterized protein LOC106775535","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,1836391,"SNP","C","A","stop_gained","Vradi10g00420","uncharacterized protein LOC106775535","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,2136377,"INDEL","ATAGATC","A","frameshift_variant&stop_lost","Vradi10g00580","uncharacterized protein LOC106774675 isoform X1 (uncharacterized protein LOC106774675 isoform X2)","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,2227625,"SNP","G","A","splice_acceptor_variant","Vradi10g00590","uncharacterized protein LOC111240764","-","-","-","-"]
[10,2228514,"SNP","C","T","stop_gained","Vradi10g00590","uncharacterized protein LOC111240764","-","-","-","-"]
[10,2234168,"SNP","G","A","stop_gained","Vradi10g00600","-","-","-","-","-"]
[10,2240733,"INDEL","T","TCAATCATTTG","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241075,"INDEL","TGA","T","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241078,"INDEL","A","ATG","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241128,"INDEL","TCA","T","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241143,"INDEL","A","ACT","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241212,"INDEL","A","AAG","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241214,"INDEL","ATT","A","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241307,"INDEL","AAT","A","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241313,"INDEL","C","CTT","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241446,"INDEL","ACCAC","A","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241588,"INDEL","GTC","G","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241593,"INDEL","A","AAT","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241638,"INDEL","C","CTTCTT","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241662,"INDEL","C","CTA","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241663,"INDEL","AGG","A","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241775,"SNP","G","T","stop_gained","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241896,"INDEL","G","GCC","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241897,"INDEL","TGA","T","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241924,"INDEL","CG","C","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2241928,"INDEL","T","TC","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242186,"INDEL","A","ATGTCT","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242189,"INDEL","A","AG","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242196,"INDEL","GAA","G","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242205,"INDEL","G","GGT","frameshift_variant&stop_gained","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242400,"INDEL","A","AGC","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242561,"INDEL","G","GAA","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242563,"INDEL","CTT","C","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242576,"INDEL","CA","C","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242581,"INDEL","AGATG","A","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2242587,"INDEL","A","AAC","frameshift_variant","Vradi10g00610","putative receptor-like protein kinase At3g47110","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[10,2670279,"INDEL","A","AGCTT","frameshift_variant","Vradi10g00760","ATPase family AAA domain-containing protein 1-B isoform X3","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[10,2670359,"SNP","A","T","stop_gained","Vradi10g00760","ATPase family AAA domain-containing protein 1-B isoform X3","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[10,2773099,"INDEL","TTTCGTCGGACC","T","frameshift_variant","Vradi10g00830","MAG2-interacting protein 2 isoform X2","protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","endoplasmic reticulum [GO:0005783]","-","endoplasmic reticulum [GO:0005783]; protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]"]
[10,2773181,"SNP","G","A","stop_gained","Vradi10g00830","MAG2-interacting protein 2 isoform X2","protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","endoplasmic reticulum [GO:0005783]","-","endoplasmic reticulum [GO:0005783]; protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]"]
[10,2816780,"INDEL","AT","A","frameshift_variant","Vradi10g00840","-","-","-","-","-"]
[10,3553250,"SNP","C","T","stop_gained","Vradi10g01170","LOW QUALITY PROTEIN: uncharacterized protein LOC106775917","-","-","serine-type peptidase activity [GO:0008236]","serine-type peptidase activity [GO:0008236]"]
[10,3554101,"SNP","C","T","stop_gained","Vradi10g01170","LOW QUALITY PROTEIN: uncharacterized protein LOC106775917","-","-","serine-type peptidase activity [GO:0008236]","serine-type peptidase activity [GO:0008236]"]
[10,3914413,"SNP","C","T","stop_gained","Vradi10g01300","Phosphomevalonate kinase (EC 2.7.4.2)","isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]","-","ATP binding [GO:0005524]; phosphomevalonate kinase activity [GO:0004631]","ATP binding [GO:0005524]; phosphomevalonate kinase activity [GO:0004631]; isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]"]
[10,3916035,"INDEL","GTAC","G","splice_donor_variant","Vradi10g01300","Phosphomevalonate kinase (EC 2.7.4.2)","isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]","-","ATP binding [GO:0005524]; phosphomevalonate kinase activity [GO:0004631]","ATP binding [GO:0005524]; phosphomevalonate kinase activity [GO:0004631]; isopentenyl diphosphate biosynthetic process, mevalonate pathway [GO:0019287]"]
[10,4238701,"SNP","T","C","stop_lost","Vradi10g01460","cation/calcium exchanger 2-like","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; transmembrane transport [GO:0055085]"]
[10,4238766,"SNP","G","A","stop_gained","Vradi10g01460","cation/calcium exchanger 2-like","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; transmembrane transport [GO:0055085]"]
[10,4238769,"INDEL","CCT","C","frameshift_variant","Vradi10g01460","cation/calcium exchanger 2-like","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]; transmembrane transport [GO:0055085]"]
[10,4341718,"SNP","A","T","splice_acceptor_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345338,"INDEL","CCCGACTG","C","frameshift_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345340,"SNP","C","T","stop_gained","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345347,"INDEL","C","CAATTACA","frameshift_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345355,"INDEL","GAA","G","frameshift_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345361,"INDEL","TAC","T","frameshift_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345365,"INDEL","A","ATG","frameshift_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345480,"INDEL","G","GT","frameshift_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4345528,"INDEL","G","GA","frameshift_variant","Vradi10g01490","uncharacterized protein LOC106774449","-","-","-","-"]
[10,4373728,"INDEL","CTACACCACA","C","splice_acceptor_variant","Vradi10g01500","probable plastidic glucose transporter 1 isoform X2","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]; carbohydrate transport [GO:0008643]"]
[10,4425706,"SNP","C","A","stop_gained","Vradi10g01520","uncharacterized protein LOC106775723 isoform X1","-","-","-","-"]
[10,4427273,"SNP","C","T","stop_gained","Vradi10g01520","uncharacterized protein LOC106775723 isoform X1","-","-","-","-"]
[10,4535955,"INDEL","G","GTATA","splice_donor_variant","Vradi10g01550","disease resistance protein RML1B-like","-","-","-","-"]
[10,4564818,"INDEL","AT","A","frameshift_variant","Vradi10g01570","-","-","-","-","-"]
[10,4633053,"SNP","G","T","splice_donor_variant","Vradi10g01610","Superoxide dismutase (EC 1.15.1.1)","-","-","metal ion binding [GO:0046872]; superoxide dismutase activity [GO:0004784]","metal ion binding [GO:0046872]; superoxide dismutase activity [GO:0004784]"]
[10,4650839,"INDEL","AGGTT","A","frameshift_variant&splice_donor_variant","Vradi10g01620","Non-structural maintenance of chromosomes element 1 homolog","double-strand break repair [GO:0006302]","nucleus [GO:0005634]; Smc5-Smc6 complex [GO:0030915]","-","nucleus [GO:0005634]; Smc5-Smc6 complex [GO:0030915]; double-strand break repair [GO:0006302]"]
[10,4943819,"INDEL","T","TG","frameshift_variant","Vradi10g01670","uncharacterized protein LOC111241583","-","-","-","-"]
[10,4986607,"SNP","G","A","splice_acceptor_variant","Vradi10g01680","Lipoxygenase (EC 1.13.11.-)","fatty acid biosynthetic process [GO:0006633]; oxylipin biosynthetic process [GO:0031408]","cytoplasm [GO:0005737]","metal ion binding [GO:0046872]; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [GO:0016702]","cytoplasm [GO:0005737]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [GO:0016702]; fatty acid biosynthetic process [GO:0006633]; oxylipin biosynthetic process [GO:0031408]"]
[10,5050808,"SNP","G","A","stop_gained","Vradi10g01720","Glycosyltransferase (EC 2.4.1.-)","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[10,5057935,"SNP","C","T","stop_gained","Vradi10g01720","Glycosyltransferase (EC 2.4.1.-)","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[10,5061134,"INDEL","AATTC","A","frameshift_variant","Vradi10g01720","Glycosyltransferase (EC 2.4.1.-)","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[10,5061140,"INDEL","CG","C","frameshift_variant","Vradi10g01720","Glycosyltransferase (EC 2.4.1.-)","-","-","UDP-glycosyltransferase activity [GO:0008194]","UDP-glycosyltransferase activity [GO:0008194]"]
[10,5414887,"SNP","G","A","stop_gained","Vradi10g01850","-","-","-","-","-"]
[10,5414919,"INDEL","TC","T","frameshift_variant","Vradi10g01850","-","-","-","-","-"]
[10,5415112,"SNP","G","T","stop_gained","Vradi10g01850","-","-","-","-","-"]
[10,5657497,"SNP","T","A","stop_gained","Vradi10g01930","-","-","-","-","-"]
[10,6062457,"SNP","G","A","splice_acceptor_variant","Vradi10g02060","uncharacterized protein LOC106774428","-","-","-","-"]
[10,6062663,"INDEL","TC","T","frameshift_variant","Vradi10g02060","uncharacterized protein LOC106774428","-","-","-","-"]
[10,6180123,"INDEL","GTATA","G","splice_donor_variant","Vradi10g02080","ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X2","protein refolding [GO:0042026]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]; protein refolding [GO:0042026]"]
[10,6862096,"SNP","G","A","splice_acceptor_variant","Vradi10g02400","Glycerophosphodiester phosphodiesterase (EC 3.1.4.46)","glycerol metabolic process [GO:0006071]; lipid metabolic process [GO:0006629]","-","glycerophosphodiester phosphodiesterase activity [GO:0008889]","glycerophosphodiester phosphodiesterase activity [GO:0008889]; glycerol metabolic process [GO:0006071]; lipid metabolic process [GO:0006629]"]
[10,7354159,"INDEL","C","CA","frameshift_variant","Vradi10g02640","cytochrome P450 71D9-like","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","integral component of membrane [GO:0016021]; heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[10,7651442,"INDEL","T","TA","frameshift_variant","Vradi10g02780","probable 28S rRNA (Cytosine(4447)-C(5))-methyltransferase","ribosome biogenesis [GO:0042254]; RNA methylation [GO:0001510]; RNA processing [GO:0006396]","nucleolus [GO:0005730]","RNA binding [GO:0003723]; S-adenosylmethionine-dependent methyltransferase activity [GO:0008757]","nucleolus [GO:0005730]; RNA binding [GO:0003723]; S-adenosylmethionine-dependent methyltransferase activity [GO:0008757]; ribosome biogenesis [GO:0042254]; RNA methylation [GO:0001510]; RNA processing [GO:0006396]"]
[10,8000400,"INDEL","T","TC","frameshift_variant","Vradi10g03000","Vacuolar cation/proton exchanger","-","integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774]","calcium:proton antiporter activity [GO:0015369]","integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774]; calcium:proton antiporter activity [GO:0015369]"]
[10,8403510,"SNP","G","A","splice_acceptor_variant","Vradi10g03180","uncharacterized protein LOC111242699","-","-","-","-"]
[10,8793889,"INDEL","GATGGATCTAGGC","GTGGATCTAGGC","frameshift_variant","Vradi10g03270","uncharacterized protein LOC106774772","cell cycle [GO:0007049]; cellular response to DNA damage stimulus [GO:0006974]; DNA replication checkpoint [GO:0000076]; replication fork protection [GO:0048478]","nucleus [GO:0005634]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]","nucleus [GO:0005634]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]; cell cycle [GO:0007049]; cellular response to DNA damage stimulus [GO:0006974]; DNA replication checkpoint [GO:0000076]; replication fork protection [GO:0048478]"]
[10,8898798,"SNP","G","A","stop_gained","Vradi10g03330","villin-1","actin filament capping [GO:0051693]; actin filament severing [GO:0051014]; cytoskeleton organization [GO:0007010]","-","actin filament binding [GO:0051015]","actin filament binding [GO:0051015]; actin filament capping [GO:0051693]; actin filament severing [GO:0051014]; cytoskeleton organization [GO:0007010]"]
[10,9225667,"INDEL","TG","T","frameshift_variant","Vradi10g03520","UPF0503 protein At3g09070, chloroplastic-like","-","-","-","-"]
[10,9225711,"SNP","C","T","stop_gained","Vradi10g03520","UPF0503 protein At3g09070, chloroplastic-like","-","-","-","-"]
[10,10092059,"INDEL","T","TC","frameshift_variant","Vradi10g03930","DEAD-box ATP-dependent RNA helicase 20","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[10,10123047,"INDEL","AAAAGG","A","frameshift_variant","Vradi10g03970","uncharacterized protein LOC106774795","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,10164110,"INDEL","ATGAAGTTGCGTGGGTTGTGT","A","frameshift_variant&start_lost","Vradi10g04000","root phototropism protein 2","phototropism [GO:0009638]; protein ubiquitination [GO:0016567]","-","-","phototropism [GO:0009638]; protein ubiquitination [GO:0016567]"]
[10,10554048,"SNP","G","A","splice_acceptor_variant","Vradi10g04130","bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT","-","-","catalytic activity [GO:0003824]; nucleotide binding [GO:0000166]","catalytic activity [GO:0003824]; nucleotide binding [GO:0000166]"]
[10,10632989,"INDEL","CAAGT","C","frameshift_variant&splice_donor_variant","Vradi10g04190","protein TIC 40, chloroplastic","-","-","-","-"]
[10,10731751,"INDEL","C","CTA","splice_acceptor_variant","Vradi10g04320","uncharacterized protein LOC106775357 isoform X3","-","-","-","-"]
[10,10869390,"SNP","G","T","splice_donor_variant","Vradi10g04410","ras-related protein RHN1 isoform X2","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]","GTP binding [GO:0005525]; GTPase activity [GO:0003924]"]
[10,11664769,"INDEL","AT","A","frameshift_variant","Vradi10g05000","E3 ubiquitin-protein ligase ATL6-like","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,11703409,"INDEL","A","AT","frameshift_variant","Vradi10g05020","branched-chain-amino-acid aminotransferase-like protein 2","-","-","transaminase activity [GO:0008483]","transaminase activity [GO:0008483]"]
[10,11894281,"INDEL","TG","T","frameshift_variant","Vradi10g05130","histidine-containing phosphotransfer protein 1 isoform X1","cytokinin-activated signaling pathway [GO:0009736]; phosphorelay signal transduction system [GO:0000160]","cytosol [GO:0005829]","-","cytosol [GO:0005829]; cytokinin-activated signaling pathway [GO:0009736]; phosphorelay signal transduction system [GO:0000160]"]
[10,12353678,"SNP","G","T","splice_donor_variant","Vradi10g05530","serine/threonine-protein kinase Nek2 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[10,12928639,"INDEL","AGAGTACGGTCATTGAAT","A","frameshift_variant","Vradi10g05840","endoribonuclease Dicer homolog 2","gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]; gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]"]
[10,12928699,"INDEL","T","TTA","frameshift_variant","Vradi10g05840","endoribonuclease Dicer homolog 2","gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]; gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]"]
[10,12928713,"INDEL","G","GTC","frameshift_variant","Vradi10g05840","endoribonuclease Dicer homolog 2","gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]; gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]"]
[10,12931715,"INDEL","ACCG","A","frameshift_variant&splice_donor_variant","Vradi10g05840","endoribonuclease Dicer homolog 2","gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]; gene silencing by RNA [GO:0031047]; RNA processing [GO:0006396]"]
[10,13096174,"INDEL","TG","T","frameshift_variant","Vradi10g05960","-","-","-","-","-"]
[10,13096275,"SNP","C","A","stop_gained","Vradi10g05960","-","-","-","-","-"]
[10,13096311,"SNP","C","A","stop_gained","Vradi10g05960","-","-","-","-","-"]
[10,13096488,"SNP","G","A","stop_gained","Vradi10g05960","-","-","-","-","-"]
[10,13610784,"INDEL","ATTTTTACTGTGATCTATACAGGAAGAC","A","splice_acceptor_variant","Vradi10g06330","Polynucleotide adenylyltransferase (EC 2.7.7.19)","mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]; nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]; mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]"]
[10,13610844,"INDEL","A","AT","frameshift_variant&stop_gained","Vradi10g06330","Polynucleotide adenylyltransferase (EC 2.7.7.19)","mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]; nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]; mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]"]
[10,13610845,"INDEL","A","AT","frameshift_variant","Vradi10g06330","Polynucleotide adenylyltransferase (EC 2.7.7.19)","mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]; nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]; mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]"]
[10,13610850,"INDEL","TG","T","frameshift_variant","Vradi10g06330","Polynucleotide adenylyltransferase (EC 2.7.7.19)","mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]","integral component of membrane [GO:0016021]; nucleus [GO:0005634]; nucleotide binding [GO:0000166]; polynucleotide adenylyltransferase activity [GO:0004652]; mRNA processing [GO:0006397]; RNA polyadenylation [GO:0043631]"]
[10,14270666,"SNP","G","T","stop_gained","Vradi10g06960","aspartyl protease family protein At5g10770","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[10,14298963,"SNP","G","C","splice_acceptor_variant","Vradi10g07000","uncharacterized protein LOC106775106 isoform X1","-","-","-","-"]
[10,14299073,"INDEL","AT","A","frameshift_variant","Vradi10g07000","uncharacterized protein LOC106775106 isoform X1","-","-","-","-"]
[10,14299076,"INDEL","AC","A","frameshift_variant","Vradi10g07000","uncharacterized protein LOC106775106 isoform X1","-","-","-","-"]
[10,14486805,"INDEL","C","CT","frameshift_variant","Vradi10g07180","uncharacterized protein LOC106775626","-","-","-","-"]
[10,14621507,"INDEL","A","ATTGTT","frameshift_variant","Vradi10g07250","uncharacterized protein LOC106774878","-","-","-","-"]
[10,14621508,"INDEL","C","CT","frameshift_variant","Vradi10g07250","uncharacterized protein LOC106774878","-","-","-","-"]
[10,14648418,"INDEL","TAA","T","frameshift_variant","Vradi10g07260","14 kDa proline-rich protein DC2.15-like","-","-","-","-"]
[10,14648422,"INDEL","C","CGT","frameshift_variant","Vradi10g07260","14 kDa proline-rich protein DC2.15-like","-","-","-","-"]
[10,14648602,"INDEL","A","ACT","frameshift_variant","Vradi10g07260","14 kDa proline-rich protein DC2.15-like","-","-","-","-"]
[10,14648605,"INDEL","GCA","G","frameshift_variant","Vradi10g07260","14 kDa proline-rich protein DC2.15-like","-","-","-","-"]
[10,14653311,"INDEL","TAAA","TAA","frameshift_variant","Vradi10g07270","trihelix transcription factor GT-2 isoform X1","-","-","-","-"]
[10,14676875,"INDEL","CT","C","frameshift_variant","Vradi10g07310","SNF1-related protein kinase regulatory subunit beta-2","-","-","-","-"]
[10,14690735,"SNP","A","G","splice_donor_variant","Vradi10g07320","-","-","-","-","-"]
[10,14878379,"INDEL","G","GA","frameshift_variant","Vradi10g07550","tonoplast dicarboxylate transporter","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[10,15006641,"INDEL","TAACTCTAGGTCTTGGGGAGGAAA","T","stop_lost","Vradi10g07650","-","-","-","-","-"]
[10,15059504,"INDEL","AT","A","frameshift_variant","Vradi10g07700","-","-","-","-","-"]
[10,15063330,"INDEL","ATTTAAAATT","A","frameshift_variant&splice_donor_variant","Vradi10g07710","RPM1-interacting protein 4","-","-","-","-"]
[10,15107455,"SNP","T","C","splice_donor_variant","Vradi10g07760","plastid-lipid-associated protein, chloroplastic","-","-","-","-"]
[10,15174679,"INDEL","T","TTG","frameshift_variant","Vradi10g07800","uncharacterized protein LOC106776551","-","-","-","-"]
[10,15174750,"INDEL","GT","G","frameshift_variant","Vradi10g07800","uncharacterized protein LOC106776551","-","-","-","-"]
[10,15222173,"SNP","G","A","splice_acceptor_variant","Vradi10g07820","39S ribosomal protein L46, mitochondrial","-","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]","ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]"]
[10,15285044,"SNP","A","G","stop_lost","Vradi10g07900","Pyridoxal phosphate homeostasis protein (PLP homeostasis protein)","-","-","pyridoxal phosphate binding [GO:0030170]","pyridoxal phosphate binding [GO:0030170]"]
[10,15287213,"INDEL","C","CTGTGA","splice_acceptor_variant","Vradi10g07900","Pyridoxal phosphate homeostasis protein (PLP homeostasis protein)","-","-","pyridoxal phosphate binding [GO:0030170]","pyridoxal phosphate binding [GO:0030170]"]
[10,15336830,"INDEL","AT","A","frameshift_variant","Vradi10g07970","aspartic proteinase A1 isoform X1","lipid metabolic process [GO:0006629]","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]; lipid metabolic process [GO:0006629]"]
[10,15367376,"INDEL","G","GAAGGA","frameshift_variant","Vradi10g08020","probable F-box protein At4g22030","-","-","-","-"]
[10,15367384,"INDEL","C","CTG","frameshift_variant","Vradi10g08020","probable F-box protein At4g22030","-","-","-","-"]
[10,15367388,"INDEL","AG","A","frameshift_variant","Vradi10g08020","probable F-box protein At4g22030","-","-","-","-"]
[10,15367399,"SNP","C","G","splice_donor_variant","Vradi10g08020","probable F-box protein At4g22030","-","-","-","-"]
[10,15497016,"INDEL","CG","C","frameshift_variant","Vradi10g08130","uncharacterized protein LOC106775956","-","proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]","proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]","proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]"]
[10,15733057,"SNP","A","T","stop_gained","Vradi10g08310","chromatin accessibility complex protein 1 isoform X2","-","nucleus [GO:0005634]","protein heterodimerization activity [GO:0046982]","nucleus [GO:0005634]; protein heterodimerization activity [GO:0046982]"]
[10,15851624,"INDEL","C","CTT","frameshift_variant","Vradi10g08380","probable E3 ubiquitin-protein ligase LUL4","-","-","-","-"]
[10,16190915,"INDEL","GA","G","frameshift_variant","Vradi10g08600","serpin-ZX","-","extracellular space [GO:0005615]","-","extracellular space [GO:0005615]"]
[10,16190917,"INDEL","CCG","C","frameshift_variant","Vradi10g08600","serpin-ZX","-","extracellular space [GO:0005615]","-","extracellular space [GO:0005615]"]
[10,16190937,"INDEL","T","TAG","frameshift_variant","Vradi10g08600","serpin-ZX","-","extracellular space [GO:0005615]","-","extracellular space [GO:0005615]"]
[10,16190938,"INDEL","T","TTG","frameshift_variant","Vradi10g08600","serpin-ZX","-","extracellular space [GO:0005615]","-","extracellular space [GO:0005615]"]
[10,16190939,"INDEL","C","CAG","frameshift_variant","Vradi10g08600","serpin-ZX","-","extracellular space [GO:0005615]","-","extracellular space [GO:0005615]"]
[10,16237764,"INDEL","AG","A","frameshift_variant","Vradi10g08660","S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)","S-adenosylmethioninamine biosynthetic process [GO:0006557]; spermidine biosynthetic process [GO:0008295]; spermine biosynthetic process [GO:0006597]","-","adenosylmethionine decarboxylase activity [GO:0004014]","adenosylmethionine decarboxylase activity [GO:0004014]; S-adenosylmethioninamine biosynthetic process [GO:0006557]; spermidine biosynthetic process [GO:0008295]; spermine biosynthetic process [GO:0006597]"]
[10,16460345,"SNP","C","A","stop_gained","Vradi10g08880","uncharacterized protein LOC106774521","-","SAGA complex [GO:0000124]","-","SAGA complex [GO:0000124]"]
[10,16586493,"INDEL","CTACAAAGGATGCAAAA","C","splice_acceptor_variant","Vradi10g09020","anaphase-promoting complex subunit 7","-","-","-","-"]
[10,16608379,"INDEL","A","ACCAACATTTTCCAGAAGGCTCTCACTCCTTTGAATTCTCAACCTCTCTTGCCACCTTC","frameshift_variant","Vradi10g09040","ethylene-responsive transcription factor LEP-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[10,16608814,"INDEL","AGGATG","A","frameshift_variant","Vradi10g09040","ethylene-responsive transcription factor LEP-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[10,16609046,"INDEL","TCTTGGTAA","T","frameshift_variant","Vradi10g09040","ethylene-responsive transcription factor LEP-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[10,16609113,"INDEL","T","TC","frameshift_variant","Vradi10g09040","ethylene-responsive transcription factor LEP-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[10,16609119,"INDEL","A","ATCTTT","frameshift_variant","Vradi10g09040","ethylene-responsive transcription factor LEP-like","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[10,16732160,"INDEL","TTTCTTCCTTCTATTCCCCTTACCCATCATC","T","frameshift_variant&splice_donor_variant","Vradi10g09180","protein kinase PINOID","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[10,16803429,"INDEL","C","CACAT","frameshift_variant","Vradi10g09220","uncharacterized protein LOC106775338","-","NatC complex [GO:0031417]","-","NatC complex [GO:0031417]"]
[10,17162187,"SNP","T","G","splice_acceptor_variant","Vradi10g09630","subtilisin-like protease SBT5.6","-","-","serine-type endopeptidase activity [GO:0004252]","serine-type endopeptidase activity [GO:0004252]"]
[10,17237127,"INDEL","C","CT","frameshift_variant","Vradi10g09670","GDSL esterase/lipase At1g29670","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[10,17237148,"INDEL","A","AC","frameshift_variant","Vradi10g09670","GDSL esterase/lipase At1g29670","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[10,17237149,"INDEL","A","ATTGTG","frameshift_variant","Vradi10g09670","GDSL esterase/lipase At1g29670","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[10,17237899,"SNP","G","T","stop_gained","Vradi10g09670","GDSL esterase/lipase At1g29670","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[10,17238053,"SNP","T","G","splice_donor_variant","Vradi10g09670","GDSL esterase/lipase At1g29670","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[10,17238334,"SNP","C","T","stop_gained","Vradi10g09670","GDSL esterase/lipase At1g29670","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[10,17238374,"SNP","A","G","stop_lost","Vradi10g09670","GDSL esterase/lipase At1g29670","-","-","hydrolase activity, acting on ester bonds [GO:0016788]","hydrolase activity, acting on ester bonds [GO:0016788]"]
[10,17715534,"INDEL","A","AC","frameshift_variant","Vradi10g10090","P34 probable thiol protease","-","-","cysteine-type peptidase activity [GO:0008234]","cysteine-type peptidase activity [GO:0008234]"]
[10,17715710,"INDEL","C","CA","frameshift_variant","Vradi10g10090","P34 probable thiol protease","-","-","cysteine-type peptidase activity [GO:0008234]","cysteine-type peptidase activity [GO:0008234]"]
[10,17715776,"SNP","G","A","stop_gained","Vradi10g10090","P34 probable thiol protease","-","-","cysteine-type peptidase activity [GO:0008234]","cysteine-type peptidase activity [GO:0008234]"]
[10,17875663,"SNP","C","A","stop_gained","Vradi10g10210","protein trichome birefringence-like 38","-","-","-","-"]
[10,18001784,"INDEL","GAC","G","frameshift_variant","Vradi10g10350","probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9","-","-","ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]","ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]"]
[10,18001844,"SNP","C","T","splice_acceptor_variant","Vradi10g10350","probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9","-","-","ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]","ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]"]
[10,18002236,"SNP","G","C","stop_gained","Vradi10g10350","probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9","-","-","ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]","ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]"]
[10,18263349,"INDEL","C","CTT","frameshift_variant","Vradi10g10610","Alpha-1,4 glucan phosphorylase (EC 2.4.1.1)","carbohydrate metabolic process [GO:0005975]","-","glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]","glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]; carbohydrate metabolic process [GO:0005975]"]
[10,18303089,"INDEL","T","TTGTC","frameshift_variant","Vradi10g10670","ethylene-responsive transcription factor 4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[10,18665719,"INDEL","GTGCTTTGGAAATGA","G","frameshift_variant","Vradi10g11040","stem-specific protein TSJT1","-","-","-","-"]
[10,18708682,"SNP","G","A","stop_gained","Vradi10g11100","probable polyol transporter 4","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[10,18863619,"SNP","A","G","stop_lost","Vradi10g11270","-","-","-","-","-"]
[10,18863819,"SNP","C","T","stop_gained","Vradi10g11260","uncharacterized protein LOC106775443","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,18863820,"SNP","G","T","stop_gained","Vradi10g11270","-","-","-","-","-"]
[10,18863879,"INDEL","CT","C","frameshift_variant","Vradi10g11270","-","-","-","-","-"]
[10,18863992,"SNP","G","A","stop_gained","Vradi10g11270","-","-","-","-","-"]
[10,18984399,"SNP","T","A","splice_donor_variant","Vradi10g11400","uncharacterized protein LOC106775373","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,18998006,"INDEL","C","CAA","frameshift_variant","Vradi10g11410","pre-mRNA-splicing factor SYF1","mRNA processing [GO:0006397]","nucleus [GO:0005634]","-","nucleus [GO:0005634]; mRNA processing [GO:0006397]"]
[10,19071953,"INDEL","GA","GAA","frameshift_variant&start_lost","Vradi10g11500","-","-","-","-","-"]
[10,19161276,"SNP","G","A","stop_gained","Vradi10g11600","uncharacterized protein LOC106775226","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,19161324,"SNP","G","A","stop_gained","Vradi10g11600","uncharacterized protein LOC106775226","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,19193696,"INDEL","G","GTA","splice_donor_variant","Vradi10g11630","-","-","-","-","-"]
[10,19219626,"INDEL","GT","G","frameshift_variant","Vradi10g11640","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; recognition of pollen [GO:0048544]"]
[10,19226308,"SNP","C","T","stop_gained","Vradi10g11640","Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]; recognition of pollen [GO:0048544]"]
[10,19342958,"INDEL","G","GA","frameshift_variant","Vradi10g11820","putative cysteine-rich receptor-like protein kinase 9","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[10,19342964,"INDEL","GTGAGC","G","frameshift_variant","Vradi10g11820","putative cysteine-rich receptor-like protein kinase 9","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[10,19343111,"INDEL","G","GTA","frameshift_variant","Vradi10g11820","putative cysteine-rich receptor-like protein kinase 9","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[10,19343651,"INDEL","GACAGGGATTATGT","G","frameshift_variant","Vradi10g11820","putative cysteine-rich receptor-like protein kinase 9","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[10,19344379,"INDEL","CTCTA","C","frameshift_variant","Vradi10g11820","putative cysteine-rich receptor-like protein kinase 9","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[10,19344426,"INDEL","GC","G","frameshift_variant","Vradi10g11820","putative cysteine-rich receptor-like protein kinase 9","-","-","kinase activity [GO:0016301]","kinase activity [GO:0016301]"]
[10,19350261,"SNP","C","A","start_lost","Vradi10g11830","basic form of pathogenesis-related protein 1","defense response [GO:0006952]","extracellular region [GO:0005576]","-","extracellular region [GO:0005576]; defense response [GO:0006952]"]
[10,19441252,"SNP","G","T","splice_acceptor_variant","Vradi10g11930","Inorganic diphosphatase (EC 3.6.1.1)","phosphate-containing compound metabolic process [GO:0006796]","cytoplasm [GO:0005737]","inorganic diphosphatase activity [GO:0004427]; magnesium ion binding [GO:0000287]","cytoplasm [GO:0005737]; inorganic diphosphatase activity [GO:0004427]; magnesium ion binding [GO:0000287]; phosphate-containing compound metabolic process [GO:0006796]"]
[10,19547876,"INDEL","AT","A","frameshift_variant","Vradi10g12040","-","-","-","-","-"]
[10,19547879,"INDEL","T","TG","frameshift_variant","Vradi10g12040","-","-","-","-","-"]
[10,19810610,"INDEL","G","GCTTCTCA","frameshift_variant","Vradi10g12320","dicarboxylate transporter 2.1, chloroplastic","-","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[10,19810648,"INDEL","TC","T","frameshift_variant","Vradi10g12320","dicarboxylate transporter 2.1, chloroplastic","-","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[10,19810840,"SNP","C","T","stop_gained","Vradi10g12320","dicarboxylate transporter 2.1, chloroplastic","-","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[10,19851883,"SNP","G","C","splice_acceptor_variant","Vradi10g12380","polyadenylate-binding protein 2 isoform X3","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[10,19851957,"SNP","C","T","stop_gained","Vradi10g12380","polyadenylate-binding protein 2 isoform X3","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[10,19851967,"INDEL","AAGAT","A","stop_lost","Vradi10g12380","polyadenylate-binding protein 2 isoform X3","-","-","RNA binding [GO:0003723]","RNA binding [GO:0003723]"]
[10,19959261,"INDEL","A","AT","frameshift_variant","Vradi10g12500","uncharacterized protein LOC106780294","-","U5 snRNP [GO:0005682]","-","U5 snRNP [GO:0005682]"]
[10,20148878,"SNP","C","A","stop_gained","Vradi10g12690","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[10,20150331,"INDEL","TC","T","frameshift_variant","Vradi10g12690","Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]","extracellular region [GO:0005576]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]; hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]"]
[10,20282040,"INDEL","ATT","A","frameshift_variant","Vradi10g12800","-","-","-","-","-"]
[10,20321117,"INDEL","TAGGCC","T","frameshift_variant","Vradi10g12840","Ribosome assembly factor mrt4","ribosomal large subunit assembly [GO:0000027]","cytoplasm [GO:0005737]; nucleolus [GO:0005730]","-","cytoplasm [GO:0005737]; nucleolus [GO:0005730]; ribosomal large subunit assembly [GO:0000027]"]
[10,20351724,"INDEL","CT","C","frameshift_variant","Vradi10g12870","sterol 3-beta-glucosyltransferase","-","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]","integral component of membrane [GO:0016021]; transferase activity [GO:0016740]"]
[10,20552840,"INDEL","CTATAGATACGTAGTACCATCAATGGTATATAT","C","splice_donor_variant","Vradi10g13080","UDP-glucose:glycoprotein glucosyltransferase isoform X2","protein glycosylation [GO:0006486]","endoplasmic reticulum lumen [GO:0005788]","UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]","endoplasmic reticulum lumen [GO:0005788]; UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]; protein glycosylation [GO:0006486]"]
[10,20565377,"SNP","C","A","splice_donor_variant","Vradi10g13090","uncharacterized protein LOC106775187 isoform X2","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[10,20736052,"INDEL","ACTCCTGTGCTTCAATATCTTCCTCAACATCAATG","A","frameshift_variant","Vradi10g13300","-","-","-","-","-"]
[10,20968812,"SNP","C","T","stop_gained","Vradi10g13570","-","-","-","-","-"]
[11,131220,"INDEL","TACGGA","T","frameshift_variant","Vradi11g00060","presequence protease 1, chloroplastic/mitochondrial","-","-","metal ion binding [GO:0046872]; peptidase activity [GO:0008233]","metal ion binding [GO:0046872]; peptidase activity [GO:0008233]"]
[11,193696,"INDEL","ATCT","A","start_lost","Vradi11g00120","RNA pseudouridine synthase 4, mitochondrial isoform X1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; pseudouridine synthesis [GO:0001522]"]
[11,263095,"INDEL","AT","A","frameshift_variant&start_lost","Vradi11g00250","vacuolar-sorting receptor 1","-","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]","calcium ion binding [GO:0005509]","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]; calcium ion binding [GO:0005509]"]
[11,270600,"SNP","A","G","splice_acceptor_variant","Vradi11g00280","uncharacterized protein LOC106776933","rRNA base methylation [GO:0070475]; tRNA methylation [GO:0030488]","cytoplasm [GO:0005737]","4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; RNA methyltransferase activity [GO:0008173]","cytoplasm [GO:0005737]; 4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; RNA methyltransferase activity [GO:0008173]; rRNA base methylation [GO:0070475]; tRNA methylation [GO:0030488]"]
[11,594371,"INDEL","TATTGTGGATTACCGCGGTTCCTATGAAACTGAGTTCTATTTTGGTGGATCTTTCCAAATTTTATTCTGATATTTAGTGTCAGCAAA","T","frameshift_variant&splice_acceptor_variant","Vradi11g00590","Chloride channel protein","-","integral component of membrane [GO:0016021]","voltage-gated chloride channel activity [GO:0005247]","integral component of membrane [GO:0016021]; voltage-gated chloride channel activity [GO:0005247]"]
[11,626492,"SNP","C","T","stop_gained","Vradi11g00630","uncharacterized protein LOC106777567 isoform X2","transcription, DNA-templated [GO:0006351]","-","-","transcription, DNA-templated [GO:0006351]"]
[11,798950,"INDEL","C","CTCCACCATCTGTGGAAAGCTTTTCATAAGGATCATTTTGGCAAGATTAGGTCTCCTTTTCCTGCTCAAACGTTCGAGTTAGCCGCTTTCCGACACCTGGTCGAGTTT","frameshift_variant&stop_gained","Vradi11g00790","uncharacterized protein LOC106776575","-","-","-","-"]
[11,810604,"SNP","G","T","splice_donor_variant","Vradi11g00810","pentatricopeptide repeat-containing protein At3g22690","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[11,811327,"INDEL","A","AT","frameshift_variant&stop_lost","Vradi11g00810","pentatricopeptide repeat-containing protein At3g22690","-","-","zinc ion binding [GO:0008270]","zinc ion binding [GO:0008270]"]
[11,820192,"INDEL","T","TCAAATCCCATAATGCCACCGATGTCTCCTCAAATGCAGATGTTCCAGTCATTCCAATTCTCAATTAGTAATACTGTTAAAATTGAACAAGTGACATGA","frameshift_variant&stop_gained","Vradi11g00830","RNA helicase (EC 3.6.4.13)","-","mitochondrial nucleoid [GO:0042645]","ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]","mitochondrial nucleoid [GO:0042645]; ATP binding [GO:0005524]; RNA helicase activity [GO:0003724]"]
[11,851204,"SNP","C","A","stop_gained","Vradi11g00850","probable RNA helicase SDE3","-","-","helicase activity [GO:0004386]","helicase activity [GO:0004386]"]
[11,851718,"INDEL","C","CAA","frameshift_variant","Vradi11g00850","probable RNA helicase SDE3","-","-","helicase activity [GO:0004386]","helicase activity [GO:0004386]"]
[11,851719,"INDEL","TTG","T","frameshift_variant","Vradi11g00850","probable RNA helicase SDE3","-","-","helicase activity [GO:0004386]","helicase activity [GO:0004386]"]
[11,1205455,"SNP","G","T","stop_gained","Vradi11g01300","pentatricopeptide repeat-containing protein At3g18110, chloroplastic","-","-","-","-"]
[11,1205554,"SNP","C","T","stop_gained","Vradi11g01300","pentatricopeptide repeat-containing protein At3g18110, chloroplastic","-","-","-","-"]
[11,1262752,"SNP","G","A","stop_gained","Vradi11g01370","Peptidylprolyl isomerase (EC 5.2.1.8)","-","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]"]
[11,1332875,"INDEL","AAC","A","frameshift_variant","Vradi11g01460","Hydroxymethylbilane synthase (EC 2.5.1.61)","peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]","-","hydroxymethylbilane synthase activity [GO:0004418]","hydroxymethylbilane synthase activity [GO:0004418]; peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]"]
[11,1332880,"INDEL","A","AGG","frameshift_variant","Vradi11g01460","Hydroxymethylbilane synthase (EC 2.5.1.61)","peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]","-","hydroxymethylbilane synthase activity [GO:0004418]","hydroxymethylbilane synthase activity [GO:0004418]; peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]"]
[11,1460157,"INDEL","CCGTG","C","frameshift_variant","tRNA-Ala","-","-","-","-","-"]
[11,1664650,"INDEL","CA","C","frameshift_variant","Vradi11g01830","cation/H(+) antiporter 19-like","-","integral component of membrane [GO:0016021]","solute:proton antiporter activity [GO:0015299]","integral component of membrane [GO:0016021]; solute:proton antiporter activity [GO:0015299]"]
[11,1664715,"INDEL","TGA","T","frameshift_variant","Vradi11g01830","cation/H(+) antiporter 19-like","-","integral component of membrane [GO:0016021]","solute:proton antiporter activity [GO:0015299]","integral component of membrane [GO:0016021]; solute:proton antiporter activity [GO:0015299]"]
[11,1910021,"INDEL","CA","C","frameshift_variant","tRNA-Thr","-","-","-","-","-"]
[11,1985415,"SNP","G","A","splice_acceptor_variant","Vradi11g02160","lysine-specific demethylase rbr-2","methylation [GO:0032259]","nucleus [GO:0005634]","DNA binding [GO:0003677]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]","nucleus [GO:0005634]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]; methylation [GO:0032259]"]
[11,2138187,"SNP","A","G","splice_donor_variant","Vradi11g02330","E3 ubiquitin-protein ligase At1g12760","-","integral component of membrane [GO:0016021]","-","integral component of membrane [GO:0016021]"]
[11,2501213,"INDEL","CA","C","frameshift_variant","Vradi11g02730","LRR receptor kinase BAK1-like","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[11,2686037,"SNP","T","C","start_lost","Vradi11g02930","-","-","-","-","-"]
[11,2727057,"INDEL","AC","A","frameshift_variant","Vradi11g02970","U11/U12 small nuclear ribonucleoprotein 25 kDa protein","mRNA splicing, via spliceosome [GO:0000398]","U12-type spliceosomal complex [GO:0005689]","-","U12-type spliceosomal complex [GO:0005689]; mRNA splicing, via spliceosome [GO:0000398]"]
[11,2802433,"SNP","A","T","stop_gained","Vradi11g03070","Leucyl-tRNA synthetase (EC 6.1.1.4)","leucyl-tRNA aminoacylation [GO:0006429]","-","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]","aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]; leucyl-tRNA aminoacylation [GO:0006429]"]
[11,2838277,"INDEL","G","GT","splice_donor_variant","Vradi11g03110","DNA mismatch repair protein MSH4","mismatch repair [GO:0006298]","-","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,2889338,"SNP","C","T","stop_gained","Vradi11g03150","E3 ubiquitin-protein ligase HOS1 isoform X1","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[11,2918349,"INDEL","TC","T","frameshift_variant","Vradi11g03200","nudix hydrolase 8 isoform X2","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
[11,2918370,"SNP","*","G","frameshift_variant","Vradi11g03200","nudix hydrolase 8 isoform X2","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
[11,2918429,"SNP","*","C","frameshift_variant","Vradi11g03200","nudix hydrolase 8 isoform X2","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
[11,2924386,"INDEL","C","CAATGATGTTTCTGATACTG","frameshift_variant&start_lost","Vradi11g03210","-","-","-","-","-"]
[11,3039993,"SNP","A","T","splice_acceptor_variant","Vradi11g03300","GATA transcription factor 26","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","sequence-specific DNA binding [GO:0043565]; zinc ion binding [GO:0008270]","nucleus [GO:0005634]; sequence-specific DNA binding [GO:0043565]; zinc ion binding [GO:0008270]; regulation of transcription, DNA-templated [GO:0006355]"]
[11,3039994,"SNP","G","C","splice_acceptor_variant","Vradi11g03300","GATA transcription factor 26","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","sequence-specific DNA binding [GO:0043565]; zinc ion binding [GO:0008270]","nucleus [GO:0005634]; sequence-specific DNA binding [GO:0043565]; zinc ion binding [GO:0008270]; regulation of transcription, DNA-templated [GO:0006355]"]
[11,3071047,"SNP","A","T","start_lost","Vradi11g03340","DNA repair endonuclease UVH1 isoform X2","-","-","DNA binding [GO:0003677]; endonuclease activity [GO:0004519]","DNA binding [GO:0003677]; endonuclease activity [GO:0004519]"]
[11,3159369,"INDEL","CACGGACCCTGGCT","C","frameshift_variant","Vradi11g03420","uncharacterized protein LOC106777089","-","-","-","-"]
[11,3159412,"SNP","C","T","stop_gained","Vradi11g03420","uncharacterized protein LOC106777089","-","-","-","-"]
[11,3255641,"INDEL","CCA","C","frameshift_variant","Vradi11g03460","regulator of nonsense transcripts 1 homolog","nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]","cytoplasm [GO:0005737]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; zinc ion binding [GO:0008270]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; zinc ion binding [GO:0008270]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]"]
[11,3265555,"SNP","G","A","stop_gained","Vradi11g03470","putative cytochrome c oxidase subunit 6b-like","-","mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]","-","mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]"]
[11,3429676,"INDEL","GA","G","frameshift_variant","Vradi11g03610","allene oxide synthase 1, chloroplastic-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[11,3440560,"INDEL","T","TGGATTTTTGAAACAGGTATGGTGCC","splice_donor_variant","Vradi11g03620","protein phosphatase 2C 29-like","-","-","protein serine/threonine phosphatase activity [GO:0004722]","protein serine/threonine phosphatase activity [GO:0004722]"]
[11,3445751,"INDEL","CA","C","frameshift_variant","Vradi11g03630","protein ABCI7, chloroplastic","iron-sulfur cluster assembly [GO:0016226]","-","-","iron-sulfur cluster assembly [GO:0016226]"]
[11,3445772,"SNP","G","A","stop_gained","Vradi11g03630","protein ABCI7, chloroplastic","iron-sulfur cluster assembly [GO:0016226]","-","-","iron-sulfur cluster assembly [GO:0016226]"]
[11,3918546,"INDEL","ACCTTC","A","frameshift_variant","Vradi11g04160","PLASMODESMATA CALLOSE-BINDING PROTEIN 4-like","-","-","-","-"]
[11,4103939,"INDEL","TTTTCATAAAATTCAATGTAGGAATTGTCAA","T","frameshift_variant&splice_acceptor_variant","Vradi11g04340","-","-","-","-","-"]
[11,4103991,"INDEL","TGCTGCTGTTGAAG","T","frameshift_variant","Vradi11g04340","-","-","-","-","-"]
[11,4104245,"SNP","C","T","stop_gained","Vradi11g04340","-","-","-","-","-"]
[11,4365120,"INDEL","T","TC","frameshift_variant&stop_lost","Vradi11g04600","AP2-like ethylene-responsive transcription factor TOE3 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]","nucleus [GO:0005634]; DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[11,4889602,"INDEL","TC","T","frameshift_variant","Vradi11g05090","-","-","-","-","-"]
[11,5091978,"INDEL","TG","T","frameshift_variant","Vradi11g05280","protein DA1-related 1","-","-","metal ion binding [GO:0046872]","metal ion binding [GO:0046872]"]
[11,5299894,"INDEL","A","AAT","frameshift_variant","Vradi11g05440","scarecrow-like protein 15","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[11,5309603,"INDEL","CT","C","frameshift_variant","Vradi11g05450","pentatricopeptide repeat-containing protein At5g39350","-","-","-","-"]
[11,5635584,"SNP","C","T","stop_gained","Vradi11g05740","ATPase family AAA domain-containing protein 3C","mitochondrion organization [GO:0007005]","mitochondrion [GO:0005739]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","mitochondrion [GO:0005739]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mitochondrion organization [GO:0007005]"]
[11,5635627,"INDEL","C","CCAATG","frameshift_variant","Vradi11g05740","ATPase family AAA domain-containing protein 3C","mitochondrion organization [GO:0007005]","mitochondrion [GO:0005739]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","mitochondrion [GO:0005739]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mitochondrion organization [GO:0007005]"]
[11,5759890,"INDEL","TGAATTGTAAAACAGAACTTGACACATATTTAACATACCTCTGTGCTACTTACCCTTTTCAATTTAATTCTAGACAATCTCTTCCACCCTTTCATGTTTGTTTATGGG","T","stop_lost","Vradi11g05830","uncharacterized protein LOC106776657","DNA replication [GO:0006260]","-","DNA binding [GO:0003677]","DNA binding [GO:0003677]; DNA replication [GO:0006260]"]
[11,5847022,"INDEL","A","AACCTTG","splice_donor_variant","Vradi11g05940","AAA-ATPase At3g50940 isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]","ATP binding [GO:0005524]; ATPase activity [GO:0016887]"]
[11,6328456,"SNP","C","T","stop_gained","Vradi11g06380","Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[11,6490971,"INDEL","T","TC","frameshift_variant","Vradi11g06460","MLO-like protein","defense response [GO:0006952]; response to biotic stimulus [GO:0009607]","integral component of membrane [GO:0016021]","calmodulin binding [GO:0005516]","integral component of membrane [GO:0016021]; calmodulin binding [GO:0005516]; defense response [GO:0006952]; response to biotic stimulus [GO:0009607]"]
[11,6538932,"INDEL","AGAAAGTATATCATGGGACAGGTTGAT","A","frameshift_variant","Vradi11g06500","histidine kinase 1","-","integral component of membrane [GO:0016021]","phosphorelay sensor kinase activity [GO:0000155]","integral component of membrane [GO:0016021]; phosphorelay sensor kinase activity [GO:0000155]"]
[11,6539139,"SNP","C","T","stop_gained","Vradi11g06500","histidine kinase 1","-","integral component of membrane [GO:0016021]","phosphorelay sensor kinase activity [GO:0000155]","integral component of membrane [GO:0016021]; phosphorelay sensor kinase activity [GO:0000155]"]
[11,6539831,"SNP","C","T","stop_gained","Vradi11g06500","histidine kinase 1","-","integral component of membrane [GO:0016021]","phosphorelay sensor kinase activity [GO:0000155]","integral component of membrane [GO:0016021]; phosphorelay sensor kinase activity [GO:0000155]"]
[11,6551671,"INDEL","T","TGA","frameshift_variant","Vradi11g06510","L-ascorbate peroxidase (EC 1.11.1.11)","response to oxidative stress [GO:0006979]","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; L-ascorbate peroxidase activity [GO:0016688]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; heme binding [GO:0020037]; L-ascorbate peroxidase activity [GO:0016688]; metal ion binding [GO:0046872]; response to oxidative stress [GO:0006979]"]
[11,6551672,"INDEL","ACT","A","frameshift_variant","Vradi11g06510","L-ascorbate peroxidase (EC 1.11.1.11)","response to oxidative stress [GO:0006979]","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; L-ascorbate peroxidase activity [GO:0016688]; metal ion binding [GO:0046872]","integral component of membrane [GO:0016021]; heme binding [GO:0020037]; L-ascorbate peroxidase activity [GO:0016688]; metal ion binding [GO:0046872]; response to oxidative stress [GO:0006979]"]
[11,6812599,"INDEL","TTC","TTCTC","frameshift_variant","Vradi11g06780","bifunctional nuclease 2 isoform X1","-","-","nuclease activity [GO:0004518]","nuclease activity [GO:0004518]"]
[11,7201509,"INDEL","C","CTA","frameshift_variant&stop_lost","Vradi11g07090","protein RKD5 isoform X2","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[11,7300329,"INDEL","AAACCATACCGCTATAATATGCAATAGACAGACCTGATCAATAACAACAAGGGTTCTGCCAGCCACAACTGGAATGAATTTTTTATCCACCTGATGCAAAACTTTAGCATCCTCAAGAAATTTCTTACTGATAGTTTCTGGAATCAATGAATCTCCAGCAAGATGCAATCCGG","A","frameshift_variant&splice_donor_variant","Vradi11g07180","DNA mismatch repair protein MLH3 isoform X4","mismatch repair [GO:0006298]","mismatch repair complex [GO:0032300]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","mismatch repair complex [GO:0032300]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,7300511,"INDEL","C","CT","frameshift_variant","Vradi11g07180","DNA mismatch repair protein MLH3 isoform X4","mismatch repair [GO:0006298]","mismatch repair complex [GO:0032300]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","mismatch repair complex [GO:0032300]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,7300684,"SNP","C","T","stop_gained","Vradi11g07180","DNA mismatch repair protein MLH3 isoform X4","mismatch repair [GO:0006298]","mismatch repair complex [GO:0032300]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","mismatch repair complex [GO:0032300]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,7300699,"INDEL","T","TA","frameshift_variant","Vradi11g07180","DNA mismatch repair protein MLH3 isoform X4","mismatch repair [GO:0006298]","mismatch repair complex [GO:0032300]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","mismatch repair complex [GO:0032300]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,7300706,"INDEL","GA","G","frameshift_variant","Vradi11g07180","DNA mismatch repair protein MLH3 isoform X4","mismatch repair [GO:0006298]","mismatch repair complex [GO:0032300]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","mismatch repair complex [GO:0032300]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,7300708,"INDEL","TC","T","frameshift_variant","Vradi11g07180","DNA mismatch repair protein MLH3 isoform X4","mismatch repair [GO:0006298]","mismatch repair complex [GO:0032300]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","mismatch repair complex [GO:0032300]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,7300711,"INDEL","TGGACATCCTTAGAGAGCAATTCTGA","T","splice_acceptor_variant","Vradi11g07180","DNA mismatch repair protein MLH3 isoform X4","mismatch repair [GO:0006298]","mismatch repair complex [GO:0032300]","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]","mismatch repair complex [GO:0032300]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; mismatched DNA binding [GO:0030983]; mismatch repair [GO:0006298]"]
[11,7339713,"SNP","A","G","stop_lost","Vradi11g07220","pentatricopeptide repeat-containing protein At2g17525, mitochondrial","-","-","-","-"]
[11,7619991,"INDEL","ATCT","A","frameshift_variant&start_lost","Vradi11g07410","Acyltransferase (EC 2.3.1.-)","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[11,7692307,"INDEL","GT","G","frameshift_variant","Vradi11g07450","2-oxoglutarate-dependent dioxygenase DAO","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[11,7692310,"INDEL","AAG","A","frameshift_variant","Vradi11g07450","2-oxoglutarate-dependent dioxygenase DAO","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[11,7729564,"INDEL","AC","A","frameshift_variant","Vradi11g07470","jmjC domain-containing protein 7","-","-","-","-"]
[11,8121097,"INDEL","C","CTTTATTGGTAATGAAGT","frameshift_variant","Vradi11g07790","carbon catabolite repressor protein 4 homolog 4 isoform X3","-","-","-","-"]
[11,8252682,"INDEL","C","CA","frameshift_variant","Vradi11g07860","uncharacterized protein LOC111242043","-","-","-","-"]
[11,8255721,"SNP","G","C","splice_donor_variant","Vradi11g07860","uncharacterized protein LOC111242043","-","-","-","-"]
[11,8265090,"INDEL","CG","C","frameshift_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8265150,"SNP","G","T","stop_gained","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8265210,"INDEL","GC","G","frameshift_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8265407,"INDEL","GATTTATGCAGAGGCTGCTAATAATTGTAAACGTATTCTTGA","G","frameshift_variant&splice_acceptor_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8265780,"SNP","A","T","stop_gained","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8266048,"INDEL","GGATCTGCAGCTCA","G","frameshift_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8266092,"INDEL","T","TACGCGCAGAGGGC","frameshift_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8266316,"INDEL","A","ATACCGAAACT","frameshift_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8266584,"SNP","C","T","stop_gained","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8268538,"SNP","A","G","splice_acceptor_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8268547,"INDEL","GTGCAACAACAGACATTGGATATGTA","G","frameshift_variant","Vradi11g07870","protein NPG1","-","-","-","-"]
[11,8311987,"INDEL","GCCCAATTTCATCCACTGATCGATCCTCAACCTC","G","splice_donor_variant","Vradi11g07920","probable polyamine transporter At1g31830 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[11,8312022,"INDEL","TTCTCA","T","frameshift_variant","Vradi11g07920","probable polyamine transporter At1g31830 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[11,8312130,"INDEL","AT","A","frameshift_variant","Vradi11g07920","probable polyamine transporter At1g31830 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[11,8312132,"INDEL","C","CA","frameshift_variant","Vradi11g07920","probable polyamine transporter At1g31830 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[11,8312217,"SNP","*","T","frameshift_variant","Vradi11g07920","probable polyamine transporter At1g31830 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[11,8312610,"INDEL","AAACC","A","splice_acceptor_variant","Vradi11g07920","probable polyamine transporter At1g31830 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[11,8315661,"INDEL","CA","C","frameshift_variant","Vradi11g07920","probable polyamine transporter At1g31830 isoform X2","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]","integral component of membrane [GO:0016021]; transmembrane transporter activity [GO:0022857]"]
[11,8387177,"INDEL","GTAC","G","splice_donor_variant","Vradi11g07980","Formin-like protein","-","-","phosphoprotein phosphatase activity [GO:0004721]","phosphoprotein phosphatase activity [GO:0004721]"]
[11,8417088,"INDEL","G","GAACTCAAGCTTTTGTAAAGTAGGTTCATGACATGGTAACAT","frameshift_variant","Vradi11g08010","uncharacterized protein LOC106777609","carbohydrate metabolic process [GO:0005975]; positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation [GO:0036086]","-","carbohydrate binding [GO:0030246]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]","carbohydrate binding [GO:0030246]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]; carbohydrate metabolic process [GO:0005975]; positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation [GO:0036086]"]
[11,8455810,"SNP","C","T","splice_donor_variant","Vradi11g08020","-","-","-","-","-"]
[11,8466590,"INDEL","G","GTA","splice_donor_variant","Vradi11g08030","ATP-dependent DNA helicase (EC 3.6.4.12)","DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]","nucleus [GO:0005634]","3'-5' DNA helicase activity [GO:0043138]; ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]","nucleus [GO:0005634]; 3'-5' DNA helicase activity [GO:0043138]; ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]"]
[11,8535096,"INDEL","GCTATCATTCATATCGGGTGGCAAAAAGGCTCCATTCT","G","frameshift_variant","Vradi11g08060","phytochrome-interacting ankyrin-repeat protein 2","-","-","-","-"]
[11,8551025,"INDEL","C","CCTAACTGACTGATCAACGCCA","stop_gained","Vradi11g08070","trihelix transcription factor GT-3b","-","nucleus [GO:0005634]","-","nucleus [GO:0005634]"]
[11,8587662,"INDEL","ATCCACAACCTCCCTATG","A","splice_acceptor_variant","Vradi11g08100","putative pentatricopeptide repeat-containing protein At3g05240","-","-","-","-"]
[11,8871609,"SNP","G","C","splice_acceptor_variant","Vradi11g08280","protein LOW PSII ACCUMULATION 3, chloroplastic","-","-","-","-"]
[11,9569507,"INDEL","TG","T","frameshift_variant","Vradi11g08620","-","-","-","-","-"]
[11,9642031,"SNP","G","A","stop_gained","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9642057,"INDEL","TTG","T","frameshift_variant","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9642072,"INDEL","A","AT","frameshift_variant","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9642145,"INDEL","C","CTA","frameshift_variant","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9642147,"INDEL","AAG","A","frameshift_variant","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9642173,"INDEL","AAGCC","A","frameshift_variant","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9642254,"SNP","C","T","splice_acceptor_variant","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9649999,"SNP","G","A","stop_gained","Vradi11g08650","inactive poly [ADP-ribose] polymerase RCD1","-","-","NAD+ ADP-ribosyltransferase activity [GO:0003950]","NAD+ ADP-ribosyltransferase activity [GO:0003950]"]
[11,9673724,"INDEL","AC","A","frameshift_variant","Vradi11g08670","uncharacterized protein LOC106777226","-","-","-","-"]
[11,9673765,"SNP","G","A","stop_gained","Vradi11g08670","uncharacterized protein LOC106777226","-","-","-","-"]
[11,9673792,"INDEL","C","CAT","frameshift_variant","Vradi11g08670","uncharacterized protein LOC106777226","-","-","-","-"]
[11,9673837,"INDEL","G","GA","frameshift_variant","Vradi11g08670","uncharacterized protein LOC106777226","-","-","-","-"]
[11,9673852,"INDEL","G","GCA","frameshift_variant","Vradi11g08670","uncharacterized protein LOC106777226","-","-","-","-"]
[11,9673888,"INDEL","AGTCCCTTCGCAAC","A","frameshift_variant","Vradi11g08670","uncharacterized protein LOC106777226","-","-","-","-"]
[11,9757618,"SNP","C","A","stop_gained","Vradi11g08730","pentatricopeptide repeat-containing protein At1g63130, mitochondrial","-","-","-","-"]
[11,10354233,"INDEL","G","GTGGTGCTTCCATTTTT","frameshift_variant","Vradi11g09020","-","-","-","-","-"]
[11,10354311,"SNP","G","A","stop_gained","Vradi11g09020","-","-","-","-","-"]
[11,10356394,"INDEL","GC","G","frameshift_variant","Vradi11g09020","-","-","-","-","-"]
[11,10356432,"SNP","T","C","splice_acceptor_variant","Vradi11g09020","-","-","-","-","-"]
[11,10523434,"SNP","G","A","stop_gained","Vradi11g09140","-","-","-","-","-"]
[11,10571673,"SNP","G","T","stop_gained","Vradi11g09160","agglutinin-2-like","-","-","carbohydrate binding [GO:0030246]","carbohydrate binding [GO:0030246]"]
[11,10571868,"SNP","G","T","stop_gained","Vradi11g09160","agglutinin-2-like","-","-","carbohydrate binding [GO:0030246]","carbohydrate binding [GO:0030246]"]
[11,10600133,"INDEL","TTTACCTGG","T","frameshift_variant","Vradi11g09180","-","-","-","-","-"]
[11,10746349,"SNP","G","A","stop_gained","Vradi11g09240","kinesin-like protein KIN-14R","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; microtubule-based movement [GO:0007018]"]
[11,11030042,"INDEL","T","TTG","frameshift_variant","Vradi11g09380","-","-","-","-","-"]
[11,11030043,"INDEL","GTA","G","frameshift_variant","Vradi11g09380","-","-","-","-","-"]
[11,11030086,"INDEL","G","GA","frameshift_variant","Vradi11g09380","-","-","-","-","-"]
[11,11030089,"INDEL","AG","A","frameshift_variant","Vradi11g09380","-","-","-","-","-"]
[11,11163265,"INDEL","C","CGCGGCA","start_lost","Vradi11g09430","kinesin-like protein KIN-14B isoform X1","chloroplast accumulation movement [GO:0009904]; microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]; chloroplast accumulation movement [GO:0009904]; microtubule-based movement [GO:0007018]"]
[11,12500949,"SNP","C","T","splice_donor_variant","Vradi11g09940","BTB/POZ domain-containing protein At1g67900","protein ubiquitination [GO:0016567]","-","-","protein ubiquitination [GO:0016567]"]
[11,12554236,"INDEL","G","GT","frameshift_variant","Vradi11g09960","Protein DETOXIFICATION (Multidrug and toxic compound extrusion protein)","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]","integral component of membrane [GO:0016021]; antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
[11,12605460,"SNP","G","T","stop_gained","Vradi11g09970","aspartyl protease family protein At5g10770-like","-","-","aspartic-type endopeptidase activity [GO:0004190]","aspartic-type endopeptidase activity [GO:0004190]"]
[11,13860127,"SNP","C","T","stop_gained","Vradi11g10360","uncharacterized protein LOC111241863","-","-","-","-"]
[11,15034422,"SNP","C","T","splice_donor_variant","Vradi11g10640","1,4-alpha-D-glucan glucanohydrolase (EC 3.2.1.1)","carbohydrate metabolic process [GO:0005975]","-","alpha-amylase activity [GO:0004556]; alpha-amylase activity (releasing maltohexaose) [GO:0103025]; calcium ion binding [GO:0005509]","alpha-amylase activity [GO:0004556]; alpha-amylase activity (releasing maltohexaose) [GO:0103025]; calcium ion binding [GO:0005509]; carbohydrate metabolic process [GO:0005975]"]
[11,15133719,"INDEL","TTA","T","frameshift_variant","Vradi11g10690","-","-","-","-","-"]
[11,15320323,"SNP","G","A","stop_gained","Vradi11g10750","-","-","-","-","-"]
[11,15321168,"SNP","G","A","stop_gained","Vradi11g10750","-","-","-","-","-"]
[11,15321275,"SNP","G","T","stop_gained","Vradi11g10750","-","-","-","-","-"]
[11,15321331,"SNP","C","T","start_lost","Vradi11g10750","-","-","-","-","-"]
[11,15749205,"INDEL","C","CAG","frameshift_variant","Vradi11g10910","uncharacterized protein LOC106777771","-","-","-","-"]
[11,16132131,"INDEL","ATCGTCTTATAAATTAATTTTATAAAAAATAATGATCACGATCACAATGATGAC","A","bidirectional_gene_fusion","Vradi11g11110&mir-598","-","-","-","-","-"]
[11,16379291,"SNP","G","T","stop_gained","Vradi11g11360","uncharacterized protein LOC106777546","-","-","-","-"]
[11,16745764,"INDEL","G","GTA","splice_donor_variant","Vradi11g11650","-","-","-","-","-"]
[11,17315557,"INDEL","GGAGAAGTGGTGGAGGTAGTGAGGTTGGGAATTCA","G","frameshift_variant","Vradi11g12080","-","-","-","-","-"]
[11,17435915,"INDEL","GAA","G","frameshift_variant","Vradi11g12150","-","-","-","-","-"]
[11,17435918,"INDEL","GCAGC","G","frameshift_variant","Vradi11g12150","-","-","-","-","-"]
[11,17856619,"INDEL","G","GTA","frameshift_variant","Vradi11g12430","importin-9 isoform X2","intracellular protein transport [GO:0006886]","-","small GTPase binding [GO:0031267]","small GTPase binding [GO:0031267]; intracellular protein transport [GO:0006886]"]
[11,18338697,"SNP","G","A","stop_gained","Vradi11g12660","-","-","-","-","-"]
[11,18412992,"SNP","C","A","stop_gained","Vradi11g12690","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]","integral component of membrane [GO:0016021]; ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[11,18472355,"INDEL","CTGAAA","C","splice_acceptor_variant","Vradi11g12730","DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X4","-","-","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]"]
[11,18826658,"INDEL","A","AT","frameshift_variant","Vradi11g12930","S-adenosylmethionine synthase (EC 2.5.1.6)","one-carbon metabolic process [GO:0006730]; S-adenosylmethionine biosynthetic process [GO:0006556]","cytoplasm [GO:0005737]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; methionine adenosyltransferase activity [GO:0004478]","cytoplasm [GO:0005737]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; methionine adenosyltransferase activity [GO:0004478]; one-carbon metabolic process [GO:0006730]; S-adenosylmethionine biosynthetic process [GO:0006556]"]
[11,18904780,"SNP","T","G","splice_acceptor_variant","Vradi11g12960","transcription factor HHO2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]","nucleus [GO:0005634]; DNA binding [GO:0003677]"]
[11,18980736,"SNP","G","A","splice_acceptor_variant","Vradi11g13000","protein VAC14 homolog isoform X1","phosphatidylinositol biosynthetic process [GO:0006661]","PAS complex [GO:0070772]","-","PAS complex [GO:0070772]; phosphatidylinositol biosynthetic process [GO:0006661]"]
[11,18991271,"INDEL","A","AG","frameshift_variant","Vradi11g13000","protein VAC14 homolog isoform X1","phosphatidylinositol biosynthetic process [GO:0006661]","PAS complex [GO:0070772]","-","PAS complex [GO:0070772]; phosphatidylinositol biosynthetic process [GO:0006661]"]
[11,18995835,"INDEL","CG","C","frameshift_variant","Vradi11g13010","-","-","-","-","-"]
[11,19241258,"SNP","C","T","stop_gained","Vradi11g13170","-","-","-","-","-"]

{"sheet":"Table S4","index":3,"n_rows":674,"n_cols":4,"rows_kept":674,"flags":["formulas_cached_only"]}
["Supplementary Table 4 Genome scan of synonymous and non-synonymous SNPs from genes in all landraces in 500-kb non-overlapping windows"]
["Chromosome","Bin start position (bp)","Bin end position (bp)","N/S ratio"]
["Chr1",0,500000,{"v":0.27586206896551724,"d":"0.28"}]
["Chr1",500000,1000000,{"v":1.2816901408450705,"d":"1.28"}]
["Chr1",1000000,1500000,{"v":0.358974358974359,"d":"0.36"}]
["Chr1",1500000,2000000,{"v":0.43859649122807015,"d":"0.44"}]
["Chr1",2000000,2500000,{"v":0.3229166666666667,"d":"0.32"}]
["Chr1",2500000,3000000,{"v":0.2932330827067669,"d":"0.29"}]
["Chr1",3000000,3500000,{"v":1.103448275862069,"d":"1.10"}]
["Chr1",3500000,4000000,{"v":4.333333333333333,"d":"4.33"}]
["Chr1",4000000,4500000,{"v":0.23809523809523808,"d":"0.24"}]
["Chr1",4500000,5000000,{"v":0.2416452442159383,"d":"0.24"}]
["Chr1",5000000,5500000,{"v":0.5658914728682171,"d":"0.57"}]
["Chr1",5500000,6000000,{"v":0.17785234899328858,"d":"0.18"}]
["Chr1",6000000,6500000,{"v":0.12209302325581395,"d":"0.12"}]
["Chr1",6500000,7000000,{"v":0.38247011952191234,"d":"0.38"}]
["Chr1",7000000,7500000,{"v":0.23660714285714285,"d":"0.24"}]
["Chr1",7500000,8000000,{"v":0.44785276073619634,"d":"0.45"}]
["Chr1",8000000,8500000,{"v":0.11734693877551021,"d":"0.12"}]
["Chr1",8500000,9000000,{"v":0.034722222222222224,"d":"0.03"}]
["Chr1",9000000,9500000,{"v":0.5531914893617021,"d":"0.55"}]
["Chr1",9500000,10000000,{"v":0.7304347826086957,"d":"0.73"}]
["Chr1",10000000,10500000,{"v":0.5806451612903226,"d":"0.58"}]
["Chr1",10500000,11000000,0.26]
["Chr1",11000000,11500000,{"v":0.7037037037037037,"d":"0.70"}]
["Chr1",11500000,12000000,{"v":0.5230769230769231,"d":"0.52"}]
["Chr1",12000000,12500000,{"v":0.6461538461538462,"d":"0.65"}]
["Chr1",12500000,13000000,{"v":0.4943820224719101,"d":"0.49"}]
["Chr1",13000000,13500000,{"v":0.5517241379310345,"d":"0.55"}]
["Chr1",13500000,14000000,{"v":2.857142857142857,"d":"2.86"}]
["Chr1",14000000,14500000,{"v":1,"d":"1.00"}]
["Chr1",14500000,15000000,{"v":0.9761904761904762,"d":"0.98"}]
["Chr1",15000000,15500000,{"v":0.3090909090909091,"d":"0.31"}]
["Chr1",15500000,16000000,{"v":0.012987012987012988,"d":"0.01"}]
["Chr1",16000000,16500000,{"v":0.10071942446043165,"d":"0.10"}]
["Chr1",16500000,17000000,{"v":0,"d":"0.00"}]
["Chr1",17000000,17500000,{"v":0.46153846153846156,"d":"0.46"}]
["Chr1",17500000,18000000,{"v":0.6666666666666666,"d":"0.67"}]
["Chr1",18000000,18500000,{"v":1.1176470588235294,"d":"1.12"}]
["Chr1",18500000,19000000,{"v":0.7936507936507936,"d":"0.79"}]
["Chr1",19000000,19500000,{"v":0.7605633802816901,"d":"0.76"}]
["Chr1",19500000,20000000,{"v":0.23076923076923078,"d":"0.23"}]
["Chr1",20000000,20500000,{"v":2.857142857142857,"d":"2.86"}]
["Chr1",20500000,21000000,{"v":0.9230769230769231,"d":"0.92"}]
["Chr1",21000000,21500000,{"v":0.925,"d":"0.93"}]
["Chr1",21500000,22000000,{"v":0.4444444444444444,"d":"0.44"}]
["Chr1",22000000,22500000,{"v":0.6607142857142857,"d":"0.66"}]
["Chr1",22500000,23000000,{"v":0.30952380952380953,"d":"0.31"}]
["Chr1",23000000,23500000,{"v":0.07692307692307693,"d":"0.08"}]
["Chr1",23500000,24000000,{"v":2.5,"d":"2.50"}]
["Chr1",24000000,24500000,{"v":1.0666666666666667,"d":"1.07"}]
["Chr1",24500000,25000000,{"v":1.0408163265306123,"d":"1.04"}]
["Chr1",25000000,25500000,{"v":0.719626168224299,"d":"0.72"}]
["Chr1",25500000,26000000,{"v":0.8188405797101449,"d":"0.82"}]
["Chr1",26000000,26500000,0.92]
["Chr1",26500000,27000000,{"v":1.6818181818181819,"d":"1.68"}]
["Chr1",27000000,27500000,{"v":1.4705882352941178,"d":"1.47"}]
["Chr1",27500000,28000000,{"v":0.9402985074626866,"d":"0.94"}]
["Chr1",28000000,28500000,{"v":1.875,"d":"1.88"}]
["Chr1",28500000,29000000,{"v":1.6444444444444444,"d":"1.64"}]
["Chr1",29000000,29500000,{"v":1.0980392156862746,"d":"1.10"}]
["Chr1",29500000,30000000,{"v":2,"d":"2.00"}]
["Chr1",30000000,30500000,{"v":0.9856115107913669,"d":"0.99"}]
["Chr1",30500000,31000000,{"v":1.9024390243902438,"d":"1.90"}]
["Chr1",31000000,31500000,{"v":0.23076923076923078,"d":"0.23"}]
["Chr1",31500000,32000000,{"v":0.2196969696969697,"d":"0.22"}]
["Chr1",32000000,32500000,{"v":0.6,"d":"0.60"}]
["Chr1",32500000,33000000,{"v":1.4,"d":"1.40"}]
["Chr1",33000000,33500000,{"v":0.9454545454545454,"d":"0.95"}]
["Chr1",33500000,34000000,{"v":0.14772727272727273,"d":"0.15"}]
["Chr1",34000000,34500000,0.64]
["Chr1",34500000,35000000,{"v":0.8536585365853658,"d":"0.85"}]
["Chr1",35000000,35500000,{"v":0.5957446808510638,"d":"0.60"}]
["Chr1",35500000,36000000,{"v":1.4094488188976377,"d":"1.41"}]
["Chr1",36000000,36500000,{"v":1.4754098360655739,"d":"1.48"}]
["Chr1",36500000,36501346,{"v":0,"d":"0.00"}]
["Chr2",0,500000,1.25]
["Chr2",500000,1000000,{"v":0.7070063694267515,"d":"0.71"}]
["Chr2",1000000,1500000,{"v":0.7466666666666667,"d":"0.75"}]
["Chr2",1500000,2000000,{"v":0.034482758620689655,"d":"0.03"}]
["Chr2",2000000,2500000,{"v":0.9590163934426229,"d":"0.96"}]
["Chr2",2500000,3000000,{"v":0.8275862068965517,"d":"0.83"}]
["Chr2",3000000,3500000,{"v":0.5294117647058824,"d":"0.53"}]
["Chr2",3500000,4000000,{"v":0.8611111111111112,"d":"0.86"}]
["Chr2",4000000,4500000,{"v":1.5045045045045045,"d":"1.50"}]
["Chr2",4500000,5000000,{"v":0.46017699115044247,"d":"0.46"}]
["Chr2",5000000,5500000,{"v":0.9032258064516129,"d":"0.90"}]
["Chr2",5500000,6000000,{"v":2.4,"d":"2.40"}]
["Chr2",6000000,6500000,{"v":1.096774193548387,"d":"1.10"}]
["Chr2",6500000,7000000,{"v":0.9024390243902439,"d":"0.90"}]
["Chr2",7000000,7500000,{"v":1.4074074074074074,"d":"1.41"}]
["Chr2",7500000,8000000,{"v":0.42857142857142855,"d":"0.43"}]
["Chr2",8000000,8500000,{"v":1.0588235294117647,"d":"1.06"}]
["Chr2",8500000,9000000,{"v":0.3333333333333333,"d":"0.33"}]
["Chr2",9000000,9500000,{"v":1.6,"d":"1.60"}]
["Chr2",9500000,10000000,{"v":0.53125,"d":"0.53"}]
["Chr2",10000000,10500000,{"v":0.6190476190476191,"d":"0.62"}]
["Chr2",10500000,11000000,{"v":0.058823529411764705,"d":"0.06"}]
["Chr2",11000000,11500000,{"v":1.0689655172413792,"d":"1.07"}]
["Chr2",11500000,12000000,{"v":0.8823529411764706,"d":"0.88"}]
["Chr2",12000000,12500000,{"v":0.6296296296296297,"d":"0.63"}]
["Chr2",12500000,13000000,{"v":1.4565217391304348,"d":"1.46"}]
["Chr2",13000000,13500000,1.84]
["Chr2",13500000,14000000,{"v":1.894736842105263,"d":"1.89"}]
["Chr2",14000000,14500000,{"v":1.1008403361344539,"d":"1.10"}]
["Chr2",14500000,15000000,{"v":1.0465116279069768,"d":"1.05"}]
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["Chr10",18500000,19000000,{"v":0.927710843373494,"d":"0.93"}]
["Chr10",19000000,19500000,{"v":1.1694915254237288,"d":"1.17"}]
["Chr10",19500000,20000000,{"v":0.9767441860465116,"d":"0.98"}]
["Chr10",20000000,20500000,{"v":1.046875,"d":"1.05"}]
["Chr10",20500000,20996616,{"v":1.1063829787234043,"d":"1.11"}]
["Chr11",0,500000,{"v":1.1296296296296295,"d":"1.13"}]
["Chr11",500000,1000000,{"v":0.9215686274509803,"d":"0.92"}]
["Chr11",1000000,1500000,{"v":0.5714285714285714,"d":"0.57"}]
["Chr11",1500000,2000000,{"v":0.7727272727272727,"d":"0.77"}]
["Chr11",2000000,2500000,{"v":0.42857142857142855,"d":"0.43"}]
["Chr11",2500000,3000000,{"v":0.9111111111111111,"d":"0.91"}]
["Chr11",3000000,3500000,{"v":0.6818181818181818,"d":"0.68"}]
["Chr11",3500000,4000000,{"v":0.3,"d":"0.30"}]
["Chr11",4000000,4500000,{"v":1.8,"d":"1.80"}]
["Chr11",4500000,5000000,{"v":0.5555555555555556,"d":"0.56"}]
["Chr11",5000000,5500000,{"v":1.2727272727272727,"d":"1.27"}]
["Chr11",5500000,6000000,{"v":0.974025974025974,"d":"0.97"}]
["Chr11",6000000,6500000,{"v":0.22093023255813954,"d":"0.22"}]
["Chr11",6500000,7000000,{"v":0.7222222222222222,"d":"0.72"}]
["Chr11",7000000,7500000,{"v":0.3108108108108108,"d":"0.31"}]
["Chr11",7500000,8000000,{"v":2.2941176470588234,"d":"2.29"}]
["Chr11",8000000,8500000,{"v":0.3482587064676617,"d":"0.35"}]
["Chr11",8500000,9000000,{"v":0.2711864406779661,"d":"0.27"}]
["Chr11",9000000,9500000,{"v":0.42857142857142855,"d":"0.43"}]
["Chr11",9500000,10000000,1.04]
["Chr11",10000000,10500000,{"v":1.0317460317460319,"d":"1.03"}]
["Chr11",10500000,11000000,{"v":1.1666666666666667,"d":"1.17"}]
["Chr11",11000000,11500000,{"v":1.1851851851851851,"d":"1.19"}]
["Chr11",11500000,12000000,{"v":0.8666666666666667,"d":"0.87"}]
["Chr11",12000000,12500000,{"v":1.2,"d":"1.20"}]
["Chr11",12500000,13000000,{"v":1,"d":"1.00"}]
["Chr11",13000000,13500000,{"v":6,"d":"6.00"}]
["Chr11",13500000,14000000,{"v":0,"d":"0.00"}]
["Chr11",14000000,14500000,{"v":3.5,"d":"3.50"}]
["Chr11",14500000,15000000,{"v":0.6666666666666666,"d":"0.67"}]
["Chr11",15000000,15500000,{"v":1,"d":"1.00"}]
["Chr11",15500000,16000000,{"v":0,"d":"0.00"}]
["Chr11",16000000,16500000,{"v":1,"d":"1.00"}]
["Chr11",16500000,17000000,{"v":1.3,"d":"1.30"}]
["Chr11",17000000,17500000,{"v":0.6923076923076923,"d":"0.69"}]
["Chr11",17500000,18000000,{"v":0.868421052631579,"d":"0.87"}]
["Chr11",18000000,18500000,{"v":2.5714285714285716,"d":"2.57"}]
["Chr11",18500000,19000000,{"v":0.07547169811320754,"d":"0.08"}]
["Chr11",19000000,19500000,{"v":1.7692307692307692,"d":"1.77"}]
["Chr11",19500000,19732206,{"v":0.45454545454545453,"d":"0.45"}]

{"sheet":"Table S5","index":4,"n_rows":674,"n_cols":8,"rows_kept":674,"merged":[[2,0,9,0],[10,0,26,0],[27,0,37,0],[38,0,42,0],[43,0,78,0],[79,0,128,0],[129,0,175,0],[176,0,199,0],[200,0,211,0],[212,0,224,0],[225,0,237,0],[238,0,271,0],[272,0,279,0],[280,0,293,0],[294,0,315,0],[316,0,356,0],[357,0,397,0],[398,0,450,0],[451,0,476,0],[477,0,484,0],[485,0,488,0],[489,0,530,0],[531,0,538,0],[539,0,555,0],[556,0,567,0],[568,0,587,0],[588,0,608,0],[609,0,628,0],[629,0,639,0],[640,0,649,0],[650,0,673,0]],"flags":["formulas_cached_only"]}
["Supplementary Table 5 Gene annotation of genomic regions showing high (>2.5) non-synonymous to synonymous ratio"]
["Region","Gene ID","Start (bp)","End (bp)","Protein names","Biological process (GO)","Ccellular component (GO)","Molecular function (GO)"]
["Chr1:3500000-4000000","Vradi01g01890",3574961,3579471,"uncharacterized protein LOC106755715","-","-","-"]
[null,"Vradi01g01900",3707195,3713031,"uncharacterized protein LOC106774881","-","-","-"]
[null,"Vradi01g01910",3860571,3861886,"protein TORNADO 2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi01g01920",3927350,3930647,"-","-","-","-"]
[null,"Vradi01g01930",3933914,3934978,"putative RING-H2 finger protein ATL53","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi01g01940",3970420,3972658,"transcription factor bHLH71","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]"]
[null,"Vradi01g01950",3973792,3981590,"uncharacterized protein At4g17910-like isoform X2","GPI anchor biosynthetic process [GO:0006506]","integral component of membrane [GO:0016021]","transferase activity, transferring acyl groups [GO:0016746]"]
[null,"Vradi01g01960",3988033,3991977,"zinc finger CCCH domain-containing protein 12 isoform X2","-","-","DNA binding [GO:0003677]; metal ion binding [GO:0046872]"]
["Chr1:13500000-14000000","Vradi01g08250",13509137,13510868,"WUSCHEL-related homeobox 11 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi01g08260",13549906,13552921,"cyclic dof factor 1-like isoform X3","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi01g08270",13582010,13595622,"sulfite oxidase","-","-","molybdenum ion binding [GO:0030151]; oxidoreductase activity [GO:0016491]"]
[null,"Vradi01g08280",13610618,13611040,"-","-","-","-"]
[null,"Vradi01g08290",13667689,13670618,"Pectate lyase (EC 4.2.2.2)","pectin catabolic process [GO:0045490]","cell wall [GO:0005618]","metal ion binding [GO:0046872]; pectate lyase activity [GO:0030570]"]
[null,"Vradi01g08300",13721040,13724707,"Glycerol-3-phosphate dehydrogenase [NAD(+)] (EC 1.1.1.8)","carbohydrate metabolic process [GO:0005975]; glycerol-3-phosphate catabolic process [GO:0046168]","glycerol-3-phosphate dehydrogenase complex [GO:0009331]","glycerol-3-phosphate dehydrogenase [NAD+] activity [GO:0004367]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]"]
[null,"Vradi01g08310",13727487,13731252,"protein ABHD17B","-","-","-"]
[null,"Vradi01g08320",13753033,13753398,"uncharacterized protein LOC106767187","-","-","-"]
[null,"Vradi01g08330",13814579,13817296,"Translation elongation factor 1-alpha (Translation elongation factor 1a) (Fragment)","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]; translation elongation factor activity [GO:0003746]"]
[null,"Vradi01g08340",13823462,13827449,"ras-related protein RABB1b isoform X2","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]"]
[null,"Vradi01g08350",13850574,13858140,"pre-rRNA-processing protein esf2","-","nucleolus [GO:0005730]","RNA binding [GO:0003723]"]
[null,"Vradi01g08360",13862555,13869805,"pentatricopeptide repeat-containing protein At4g35850, mitochondrial","-","-","-"]
[null,"Vradi01g08370",13901305,13905661,"E3 ubiquitin-protein ligase RGLG2 isoform X1","-","-","-"]
[null,"Vradi01g08380",13938697,13939929,"-","-","-","-"]
[null,"Vradi01g08390",13956251,13965881,"plastidic glucose transporter 4","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi01g08400",13967298,13975436,"glutamate-rich WD repeat-containing protein 1","-","nucleus [GO:0005634]","-"]
[null,"Vradi01g08410",13984484,13985727,"uncharacterized protein LOC106767924","-","-","-"]
["Chr1:20000000-20500000","Vradi01g10180",20026663,20031072,"CHD3-type chromatin-remodeling factor PICKLE isoform X3","-","-","-"]
[null,"Vradi01g10190",20084123,20091340,"-","-","-","-"]
[null,"Vradi01g10200",20137821,20146447,"Somatic embryogenesis receptor kinase 1 (Fragment)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; signaling receptor binding [GO:0005102]; transmembrane receptor protein serine/threonine kinase activity [GO:0004675]"]
[null,"Vradi01g10210",20153233,20154621,"-","-","-","-"]
[null,"Vradi01g10220",20170704,20173403,"pentatricopeptide repeat-containing protein At2g13600","-","-","zinc ion binding [GO:0008270]"]
[null,"Vradi01g10230",20186345,20191762,"uncharacterized protein LOC106773359","protein transport [GO:0015031]","-","-"]
[null,"Vradi01g10240",20212190,20213833,"-","-","-","-"]
[null,"Vradi01g10250",20249141,20252384,"protein DMP7","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi01g10260",20265204,20271829,"uncharacterized protein LOC106765196","-","-","-"]
[null,"Vradi01g10270",20293755,20296265,"Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[null,"Vradi01g10280",20419062,20422406,"Protein DETOXIFICATION (Multidrug and toxic compound extrusion protein)","-","integral component of membrane [GO:0016021]","antiporter activity [GO:0015297]; xenobiotic transmembrane transporter activity [GO:0042910]"]
["Chr1:23500000-24000000","Vradi01g11770",23687469,23691641,"tryptophan aminotransferase-related protein 4-like","-","-","carbon-sulfur lyase activity [GO:0016846]; transaminase activity [GO:0008483]"]
[null,"Vradi01g11780",23896117,23901759,"uncharacterized protein LOC106772481","-","-","-"]
[null,"Vradi01g11790",23902822,23903901,"-","-","-","-"]
[null,"Vradi01g11800",23944211,23945899,"Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]"]
[null,"Vradi01g11810",23986320,23997634,"S-acyltransferase (EC 2.3.1.225) (Palmitoyltransferase)","-","integral component of membrane [GO:0016021]","protein-cysteine S-palmitoyltransferase activity [GO:0019706]"]
["Chr5:10500000-11500000","Vradi05g05560",10515586,10518840,"amino-acid permease BAT1 homolog","amino acid transport [GO:0006865]","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi05g05570",10518781,10527387,"lipase-like PAD4","lipid metabolic process [GO:0006629]","nucleus [GO:0005634]","-"]
[null,"Vradi05g05580",10530545,10531252,"uncharacterized protein LOC106761642","-","-","-"]
[null,"Vradi05g05590",10555154,10555635,"-","-","-","-"]
[null,"Vradi05g05600",10592117,10592713,"-","-","-","-"]
[null,"Vradi05g05610",10625011,10640266,"ultraviolet-B receptor UVR8","-","-","-"]
[null,"Vradi05g05620",10660360,10668175,"auxilin-related protein 2 isoform X2","-","-","-"]
[null,"Vradi05g05630",10669151,10674898,"amino acid permease 4 isoform X1","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]"]
[null,"Vradi05g05640",10699759,10706190,"amino acid permease 4","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]"]
[null,"Vradi05g05650",10709265,10711924,"-","-","-","-"]
[null,"Vradi05g05660",10743119,10750843,"uncharacterized protein LOC106762549 isoform X2","-","-","-"]
[null,"Vradi05g05670",10762607,10769837,"probable glucan 1,3-alpha-glucosidase","carbohydrate metabolic process [GO:0005975]","-","carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]"]
[null,"Vradi05g05680",10785101,10786005,"uncharacterized protein LOC106761589 isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g05690",10811002,10818928,"uncharacterized protein LOC106762770 isoform X1","-","-","-"]
[null,"Vradi05g05700",10845866,10847087,"F-box protein At1g67340","-","-","-"]
[null,"Vradi05g05710",10884618,10884878,"-","-","-","-"]
[null,"Vradi05g05720",10903396,10905513,"Putative heme chaperone (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial)","porphyrin-containing compound biosynthetic process [GO:0006779]","cytoplasm [GO:0005737]","4 iron, 4 sulfur cluster binding [GO:0051539]; coproporphyrinogen oxidase activity [GO:0004109]"]
[null,"Vradi05g05730",10921702,10937894,"kelch domain-containing protein 4","-","-","-"]
[null,"Vradi05g05740",10947535,10956090,"adenine/guanine permease AZG2","-","integral component of membrane [GO:0016021]","purine nucleobase transmembrane transporter activity [GO:0005345]"]
[null,"Vradi05g05750",10961474,10964811,"B3 domain-containing protein Os01g0905400 isoform X1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi05g05760",10993364,11001695,"-","-","-","-"]
[null,"Vradi05g05770",11014542,11058030,"1,3-beta-glucan synthase (EC 2.4.1.34)","(1->3)-beta-D-glucan biosynthetic process [GO:0006075]; cell wall organization [GO:0071555]; regulation of cell shape [GO:0008360]","1,3-beta-D-glucan synthase complex [GO:0000148]; integral component of membrane [GO:0016021]","1,3-beta-D-glucan synthase activity [GO:0003843]"]
[null,"Vradi05g05780",11076932,11081073,"zinc finger CCCH domain-containing protein 43","-","-","DNA binding [GO:0003677]; metal ion binding [GO:0046872]"]
[null,"Vradi05g05790",11106661,11116366,"lysine-specific demethylase JMJ705","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]"]
[null,"Vradi05g05800",11118632,11122108,"FRIGIDA-like protein","cell differentiation [GO:0030154]; flower development [GO:0009908]","-","-"]
[null,"Vradi05g05810",11143822,11149831,"DNA-(apurinic or apyrimidinic site) endonuclease (EC 3.1.-.-)","DNA repair [GO:0006281]","-","lyase activity [GO:0016829]; metal ion binding [GO:0046872]; nuclease activity [GO:0004518]"]
[null,"Vradi05g05820",11157131,11160922,"CBBY-like protein","-","-","hydrolase activity [GO:0016787]"]
[null,"Vradi05g05830",11161593,11168550,"probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC","-","-","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi05g05840",11209973,11222505,"probable Ufm1-specific protease","-","-","peptidase activity [GO:0008233]"]
[null,"Vradi05g05850",11232254,11236619,"protein STICHEL-like 2","DNA replication [GO:0006260]","DNA polymerase III complex [GO:0009360]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]"]
[null,"Vradi05g05860",11346695,11348829,"Pectate lyase (EC 4.2.2.2)","pectin catabolic process [GO:0045490]","cell wall [GO:0005618]","metal ion binding [GO:0046872]; pectate lyase activity [GO:0030570]"]
[null,"Vradi05g05870",11371100,11374748,"BTB/POZ and TAZ domain-containing protein 1 isoform X2","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi05g05880",11391331,11394668,"Cysteinyl endopeptidase","-","-","cysteine-type peptidase activity [GO:0008234]"]
[null,"Vradi05g05890",11391605,11392325,"Protein-methionine-S-oxide reductase (EC 1.8.4.11)","-","-","peptide-methionine (S)-S-oxide reductase activity [GO:0008113]"]
[null,"Vradi05g05900",11414218,11414689,"-","-","-","-"]
[null,"Vradi05g05910",11456984,11460368,"protein ABHD17B","-","-","-"]
["Chr5:22000000-22500000","Vradi05g12950",22007072,22009688,"-","-","-","-"]
[null,"Vradi05g12960",22013178,22016003,"probable thylakoidal processing peptidase 2, chloroplastic","-","integral component of membrane [GO:0016021]","serine-type endopeptidase activity [GO:0004252]"]
[null,"Vradi05g12970",22024537,22028329,"pollen-specific leucine-rich repeat extensin-like protein 1","-","-","-"]
[null,"Vradi05g12980",22028381,22028770,"uncharacterized protein LOC106762354","-","chloroplast thylakoid membrane [GO:0009535]; cytochrome b6f complex [GO:0009512]; integral component of membrane [GO:0016021]","protein domain specific binding [GO:0019904]"]
[null,"Vradi05g12990",22029487,22033563,"Transmembrane protein 147","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-"]
[null,"Vradi05g13000",22040022,22043718,"probable transcription factor KAN4","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi05g13010",22103574,22108169,"wall-associated receptor kinase-like 14","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi05g13020",22138676,22140476,"uncharacterized protein LOC106761152 isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g13030",22142068,22167346,"Hexosyltransferase (EC 2.4.1.-)","-","-","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi05g13040",22177034,22178823,"E3 ubiquitin-protein ligase RNF185 isoform X3","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi05g13050",22181501,22182334,"elongation of fatty acids protein 3-like","fatty acid biosynthetic process [GO:0006633]","endoplasmic reticulum [GO:0005783]; integral component of membrane [GO:0016021]","transferase activity [GO:0016740]"]
[null,"Vradi05g13060",22184764,22193144,"uncharacterized protein LOC106762281","cell adhesion [GO:0007155]","membrane [GO:0016020]","metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]"]
[null,"Vradi05g13070",22201741,22205581,"uncharacterized protein LOC106760950","base-excision repair [GO:0006284]","-","DNA-3-methyladenine glycosylase activity [GO:0008725]"]
[null,"Vradi05g13080",22206079,22207979,"uncharacterized protein LOC106776642","brassinosteroid mediated signaling pathway [GO:0009742]; transcription, DNA-templated [GO:0006351]","-","DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi05g13090",22240312,22242388,"Calcium uniporter protein","mitochondrial calcium ion homeostasis [GO:0051560]","mitochondrial inner membrane [GO:0005743]","calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]"]
[null,"Vradi05g13100",22252047,22258139,"lysophospholipid acyltransferase LPEAT1 isoform X2","-","integral component of membrane [GO:0016021]","transferase activity, transferring acyl groups [GO:0016746]"]
[null,"Vradi05g13110",22258732,22266151,"J domain-containing protein required for chloroplast accumulation response 1 isoform X2","-","-","-"]
[null,"Vradi05g13120",22273164,22275643,"-","-","-","-"]
[null,"Vradi05g13130",22283032,22292176,"uncharacterized protein LOC106762443 isoform X2","-","-","-"]
[null,"Vradi05g13140",22293422,22298045,"transcriptional regulator ATRX isoform X1","-","-","-"]
[null,"Vradi05g13150",22301662,22302495,"Transcription repressor (Ovate family protein)","negative regulation of transcription, DNA-templated [GO:0045892]","nucleus [GO:0005634]","-"]
[null,"Vradi05g13160",22307849,22309509,"uncharacterized protein LOC106760474","-","-","-"]
[null,"Vradi05g13170",22310744,22311879,"uncharacterized protein LOC106761649 isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g13180",22312709,22321464,"uncharacterized protein LOC106762043","-","-","-"]
[null,"Vradi05g13190",22323708,22333503,"Glucose-6-phosphate isomerase (EC 5.3.1.9)","gluconeogenesis [GO:0006094]; glycolytic process [GO:0006096]","-","glucose-6-phosphate isomerase activity [GO:0004347]"]
[null,"Vradi05g13200",22341158,22345787,"DUF21 domain-containing protein At1g47330","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g13210",22351736,22353492,"uncharacterized protein LOC106761019","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]"]
[null,"Vradi05g13220",22354640,22358782,"uncharacterized protein LOC106760850","-","-","-"]
[null,"Vradi05g13230",22360344,22367018,"5'-nucleotidase domain-containing protein 4 isoform X2","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
[null,"Vradi05g13240",22372525,22373628,"protein RADIALIS-like 3","-","nucleus [GO:0005634]","-"]
[null,"Vradi05g13250",22375985,22379687,"DNA-3-methyladenine glycosylase 1","base-excision repair [GO:0006284]","-","catalytic activity [GO:0003824]"]
[null,"Vradi05g13260",22380628,22382604,"uncharacterized protein LOC106760475","lipid biosynthetic process [GO:0008610]","-","-"]
[null,"Vradi05g13270",22383131,22387873,"protein RADIALIS-like 1","-","nucleus [GO:0005634]","-"]
[null,"Vradi05g13280",22391636,22392629,"CBS domain-containing protein CBSX3, mitochondrial","-","-","-"]
[null,"Vradi05g13290",22393316,22394368,"proteoglycan 4","-","-","-"]
[null,"Vradi05g13300",22399113,22399765,"uncharacterized protein LOC106761680","-","-","-"]
[null,"Vradi05g13310",22406495,22408411,"probable pinoresinol-lariciresinol reductase 3","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi05g13320",22410696,22411380,"uncharacterized protein LOC106761757","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g13330",22412350,22416699,"-","-","-","-"]
[null,"Vradi05g13340",22418491,22422464,"gamma carbonic anhydrase 1, mitochondrial-like isoform X2","-","-","-"]
[null,"Vradi05g13350",22426078,22429294,"uncharacterized protein LOC106761006","-","-","-"]
[null,"Vradi05g13360",22430730,22433927,"Ornithine carbamoyltransferase (EC 2.1.3.3)","-","-","amino acid binding [GO:0016597]; ornithine carbamoyltransferase activity [GO:0004585]"]
[null,"Vradi05g13370",22438549,22441140,"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)","organic substance metabolic process [GO:0071704]","extracellular region [GO:0005576]","mannan endo-1,4-beta-mannosidase activity [GO:0016985]"]
[null,"Vradi05g13380",22441517,22445366,"-","-","-","-"]
[null,"Vradi05g13390",22464183,22467333,"abscisic acid 8'-hydroxylase 3 isoform X1","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi05g13400",22467022,22472888,"Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158)","-","-","ATP binding [GO:0005524]; inositol pentakisphosphate 2-kinase activity [GO:0035299]"]
[null,"Vradi05g13410",22474583,22478656,"phosphatidylinositol/phosphatidylcholine transfer protein SFH8","-","-","-"]
[null,"Vradi05g13420",22485301,22488020,"omega-hydroxypalmitate O-feruloyl transferase","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[null,"Vradi05g13430",22490305,22495698,"AP-4 complex subunit mu","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","clathrin adaptor complex [GO:0030131]","-"]
[null,"Vradi05g13440",22496158,22498914,"Mitogen-activated protein kinase (EC 2.7.11.24)","-","-","ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
["Chr5:28500000-29500000","Vradi05g18620",28520379,28522313,"Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]"]
[null,"Vradi05g18630",28524689,28527167,"metacaspase-6-like","-","-","-"]
[null,"Vradi05g18640",28531103,28545363,"E3 ubiquitin-protein ligase RGLG4 isoform X2","-","-","-"]
[null,"Vradi05g18650",28639200,28645290,"NAC domain-containing protein 86 isoform X1","regulation of transcription, DNA-templated [GO:0006355]","-","DNA binding [GO:0003677]"]
[null,"Vradi05g18660",28649220,28650746,"transcription factor MYB14","-","nucleus [GO:0005634]","-"]
[null,"Vradi05g18670",28668686,28671871,"uncharacterized protein LOC106759941","-","-","-"]
[null,"Vradi05g18680",28706211,28708750,"myb family transcription factor APL isoform X3","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi05g18690",28727837,28731350,"uncharacterized protein LOC106759831","-","-","-"]
[null,"Vradi05g18700",28736985,28758418,"Succinate-semialdehyde dehydrogenase (EC 1.2.1.24)","gamma-aminobutyric acid catabolic process [GO:0009450]","mitochondrion [GO:0005739]","succinate-semialdehyde dehydrogenase (NAD+) activity [GO:0004777]"]
[null,"Vradi05g18710",28763720,28770491,"ALA-interacting subunit","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g18720",28786495,28788768,"pentatricopeptide repeat-containing protein At3g46610-like","-","-","-"]
[null,"Vradi05g18730",28794528,28798000,"Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (EC 1.3.5.1)","tricarboxylic acid cycle [GO:0006099]","mitochondrial inner membrane [GO:0005743]","2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]"]
[null,"Vradi05g18740",28799614,28801937,"ATP synthase mitochondrial F1 complex assembly factor 2","proton-transporting ATP synthase complex assembly [GO:0043461]","mitochondrion [GO:0005739]","-"]
[null,"Vradi05g18750",28817698,28821540,"Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (EC 1.1.1.205)","GMP biosynthetic process [GO:0006177]","cytoplasm [GO:0005737]","IMP dehydrogenase activity [GO:0003938]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]"]
[null,"Vradi05g18760",28833134,28835322,"extensin","-","-","-"]
[null,"Vradi05g18770",28833637,28835322,"-","-","-","-"]
[null,"Vradi05g18780",28843399,28845423,"zinc transporter 1","-","integral component of membrane [GO:0016021]","zinc ion transmembrane transporter activity [GO:0005385]"]
[null,"Vradi05g18790",28857614,28858081,"uncharacterized protein LOC106762228","-","-","-"]
[null,"Vradi05g18800",28876914,28879768,"metal tolerance protein 9","-","integral component of membrane [GO:0016021]","cation transmembrane transporter activity [GO:0008324]"]
[null,"Vradi05g18810",28885441,28896790,"Defective in cullin neddylation protein","-","-","-"]
[null,"Vradi05g18820",28925405,28929006,"-","-","-","-"]
[null,"Vradi05g18830",28944687,28946895,"uncharacterized protein LOC106761508","-","nucleus [GO:0005634]","-"]
[null,"Vradi05g18840",28971747,28979372,"cyclin-T1-3 isoform X2","cell cycle [GO:0007049]; cell division [GO:0051301]; regulation of transcription by RNA polymerase II [GO:0006357]","-","cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]"]
[null,"Vradi05g18850",28987277,28988704,"nuclear transcription factor Y subunit C-2","-","nucleus [GO:0005634]","protein heterodimerization activity [GO:0046982]"]
[null,"Vradi05g18860",28993879,29003914,"uncharacterized protein LOC106761414","-","-","-"]
[null,"Vradi05g18870",29003613,29023408,"uncharacterized protein LOC106761852 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi05g18880",29026793,29029805,"protein unc-45 homolog A isoform X2","-","-","-"]
[null,"Vradi05g18890",29038464,29044313,"aspartic proteinase CDR1-like","-","-","-"]
[null,"Vradi05g18900",29047638,29053378,"Sulfurtransferase","-","-","thiosulfate sulfurtransferase activity [GO:0004792]"]
[null,"Vradi05g18910",29085770,29089868,"Phosphoglycerate kinase (EC 2.7.2.3)","glycolytic process [GO:0006096]","-","ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]"]
[null,"Vradi05g18920",29092219,29096920,"Phosphoglycerate kinase (EC 2.7.2.3)","glycolytic process [GO:0006096]","-","ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]"]
[null,"Vradi05g18930",29100137,29106857,"uncharacterized protein LOC106759688 isoform X4","-","-","nucleic acid binding [GO:0003676]; protein methyltransferase activity [GO:0008276]"]
[null,"Vradi05g18940",29124892,29126820,"uncharacterized protein LOC106761002","-","-","-"]
[null,"Vradi05g18950",29199862,29200122,"VQ motif-containing protein 1","-","-","-"]
[null,"Vradi05g18960",29215204,29222061,"polyadenylate-binding protein-interacting protein 9","-","-","RNA binding [GO:0003723]"]
[null,"Vradi05g18970",29292701,29294539,"9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic","-","-","metal ion binding [GO:0046872]; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [GO:0016702]"]
[null,"Vradi05g18980",29315307,29319700,"ruBisCO large subunit-binding protein subunit beta, chloroplastic","protein refolding [GO:0042026]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]"]
[null,"Vradi05g18990",29325817,29331230,"(S)-2-hydroxy-acid oxidase (EC 1.1.3.15)","oxidative photosynthetic carbon pathway [GO:0009854]","-","FMN binding [GO:0010181]; long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity [GO:0052853]; medium-chain-(S)-2-hydroxy-acid oxidase activity [GO:0052854]; very-long-chain-(S)-2-hydroxy-acid oxidase activity [GO:0052852]"]
[null,"Vradi05g19000",29333544,29337694,"uncharacterized protein LOC106761389 isoform X4","methylation [GO:0032259]","-","O-methyltransferase activity [GO:0008171]"]
[null,"Vradi05g19010",29347190,29357089,"probable sugar phosphate/phosphate translocator At3g14410","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g19020",29364441,29365711,"-","-","-","-"]
[null,"Vradi05g19030",29374134,29381255,"Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)","protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]","-","cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]"]
[null,"Vradi05g19040",29408931,29409785,"nicotianamine synthase","nicotianamine biosynthetic process [GO:0030418]","-","nicotianamine synthase activity [GO:0030410]"]
[null,"Vradi05g19050",29424858,29427192,"mitochondrial inner membrane protease subunit 1 isoform X1","-","membrane [GO:0016020]","serine-type peptidase activity [GO:0008236]"]
[null,"Vradi05g19060",29434673,29438201,"-","-","-","-"]
[null,"Vradi05g19070",29470660,29490093,"11-oxo-beta-amyrin 30-oxidase-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi05g19080",29493765,29496202,"11-oxo-beta-amyrin 30-oxidase","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
["Chr5:30000000-30500000","Vradi05g19330",30002689,30003987,"nitrile-specifier protein 5 isoform X1","-","-","-"]
[null,"Vradi05g19340",30036325,30038304,"Post-GPI attachment to proteins factor 3","GPI anchor biosynthetic process [GO:0006506]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g19350",30056177,30070402,"elongation factor 2","-","chloroplast [GO:0009507]","GTPase activity [GO:0003924]; GTP binding [GO:0005525]; translation elongation factor activity [GO:0003746]"]
[null,"Vradi05g19360",30070645,30077726,"UDP-glycosyltransferase TURAN isoform X1","-","-","mannosyltransferase activity [GO:0000030]"]
[null,"Vradi05g19370",30076773,30079555,"DNA polymerase zeta processivity subunit isoform X2","-","-","-"]
[null,"Vradi05g19380",30093364,30094900,"probable BOI-related E3 ubiquitin-protein ligase 3","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi05g19390",30138388,30142780,"protein Iojap, chloroplastic","-","-","-"]
[null,"Vradi05g19400",30152036,30156745,"uncharacterized protein LOC106759739 isoform X2","-","-","-"]
[null,"Vradi05g19410",30162569,30169110,"serine/arginine-rich splicing factor SR45","-","nucleus [GO:0005634]","RNA binding [GO:0003723]"]
[null,"Vradi05g19420",30175306,30177358,"cysteine-rich and transmembrane domain-containing protein WIH1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi05g19430",30193440,30193787,"uncharacterized protein LOC106761063","-","-","-"]
[null,"Vradi05g19440",30278396,30281105,"transcription factor MYB58","-","nucleus [GO:0005634]","-"]
[null,"Vradi05g19450",30320588,30324512,"transcription termination factor MTEF1, chloroplastic isoform X2","DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]","-","double-stranded DNA binding [GO:0003690]"]
[null,"Vradi05g19460",30331875,30332093,"auxin-responsive protein SAUR71","response to auxin [GO:0009733]","-","-"]
[null,"Vradi05g19470",30354977,30364941,"uncharacterized protein LOC106762064 isoform X2","deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]","-","-"]
[null,"Vradi05g19480",30361875,30364941,"-","-","-","-"]
[null,"Vradi05g19490",30386907,30399436,"uncharacterized protein LOC106762082","deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]","-","-"]
[null,"Vradi05g19500",30413028,30423359,"BTB/POZ domain-containing protein At1g04390 isoform X5","-","-","-"]
[null,"Vradi05g19510",30439322,30441037,"pentatricopeptide repeat-containing protein At1g79080, chloroplastic","-","-","mRNA binding [GO:0003729]"]
[null,"Vradi05g19520",30442276,30445146,"pentatricopeptide repeat-containing protein At5g04780, mitochondrial","-","-","zinc ion binding [GO:0008270]"]
[null,"Vradi05g19530",30447725,30447985,"uncharacterized protein LOC106761813","maintenance of seed dormancy [GO:0010231]; response to heat [GO:0009408]","-","protein folding chaperone [GO:0044183]"]
[null,"Vradi05g19540",30448975,30454288,"Biogenesis of lysosome-related organelles complex 1 subunit 7","intracellular protein transport [GO:0006886]","BLOC-1 complex [GO:0031083]","-"]
[null,"Vradi05g19550",30459272,30460402,"uncharacterized protein DDB_G0271670","-","-","-"]
[null,"Vradi05g19560",30490373,30490824,"-","-","-","-"]
["Chr6:17000000-17500000","Vradi06g08800",17008981,17014142,"-","-","-","-"]
[null,"Vradi06g08810",17093241,17095672,"Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[null,"Vradi06g08820",17112474,17113868,"mitogen-activated protein kinase kinase kinase 18","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi06g08830",17131556,17136610,"-","-","-","-"]
[null,"Vradi06g08840",17151142,17156528,"-","-","-","-"]
[null,"Vradi06g08850",17165845,17167721,"protein CHUP1, chloroplastic isoform X2","-","-","-"]
[null,"Vradi06g08860",17171950,17188910,"6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase","fructose 2,6-bisphosphate metabolic process [GO:0006003]; fructose metabolic process [GO:0006000]","-","6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; starch binding [GO:2001070]"]
[null,"Vradi06g08870",17190323,17191671,"RING-H2 finger protein ATL63","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi06g08880",17240531,17242770,"zinc transporter 6, chloroplastic","-","integral component of membrane [GO:0016021]","zinc ion transmembrane transporter activity [GO:0005385]"]
[null,"Vradi06g08890",17263762,17265193,"probable N-acetyltransferase HLS1-like","-","-","N-acetyltransferase activity [GO:0008080]"]
[null,"Vradi06g08900",17295992,17300801,"BAG family molecular chaperone regulator 4","-","-","chaperone binding [GO:0051087]"]
[null,"Vradi06g08910",17333731,17338606,"ETO1-like protein 2","-","-","-"]
["Chr6:20500000-21000000","Vradi06g09610",20508051,20524379,"leucine-rich repeat-containing protein 40 isoform X1","-","-","-"]
[null,"Vradi06g09620",20552891,20554822,"uncharacterized protein LOC106764293 isoform X1","transcription by RNA polymerase III [GO:0006383]","-","-"]
[null,"Vradi06g09630",20569145,20575579,"PH, RCC1 and FYVE domains-containing protein 1","-","-","-"]
[null,"Vradi06g09640",20576730,20579785,"CBS domain-containing protein CBSX5","-","-","-"]
[null,"Vradi06g09650",20726872,20728774,"stem-specific protein TSJT1","-","cytosol [GO:0005829]; nucleus [GO:0005634]; plasma membrane [GO:0005886]; plasmodesma [GO:0009506]","-"]
[null,"Vradi06g09660",20778901,20782800,"lanC-like protein GCR2","carbohydrate metabolic process [GO:0005975]","-","-"]
[null,"Vradi06g09670",20783152,20785801,"NADPH-protochlorophyllide oxidoreductase (EC 1.3.1.33)","chlorophyll biosynthetic process [GO:0015995]; photosynthesis [GO:0015979]","chloroplast [GO:0009507]","protochlorophyllide reductase activity [GO:0016630]"]
[null,"Vradi06g09680",20791180,20796030,"WD repeat-containing protein 44","-","-","-"]
[null,"Vradi06g09690",20867787,20870495,"uncharacterized protein LOC106763081","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi06g09700",20896420,20903320,"COP1-interacting protein 7","-","-","-"]
[null,"Vradi06g09710",20918392,20919249,"disease resistance-like protein CSA1","signal transduction [GO:0007165]","-","-"]
[null,"Vradi06g09720",20971024,20971778,"-","-","-","-"]
[null,"Vradi06g09730",20996479,20999361,"ABC transporter G family member 9","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]"]
["Chr7:0-500000","Vradi07g00010",34929,37722,"cysteine-rich receptor-like protein kinase 25","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi07g00020",46444,52265,"-","-","-","-"]
[null,"Vradi07g00030",57970,67874,"lysM domain receptor-like kinase 3 isoform X1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi07g00040",111290,121508,"-","-","-","-"]
[null,"Vradi07g00050",195949,199838,"probable strigolactone esterase DAD2","-","-","-"]
[null,"Vradi07g00060",212547,215012,"putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial","-","-","-"]
[null,"Vradi07g00070",216746,223386,"uncharacterized protein LOC106769245 isoform X2","-","-","-"]
[null,"Vradi07g00080",239277,243722,"Molybdopterin synthase catalytic subunit (EC 2.8.1.12) (Molybdenum cofactor synthesis protein 2 large subunit) (Molybdenum cofactor synthesis protein 2B) (MOCS2B)","Mo-molybdopterin cofactor biosynthetic process [GO:0006777]","cytosol [GO:0005829]; molybdopterin synthase complex [GO:0019008]","molybdopterin synthase activity [GO:0030366]"]
[null,"Vradi07g00090",260702,275595,"mitochondrial inner membrane protein OXA1-like","-","integral component of membrane [GO:0016021]","membrane insertase activity [GO:0032977]"]
[null,"Vradi07g00100",278918,279466,"Werner Syndrome-like exonuclease","-","-","3'-5' exonuclease activity [GO:0008408]; nucleic acid binding [GO:0003676]"]
[null,"Vradi07g00110",336101,336691,"AT-hook motif nuclear-localized protein 17-like","-","-","minor groove of adenine-thymine-rich DNA binding [GO:0003680]"]
[null,"Vradi07g00120",370783,375802,"Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)","-","-","hydroxymethylglutaryl-CoA lyase activity [GO:0004419]"]
[null,"Vradi07g00130",474548,479364,"F-box protein At2g26850 isoform X1","-","-","-"]
["Chr7:1000000-1500000","Vradi07g00360",1009732,1015503,"G-box-binding factor 1","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi07g00370",1022586,1030997,"uncharacterized protein LOC106770161","-","-","-"]
[null,"Vradi07g00380",1045505,1046503,"scarecrow-like protein 15","-","nucleus [GO:0005634]","-"]
[null,"Vradi07g00390",1057712,1066930,"Protein phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[null,"Vradi07g00400",1074746,1077458,"protein indeterminate-domain 2","-","-","-"]
[null,"Vradi07g00410",1096439,1098110,"polyol transporter 5","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi07g00420",1098772,1102058,"uncharacterized protein LOC106769340","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g00430",1115318,1118551,"acidic leucine-rich nuclear phosphoprotein 32-related protein isoform X1","-","-","-"]
[null,"Vradi07g00440",1124803,1127351,"proline-rich receptor-like protein kinase PERK4","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi07g00450",1129848,1133412,"sulfite exporter TauE/SafE family protein 3-like isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g00460",1170608,1173949,"cytochrome P450 90B1 isoform X2","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi07g00470",1178480,1187329,"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1)","electron transport chain [GO:0022900]; tricarboxylic acid cycle [GO:0006099]","mitochondrial inner membrane [GO:0005743]","flavin adenine dinucleotide binding [GO:0050660]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]"]
[null,"Vradi07g00480",1191190,1191622,"-","-","-","-"]
[null,"Vradi07g00490",1212686,1216956,"random slug protein 5","-","-","-"]
[null,"Vradi07g00500",1219565,1220347,"EEF1A lysine methyltransferase 3","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]"]
[null,"Vradi07g00510",1221294,1227598,"AP complex subunit sigma","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","membrane coat [GO:0030117]","-"]
[null,"Vradi07g00520",1227658,1237274,"pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi07g00530",1239248,1239487,"-","-","-","-"]
[null,"Vradi07g00540",1245364,1248741,"maf-like protein DDB_G0281937 isoform X1","-","-","nucleoside-triphosphate diphosphatase activity [GO:0047429]"]
[null,"Vradi07g00550",1257250,1259040,"GATA transcription factor 18","flower development [GO:0009908]","-","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]; zinc ion binding [GO:0008270]"]
[null,"Vradi07g00560",1266208,1268957,"epoxide hydrolase 1-like","-","-","hydrolase activity [GO:0016787]"]
[null,"Vradi07g00570",1269919,1275610,"sugar transporter ERD6-like 6","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi07g00580",1298824,1304491,"-","-","-","-"]
[null,"Vradi07g00590",1338306,1339232,"zinc-finger homeodomain protein 6","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi07g00600",1349360,1349760,"uncharacterized protein LOC111242124","-","-","-"]
[null,"Vradi07g00610",1356479,1356688,"-","-","-","-"]
[null,"Vradi07g00620",1373457,1373678,"-","-","-","-"]
[null,"Vradi07g00630",1390611,1396280,"RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","ubiquitin-protein transferase activity [GO:0004842]"]
[null,"Vradi07g00640",1402736,1404867,"Anaphase-promoting complex subunit 10","anaphase-promoting complex-dependent catabolic process [GO:0031145]; cell cycle [GO:0007049]; cell division [GO:0051301]; negative regulation of DNA endoreduplication [GO:0032876]; phloem or xylem histogenesis [GO:0010087]","anaphase-promoting complex [GO:0005680]; nuclear body [GO:0016604]","-"]
[null,"Vradi07g00650",1411343,1417056,"Tubby-like F-box protein","-","-","-"]
[null,"Vradi07g00660",1425401,1429010,"pheophytinase, chloroplastic isoform X1","-","-","-"]
[null,"Vradi07g00670",1449607,1456026,"auxilin-like protein 1","-","-","-"]
[null,"Vradi07g00680",1468126,1470753,"putative pentatricopeptide repeat-containing protein At5g08490 isoform X2","-","-","-"]
[null,"Vradi07g00690",1496175,1499836,"uncharacterized protein LOC106765641","-","integral component of membrane [GO:0016021]","-"]
["Chr7:10500000-11000000","Vradi07g05200",10568864,10570471,"F-box/kelch-repeat protein At1g26930","-","-","-"]
[null,"Vradi07g05210",10699269,10711494,"uncharacterized protein LOC106753071","-","-","-"]
[null,"Vradi07g05220",10803002,10803313,"-","-","-","-"]
[null,"Vradi07g05230",10845459,10855104,"ABC transporter B family member 4-like","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]"]
[null,"Vradi07g05240",10894994,10900679,"FHA domain-containing protein DDL","-","-","-"]
[null,"Vradi07g05250",10899448,10900714,"-","-","-","-"]
[null,"Vradi07g05260",10955546,10968183,"uncharacterized protein LOC106768719 isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g05270",10978896,10983176,"protein trichome birefringence-like 43","-","-","-"]
["Chr7:15500000-16000000","Vradi07g06860",15516930,15521636,"transcription factor Pur-alpha 1","-","nucleus [GO:0005634]","purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]"]
[null,"Vradi07g06870",15550307,15574579,"uncharacterized protein LOC106767324","-","-","-"]
[null,"Vradi07g06880",15554328,15559516,"uncharacterized protein LOC106763507","-","-","protein dimerization activity [GO:0046983]"]
[null,"Vradi07g06890",15578028,15591271,"uncharacterized protein LOC106765854","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g06900",15593383,15596270,"Pyruvate kinase (EC 2.7.1.40)","-","-","ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]"]
[null,"Vradi07g06910",15596772,15605387,"-","-","-","-"]
[null,"Vradi07g06920",15631345,15632005,"-","-","-","-"]
[null,"Vradi07g06930",15707661,15716214,"two-component response regulator ARR17 isoform X1","phosphorelay signal transduction system [GO:0000160]","-","kinase activity [GO:0016301]"]
[null,"Vradi07g06940",15793138,15793666,"-","-","-","-"]
[null,"Vradi07g06950",15830863,15835657,"uncharacterized protein LOC106769042","-","-","-"]
[null,"Vradi07g06960",15861637,15866450,"metalloendoproteinase 1-like","-","extracellular matrix [GO:0031012]","metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]"]
[null,"Vradi07g06970",15875688,15877434,"-","-","-","-"]
[null,"Vradi07g06980",15924109,15926575,"Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]"]
[null,"Vradi07g06990",15948198,15950941,"IAA-amino acid hydrolase ILR1-like 4","-","-","hydrolase activity [GO:0016787]"]
["Chr7:16500000-17000000","Vradi07g07240",16514988,16517995,"uncharacterized protein At3g27210 isoform X2","-","-","-"]
[null,"Vradi07g07250",16552741,16553166,"putative calcium-binding protein CML19","-","-","calcium ion binding [GO:0005509]"]
[null,"Vradi07g07260",16559836,16565787,"uncharacterized protein LOC106765695 isoform X2","-","nuclear pore [GO:0005643]","-"]
[null,"Vradi07g07270",16579712,16593993,"probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi07g07280",16611019,16631288,"4-coumarate--CoA ligase-like 9","-","-","ligase activity [GO:0016874]"]
[null,"Vradi07g07290",16667749,16680582,"4-coumarate--CoA ligase-like 9","-","integral component of membrane [GO:0016021]","ligase activity [GO:0016874]"]
[null,"Vradi07g07300",16692909,16694334,"basic endochitinase-like","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]"]
[null,"Vradi07g07310",16747581,16753742,"fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]"]
[null,"Vradi07g07320",16766112,16771218,"cytochrome c1-2, heme protein, mitochondrial","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]"]
[null,"Vradi07g07330",16795800,16797317,"uncharacterized protein LOC106766130","-","-","-"]
[null,"Vradi07g07340",16795938,16798064,"-","-","-","-"]
[null,"Vradi07g07350",16814651,16815212,"-","-","-","-"]
[null,"Vradi07g07360",16829678,16830232,"-","-","-","-"]
[null,"Vradi07g07370",16843574,16846396,"TLC domain-containing protein At5g14285","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g07380",16855455,16857458,"uncharacterized protein LOC111241085","-","-","-"]
[null,"Vradi07g07390",16886851,16893067,"lysine histidine transporter 1","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]"]
[null,"Vradi07g07400",16907506,16911221,"ankyrin repeat domain-containing protein 50","-","-","-"]
[null,"Vradi07g07410",16922686,16924241,"54S ribosomal protein L37, mitochondrial","-","mitochondrion [GO:0005739]; ribosome [GO:0005840]","-"]
[null,"Vradi07g07420",16927512,16931179,"F-box protein SKIP14","-","-","-"]
[null,"Vradi07g07430",16944262,16956358,"Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)","glucose metabolic process [GO:0006006]; pentose-phosphate shunt [GO:0006098]","-","glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]"]
[null,"Vradi07g07440",16985778,16986104,"-","-","-","-"]
[null,"Vradi07g07450",16993268,17002621,"AUGMIN subunit 6","spindle assembly [GO:0051225]","HAUS complex [GO:0070652]","-"]
["Chr7:39000000-39500000","Vradi07g17640",39008775,39017725,"RHOMBOID-like protein 12, mitochondrial","-","integral component of membrane [GO:0016021]","serine-type endopeptidase activity [GO:0004252]"]
[null,"Vradi07g17650",39019012,39026954,"ABC transporter B family member 25","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]"]
[null,"Vradi07g17660",39042381,39044310,"cytochrome P450 78A5-like","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi07g17670",39052981,39056163,"COBRA-like protein","cellulose microfibril organization [GO:0010215]","anchored component of membrane [GO:0031225]; integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g17680",39057190,39062183,"squamosa promoter-binding-like protein 6","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; metal ion binding [GO:0046872]"]
[null,"Vradi07g17690",39087622,39102627,"MADS-box protein EJ2-like","positive regulation of transcription by RNA polymerase II [GO:0045944]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]"]
[null,"Vradi07g17700",39108343,39109093,"uncharacterized protein LOC106767914","-","-","-"]
[null,"Vradi07g17710",39117135,39119281,"Hexosyltransferase (EC 2.4.1.-)","cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]"]
[null,"Vradi07g17720",39122708,39124597,"-","-","-","-"]
[null,"Vradi07g17730",39126676,39127354,"-","-","-","-"]
[null,"Vradi07g17740",39128697,39132925,"protein MICROTUBULE BINDING PROTEIN 2C","plasmodesmata-mediated intercellular transport [GO:0010497]","-","microtubule binding [GO:0008017]"]
[null,"Vradi07g17750",39138323,39139829,"dof zinc finger protein DOF5.4-like","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi07g17760",39152634,39153515,"uncharacterized protein LOC106768410","-","-","-"]
[null,"Vradi07g17770",39160546,39164733,"-","-","-","-"]
[null,"Vradi07g17780",39171310,39177891,"transcription factor BIM1 isoform X2","transcription, DNA-templated [GO:0006351]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; protein dimerization activity [GO:0046983]"]
[null,"Vradi07g17790",39186036,39194845,"uncharacterized protein LOC106768927","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi07g17800",39213774,39214784,"E3 ubiquitin-protein ligase CIP8","-","-","-"]
[null,"Vradi07g17810",39217687,39218178,"basic leucine zipper 43 isoform X2","-","-","DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi07g17820",39220534,39229437,"serine protease SPPA, chloroplastic isoform X1","-","-","peptidase activity [GO:0008233]"]
[null,"Vradi07g17830",39256565,39256870,"-","-","-","-"]
[null,"Vradi07g17840",39263935,39271461,"serine/threonine-protein kinase 16 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi07g17850",39285684,39294180,"uridine-cytidine kinase C isoform X2","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; kinase activity [GO:0016301]"]
[null,"Vradi07g17860",39299782,39308492,"Phenylalanyl-tRNA synthetase beta subunit (EC 6.1.1.20)","phenylalanyl-tRNA aminoacylation [GO:0006432]","cytoplasm [GO:0005737]","ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]"]
[null,"Vradi07g17870",39338307,39339346,"tetraspanin-11","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g17880",39340737,39344409,"protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g17890",39345563,39347875,"calcium sensing receptor, chloroplastic","-","-","-"]
[null,"Vradi07g17900",39354672,39355301,"ethylene-responsive transcription factor CRF1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi07g17910",39366986,39367366,"uncharacterized protein LOC106768034","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g17920",39368578,39369060,"probable calcium-binding protein CML15","-","-","calcium ion binding [GO:0005509]"]
[null,"Vradi07g17930",39371167,39377398,"Phospholipid-transporting ATPase (EC 7.6.2.1)","phospholipid transport [GO:0015914]","integral component of membrane [GO:0016021]","ATPase-coupled intramembrane lipid transporter activity [GO:0140326]; ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]"]
[null,"Vradi07g17940",39392426,39403969,"G patch domain-containing protein TGH isoform X2","RNA processing [GO:0006396]","-","RNA binding [GO:0003723]"]
[null,"Vradi07g17950",39428828,39432016,"protein Dr1 homolog isoform X2","-","nucleus [GO:0005634]","protein heterodimerization activity [GO:0046982]"]
[null,"Vradi07g17960",39432680,39434052,"protein MIZU-KUSSEI 1","hydrotropism [GO:0010274]","-","-"]
[null,"Vradi07g17970",39438768,39442617,"Kinesin-like protein","microtubule-based movement [GO:0007018]","microtubule [GO:0005874]","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]"]
[null,"Vradi07g17980",39449755,39454568,"DEAD-box ATP-dependent RNA helicase 17 isoform X2","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; RNA binding [GO:0003723]"]
[null,"Vradi07g17990",39458590,39459317,"mavicyanin-like","-","-","electron transfer activity [GO:0009055]"]
[null,"Vradi07g18000",39459985,39461595,"piriformospora indica-insensitive protein 2-like isoform X1","-","-","-"]
[null,"Vradi07g18010",39467942,39475579,"uncharacterized protein LOC106768499","-","nucleus [GO:0005634]","zinc ion binding [GO:0008270]"]
[null,"Vradi07g18020",39474090,39475433,"Peptidylprolyl isomerase (EC 5.2.1.8)","-","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]"]
[null,"Vradi07g18030",39490244,39492257,"single-stranded DNA-binding protein, mitochondrial","DNA replication [GO:0006260]","-","single-stranded DNA binding [GO:0003697]"]
[null,"Vradi07g18040",39494562,39495468,"-","-","-","-"]
["Chr7:47000000-47500000","Vradi07g23840",47005821,47006324,"E3 ubiquitin-protein ligase RHA1B","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g23850",47008321,47017736,"vacuolar protein sorting-associated protein 27","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi07g23860",47032988,47035528,"LOW QUALITY PROTEIN: protein TIFY 3","-","-","-"]
[null,"Vradi07g23870",47039202,47040833,"protein CREG1","-","extracellular region [GO:0005576]","-"]
[null,"Vradi07g23880",47046221,47049281,"protein FATTY ACID EXPORT 2, chloroplastic","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g23890",47084194,47086106,"rhomboid-like protein 14, mitochondrial isoform X2","-","integral component of membrane [GO:0016021]","serine-type endopeptidase activity [GO:0004252]"]
[null,"Vradi07g23900",47087585,47091655,"cyprosin","lipid metabolic process [GO:0006629]","-","aspartic-type endopeptidase activity [GO:0004190]"]
[null,"Vradi07g23910",47092943,47100426,"GPI ethanolamine phosphate transferase 3","GPI anchor biosynthetic process [GO:0006506]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","mannose-ethanolamine phosphotransferase activity [GO:0051377]"]
[null,"Vradi07g23920",47104217,47106600,"protein NRT1/ PTR FAMILY 4.5","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi07g23930",47111145,47116176,"Pectin acetylesterase (EC 3.1.1.-)","cell wall organization [GO:0071555]","cell wall [GO:0005618]; extracellular region [GO:0005576]","hydrolase activity [GO:0016787]"]
[null,"Vradi07g23940",47129958,47130765,"Auxin-induced protein","auxin-activated signaling pathway [GO:0009734]; regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","-"]
[null,"Vradi07g23950",47134117,47137708,"chromatin structure-remodeling complex protein BSH","chromatin remodeling [GO:0006338]","nuclear chromosome [GO:0000228]","-"]
[null,"Vradi07g23960",47161142,47163305,"uncharacterized protein LOC106767596","-","-","hydrolase activity [GO:0016787]; zinc ion binding [GO:0008270]"]
[null,"Vradi07g23970",47172847,47175859,"uncharacterized protein LOC106766518","-","-","-"]
[null,"Vradi07g23980",47198018,47198741,"glutathione S-transferase U25","glutathione metabolic process [GO:0006749]","-","transferase activity [GO:0016740]"]
[null,"Vradi07g23990",47200194,47201329,"-","-","-","-"]
[null,"Vradi07g24000",47206797,47207381,"uncharacterized protein LOC106769038","-","-","-"]
[null,"Vradi07g24010",47212651,47223565,"SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1","-","-","-"]
[null,"Vradi07g24020",47224978,47227573,"diacylglycerol O-acyltransferase 3, cytosolic","-","-","transferase activity, transferring acyl groups [GO:0016746]"]
[null,"Vradi07g24030",47229121,47233983,"protein CHUP1, chloroplastic isoform X2","-","-","-"]
[null,"Vradi07g24040",47303210,47310774,"5'-nucleotidase domain-containing protein 4","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
[null,"Vradi07g24050",47312131,47314475,"tRNA pseudouridine synthase (EC 5.4.99.12)","pseudouridine synthesis [GO:0001522]; tRNA processing [GO:0008033]","-","RNA binding [GO:0003723]; tRNA pseudouridine synthase activity [GO:0106029]"]
[null,"Vradi07g24060",47322194,47325802,"uncharacterized protein LOC106769211 isoform X1","-","-","zinc ion binding [GO:0008270]"]
[null,"Vradi07g24070",47328507,47329966,"LOW QUALITY PROTEIN: embryonic protein DC-8","-","-","-"]
[null,"Vradi07g24080",47334977,47338962,"Non-specific serine/threonine protein kinase (EC 2.7.11.1)","signal transduction [GO:0007165]","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[null,"Vradi07g24090",47341039,47344350,"GTP diphosphokinase (EC 2.7.6.5)","guanosine tetraphosphate metabolic process [GO:0015969]","-","ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]; GTP diphosphokinase activity [GO:0008728]; kinase activity [GO:0016301]"]
[null,"Vradi07g24100",47347346,47349356,"-","-","-","-"]
[null,"Vradi07g24110",47349605,47351131,"Protein-serine/threonine kinase (EC 2.7.11.-)","-","mitochondrial matrix [GO:0005759]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi07g24120",47354821,47359568,"novel plant SNARE 13","protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]"]
[null,"Vradi07g24130",47360097,47364953,"probable sugar phosphate/phosphate translocator At3g17430","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g24140",47373412,47377932,"-","-","-","-"]
[null,"Vradi07g24150",47379750,47380217,"uncharacterized protein LOC106766732","-","-","-"]
[null,"Vradi07g24160",47381257,47385774,"pto-interacting protein 1 isoform X2","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi07g24170",47395707,47401921,"squamosa promoter-binding-like protein 1","-","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","DNA binding [GO:0003677]; metal ion binding [GO:0046872]"]
[null,"Vradi07g24180",47403349,47405987,"pentatricopeptide repeat-containing protein At3g06430, chloroplastic","-","-","-"]
[null,"Vradi07g24190",47420392,47421427,"-","-","-","-"]
[null,"Vradi07g24200",47442533,47444212,"Glycine cleavage system H protein","glycine decarboxylation via glycine cleavage system [GO:0019464]","glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]","-"]
[null,"Vradi07g24210",47464114,47466357,"MATH domain and coiled-coil domain-containing protein At3g58400 isoform X1","-","-","-"]
[null,"Vradi07g24220",47469860,47476826,"calmodulin-binding transcription activator 1 isoform X2","-","nucleus [GO:0005634]","calmodulin binding [GO:0005516]; DNA binding [GO:0003677]"]
[null,"Vradi07g24230",47478682,47490830,"kinesin-like protein KIN-12C","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]"]
[null,"Vradi07g24240",47497389,47506893,"importin beta-like SAD2","intracellular protein transport [GO:0006886]","-","small GTPase binding [GO:0031267]"]
["Chr7:54000000-54500000","Vradi07g30180",54039103,54045970,"tubulin-folding cofactor B","-","-","-"]
[null,"Vradi07g30190",54050988,54051787,"-","-","-","-"]
[null,"Vradi07g30200",54055261,54059476,"SUMO-activating enzyme subunit 1A isoform X2","-","-","ubiquitin-like modifier activating enzyme activity [GO:0008641]"]
[null,"Vradi07g30210",54072061,54075348,"squamosa promoter-binding-like protein 13A","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; metal ion binding [GO:0046872]"]
[null,"Vradi07g30220",54077380,54080830,"gamma carbonic anhydrase-like 2, mitochondrial","-","-","-"]
[null,"Vradi07g30230",54085500,54094408,"CBS domain-containing protein CBSCBSPB1 isoform X3","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g30240",54103919,54104596,"protein P21","-","-","-"]
[null,"Vradi07g30250",54106110,54109222,"UDP-glucose 4-epimerase GEPI42-like","-","-","-"]
[null,"Vradi07g30260",54115317,54117600,"elicitor-responsive protein 3 isoform X1","-","-","-"]
[null,"Vradi07g30270",54119340,54126400,"uncharacterized protein LOC106768326 isoform X1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi07g30280",54129244,54132346,"Transcription initiation factor IIE subunit beta","transcription initiation from RNA polymerase II promoter [GO:0006367]","transcription factor TFIIE complex [GO:0005673]","DNA binding [GO:0003677]"]
[null,"Vradi07g30290",54133113,54136554,"uncharacterized protein LOC106769407","-","-","-"]
[null,"Vradi07g30300",54137563,54137775,"-","-","-","-"]
[null,"Vradi07g30310",54140871,54144894,"putative DEAD-box ATP-dependent RNA helicase 33","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[null,"Vradi07g30320",54145670,54149437,"tetraspanin-10 isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g30330",54150680,54156558,"uncharacterized protein LOC106769190 isoform X1","-","-","nucleic acid binding [GO:0003676]"]
[null,"Vradi07g30340",54157564,54158669,"-","-","-","-"]
[null,"Vradi07g30350",54159425,54159847,"-","-","-","-"]
[null,"Vradi07g30360",54173606,54173806,"-","-","-","-"]
[null,"Vradi07g30370",54185255,54190646,"intracellular protein transport protein USO1","-","-","-"]
[null,"Vradi07g30380",54188025,54190348,"-","-","-","-"]
[null,"Vradi07g30390",54204657,54206649,"-","-","-","-"]
[null,"Vradi07g30400",54217477,54220515,"-","-","-","-"]
[null,"Vradi07g30410",54233932,54237784,"protein LURP-one-related 4","-","-","-"]
[null,"Vradi07g30420",54244950,54248466,"probable LRR receptor-like serine/threonine-protein kinase At1g63430","-","-","kinase activity [GO:0016301]"]
[null,"Vradi07g30430",54249878,54252897,"uncharacterized protein LOC106769442","-","-","metal ion binding [GO:0046872]; nuclease activity [GO:0004518]"]
[null,"Vradi07g30440",54254129,54258063,"-","-","-","-"]
[null,"Vradi07g30450",54258339,54264660,"-","-","-","-"]
[null,"Vradi07g30460",54267419,54268008,"actin-depolymerizing factor 12","actin filament depolymerization [GO:0030042]","actin cytoskeleton [GO:0015629]","actin binding [GO:0003779]"]
[null,"Vradi07g30470",54269670,54272457,"serine racemase isoform X1","cellular amino acid metabolic process [GO:0006520]","-","pyridoxal phosphate binding [GO:0030170]"]
[null,"Vradi07g30480",54280016,54288685,"probable copper-transporting ATPase HMA5","-","integral component of membrane [GO:0016021]","ATPase-coupled cation transmembrane transporter activity [GO:0019829]; ATP binding [GO:0005524]; copper ion binding [GO:0005507]"]
[null,"Vradi07g30490",54288935,54294942,"glutathione S-transferase T1","glutathione metabolic process [GO:0006749]","cytoplasm [GO:0005737]","glutathione transferase activity [GO:0004364]"]
[null,"Vradi07g30500",54295264,54300302,"Glutathione peroxidase","response to oxidative stress [GO:0006979]","-","glutathione peroxidase activity [GO:0004602]"]
[null,"Vradi07g30510",54301478,54306050,"AT-hook motif nuclear-localized protein","-","nucleus [GO:0005634]","minor groove of adenine-thymine-rich DNA binding [GO:0003680]"]
[null,"Vradi07g30520",54309378,54320684,"probable serine/threonine-protein kinase At5g41260 isoform X1","-","plasma membrane [GO:0005886]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi07g30530",54320954,54323777,"Tubulin beta chain","microtubule-based process [GO:0007017]","microtubule [GO:0005874]","GTPase activity [GO:0003924]; GTP binding [GO:0005525]; structural constituent of cytoskeleton [GO:0005200]"]
[null,"Vradi07g30540",54325348,54333127,"Glutamate--cysteine ligase (EC 6.3.2.2)","glutathione biosynthetic process [GO:0006750]","chloroplast [GO:0009507]","ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]"]
[null,"Vradi07g30550",54339425,54340561,"5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic","-","-","hydrolase activity [GO:0016787]"]
[null,"Vradi07g30560",54345678,54352869,"ABC transporter F family member 4","chromatin organization [GO:0006325]; transcription, DNA-templated [GO:0006351]","-","chromatin binding [GO:0003682]"]
[null,"Vradi07g30570",54357532,54361387,"uncharacterized protein LOC106765741","-","-","-"]
[null,"Vradi07g30580",54362899,54367170,"uncharacterized protein LOC106768214","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g30590",54368416,54376113,"kinesin-like protein KIN-14J isoform X2","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]"]
[null,"Vradi07g30600",54381251,54383404,"uncharacterized protein LOC106767062","-","-","-"]
[null,"Vradi07g30610",54392131,54395959,"transcription factor EGL1","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]"]
[null,"Vradi07g30620",54411547,54414621,"Glutamine amidotransferase (EC 6.3.5.2)","glutamine metabolic process [GO:0006541]","-","ATP binding [GO:0005524]; GMP synthase (glutamine-hydrolyzing) activity [GO:0003922]; pyrophosphatase activity [GO:0016462]"]
[null,"Vradi07g30630",54416731,54421154,"uncharacterized protein LOC106768413 isoform X1","-","-","-"]
[null,"Vradi07g30640",54421265,54425313,"uncharacterized protein LOC106768412","biosynthetic process [GO:0009058]; cell division [GO:0051301]; regulation of cell shape [GO:0008360]","cytoplasm [GO:0005737]","acid-amino acid ligase activity [GO:0016881]; ATP binding [GO:0005524]"]
[null,"Vradi07g30650",54431742,54433179,"probable aquaporin PIP1-2","-","integral component of membrane [GO:0016021]","channel activity [GO:0015267]"]
[null,"Vradi07g30660",54434836,54437918,"short-chain dehydrogenase TIC 32, chloroplastic-like isoform X4","-","-","-"]
[null,"Vradi07g30670",54438849,54447281,"mitogen-activated protein kinase kinase kinase YODA","inflorescence development [GO:0010229]; stomatal complex morphogenesis [GO:0010103]; suspensor development [GO:0010098]","cell cortex [GO:0005938]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi07g30680",54480651,54482794,"BTB/POZ domain-containing protein At5g41330","protein homooligomerization [GO:0051260]","-","-"]
[null,"Vradi07g30690",54488519,54491052,"uncharacterized protein LOC106768529","-","-","-"]
[null,"Vradi07g30700",54497421,54510036,"uncharacterized protein LOC106761104 isoform X1","-","-","-"]
["Chr8:6000000-6500000","Vradi08g03530",6008688,6010266,"protein trichome birefringence-like 36","-","-","-"]
[null,"Vradi08g03540",6020477,6027826,"urease accessory protein D isoform X2","nitrogen compound metabolic process [GO:0006807]","-","nickel cation binding [GO:0016151]"]
[null,"Vradi08g03550",6062084,6064131,"L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase","-","-","holo-[acyl-carrier-protein] synthase activity [GO:0008897]; magnesium ion binding [GO:0000287]"]
[null,"Vradi08g03560",6074354,6075350,"-","-","-","-"]
[null,"Vradi08g03570",6078554,6088421,"amino acid transporter AVT1C","amino acid transport [GO:0006865]; auxin-activated signaling pathway [GO:0009734]","integral component of membrane [GO:0016021]","symporter activity [GO:0015293]"]
[null,"Vradi08g03580",6089194,6089749,"protein RADIALIS-like 1","-","nucleus [GO:0005634]","-"]
[null,"Vradi08g03590",6101031,6104608,"-","-","-","-"]
[null,"Vradi08g03600",6119723,6123644,"Carboxypeptidase (EC 3.4.16.-)","-","extracellular region [GO:0005576]","serine-type carboxypeptidase activity [GO:0004185]"]
[null,"Vradi08g03610",6126933,6132703,"putative lipase ROG1","-","-","-"]
[null,"Vradi08g03620",6150419,6151015,"ethylene-responsive transcription factor 5-like","-","-","DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi08g03630",6158515,6158972,"-","-","-","-"]
[null,"Vradi08g03640",6179166,6183031,"ethylene-responsive transcription factor ERF105","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi08g03650",6190899,6215690,"polycomb group protein EMBRYONIC FLOWER 2-like","-","-","-"]
[null,"Vradi08g03660",6239307,6252475,"uncharacterized protein LOC106768006","-","-","-"]
[null,"Vradi08g03670",6264288,6265345,"uncharacterized protein LOC106771699","-","-","nucleic acid binding [GO:0003676]; RNA-DNA hybrid ribonuclease activity [GO:0004523]"]
[null,"Vradi08g03680",6286739,6289064,"histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like","methylation [GO:0032259]","nucleus [GO:0005634]","methyltransferase activity [GO:0008168]"]
[null,"Vradi08g03690",6330675,6337928,"cell division cycle 20.2, cofactor of APC complex","cell division [GO:0051301]; positive regulation of ubiquitin protein ligase activity [GO:1904668]; protein ubiquitination [GO:0016567]","-","anaphase-promoting complex binding [GO:0010997]; ubiquitin-protein transferase activator activity [GO:0097027]"]
[null,"Vradi08g03700",6339722,6343821,"Superoxide dismutase (EC 1.15.1.1)","-","-","metal ion binding [GO:0046872]; superoxide dismutase activity [GO:0004784]"]
[null,"Vradi08g03710",6344857,6347414,"4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96)","response to abscisic acid [GO:0009737]; response to salt stress [GO:0009651]; ribulose bisphosphate carboxylase complex assembly [GO:0110102]; tetrahydrobiopterin biosynthetic process [GO:0006729]","cell periphery [GO:0071944]; chloroplast stroma [GO:0009570]; nucleus [GO:0005634]","4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]"]
[null,"Vradi08g03720",6352411,6354504,"uncharacterized protein LOC106772338","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g03730",6362486,6367819,"uncharacterized protein LOC106772117 isoform X2","-","-","-"]
[null,"Vradi08g03740",6390033,6393606,"AP2-like ethylene-responsive transcription factor TOE3","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi08g03750",6404925,6405209,"-","-","-","-"]
[null,"Vradi08g03760",6409237,6421135,"uncharacterized protein LOC106772741","-","-","-"]
[null,"Vradi08g03770",6427259,6433992,"-","-","-","-"]
[null,"Vradi08g03780",6436011,6436685,"probable acetyltransferase NATA1-like","-","-","N-acetyltransferase activity [GO:0008080]"]
["Chr8:15500000-16000000","Vradi08g06530",15593785,15595875,"Peptidylprolyl isomerase (EC 5.2.1.8)","-","-","peptidyl-prolyl cis-trans isomerase activity [GO:0003755]"]
[null,"Vradi08g06540",15640307,15642047,"Fructose-bisphosphate aldolase (EC 4.1.2.13)","glycolytic process [GO:0006096]","-","fructose-bisphosphate aldolase activity [GO:0004332]"]
[null,"Vradi08g06550",15688358,15691140,"trihelix transcription factor PTL","-","nucleus [GO:0005634]","-"]
[null,"Vradi08g06560",15823756,15824271,"-","-","-","-"]
[null,"Vradi08g06570",15917203,15917564,"-","-","-","-"]
[null,"Vradi08g06580",15918416,15920273,"-","-","-","-"]
[null,"Vradi08g06590",15955334,15956076,"CASP-like protein","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-"]
[null,"Vradi08g06600",15972326,15983539,"protein fluG-like","-","-","hydrolase activity [GO:0016787]"]
["Chr8:18500000-19000000","Vradi08g07190",18547329,18549009,"thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like","-","-","-"]
[null,"Vradi08g07200",18806952,18808298,"F-box/kelch-repeat protein At1g22040","-","-","-"]
[null,"Vradi08g07210",18821087,18821878,"-","-","-","-"]
[null,"Vradi08g07220",18899678,18899914,"-","-","-","-"]
["Chr8:20000000-21000000","Vradi08g07440",20007550,20015463,"ABC transporter C family member 14","-","integral component of membrane [GO:0016021]","ATPase activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]"]
[null,"Vradi08g07450",20029507,20036918,"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial isoform X2","-","-","catalytic activity [GO:0003824]"]
[null,"Vradi08g07460",20050210,20051748,"xyloglucan galactosyltransferase MUR3","protein glycosylation [GO:0006486]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi08g07470",20054779,20055144,"Photosystem II reaction center Psb28 protein","photosynthesis [GO:0015979]","photosystem II oxygen evolving complex [GO:0009654]","-"]
[null,"Vradi08g07480",20068918,20071845,"putative receptor-like protein kinase At4g00960","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi08g07490",20115592,20118865,"MDIS1-interacting receptor like kinase 1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi08g07500",20119407,20123093,"Auxin-induced protein","auxin-activated signaling pathway [GO:0009734]; regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","-"]
[null,"Vradi08g07510",20172873,20173169,"mitochondrial import receptor subunit TOM9-2","intracellular protein transport [GO:0006886]","integral component of membrane [GO:0016021]; mitochondrial outer membrane [GO:0005741]","-"]
[null,"Vradi08g07520",20179210,20180529,"cysteine-rich repeat secretory protein 11","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g07530",20183093,20190939,"probable inactive histone-lysine N-methyltransferase SUVR2 isoform X2","-","nucleus [GO:0005634]","histone-lysine N-methyltransferase activity [GO:0018024]; zinc ion binding [GO:0008270]"]
[null,"Vradi08g07540",20192643,20194832,"uncharacterized protein LOC106769947","glutathione metabolic process [GO:0006749]","-","glutathione transferase activity [GO:0004364]"]
[null,"Vradi08g07550",20215969,20217641,"60S ribosomal protein L23","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]"]
[null,"Vradi08g07560",20254157,20258848,"protein PHOSPHATE STARVATION RESPONSE 1 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi08g07570",20276271,20295243,"protein NLRC3","-","-","-"]
[null,"Vradi08g07580",20296550,20299132,"uncharacterized protein At1g03900","endocytosis [GO:0006897]","membrane [GO:0016020]","-"]
[null,"Vradi08g07590",20306746,20313754,"DNA excision repair protein CSB isoform X2","-","-","ATP binding [GO:0005524]; nucleosome-dependent ATPase activity [GO:0070615]"]
[null,"Vradi08g07600",20329780,20332779,"ABC transporter I family member 19 isoform X2","-","-","ATP binding [GO:0005524]"]
[null,"Vradi08g07610",20350128,20356844,"-","-","-","-"]
[null,"Vradi08g07620",20370352,20376214,"-","-","-","-"]
[null,"Vradi08g07630",20382585,20384030,"protein SCARECROW","-","nucleus [GO:0005634]","-"]
[null,"Vradi08g07640",20411884,20412239,"-","-","-","-"]
[null,"Vradi08g07650",20464123,20473427,"casein kinase 1-like protein 6 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi08g07660",20475898,20482255,"TBC1 domain family member 15 isoform X2","-","-","-"]
[null,"Vradi08g07670",20498902,20504829,"protein NPGR2 isoform X2","-","-","-"]
[null,"Vradi08g07680",20528772,20530400,"-","-","-","-"]
[null,"Vradi08g07690",20530763,20531752,"uncharacterized protein LOC106772308","-","-","-"]
[null,"Vradi08g07700",20565094,20570431,"Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial (EC 6.2.1.5) (Succinyl-CoA synthetase beta chain) (SCS-beta)","tricarboxylic acid cycle [GO:0006099]","mitochondrion [GO:0005739]","ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]"]
[null,"Vradi08g07710",20576196,20577053,"CRIB domain-containing protein RIC7-like","-","-","-"]
[null,"Vradi08g07720",20577504,20578862,"piriformospora indica-insensitive protein 2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g07730",20587617,20592663,"exocyst complex component EXO84B-like isoform X2","exocytosis [GO:0006887]","exocyst [GO:0000145]","-"]
[null,"Vradi08g07740",20595580,20598579,"uncharacterized protein LOC106772124 isoform X2","male meiosis II [GO:0007142]","-","-"]
[null,"Vradi08g07750",20597231,20601780,"cellulose synthase A catalytic subunit 4 [UDP-forming]","cellulose biosynthetic process [GO:0030244]","integral component of membrane [GO:0016021]","cellulose synthase (UDP-forming) activity [GO:0016760]"]
[null,"Vradi08g07760",20682025,20692303,"-","-","-","-"]
[null,"Vradi08g07770",20715229,20718291,"uncharacterized protein LOC106753964 isoform X4","-","-","-"]
[null,"Vradi08g07780",20749398,20753461,"cleavage stimulating factor 64 isoform X1","mRNA 3'-end processing [GO:0031124]","nucleus [GO:0005634]","RNA binding [GO:0003723]"]
[null,"Vradi08g07790",20758604,20762008,"tetratricopeptide repeat protein 4 homolog","-","-","Hsp90 protein binding [GO:0051879]"]
[null,"Vradi08g07800",20762860,20767638,"S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)","ethanol oxidation [GO:0006069]","-","S-(hydroxymethyl)glutathione dehydrogenase NAD activity [GO:0106322]; S-(hydroxymethyl)glutathione dehydrogenase NADP activity [GO:0106321]; zinc ion binding [GO:0008270]"]
[null,"Vradi08g07810",20829159,20833838,"3-oxoacyl-[acyl-carrier-protein] synthase","fatty acid biosynthetic process [GO:0006633]","-","3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]"]
[null,"Vradi08g07820",20834413,20834887,"-","-","-","-"]
[null,"Vradi08g07830",20905606,20909311,"uncharacterized protein LOC106771365 isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g07840",20919210,20921361,"uncharacterized protein LOC106771388","-","-","-"]
[null,"Vradi08g07850",20979289,20980944,"Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
["Chr8:22500000-23000000","Vradi08g08300",22529344,22530559,"-","-","-","-"]
[null,"Vradi08g08310",22548052,22552155,"ADP-ribosylation factor GTPase-activating protein AGD7","-","-","GTPase activator activity [GO:0005096]"]
[null,"Vradi08g08320",22587915,22590867,"luminal-binding protein 4-like","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]"]
[null,"Vradi08g08330",22593484,22595010,"uncharacterized protein LOC106772643","-","-","-"]
[null,"Vradi08g08340",22642455,22643894,"uncharacterized protein LOC106772726","-","-","-"]
[null,"Vradi08g08350",22715789,22718221,"uncharacterized protein LOC106772261","-","-","-"]
[null,"Vradi08g08360",22940141,22940425,"glycine-rich protein 23-like","-","-","-"]
[null,"Vradi08g08370",22985495,22995569,"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Ribophorin-2)","protein N-linked glycosylation [GO:0006487]","integral component of membrane [GO:0016021]; oligosaccharyltransferase complex [GO:0008250]","transferase activity [GO:0016740]"]
["Chr8:24500000-25000000","Vradi08g08730",24558190,24565115,"transcription factor bHLH3","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]"]
[null,"Vradi08g08740",24571362,24573753,"cytochrome P450 94A2","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi08g08750",24607035,24610970,"myosin-binding protein 1","-","integral component of membrane [GO:0016021]","myosin binding [GO:0017022]"]
[null,"Vradi08g08760",24623097,24627292,"iron-sulfur protein NUBPL isoform X5","iron-sulfur cluster assembly [GO:0016226]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]; iron-sulfur cluster binding [GO:0051536]"]
[null,"Vradi08g08770",24661812,24664037,"fructokinase-1","-","-","kinase activity [GO:0016301]"]
[null,"Vradi08g08780",24682094,24687855,"zinc finger CCCH domain-containing protein 14-like","-","-","DNA binding [GO:0003677]; metal ion binding [GO:0046872]; RNA binding [GO:0003723]"]
[null,"Vradi08g08790",24691541,24694290,"-","-","-","-"]
[null,"Vradi08g08800",24702297,24703960,"probable aquaporin NIP7-1","-","integral component of membrane [GO:0016021]","channel activity [GO:0015267]"]
[null,"Vradi08g08810",24713614,24716624,"uncharacterized protein LOC106770403","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; kinase activity [GO:0016301]"]
[null,"Vradi08g08820",24741956,24745945,"histone H1","nucleosome assembly [GO:0006334]","nucleosome [GO:0000786]; nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi08g08830",24857091,24857951,"40S ribosomal protein S15-4","translation [GO:0006412]","plastid [GO:0009536]; small ribosomal subunit [GO:0015935]","RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]"]
[null,"Vradi08g08840",24882292,24885829,"probable WRKY transcription factor 21 isoform X1","-","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[null,"Vradi08g08850",24933217,24938408,"uncharacterized protein LOC106772734","-","-","-"]
[null,"Vradi08g08860",24955851,24959846,"transcription factor UNE12","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]"]
[null,"Vradi08g08870",24969414,24971172,"-","-","-","-"]
[null,"Vradi08g08880",24976444,24977991,"protein OSB2, chloroplastic","DNA replication [GO:0006260]","-","single-stranded DNA binding [GO:0003697]"]
[null,"Vradi08g08890",24985072,24986191,"Auxin-induced protein 22D (Indole-3-acetic acid-induced protein ARG13)","auxin-activated signaling pathway [GO:0009734]; regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","-"]
["Chr10:0-500000","Vradi10g00010",27923,28538,"-","-","-","-"]
[null,"Vradi10g00020",28637,34337,"uncharacterized protein LOC106774643","-","-","-"]
[null,"Vradi10g00030",46002,46912,"-","-","-","-"]
[null,"Vradi10g00040",77592,80276,"-","-","-","-"]
[null,"Vradi10g00050",85367,86104,"-","-","-","-"]
[null,"Vradi10g00060",94144,99217,"-","-","-","-"]
[null,"Vradi10g00070",102075,105950,"-","-","-","-"]
[null,"Vradi10g00080",113279,118202,"Membrin","protein transport [GO:0015031]; vesicle-mediated transport [GO:0016192]","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]"]
[null,"Vradi10g00090",188885,190898,"non-specific lipid-transfer protein A-like","lipid transport [GO:0006869]","-","lipid binding [GO:0008289]"]
[null,"Vradi10g00100",371011,385643,"putative Myb family transcription factor At1g14600","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi10g00110",433591,440869,"transmembrane protein 56-B isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g00120",497622,498572,"transcription termination factor MTERF5, chloroplastic-like","DNA-templated transcription, termination [GO:0006353]; regulation of transcription, DNA-templated [GO:0006355]","-","double-stranded DNA binding [GO:0003690]"]
["Chr10:1500000-2000000","Vradi10g00310",1515230,1530948,"probable sugar phosphate/phosphate translocator At1g06470","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g00320",1548201,1551451,"-","-","-","-"]
[null,"Vradi10g00330",1613999,1617276,"septum-promoting GTP-binding protein 1","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]"]
[null,"Vradi10g00340",1656662,1660552,"protein LHCP TRANSLOCATION DEFECT","granum assembly [GO:0090391]; intracellular protein transport [GO:0006886]","chloroplast stroma [GO:0009570]","-"]
[null,"Vradi10g00350",1662768,1664850,"disease resistance RPP13-like protein 4","-","-","-"]
[null,"Vradi10g00360",1667585,1670250,"-","-","-","-"]
[null,"Vradi10g00370",1667985,1668317,"-","-","-","-"]
[null,"Vradi10g00380",1672885,1681573,"DEAD-box ATP-dependent RNA helicase 28","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[null,"Vradi10g00390",1686880,1702923,"TORTIFOLIA1-like protein 1","-","microtubule [GO:0005874]","microtubule binding [GO:0008017]"]
[null,"Vradi10g00400",1721388,1739278,"DNA polymerase I B, chloroplastic/mitochondrial","DNA-dependent DNA replication [GO:0006261]","-","3'-5' exonuclease activity [GO:0008408]; DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]"]
[null,"Vradi10g00410",1759053,1761209,"uncharacterized protein LOC106774664 isoform X3","-","-","-"]
[null,"Vradi10g00420",1835413,1850187,"uncharacterized protein LOC106775535","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g00430",1906423,1909007,"uncharacterized protein LOC111242131","-","-","-"]
[null,"Vradi10g00440",1924100,1927988,"uncharacterized protein LOC106763278 isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g00450",1946414,1948460,"-","-","-","-"]
[null,"Vradi10g00460",1952587,1954578,"uncharacterized protein LOC106775365","-","-","-"]
[null,"Vradi10g00470",1956360,1958939,"Lipoyl(octanoyl) transferase (EC 2.3.1.181)","protein lipoylation [GO:0009249]","-","lipoyl(octanoyl) transferase activity [GO:0033819]; octanoyl transferase activity (acting on glycine-cleavage complex H protein) [GO:0102555]"]
[null,"Vradi10g00480",1959662,1961514,"-","-","-","-"]
[null,"Vradi10g00490",1962043,1967332,"uncharacterized protein LOC106775718","-","-","-"]
[null,"Vradi10g00500",1976034,1978642,"Tryptophan synthase (EC 4.2.1.20)","-","-","tryptophan synthase activity [GO:0004834]"]
["Chr10:2500000-3000000","Vradi10g00710",2501277,2503953,"Probable 6-phosphogluconolactonase (EC 3.1.1.31)","carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt [GO:0006098]","-","6-phosphogluconolactonase activity [GO:0017057]"]
[null,"Vradi10g00720",2519187,2526091,"Probable 6-phosphogluconolactonase (EC 3.1.1.31)","carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt [GO:0006098]","-","6-phosphogluconolactonase activity [GO:0017057]"]
[null,"Vradi10g00730",2534677,2539414,"small G protein signaling modulator 1 isoform X1","-","-","-"]
[null,"Vradi10g00740",2570878,2574774,"cytochrome b5 domain-containing protein RLF","-","-","heme binding [GO:0020037]; metal ion binding [GO:0046872]"]
[null,"Vradi10g00750",2647081,2651218,"metal-nicotianamine transporter YSL3","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g00760",2668708,2680602,"ATPase family AAA domain-containing protein 1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]"]
[null,"Vradi10g00770",2703361,2705601,"UPF0160 protein MYG1, mitochondrial-like","-","-","-"]
[null,"Vradi10g00780",2705004,2707453,"rhodanese-like domain-containing protein 14, chloroplastic","-","-","-"]
[null,"Vradi10g00790",2717076,2717462,"-","-","-","-"]
[null,"Vradi10g00800",2720810,2721466,"-","-","-","-"]
[null,"Vradi10g00810",2739676,2743902,"molybdate-anion transporter","-","integral component of membrane [GO:0016021]","molybdate ion transmembrane transporter activity [GO:0015098]"]
[null,"Vradi10g00820",2760528,2761302,"uncharacterized protein LOC106775310 isoform X2","-","-","-"]
[null,"Vradi10g00830",2763181,2777798,"MAG2-interacting protein 2 isoform X3","protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]","endoplasmic reticulum [GO:0005783]","-"]
[null,"Vradi10g00840",2813878,2816944,"-","-","-","-"]
[null,"Vradi10g00850",2819958,2825684,"RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","ubiquitin-protein transferase activity [GO:0004842]"]
[null,"Vradi10g00860",2827586,2833056,"malignant T-cell-amplified sequence 1 homolog","-","cytoplasm [GO:0005737]","RNA binding [GO:0003723]"]
[null,"Vradi10g00870",2834590,2838924,"oligopeptide transporter 6","protein transport [GO:0015031]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g00880",2872481,2878248,"RNA-binding protein 1 isoform X4","-","-","RNA binding [GO:0003723]"]
[null,"Vradi10g00890",2887105,2889028,"Protein yippee-like","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi10g00900",2893686,2896559,"-","-","-","-"]
[null,"Vradi10g00910",2939601,2942349,"dof zinc finger protein 1 isoform X1","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
["Chr10:9500000-10000000","Vradi10g03690",9517402,9522422,"protein SMAX1-LIKE 7","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]"]
[null,"Vradi10g03700",9540758,9543178,"Omega-3 fatty acid desaturase, endoplasmic reticulum (EC 1.14.19.-) (Indole-3-acetic acid-induced protein ARG1)","unsaturated fatty acid biosynthetic process [GO:0006636]","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [GO:0016717]"]
[null,"Vradi10g03710",9564159,9571330,"RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","ubiquitin-protein transferase activity [GO:0004842]"]
[null,"Vradi10g03720",9582501,9587850,"jacalin-related lectin 3","-","-","carbohydrate binding [GO:0030246]"]
[null,"Vradi10g03730",9588168,9591171,"internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi10g03740",9599361,9601626,"PHD finger-like domain-containing protein 5B","mRNA splicing, via spliceosome [GO:0000398]","-","-"]
[null,"Vradi10g03750",9621110,9624001,"gibberellin 2-beta-dioxygenase 8","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[null,"Vradi10g03760",9634477,9645738,"uncharacterized protein LOC106774781","-","-","metal ion binding [GO:0046872]; N-acetyltransferase activity [GO:0008080]"]
[null,"Vradi10g03770",9647963,9652203,"protein PMR5-like isoform X3","-","-","-"]
[null,"Vradi10g03780",9653120,9657822,"Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)","asparagine biosynthetic process [GO:0006529]; glutamine metabolic process [GO:0006541]","-","asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]"]
[null,"Vradi10g03790",9663578,9665679,"-","-","-","-"]
[null,"Vradi10g03800",9728089,9729939,"Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[null,"Vradi10g03810",9740383,9741905,"mitogen-activated protein kinase kinase kinase 17","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi10g03820",9742175,9754970,"Clathrin heavy chain","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin complex [GO:0071439]","clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]"]
[null,"Vradi10g03830",9789244,9802662,"6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase","fructose 2,6-bisphosphate metabolic process [GO:0006003]; fructose metabolic process [GO:0006000]","-","6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; starch binding [GO:2001070]"]
[null,"Vradi10g03840",9806937,9812439,"RING-H2 finger protein ATL56","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g03850",9830903,9832513,"zinc transporter 6, chloroplastic","-","integral component of membrane [GO:0016021]","zinc ion transmembrane transporter activity [GO:0005385]"]
[null,"Vradi10g03860",9844418,9844745,"-","-","-","-"]
[null,"Vradi10g03870",9883456,9886011,"taxadiene 5-alpha hydroxylase-like","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi10g03880",9886926,9888457,"uncharacterized protein LOC106774786","-","-","-"]
["Chr11:13000000-13500000","Vradi11g10140",13021297,13026160,"probable ran guanine nucleotide release factor","protein transport [GO:0015031]","-","-"]
[null,"Vradi11g10150",13071755,13075441,"peroxisomal adenine nucleotide carrier 1","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-"]
[null,"Vradi11g10160",13172351,13173694,"delta(8)-fatty-acid desaturase 2","lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]","oxidoreductase activity [GO:0016491]"]
[null,"Vradi11g10170",13179909,13187252,"haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X2","-","-","hydrolase activity [GO:0016787]"]
[null,"Vradi11g10180",13263830,13267052,"origin of replication complex subunit 6","DNA replication [GO:0006260]","nuclear origin of replication recognition complex [GO:0005664]","DNA binding [GO:0003677]"]
[null,"Vradi11g10190",13287533,13288265,"ferredoxin--NADP reductase, leaf isozyme, chloroplastic-like","-","-","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi11g10200",13352065,13355992,"sphinganine C4-monooxygenase 1","lipid biosynthetic process [GO:0008610]","integral component of membrane [GO:0016021]","iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]"]
[null,"Vradi11g10210",13383488,13384972,"protein PHYTOCHROME KINASE SUBSTRATE 2-like","phototropism [GO:0009638]","-","kinase activity [GO:0016301]"]
[null,"Vradi11g10220",13394843,13399832,"Methyltransferase (EC 2.1.1.-)","methylation [GO:0032259]","integral component of membrane [GO:0016021]","methyltransferase activity [GO:0008168]"]
[null,"Vradi11g10230",13444967,13446408,"NAC domain-containing protein 35","regulation of transcription, DNA-templated [GO:0006355]","-","DNA binding [GO:0003677]"]
[null,"Vradi11g10240",13497860,13498060,"-","-","-","-"]
["Chr11:14000000-14500000","Vradi11g10410",14016661,14018352,"myb family transcription factor PHL8 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi11g10420",14083308,14085123,"-","-","-","-"]
[null,"Vradi11g10430",14162349,14165357,"cyclic dof factor 1","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi11g10440",14232723,14234953,"-","-","-","-"]
[null,"Vradi11g10450",14285516,14286590,"transcription factor MYB105-like","-","nucleus [GO:0005634]","-"]
[null,"Vradi11g10460",14286815,14287348,"-","-","-","-"]
[null,"Vradi11g10470",14290688,14292764,"-","-","-","-"]
[null,"Vradi11g10480",14431116,14431964,"transcription termination factor MTEF1, chloroplastic","cellular response to singlet oxygen [GO:0071452]; chloroplast organization [GO:0009658]; DNA-templated transcription, termination [GO:0006353]; embryo development ending in seed dormancy [GO:0009793]; regulation of transcription, DNA-templated [GO:0006355]","chloroplast [GO:0009507]","double-stranded DNA binding [GO:0003690]"]
[null,"Vradi11g10490",14448470,14448845,"-","-","-","-"]
[null,"Vradi11g10500",14489656,14491685,"Expansin","plant-type cell wall organization [GO:0009664]","cell wall [GO:0005618]; extracellular region [GO:0005576]; membrane [GO:0016020]","-"]
["Chr11:18000000-18500000","Vradi11g12520",18005808,18006222,"-","-","-","-"]
[null,"Vradi11g12530",18015706,18020204,"Auxin efflux carrier component","auxin-activated signaling pathway [GO:0009734]; transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-"]
[null,"Vradi11g12540",18055810,18070931,"-","-","-","-"]
[null,"Vradi11g12550",18088138,18089887,"uncharacterized protein At4g22758","-","-","-"]
[null,"Vradi11g12560",18101772,18120201,"uncharacterized protein LOC106777531 isoform X3","transcription initiation from RNA polymerase III promoter [GO:0006384]","nucleus [GO:0005634]; transcription factor TFIIIC complex [GO:0000127]","DNA binding [GO:0003677]"]
[null,"Vradi11g12570",18123594,18136043,"protein C2-DOMAIN ABA-RELATED 9","-","-","-"]
[null,"Vradi11g12580",18148697,18155601,"uncharacterized protein LOC106776500 isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi11g12590",18161321,18166894,"uncharacterized protein LOC106777122 isoform X1","-","-","-"]
[null,"Vradi11g12600",18174482,18177188,"tetraketide alpha-pyrone reductase 2","-","-","catalytic activity [GO:0003824]"]
[null,"Vradi11g12610",18185331,18186494,"-","-","-","-"]
[null,"Vradi11g12620",18215163,18220412,"lipid phosphate phosphatase 2 isoform X2","phospholipid metabolic process [GO:0006644]","integral component of membrane [GO:0016021]","lipid phosphatase activity [GO:0042577]"]
[null,"Vradi11g12630",18252036,18254053,"zinc finger protein JAGGED isoform X2","multicellular organism development [GO:0007275]","-","-"]
[null,"Vradi11g12640",18279293,18287450,"caffeoylshikimate esterase-like","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi11g12650",18322370,18322861,"VQ motif-containing protein 8, chloroplastic","-","nucleus [GO:0005634]","-"]
[null,"Vradi11g12660",18337493,18339014,"-","-","-","-"]
[null,"Vradi11g12670",18345437,18350649,"uncharacterized protein LOC106770713","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi11g12680",18402525,18405671,"acyl-acyl carrier protein thioesterase ATL3, chloroplastic","-","-","-"]
[null,"Vradi11g12690",18411578,18413929,"LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi11g12700",18419734,18423322,"nicotinamide adenine dinucleotide transporter 2, mitochondrial","-","integral component of membrane [GO:0016021]","NAD transmembrane transporter activity [GO:0051724]"]
[null,"Vradi11g12710",18429720,18434020,"-","-","-","-"]
[null,"Vradi11g12720",18434639,18435287,"-","-","-","-"]
[null,"Vradi11g12730",18451336,18475799,"DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X3","-","-","ATP binding [GO:0005524]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]"]
[null,"Vradi11g12740",18480607,18489735,"probable mannitol dehydrogenase","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi11g12750",18494126,18497566,"uncharacterized protein LOC106777134","-","integral component of membrane [GO:0016021]","-"]

{"sheet":"Table S6","index":5,"n_rows":560,"n_cols":4,"rows_kept":560,"flags":["formulas_cached_only"]}
["Supplementary Table 6 Principal component analysis (PCA) results of the 558 mungbean accessions"]
["ID","PC1","PC2","PC3"]
["C1",{"v":0.0581244,"d":"0.06"},{"v":-0.109437,"d":"-0.11"},{"v":0.00642847,"d":"0.01"}]
["C2",{"v":0.0484071,"d":"0.05"},{"v":0.0310392,"d":"0.03"},{"v":-0.0780674,"d":"-0.08"}]
["C3",{"v":0.045464,"d":"0.05"},{"v":0.0223,"d":"0.02"},{"v":-0.0494684,"d":"-0.05"}]
["C4",{"v":0.0454981,"d":"0.05"},{"v":0.0490698,"d":"0.05"},{"v":-0.0157715,"d":"-0.02"}]
["C5",{"v":0.0549585,"d":"0.05"},{"v":-0.0218959,"d":"-0.02"},{"v":-0.0398264,"d":"-0.04"}]
["C6",{"v":0.0479575,"d":"0.05"},{"v":0.034197,"d":"0.03"},{"v":-0.0744772,"d":"-0.07"}]
["C7",{"v":0.0444514,"d":"0.04"},{"v":0.0415767,"d":"0.04"},{"v":-0.0731875,"d":"-0.07"}]
["C8",{"v":0.0370522,"d":"0.04"},{"v":0.048955,"d":"0.05"},{"v":-0.0238832,"d":"-0.02"}]
["C9",{"v":0.0333445,"d":"0.03"},{"v":0.029819,"d":"0.03"},{"v":-0.0480113,"d":"-0.05"}]
["C10",{"v":0.0389598,"d":"0.04"},{"v":0.0295451,"d":"0.03"},{"v":-0.0300283,"d":"-0.03"}]
["C11",{"v":0.0387338,"d":"0.04"},{"v":0.0407149,"d":"0.04"},{"v":-0.0618262,"d":"-0.06"}]
["C12",{"v":0.0586492,"d":"0.06"},{"v":-0.0359856,"d":"-0.04"},{"v":0.00889573,"d":"0.01"}]
["C13",{"v":0.0526059,"d":"0.05"},{"v":0.0195175,"d":"0.02"},{"v":-0.0762309,"d":"-0.08"}]
["C14",{"v":0.0370189,"d":"0.04"},{"v":0.0359202,"d":"0.04"},{"v":-0.0410276,"d":"-0.04"}]
["C15",{"v":0.046735,"d":"0.05"},{"v":-0.0538644,"d":"-0.05"},{"v":-0.0457737,"d":"-0.05"}]
["C16",{"v":0.0502868,"d":"0.05"},{"v":0.042963,"d":"0.04"},{"v":-0.0718908,"d":"-0.07"}]
["C17",{"v":0.0370968,"d":"0.04"},{"v":0.0372749,"d":"0.04"},{"v":-0.0407612,"d":"-0.04"}]
["C18",{"v":0.0450946,"d":"0.05"},{"v":0.0485432,"d":"0.05"},{"v":-0.0153295,"d":"-0.02"}]
["C19",{"v":0.0361794,"d":"0.04"},{"v":0.0456276,"d":"0.05"},{"v":-0.0281398,"d":"-0.03"}]
["C20",{"v":0.0244463,"d":"0.02"},{"v":-0.0220837,"d":"-0.02"},{"v":-0.00281072,"d":"-0.00"}]
["C21",{"v":0.0367851,"d":"0.04"},{"v":0.0505345,"d":"0.05"},{"v":-0.0614828,"d":"-0.06"}]
["C22",{"v":0.0333438,"d":"0.03"},{"v":0.0403421,"d":"0.04"},{"v":-0.0477454,"d":"-0.05"}]
["C23",{"v":0.0451276,"d":"0.05"},{"v":0.0516326,"d":"0.05"},{"v":-0.0150352,"d":"-0.02"}]
["C24",{"v":0.0342071,"d":"0.03"},{"v":0.0472916,"d":"0.05"},{"v":-0.0240562,"d":"-0.02"}]
["C25",{"v":0.039146,"d":"0.04"},{"v":0.0222226,"d":"0.02"},{"v":-0.0855405,"d":"-0.09"}]
["C26",{"v":0.0536079,"d":"0.05"},{"v":-0.0628684,"d":"-0.06"},{"v":-0.0463402,"d":"-0.05"}]
["C27",{"v":0.0362258,"d":"0.04"},{"v":0.0391309,"d":"0.04"},{"v":-0.0547975,"d":"-0.05"}]
["C28",{"v":0.0522967,"d":"0.05"},{"v":-0.115791,"d":"-0.12"},{"v":-0.00795771,"d":"-0.01"}]
["C29",{"v":0.0426625,"d":"0.04"},{"v":0.0244427,"d":"0.02"},{"v":-0.0776163,"d":"-0.08"}]
["C30",{"v":0.0635848,"d":"0.06"},{"v":-0.141502,"d":"-0.14"},{"v":-0.0225452,"d":"-0.02"}]
["C31",{"v":0.0450384,"d":"0.05"},{"v":0.0509152,"d":"0.05"},{"v":-0.0151405,"d":"-0.02"}]
["C32",{"v":0.043216,"d":"0.04"},{"v":0.0262504,"d":"0.03"},{"v":-0.0661588,"d":"-0.07"}]
["C33",{"v":0.0635124,"d":"0.06"},{"v":-0.141306,"d":"-0.14"},{"v":-0.0234326,"d":"-0.02"}]
["C34",{"v":0.043643,"d":"0.04"},{"v":0.035402,"d":"0.04"},{"v":-0.0774547,"d":"-0.08"}]
["C35",{"v":0.0276231,"d":"0.03"},{"v":0.0210779,"d":"0.02"},{"v":-0.075252,"d":"-0.08"}]
["C36",{"v":0.0408719,"d":"0.04"},{"v":0.0431794,"d":"0.04"},{"v":-0.0630283,"d":"-0.06"}]
["C37",{"v":0.0369341,"d":"0.04"},{"v":0.0443494,"d":"0.04"},{"v":-0.0457014,"d":"-0.05"}]
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["C481",{"v":-0.0601925,"d":"-0.06"},{"v":-0.0188818,"d":"-0.02"},{"v":-0.02505,"d":"-0.03"}]
["C482",{"v":-0.0533659,"d":"-0.05"},{"v":-0.00651235,"d":"-0.01"},{"v":-0.0176132,"d":"-0.02"}]
["C483",{"v":-0.0645736,"d":"-0.06"},{"v":-0.0181115,"d":"-0.02"},{"v":-0.0282343,"d":"-0.03"}]
["C484",{"v":-0.0577353,"d":"-0.06"},{"v":-0.019317,"d":"-0.02"},{"v":-0.0243329,"d":"-0.02"}]
["C485",{"v":-0.0577547,"d":"-0.06"},{"v":-0.0195135,"d":"-0.02"},{"v":-0.0236319,"d":"-0.02"}]
["C486",{"v":-0.0581102,"d":"-0.06"},{"v":-0.0032314,"d":"-0.00"},{"v":0.00764534,"d":"0.01"}]
["C487",{"v":0.0268426,"d":"0.03"},{"v":-0.0183641,"d":"-0.02"},{"v":-0.0155944,"d":"-0.02"}]
["C488",{"v":0.0467458,"d":"0.05"},{"v":-0.0199365,"d":"-0.02"},{"v":0.00659166,"d":"0.01"}]
["C489",{"v":-0.0586714,"d":"-0.06"},{"v":-0.0170773,"d":"-0.02"},{"v":-0.020968,"d":"-0.02"}]
["C490",{"v":-0.0191176,"d":"-0.02"},{"v":-0.00240891,"d":"-0.00"},{"v":0.00805478,"d":"0.01"}]
["C491",{"v":-0.055817,"d":"-0.06"},{"v":-0.0198051,"d":"-0.02"},{"v":-0.0232046,"d":"-0.02"}]
["C492",{"v":-0.0574651,"d":"-0.06"},{"v":-0.0191824,"d":"-0.02"},{"v":-0.0230577,"d":"-0.02"}]
["C493",{"v":0.0264206,"d":"0.03"},{"v":-0.0239642,"d":"-0.02"},{"v":0.167939,"d":"0.17"}]
["C494",{"v":0.056453,"d":"0.06"},{"v":-0.0723442,"d":"-0.07"},{"v":-0.0231787,"d":"-0.02"}]
["C495",{"v":-0.011464,"d":"-0.01"},{"v":-0.0191554,"d":"-0.02"},{"v":0.0534931,"d":"0.05"}]
["C496",{"v":-0.0202004,"d":"-0.02"},{"v":0.00523018,"d":"0.01"},{"v":-0.00687842,"d":"-0.01"}]
["C497",{"v":0.00948505,"d":"0.01"},{"v":0.0323264,"d":"0.03"},{"v":0.0814998,"d":"0.08"}]
["C498",{"v":-0.00507791,"d":"-0.01"},{"v":0.0278297,"d":"0.03"},{"v":0.0495717,"d":"0.05"}]
["C499",{"v":0.006058,"d":"0.01"},{"v":0.0281514,"d":"0.03"},{"v":0.0853454,"d":"0.09"}]
["C500",{"v":0.0110954,"d":"0.01"},{"v":0.0187593,"d":"0.02"},{"v":0.111446,"d":"0.11"}]
["C501",{"v":0.0139512,"d":"0.01"},{"v":0.0318349,"d":"0.03"},{"v":0.0175257,"d":"0.02"}]
["C502",{"v":-0.00705226,"d":"-0.01"},{"v":0.0152651,"d":"0.02"},{"v":0.0287588,"d":"0.03"}]
["C503",{"v":0.00201543,"d":"0.00"},{"v":0.0256279,"d":"0.03"},{"v":0.0593571,"d":"0.06"}]
["C504",{"v":-0.0400364,"d":"-0.04"},{"v":0.00270151,"d":"0.00"},{"v":0.00680802,"d":"0.01"}]
["C505",{"v":-0.00784594,"d":"-0.01"},{"v":0.0171856,"d":"0.02"},{"v":0.0296452,"d":"0.03"}]
["C506",{"v":-0.0644918,"d":"-0.06"},{"v":-0.0166932,"d":"-0.02"},{"v":-0.0185135,"d":"-0.02"}]
["C507",{"v":-0.0626722,"d":"-0.06"},{"v":-0.0162249,"d":"-0.02"},{"v":-0.0352862,"d":"-0.04"}]
["C508",{"v":-0.0574819,"d":"-0.06"},{"v":-0.0150676,"d":"-0.02"},{"v":-0.0105512,"d":"-0.01"}]
["C509",{"v":-0.0038258,"d":"-0.00"},{"v":0.0171892,"d":"0.02"},{"v":0.0237168,"d":"0.02"}]
["C510",{"v":-0.0588478,"d":"-0.06"},{"v":-0.0129346,"d":"-0.01"},{"v":-0.0243607,"d":"-0.02"}]
["C511",{"v":-0.0653022,"d":"-0.07"},{"v":-0.0194238,"d":"-0.02"},{"v":-0.00936166,"d":"-0.01"}]
["C512",{"v":-0.0629903,"d":"-0.06"},{"v":-0.0171075,"d":"-0.02"},{"v":-0.0421024,"d":"-0.04"}]
["C513",{"v":-0.0646788,"d":"-0.06"},{"v":-0.0194318,"d":"-0.02"},{"v":-0.022709,"d":"-0.02"}]
["C514",{"v":-0.0548755,"d":"-0.05"},{"v":-0.00477719,"d":"-0.00"},{"v":-0.0125186,"d":"-0.01"}]
["C515",{"v":-0.0509374,"d":"-0.05"},{"v":-0.00811,"d":"-0.01"},{"v":-0.0120221,"d":"-0.01"}]
["C516",{"v":-0.0620997,"d":"-0.06"},{"v":-0.0172945,"d":"-0.02"},{"v":-0.0131124,"d":"-0.01"}]
["C517",{"v":-0.0643563,"d":"-0.06"},{"v":-0.0165686,"d":"-0.02"},{"v":-0.037389,"d":"-0.04"}]
["C518",{"v":-0.00109866,"d":"-0.00"},{"v":0.0226519,"d":"0.02"},{"v":0.0286341,"d":"0.03"}]
["C519",{"v":-0.0299642,"d":"-0.03"},{"v":0.00938894,"d":"0.01"},{"v":0.0185273,"d":"0.02"}]
["C520",{"v":0.0183344,"d":"0.02"},{"v":-0.032326,"d":"-0.03"},{"v":-0.00132273,"d":"-0.00"}]
["C521",{"v":-0.0544267,"d":"-0.05"},{"v":-0.0091024,"d":"-0.01"},{"v":-0.0102669,"d":"-0.01"}]
["C522",{"v":-0.0612452,"d":"-0.06"},{"v":-0.0180726,"d":"-0.02"},{"v":-0.0415825,"d":"-0.04"}]
["C523",{"v":-0.0664252,"d":"-0.07"},{"v":-0.0192573,"d":"-0.02"},{"v":-0.016324,"d":"-0.02"}]
["C524",{"v":-0.0348988,"d":"-0.03"},{"v":0.00472529,"d":"0.00"},{"v":0.00845596,"d":"0.01"}]
["C525",{"v":0.0266145,"d":"0.03"},{"v":-0.011647,"d":"-0.01"},{"v":0.110398,"d":"0.11"}]
["C526",{"v":0.0515994,"d":"0.05"},{"v":-0.0352888,"d":"-0.04"},{"v":-0.00610101,"d":"-0.01"}]
["C527",{"v":-0.0260433,"d":"-0.03"},{"v":0.00257938,"d":"0.00"},{"v":-0.0200184,"d":"-0.02"}]
["C528",{"v":-0.054385,"d":"-0.05"},{"v":-0.0139621,"d":"-0.01"},{"v":-0.00656742,"d":"-0.01"}]
["C529",{"v":0.00508449,"d":"0.01"},{"v":0.0315359,"d":"0.03"},{"v":0.0475182,"d":"0.05"}]
["C530",{"v":0.064243,"d":"0.06"},{"v":-0.1414,"d":"-0.14"},{"v":-0.0242499,"d":"-0.02"}]
["C531",{"v":-0.0620037,"d":"-0.06"},{"v":-0.0151973,"d":"-0.02"},{"v":-0.00556682,"d":"-0.01"}]
["C532",{"v":-0.0495427,"d":"-0.05"},{"v":-0.0106524,"d":"-0.01"},{"v":-0.013099,"d":"-0.01"}]
["C533",{"v":-0.0595036,"d":"-0.06"},{"v":-0.0186534,"d":"-0.02"},{"v":-0.0217403,"d":"-0.02"}]
["C534",{"v":-0.0537254,"d":"-0.05"},{"v":-0.0174029,"d":"-0.02"},{"v":-0.0189607,"d":"-0.02"}]
["C535",{"v":0.0361809,"d":"0.04"},{"v":0.0362647,"d":"0.04"},{"v":-0.0422196,"d":"-0.04"}]
["C536",{"v":0.00772622,"d":"0.01"},{"v":-0.044294,"d":"-0.04"},{"v":0.000859032,"d":"0.00"}]
["C537",{"v":0.0452972,"d":"0.05"},{"v":-0.0928527,"d":"-0.09"},{"v":-0.0107157,"d":"-0.01"}]
["C538",{"v":0.0254503,"d":"0.03"},{"v":-0.012337,"d":"-0.01"},{"v":0.0460269,"d":"0.05"}]
["C539",{"v":-0.0506606,"d":"-0.05"},{"v":-0.00932452,"d":"-0.01"},{"v":-0.0120571,"d":"-0.01"}]
["C540",{"v":0.0424863,"d":"0.04"},{"v":-0.0249369,"d":"-0.02"},{"v":-0.00217341,"d":"-0.00"}]
["C541",{"v":0.0378041,"d":"0.04"},{"v":-0.0388388,"d":"-0.04"},{"v":0.0362853,"d":"0.04"}]
["C542",{"v":0.0527304,"d":"0.05"},{"v":-0.02986,"d":"-0.03"},{"v":0.0203314,"d":"0.02"}]
["C543",{"v":-0.0497127,"d":"-0.05"},{"v":-0.0170812,"d":"-0.02"},{"v":-0.0203773,"d":"-0.02"}]
["C544",{"v":-0.0490225,"d":"-0.05"},{"v":-0.0174104,"d":"-0.02"},{"v":-0.0200267,"d":"-0.02"}]
["C545",{"v":-0.0662181,"d":"-0.07"},{"v":-0.0148874,"d":"-0.01"},{"v":-0.00757723,"d":"-0.01"}]
["C546",{"v":-0.0649697,"d":"-0.06"},{"v":-0.0151358,"d":"-0.02"},{"v":-0.0104482,"d":"-0.01"}]
["C547",{"v":-0.0596675,"d":"-0.06"},{"v":-0.0148286,"d":"-0.01"},{"v":0.00473236,"d":"0.00"}]
["C548",{"v":-0.0544255,"d":"-0.05"},{"v":-0.0249851,"d":"-0.02"},{"v":-0.00584294,"d":"-0.01"}]
["C549",{"v":0.055254,"d":"0.06"},{"v":-0.0174715,"d":"-0.02"},{"v":-0.0362716,"d":"-0.04"}]
["C550",{"v":0.0363296,"d":"0.04"},{"v":-0.03491,"d":"-0.03"},{"v":0.0347225,"d":"0.03"}]
["C551",{"v":0.0366383,"d":"0.04"},{"v":-0.0671413,"d":"-0.07"},{"v":0.0183177,"d":"0.02"}]
["C552",{"v":0.0072985,"d":"0.01"},{"v":0.034355,"d":"0.03"},{"v":0.0434748,"d":"0.04"}]
["C553",{"v":-0.0588225,"d":"-0.06"},{"v":-0.0143549,"d":"-0.01"},{"v":-0.0234731,"d":"-0.02"}]
["C554",{"v":-0.0517231,"d":"-0.05"},{"v":-0.0105556,"d":"-0.01"},{"v":-0.00357804,"d":"-0.00"}]
["C556",{"v":-0.0589203,"d":"-0.06"},{"v":-0.0112445,"d":"-0.01"},{"v":-0.0178462,"d":"-0.02"}]
["C557",{"v":0.00746016,"d":"0.01"},{"v":-0.0342698,"d":"-0.03"},{"v":0.000225676,"d":"0.00"}]
["C558",{"v":0.0307971,"d":"0.03"},{"v":-0.0615962,"d":"-0.06"},{"v":0.0550025,"d":"0.06"}]
["C559",{"v":0.0297133,"d":"0.03"},{"v":-0.036547,"d":"-0.04"},{"v":0.113013,"d":"0.11"}]
["C560",{"v":0.0505719,"d":"0.05"},{"v":-0.0817895,"d":"-0.08"},{"v":0.019017,"d":"0.02"}]
["C575",{"v":-0.0307353,"d":"-0.03"},{"v":0.00435861,"d":"0.00"},{"v":-0.00129975,"d":"-0.00"}]
["C576",{"v":-0.0317106,"d":"-0.03"},{"v":-0.00912173,"d":"-0.01"},{"v":0.00178493,"d":"0.00"}]

{"sheet":"Table S7","index":6,"n_rows":560,"n_cols":3,"rows_kept":560,"flags":["formulas_cached_only"]}
["Supplementary Table 7 Ancestry proportion estimates for each accession when the ancestral population was specified as two"]
["ID","K1 (blue)","K2 (red)"]
["C1",0.957,0.043]
["C2",0.999,0.001]
["C3",0.999,0.001]
["C4",0.999,0.001]
["C5",0.986,0.014]
["C6",0.998,0.002]
["C7",0.999,0.001]
["C8",0.999,0.001]
["C9",0.997,0.003]
["C10",0.983,0.017]
["C11",0.996,0.004]
["C12",0.997,0.003]
["C13",0.997,0.003]
["C14",0.99,0.01]
["C15",0.97,0.03]
["C16",0.999,0.001]
["C17",0.993,0.007]
["C18",0.999,0.001]
["C19",0.999,0.001]
["C20",0.718,0.282]
["C21",0.999,0.001]
["C22",0.984,0.016]
["C23",0.999,0.001]
["C24",0.997,0.003]
["C25",0.871,0.129]
["C26",0.999,0.001]
["C27",0.987,0.013]
["C28",0.798,0.202]
["C29",0.948,0.052]
["C30",0.999,0.001]
["C31",0.999,0.001]
["C32",0.957,0.043]
["C33",0.999,0.001]
["C34",0.999,0.001]
["C35",0.824,0.176]
["C36",0.998,0.002]
["C37",0.999,0.001]
["C38",0.999,0.001]
["C39",0.929,0.071]
["C40",0.998,0.002]
["C41",0.999,0.001]
["C42",0.999,0.001]
["C43",0.999,0.001]
["C44",0.973,0.027]
["C45",0.999,0.001]
["C46",0.999,0.001]
["C47",0.999,0.001]
["C48",0.999,0.001]
["C49",0.998,0.002]
["C50",0.999,0.001]
["C51",0.992,0.008]
["C52",0.959,0.041]
["C53",0.994,0.006]
["C54",0.951,0.049]
["C55",0.955,0.045]
["C56",0.004,0.996]
["C57",0.858,0.142]
["C58",0.966,0.034]
["C59",0.965,0.035]
["C60",0.787,0.213]
["C61",0.949,0.051]
["C62",0.928,0.072]
["C63",0.923,0.077]
["C64",0.838,0.162]
["C65",0,1]
["C66",0.999,0.001]
["C67",0.753,0.247]
["C68",0.75,0.25]
["C69",0.976,0.024]
["C70",0.999,0.001]
["C71",0.962,0.038]
["C72",0.95,0.05]
["C73",0.984,0.016]
["C74",0.923,0.077]
["C75",0.776,0.224]
["C76",0.971,0.029]
["C77",0.933,0.067]
["C78",0.999,0.001]
["C79",0.902,0.098]
["C80",0.936,0.064]
["C81",0.983,0.017]
["C82",0.998,0.002]
["C83",0.987,0.013]
["C84",0.999,0.001]
["C85",0.902,0.098]
["C86",0.942,0.058]
["C87",0.932,0.068]
["C88",0.999,0.001]
["C89",0.997,0.003]
["C90",0.973,0.027]
["C91",0.967,0.033]
["C92",0.873,0.127]
["C93",0.875,0.125]
["C94",0.993,0.007]
["C95",0.694,0.306]
["C96",0.991,0.009]
["C97",0.999,0.001]
["C98",0.933,0.067]
["C100",0.87,0.13]
["C101",0.874,0.126]
["C102",0.817,0.183]
["C103",0.833,0.167]
["C104",0.773,0.227]
["C105",0.791,0.209]
["C106",0.949,0.051]
["C107",0,1]
["C108",0.888,0.112]
["C109",0.903,0.097]
["C110",0.975,0.025]
["C111",0.723,0.277]
["C112",0.75,0.25]
["C113",0.895,0.105]
["C114",0,1]
["C115",0.969,0.031]
["C116",0.938,0.062]
["C117",0.956,0.044]
["C118",0.881,0.119]
["C119",0.968,0.032]
["C120",0.666,0.334]
["C121",0.882,0.118]
["C122",0.746,0.254]
["C123",0.982,0.018]
["C124",0.939,0.061]
["C125",0.884,0.116]
["C126",0.941,0.059]
["C127",0.944,0.056]
["C128",0.999,0.001]
["C129",0.115,0.885]
["C130",0.795,0.205]
["C131",0.999,0.001]
["C132",0.745,0.255]
["C133",0.848,0.152]
["C134",0.685,0.315]
["C135",0.998,0.002]
["C136",0.967,0.033]
["C137",0.964,0.036]
["C138",0.999,0.001]
["C139",0.928,0.072]
["C140",0.834,0.166]
["C141",0.998,0.002]
["C142",0.999,0.001]
["C143",0.991,0.009]
["C144",0.633,0.367]
["C145",0.954,0.046]
["C146",0.999,0.001]
["C147",0.148,0.852]
["C149",0.999,0.001]
["C150",0.949,0.051]
["C151",0.941,0.059]
["C152",0,1]
["C153",0,1]
["C154",0.679,0.321]
["C155",0.884,0.116]
["C156",0.999,0.001]
["C157",0.994,0.006]
["C158",0.846,0.154]
["C159",0.999,0.001]
["C160",0.999,0.001]
["C161",0.78,0.22]
["C162",0.999,0.001]
["C163",0.999,0.001]
["C164",0.214,0.786]
["C165",0.85,0.15]
["C166",0.996,0.004]
["C167",0.844,0.156]
["C168",0.996,0.004]
["C169",0.991,0.009]
["C170",0.999,0.001]
["C171",0.999,0.001]
["C172",0.981,0.019]
["C173",0.874,0.126]
["C174",0.562,0.438]
["C175",0.833,0.167]
["C176",0.999,0.001]
["C177",0.999,0.001]
["C178",0.887,0.113]
["C179",0.891,0.109]
["C180",0.999,0.001]
["C181",0.999,0.001]
["C182",0.002,0.998]
["C183",0.952,0.048]
["C184",0.688,0.312]
["C185",0.71,0.29]
["C186",0.731,0.269]
["C187",0.231,0.769]
["C188",0.001,0.999]
["C189",0.725,0.275]
["C190",0.867,0.133]
["C191",0.999,0.001]
["C192",0.837,0.163]
["C193",0.233,0.767]
["C194",0.778,0.222]
["C195",0.821,0.179]
["C196",0.832,0.168]
["C197",0.821,0.179]
["C198",0.906,0.094]
["C199",0.77,0.23]
["C200",0.87,0.13]
["C201",0.831,0.169]
["C202",0.999,0.001]
["C203",0.952,0.048]
["C204",0.82,0.18]
["C205",0.838,0.162]
["C206",0.999,0.001]
["C207",0.955,0.045]
["C208",0.038,0.962]
["C209",0.999,0.001]
["C210",0.999,0.001]
["C211",0.772,0.228]
["C212",0.847,0.153]
["C213",0.98,0.02]
["C214",0.871,0.129]
["C215",0.999,0.001]
["C216",0.678,0.322]
["C217",0.148,0.852]
["C218",0.65,0.35]
["C219",0.834,0.166]
["C220",0.975,0.025]
["C221",0.929,0.071]
["C222",0,1]
["C223",0.234,0.766]
["C224",0.999,0.001]
["C225",0.835,0.165]
["C226",0.864,0.136]
["C227",0.999,0.001]
["C228",0.817,0.183]
["C229",0.999,0.001]
["C230",0.999,0.001]
["C231",0.799,0.201]
["C232",0.036,0.964]
["C233",0.797,0.203]
["C234",0.999,0.001]
["C235",0.908,0.092]
["C236",0.975,0.025]
["C238",0.665,0.335]
["C239",0.999,0.001]
["C240",0.999,0.001]
["C241",0.682,0.318]
["C242",0.66,0.34]
["C243",0.672,0.328]
["C244",0,1]
["C245",0.237,0.763]
["C246",0.997,0.003]
["C247",0.947,0.053]
["C248",0.958,0.042]
["C249",0.763,0.237]
["C250",0.72,0.28]
["C251",0.001,0.999]
["C252",0.973,0.027]
["C253",0.593,0.407]
["C254",0.701,0.299]
["C255",0.584,0.416]
["C256",0.104,0.896]
["C257",0.999,0.001]
["C258",0.676,0.324]
["C259",0.798,0.202]
["C260",0.792,0.208]
["C261",0.675,0.325]
["C262",0.632,0.368]
["C263",0.24,0.76]
["C264",0.755,0.245]
["C265",0.726,0.274]
["C266",0.709,0.291]
["C267",0.695,0.305]
["C268",0,1]
["C269",0,1]
["C270",0,1]
["C271",0.935,0.065]
["C272",0.657,0.343]
["C273",0.811,0.189]
["C274",0.649,0.351]
["C275",0.669,0.331]
["C276",0.115,0.885]
["C277",0.008,0.992]
["C278",0.161,0.839]
["C279",0.518,0.482]
["C280",0.028,0.972]
["C281",0.163,0.837]
["C282",0.571,0.429]
["C283",0,1]
["C284",0.952,0.048]
["C285",0.167,0.833]
["C286",0.953,0.047]
["C287",0,1]
["C288",0.583,0.417]
["C289",0.669,0.331]
["C290",0,1]
["C291",0.52,0.48]
["C292",0,1]
["C293",0.552,0.448]
["C294",0.005,0.995]
["C295",0,1]
["C296",0.596,0.404]
["C297",0,1]
["C298",0.035,0.965]
["C299",0.04,0.96]
["C300",0.55,0.45]
["C301",0.654,0.346]
["C302",0,1]
["C303",0,1]
["C304",0.705,0.295]
["C305",0.25,0.75]
["C306",0.169,0.831]
["C307",0,1]
["C308",0.151,0.849]
["C309",0.547,0.453]
["C310",0.131,0.869]
["C311",0.091,0.909]
["C312",0.518,0.482]
["C313",0.251,0.749]
["C314",0,1]
["C315",0.252,0.748]
["C316",0.258,0.742]
["C317",0.262,0.738]
["C318",0.021,0.979]
["C319",0.012,0.988]
["C320",0.265,0.735]
["C321",0.663,0.337]
["C322",0.693,0.307]
["C323",0.273,0.727]
["C324",0.001,0.999]
["C325",0.005,0.995]
["C326",0,1]
["C327",0.066,0.934]
["C328",0.077,0.923]
["C329",0.602,0.398]
["C330",0,1]
["C331",0.808,0.192]
["C332",0.277,0.723]
["C333",0.836,0.164]
["C334",0.278,0.722]
["C335",0.286,0.714]
["C336",0.294,0.706]
["C337",0,1]
["C338",0.055,0.945]
["C339",0.19,0.81]
["C340",0.294,0.706]
["C341",0.75,0.25]
["C342",0.507,0.493]
["C343",0.001,0.999]
["C344",0,1]
["C345",0.001,0.999]
["C346",0.002,0.998]
["C347",0.09,0.91]
["C348",0.117,0.883]
["C349",0.294,0.706]
["C350",0.023,0.977]
["C351",0.297,0.703]
["C352",0,1]
["C353",0.652,0.348]
["C354",0.002,0.998]
["C355",0,1]
["C356",0,1]
["C357",0,1]
["C358",0,1]
["C359",0.298,0.702]
["C360",0.144,0.856]
["C361",0.298,0.702]
["C362",0.155,0.845]
["C363",0,1]
["C364",0,1]
["C365",0.018,0.982]
["C366",0.193,0.807]
["C367",0.041,0.959]
["C368",0.053,0.947]
["C369",0.299,0.701]
["C370",0.314,0.686]
["C371",0.325,0.675]
["C372",0.326,0.674]
["C373",0.027,0.973]
["C374",0,1]
["C375",0.002,0.998]
["C376",0,1]
["C377",0.037,0.963]
["C378",0.005,0.995]
["C379",0.33,0.67]
["C380",0.334,0.666]
["C381",0.68,0.32]
["C382",0.08,0.92]
["C383",0.335,0.665]
["C384",0.336,0.664]
["C385",0.002,0.998]
["C386",0.639,0.361]
["C387",0.002,0.998]
["C388",0.567,0.433]
["C389",0.156,0.844]
["C390",0.348,0.652]
["C391",0.001,0.999]
["C392",0,1]
["C393",0,1]
["C394",0,1]
["C395",0,1]
["C396",0.013,0.987]
["C397",0.067,0.933]
["C398",0.112,0.888]
["C399",0.354,0.646]
["C400",0,1]
["C401",0.012,0.988]
["C402",0.667,0.333]
["C403",0.57,0.43]
["C404",0.001,0.999]
["C405",0.71,0.29]
["C406",0,1]
["C407",0,1]
["C408",0,1]
["C409",0.893,0.107]
["C410",0.603,0.397]
["C411",0.737,0.263]
["C412",0.359,0.641]
["C413",0.362,0.638]
["C414",0.922,0.078]
["C415",0.967,0.033]
["C416",0.383,0.617]
["C417",0.834,0.166]
["C418",0.395,0.605]
["C419",0.999,0.001]
["C420",0.396,0.604]
["C421",0.999,0.001]
["C422",0.955,0.045]
["C423",0.001,0.999]
["C424",0.999,0.001]
["C425",0.814,0.186]
["C426",0.397,0.603]
["C427",0.402,0.598]
["C428",0.842,0.158]
["C429",0.403,0.597]
["C430",0.976,0.024]
["C431",0.41,0.59]
["C432",0.999,0.001]
["C433",0.415,0.585]
["C434",0.84,0.16]
["C435",0,1]
["C436",0.415,0.585]
["C437",0.998,0.002]
["C438",0.418,0.582]
["C439",0.428,0.572]
["C440",0.999,0.001]
["C441",0.922,0.078]
["C442",0.676,0.324]
["C443",0.007,0.993]
["C444",0,1]
["C445",0.566,0.434]
["C446",0.074,0.926]
["C447",0.866,0.134]
["C448",0.001,0.999]
["C449",0,1]
["C450",0.581,0.419]
["C451",0.707,0.293]
["C452",0.432,0.568]
["C453",0.7,0.3]
["C454",0.968,0.032]
["C455",0.111,0.889]
["C456",0.705,0.295]
["C457",0,1]
["C458",0.439,0.561]
["C459",0.002,0.998]
["C460",0.141,0.859]
["C461",0.441,0.559]
["C462",0.651,0.349]
["C463",0.643,0.357]
["C464",0.999,0.001]
["C465",0.996,0.004]
["C466",0.945,0.055]
["C467",0.998,0.002]
["C468",0.613,0.387]
["C469",0.756,0.244]
["C470",0.518,0.482]
["C471",0.737,0.263]
["C472",0,1]
["C473",0,1]
["C474",0.855,0.145]
["C475",0.999,0.001]
["C476",0.887,0.113]
["C477",0.865,0.135]
["C478",0.443,0.557]
["C479",0.126,0.874]
["C480",0.504,0.496]
["C481",0.444,0.556]
["C482",0.054,0.946]
["C483",0.445,0.555]
["C484",0.451,0.549]
["C485",0.453,0.547]
["C486",0.054,0.946]
["C487",0.699,0.301]
["C488",0.928,0.072]
["C489",0.197,0.803]
["C490",0,1]
["C491",0.462,0.538]
["C492",0.462,0.538]
["C493",0.724,0.276]
["C494",0.999,0.001]
["C495",0,1]
["C496",0,1]
["C497",0.734,0.266]
["C498",0.549,0.451]
["C499",0.683,0.317]
["C500",0.712,0.288]
["C501",0.873,0.127]
["C502",0.517,0.483]
["C503",0.591,0.409]
["C504",0.001,0.999]
["C505",0,1]
["C506",0.465,0.535]
["C507",0.468,0.532]
["C508",0.199,0.801]
["C509",0.596,0.404]
["C510",0.201,0.799]
["C511",0.47,0.53]
["C512",0.48,0.52]
["C513",0.201,0.799]
["C514",0,1]
["C515",0,1]
["C516",0.142,0.858]
["C517",0.491,0.509]
["C518",0.641,0.359]
["C519",0,1]
["C520",0.534,0.466]
["C521",0.082,0.918]
["C522",0.211,0.789]
["C523",0.492,0.508]
["C524",0,1]
["C525",0.829,0.171]
["C526",0.997,0.003]
["C527",0,1]
["C528",0.068,0.932]
["C529",0.729,0.271]
["C530",0.999,0.001]
["C531",0.159,0.841]
["C532",0,1]
["C533",0.494,0.506]
["C534",0.097,0.903]
["C535",0.997,0.003]
["C536",0,1]
["C537",0.879,0.121]
["C538",0.732,0.268]
["C539",0,1]
["C540",0.951,0.049]
["C541",0.816,0.184]
["C542",0.998,0.002]
["C543",0,1]
["C544",0,1]
["C545",0.212,0.788]
["C546",0.161,0.839]
["C547",0.001,0.999]
["C548",0.019,0.981]
["C549",0.964,0.036]
["C550",0.862,0.138]
["C551",0.714,0.286]
["C552",0.739,0.261]
["C553",0.118,0.882]
["C554",0.044,0.956]
["C556",0.031,0.969]
["C557",0.583,0.417]
["C558",0.837,0.163]
["C559",0.717,0.283]
["C560",0.879,0.121]
["C575",0,1]
["C576",0.001,0.999]

{"sheet":"Table S8","index":7,"n_rows":16674,"n_cols":6,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0},"flags":["formulas_cached_only"]}
["Supplementary Table 8 Average nucleotide diversity (π) in sliding windows in all accessions and two subpopulations"]
["Chromosome","Bin start position (bp)","Bin end position (bp)","π in all accessions","π in NS","π in SS"]
[1,1,100000,0.000652151,0.000480601,0.000713293]
[1,20001,120000,0.000404952,0.000386476,0.000387217]
[1,40001,140000,0.000351471,0.00033172,0.000326664]
[1,60001,160000,0.000258592,0.000241119,0.000233187]
[1,80001,180000,0.000172003,0.000153687,0.000143244]
[1,100001,200000,{"v":8.31726e-05,"d":"8.32E-05"},{"v":7.43814e-05,"d":"7.44E-05"},{"v":5.93395e-05,"d":"5.93E-05"}]
[1,120001,220000,0.000459929,0.000458211,0.000411573]
[1,140001,240000,0.000451357,0.000454874,0.000406967]
[1,160001,260000,0.000459209,0.000463032,0.000412529]
[1,180001,280000,0.000512028,0.000476915,0.000485189]
[1,200001,300000,0.000662875,0.000511271,0.000687869]
[1,220001,320000,0.000282115,0.000128448,0.00032684]
[1,240001,340000,0.000438315,0.000266209,0.000489854]
[1,260001,360000,0.000532532,0.000363495,0.00058805]
[1,280001,380000,0.000549785,0.000407682,0.000584793]
[1,300001,400000,0.000584793,0.000557612,0.000547958]
[1,320001,420000,0.00178136,0.00122999,0.00120222]
[1,340001,440000,0.00303765,0.00188231,0.00197184]
[1,360001,460000,0.00295844,0.00178866,0.00188679]
[1,380001,480000,0.00316971,0.00186741,0.00204653]
[1,400001,500000,0.00368563,0.00208822,0.00243623]
[1,420001,520000,0.0049439,0.0028313,0.00381846]
[1,440001,540000,0.00473117,0.00276034,0.00387893]
[1,460001,560000,0.00484664,0.00289063,0.00398898]
[1,480001,580000,0.00463539,0.00282098,0.00383374]
[1,500001,600000,0.00422566,0.0027123,0.00356558]
[1,520001,620000,0.00180461,0.00132321,0.0015653]
[1,540001,640000,0.000635758,0.000631977,0.000605899]
[1,560001,660000,0.000503251,0.000498999,0.00047966]
[1,580001,680000,0.0010147,0.00139748,0.000700644]
[1,600001,700000,0.000728669,0.00110507,0.000419764]
[1,620001,720000,0.00112953,0.00152792,0.00076676]
[1,640001,740000,0.00247565,0.00228586,0.0015057]
[1,660001,760000,0.00327215,0.00274335,0.00196459]
[1,680001,780000,0.00328083,0.00210382,0.00200664]
[1,700001,800000,0.00401925,0.00270207,0.00251121]
[1,720001,820000,0.00426801,0.00293698,0.00277925]
[1,740001,840000,0.00346918,0.00266833,0.00252038]
[1,760001,860000,0.00307461,0.00264528,0.00242969]
[1,780001,880000,0.00272118,0.00256962,0.00231845]
[1,800001,900000,0.00258717,0.00259374,0.00237376]
[1,820001,920000,0.00188851,0.00189089,0.00171492]
[1,840001,940000,0.00133671,0.00139479,0.0012292]
[1,860001,960000,0.00124534,0.00132372,0.00111982]
[1,880001,980000,0.00114931,0.00118978,0.00105489]
[1,900001,1000000,0.000561476,0.000575802,0.000512935]
[1,920001,1020000,0.00164482,0.00106138,0.00171593]
[1,940001,1040000,0.00266905,0.00159779,0.00283775]
[1,960001,1060000,0.00370825,0.00214667,0.00397278]
[1,980001,1080000,0.00556558,0.00365828,0.00573798]
[1,1000001,1100000,0.00793461,0.00570172,0.00798445]
[1,1020001,1120000,0.00863222,0.00607652,0.00871131]
[1,1040001,1140000,0.00968369,0.00718628,0.00958443]
[1,1060001,1160000,0.00845128,0.00635719,0.00831438]
[1,1080001,1180000,0.00673796,0.00498964,0.00664292]
[1,1100001,1200000,0.00464235,0.00319182,0.00467166]
[1,1120001,1220000,0.00453775,0.00355841,0.00443987]
[1,1140001,1240000,0.00323817,0.00233158,0.00322372]
[1,1160001,1260000,0.00401614,0.00297828,0.00392043]
[1,1180001,1280000,0.00541988,0.00425466,0.0051438]
[1,1200001,1300000,0.00707851,0.00559637,0.00657459]
[1,1220001,1320000,0.0065716,0.00505932,0.00599462]
[1,1240001,1340000,0.00806742,0.00595807,0.00742038]
[1,1260001,1360000,0.00869449,0.00639386,0.00803059]
[1,1280001,1380000,0.00870068,0.00663311,0.00787112]
[1,1300001,1400000,0.00684374,0.00511334,0.00624477]
[1,1320001,1420000,0.00608737,0.00481792,0.00554648]
[1,1340001,1440000,0.00407217,0.00375104,0.00360476]
[1,1360001,1460000,0.00290071,0.00296106,0.00250123]
[1,1380001,1480000,0.00128457,0.0012614,0.00126779]
[1,1400001,1500000,0.00118889,0.00117938,0.00116704]
[1,1420001,1520000,0.0010709,0.00117089,0.000917888]
[1,1440001,1540000,0.000815355,0.0009148,0.000662423]
[1,1460001,1560000,0.000473204,0.000541704,0.000349773]
[1,1480001,1580000,0.000397343,0.000453415,0.00027923]
[1,1500001,1600000,0.000409318,0.000464802,0.000289753]
[1,1520001,1620000,0.000153613,0.000126792,0.00015316]
[1,1540001,1640000,0.000235464,0.000210375,0.000231499]
[1,1560001,1660000,0.000302521,0.000273738,0.000299955]
[1,1580001,1680000,0.000915343,0.000793093,0.000798267]
[1,1600001,1700000,0.00160609,0.00125534,0.00148168]
[1,1620001,1720000,0.00180453,0.00130435,0.00176201]
[1,1640001,1740000,0.00218373,0.00159411,0.00218126]
[1,1660001,1760000,0.00241352,0.00167034,0.00250504]
[1,1680001,1780000,0.00222486,0.00127536,0.00260969]
[1,1700001,1800000,0.0017484,0.000904926,0.00220575]
[1,1720001,1820000,0.00159198,0.000837083,0.00199017]
[1,1740001,1840000,0.00158703,0.000530796,0.00189749]
[1,1760001,1860000,0.0028861,0.000689947,0.00292358]
[1,1780001,1880000,0.00516598,0.00216386,0.00465834]
[1,1800001,1900000,0.00723277,0.0033854,0.00640126]
[1,1820001,1920000,0.0095324,0.00472258,0.00827663]
[1,1840001,1940000,0.0103568,0.00499164,0.00900359]
[1,1860001,1960000,0.00905242,0.00498262,0.00783984]
[1,1880001,1980000,0.00775764,0.00418424,0.00675861]
[1,1900001,2000000,0.00583395,0.00298367,0.00508543]
[1,1920001,2020000,0.00394903,0.001903,0.00370183]
[1,1940001,2040000,0.00282232,0.00166279,0.00274493]
[1,1960001,2060000,0.00344962,0.0014964,0.00378992]
[1,1980001,2080000,0.00355718,0.00171953,0.0042737]
[1,2000001,2100000,0.00378668,0.00175972,0.00471189]
[1,2020001,2120000,0.00352593,0.00158556,0.00440981]
[1,2040001,2140000,0.00371832,0.0015264,0.00471718]
[1,2060001,2160000,0.00320352,0.00142785,0.00399885]
[1,2080001,2180000,0.00202459,0.000483648,0.0027199]
[1,2100001,2200000,0.00168439,0.0003435,0.00228957]
[1,2120001,2220000,0.00205434,0.000340279,0.00284981]
[1,2140001,2240000,0.00192012,0.000328422,0.00266762]
[1,2160001,2260000,0.00234052,0.000476828,0.00292123]
[1,2180001,2280000,0.00267671,0.000594769,0.00314146]
[1,2200001,2300000,0.00319979,0.000757437,0.00354972]
[1,2220001,2320000,0.00292767,0.000879361,0.00303371]
[1,2240001,2340000,0.00295372,0.0010762,0.00296944]
[1,2260001,2360000,0.00253338,0.000997529,0.002528]
[1,2280001,2380000,0.00220663,0.00133585,0.00200944]
[1,2300001,2400000,0.0018698,0.00134265,0.00164118]
[1,2320001,2420000,0.00185984,0.00126506,0.00158694]
[1,2340001,2440000,0.00246024,0.00154268,0.00205574]
[1,2360001,2460000,0.00234367,0.00156414,0.00193482]
[1,2380001,2480000,0.00267461,0.00146409,0.0024369]
[1,2400001,2500000,0.00261709,0.00153431,0.00241616]
[1,2420001,2520000,0.00259424,0.00152868,0.00243142]
[1,2440001,2540000,0.00240695,0.00140146,0.00238557]
[1,2460001,2560000,0.00293042,0.00164847,0.00290463]
[1,2480001,2580000,0.00298628,0.00155155,0.00290593]
[1,2500001,2600000,0.00328246,0.00166086,0.00313446]
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[11,16180001,16280000,0.0007217,0.000222567,0.0009758]
[11,16200001,16300000,0.000444952,0.000188874,0.000568066]
[11,16220001,16320000,0.000184748,0.000116184,0.000208773]
[11,16240001,16340000,0.0001862,0.00018883,0.000172357]
[11,16260001,16360000,0.000164896,0.000176913,0.000149506]
[11,16280001,16380000,0.000196912,0.000160502,0.000209049]
[11,16300001,16400000,0.000446386,0.000406418,0.000460136]
[11,16320001,16420000,0.000496829,0.000458125,0.00050857]
[11,16340001,16440000,0.000428524,0.000384608,0.00044354]
[11,16360001,16460000,0.00045709,0.000428084,0.000460675]
[11,16380001,16480000,0.000471362,0.000475421,0.00045863]
[11,16400001,16500000,0.000225364,0.000234525,0.000212009]
[11,16420001,16520000,0.00039347,0.000413224,0.000371209]
[11,16440001,16540000,0.000395764,0.000414282,0.00037394]
[11,16460001,16560000,0.00035792,0.00035736,0.000351037]
[11,16480001,16580000,0.000430238,0.000495733,0.000366755]
[11,16500001,16600000,0.000511024,0.000601689,0.000429673]
[11,16520001,16620000,0.000303233,0.000377437,0.000235399]
[11,16540001,16640000,0.000292778,0.000368952,0.000224118]
[11,16560001,16660000,0.000314065,0.000396085,0.000241295]
[11,16580001,16680000,0.000163457,0.000172918,0.000152274]
[11,16600001,16700000,0.000269738,0.000251237,0.000275633]
[11,16620001,16720000,0.000365893,0.000374306,0.00035171]
[11,16640001,16740000,0.00046464,0.000510344,0.000414569]
[11,16660001,16760000,0.000487349,0.000529254,0.000440332]
[11,16680001,16780000,0.000482882,0.000528841,0.000433157]
[11,16700001,16800000,0.000278828,0.000331818,0.000227998]
[11,16720001,16820000,0.000183801,0.000212881,0.000151222]
[11,16740001,16840000,{"v":9.39228e-05,"d":"9.39E-05"},{"v":8.39792e-05,"d":"8.40E-05"},{"v":9.83977e-05,"d":"9.84E-05"}]
[11,16760001,16860000,{"v":9.04523e-05,"d":"9.05E-05"},{"v":6.99264e-05,"d":"6.99E-05"},{"v":9.817e-05,"d":"9.82E-05"}]
[11,16780001,16880000,0.000167674,0.000145587,0.000174937]
[11,16800001,16900000,0.000212842,0.000185316,0.000221823]
[11,16820001,16920000,0.000217069,0.000183237,0.00022767]
[11,16840001,16940000,0.000280166,0.000198882,0.000312245]
[11,16860001,16960000,0.000302271,0.000219998,0.000334848]
[11,16880001,16980000,0.000252494,0.000168379,0.000283285]
[11,16900001,17000000,0.00022752,0.000138888,0.000260237]
[11,16920001,17020000,0.000839782,0.000384336,0.00100261]
[11,16940001,17040000,0.00100156,0.000455543,0.00119138]
[11,16960001,17060000,0.000957894,0.000408986,0.00114869]
[11,16980001,17080000,0.000967094,0.000403144,0.00116937]
[11,17000001,17100000,0.00118743,0.000609868,0.00138971]
[11,17020001,17120000,0.00056993,0.00036878,0.000636726]
[11,17040001,17140000,0.000375543,0.000283233,0.000406408]
[11,17060001,17160000,0.000682955,0.000539224,0.000740743]
[11,17080001,17180000,0.000684978,0.000578973,0.000717345]
[11,17100001,17200000,0.000543697,0.000478058,0.000554651]
[11,17120001,17220000,0.000663781,0.000509591,0.000714376]
[11,17140001,17240000,0.00128304,0.00126638,0.00124104]
[11,17160001,17260000,0.00128963,0.00110391,0.00131711]
[11,17180001,17280000,0.00215476,0.00133199,0.00246004]
[11,17200001,17300000,0.00250317,0.00166075,0.00282454]
[11,17220001,17320000,0.00242684,0.00165327,0.00271885]
[11,17240001,17340000,0.00201984,0.0011305,0.00239575]
[11,17260001,17360000,0.00171935,0.00104045,0.00200611]
[11,17280001,17380000,0.00155737,0.001091,0.00175094]
[11,17300001,17400000,0.00171541,0.00095324,0.00203765]
[11,17320001,17420000,0.00222489,0.0010952,0.00270317]
[11,17340001,17440000,0.00285199,0.00110325,0.00358459]
[11,17360001,17460000,0.00436921,0.00164289,0.00491483]
[11,17380001,17480000,0.00413501,0.00147174,0.00444631]
[11,17400001,17500000,0.00411553,0.00139539,0.00419505]
[11,17420001,17520000,0.00388502,0.00142957,0.00373472]
[11,17440001,17540000,0.00359432,0.00156276,0.00305245]
[11,17460001,17560000,0.00265827,0.00141607,0.00217523]
[11,17480001,17580000,0.00345874,0.00210014,0.00273617]
[11,17500001,17600000,0.00405782,0.00271294,0.00316504]
[11,17520001,17620000,0.00414605,0.00278945,0.00322065]
[11,17540001,17640000,0.00356417,0.00241724,0.00276394]
[11,17560001,17660000,0.00301752,0.00208056,0.00232571]
[11,17580001,17680000,0.0017313,0.00125304,0.00133941]
[11,17600001,17700000,0.000550105,0.000414359,0.000432579]
[11,17620001,17720000,0.000512165,0.000615522,0.000372652]
[11,17640001,17740000,0.00186274,0.00237889,0.00126281]
[11,17660001,17760000,0.00237726,0.00306702,0.0015964]
[11,17680001,17780000,0.00285227,0.00366399,0.00193795]
[11,17700001,17800000,0.00406326,0.00522172,0.00276731]
[11,17720001,17820000,0.00400661,0.00514697,0.00273563]
[11,17740001,17840000,0.00317927,0.00395756,0.00233789]
[11,17760001,17860000,0.00310953,0.00377203,0.00242203]
[11,17780001,17880000,0.00359102,0.00423058,0.00297826]
[11,17800001,17900000,0.00268298,0.00299662,0.00243648]
[11,17820001,17920000,0.00256388,0.00277799,0.00241975]
[11,17840001,17940000,0.00205282,0.00221278,0.00194419]
[11,17860001,17960000,0.0016917,0.00180713,0.0016096]
[11,17880001,17980000,0.000872051,0.000885375,0.000856637]
[11,17900001,18000000,0.000589391,0.000578251,0.000588473]
[11,17920001,18020000,0.000426923,0.000428031,0.000416752]
[11,17940001,18040000,0.000426124,0.000424154,0.000418551]
[11,17960001,18060000,0.000302064,0.000287082,0.000300323]
[11,17980001,18080000,0.000152193,0.000141837,0.000146512]
[11,18000001,18100000,0.00104973,0.00106052,0.00100689]
[11,18020001,18120000,0.00100753,0.00101713,0.000967158]
[11,18040001,18140000,0.00101463,0.0010218,0.000973887]
[11,18060001,18160000,0.00101123,0.00102595,0.000968223]
[11,18080001,18180000,0.00101352,0.00102839,0.00097036]
[11,18100001,18200000,0.000326251,0.000322369,0.00031299]
[11,18120001,18220000,0.000484649,0.000486545,0.000463399]
[11,18140001,18240000,0.000534605,0.000544363,0.00050982]
[11,18160001,18260000,0.000520853,0.000522566,0.000501067]
[11,18180001,18280000,0.000535795,0.00052439,0.000519392]
[11,18200001,18300000,0.000331974,0.000315416,0.000325726]
[11,18220001,18320000,0.000197662,0.000168508,0.000196968]
[11,18240001,18340000,0.000472902,0.00044677,0.000470123]
[11,18260001,18360000,0.000513211,0.000479894,0.000510947]
[11,18280001,18380000,0.000511711,0.000483388,0.00050162]
[11,18300001,18400000,0.00049185,0.000474106,0.000474774]
[11,18320001,18420000,0.000563756,0.000562131,0.000539528]
[11,18340001,18440000,0.000388166,0.000394762,0.000356686]
[11,18360001,18460000,0.000828862,0.00083924,0.000791548]
[11,18380001,18480000,0.000918041,0.000985768,0.0008405]
[11,18400001,18500000,0.000933553,0.000993004,0.000861326]
[11,18420001,18520000,0.000865703,0.000891789,0.000816949]
[11,18440001,18540000,0.000944398,0.00095719,0.000898879]
[11,18460001,18560000,0.000468611,0.000478565,0.000428908]
[11,18480001,18580000,0.000361696,0.000315577,0.000365337]
[11,18500001,18600000,0.000358365,0.000321427,0.000358337]
[11,18520001,18620000,0.000382013,0.00032656,0.000386058]
[11,18540001,18640000,0.000164854,{"v":9.79442e-05,"d":"9.79E-05"},0.000179822]
[11,18560001,18660000,0.000195682,0.000119045,0.000214604]
[11,18580001,18680000,0.000191145,0.000118882,0.000211756]
[11,18600001,18700000,0.000179344,{"v":9.80196e-05,"d":"9.80E-05"},0.000200721]
[11,18620001,18720000,0.000142739,0.000107578,0.000141933]
[11,18640001,18740000,{"v":9.92051e-05,"d":"9.92E-05"},{"v":7.33927e-05,"d":"7.34E-05"},{"v":9.74773e-05,"d":"9.75E-05"}]
[11,18660001,18760000,0.0001153,0.00010597,0.000109524]
[11,18680001,18780000,0.000146588,0.000141509,0.000134407]
[11,18700001,18800000,0.000562831,0.000428209,0.000590326]
[11,18720001,18820000,0.000716672,0.000500847,0.000742751]
[11,18740001,18840000,0.00156331,0.00109431,0.0015009]
[11,18760001,18860000,0.00183224,0.00117783,0.00176195]
[11,18780001,18880000,0.00312034,0.00191766,0.00303467]
[11,18800001,18900000,0.00322926,0.00189498,0.00309474]
[11,18820001,18920000,0.0043457,0.00240127,0.00416375]
[11,18840001,18940000,0.0049734,0.00248188,0.00483046]
[11,18860001,18960000,0.00610349,0.00316156,0.00590527]
[11,18880001,18980000,0.00596681,0.00297663,0.0057501]
[11,18900001,19000000,0.00661213,0.00319914,0.00636778]
[11,18920001,19020000,0.00583203,0.00283053,0.00562426]
[11,18940001,19040000,0.00455039,0.00232033,0.00438537]
[11,18960001,19060000,0.00322267,0.00156846,0.00314759]
[11,18980001,19080000,0.00236276,0.00129472,0.00232794]
[11,19000001,19100000,0.0013421,0.000971697,0.00133051]
[11,19020001,19120000,0.000987496,0.000884487,0.000990179]
[11,19040001,19140000,0.000849295,0.000788739,0.000837023]
[11,19060001,19160000,0.000719929,0.000723187,0.000679018]
[11,19080001,19180000,0.000418052,0.000420366,0.000378559]
[11,19100001,19200000,0.000312667,0.0002717,0.00030283]
[11,19120001,19220000,0.000221235,0.000202596,0.000203396]
[11,19140001,19240000,0.000463434,0.000424253,0.00047038]
[11,19160001,19260000,0.000862471,0.000724856,0.000919234]
[11,19180001,19280000,0.00153874,0.00143665,0.00157085]
[11,19200001,19300000,0.00154857,0.00149719,0.001555]
[11,19220001,19320000,0.00151235,0.00144471,0.0015277]
[11,19240001,19340000,0.00126707,0.00120981,0.00127431]
[11,19260001,19360000,0.00104324,0.00107935,0.00100099]
[11,19280001,19380000,0.000358353,0.000364795,0.000340203]
[11,19300001,19400000,0.00032906,0.000319687,0.00031996]
[11,19320001,19420000,0.000308604,0.000301028,0.000300674]
[11,19340001,19440000,0.00043264,0.000435414,0.000416376]
[11,19360001,19460000,0.000274005,0.000281617,0.0002567]
[11,19380001,19480000,0.000354117,0.000366321,0.000329741]
[11,19400001,19500000,0.000616522,0.000625858,0.000591283]
[11,19420001,19520000,0.000633451,0.000648477,0.000599773]
[11,19440001,19540000,0.000480674,0.000485571,0.000458069]
[11,19460001,19560000,0.000531239,0.000533635,0.000509181]
[11,19480001,19580000,0.000554498,0.000572186,0.000523099]
[11,19500001,19600000,0.000260685,0.000281102,0.000231734]
[11,19520001,19620000,0.000302814,0.000316047,0.000283487]
[11,19540001,19640000,0.000378735,0.000377381,0.000360897]
[11,19560001,19660000,0.000349679,0.000372283,0.000310325]
[11,19580001,19680000,0.000354127,0.000370539,0.000321123]
[11,19600001,19700000,0.000725153,0.000793082,0.00064712]
[11,19620001,19720000,0.000705374,0.000776805,0.000622916]
[11,19640001,19740000,0.000713934,0.000771986,0.000640551]
[11,19660001,19760000,0.00066449,0.000700729,0.000613822]
[11,19680001,19780000,0.000533937,0.000558733,0.000493944]
[11,19700001,19800000,0.000156926,0.000130366,0.00016282]
[11,19720001,19820000,0.000110457,{"v":8.38386e-05,"d":"8.38E-05"},0.000119629]

{"sheet":"Table S9","index":8,"n_rows":230,"n_cols":5,"rows_kept":230,"flags":["formulas_cached_only"]}
["Supplementary Table 9 Chromosomal regions with significant differences in nucleotide diversity (top 5% πSS/πNS ≥ 4.44 or top 5% πNS/πSS ≥ 2.32) between Northern subpopulation (NS) and Southern subpopulation (SS)"]
["Chromosome","Bin start position (bp)","Bin end position (bp)","Ratio","Type"]
[1,2080001,2300000,{"v":6.411611030990905,"d":"6.41"},"πSS/πNS"]
[1,3280001,3400000,{"v":10.433193060517247,"d":"10.43"},"πSS/πNS"]
[1,4360001,4600000,{"v":5.546624974314921,"d":"5.55"},"πSS/πNS"]
[1,4620001,4740000,{"v":5.154700561871712,"d":"5.15"},"πSS/πNS"]
[1,4800001,5000000,{"v":5.154016879423824,"d":"5.15"},"πSS/πNS"]
[1,5620001,5740000,{"v":6.654115847649113,"d":"6.65"},"πSS/πNS"]
[1,5820001,5960000,{"v":6.220925767021073,"d":"6.22"},"πSS/πNS"]
[1,6100001,6260000,{"v":4.604807507391416,"d":"4.60"},"πSS/πNS"]
[1,6320001,6540000,{"v":7.770091492879856,"d":"7.77"},"πSS/πNS"]
[1,7080001,7180000,{"v":7.9872337303431244,"d":"7.99"},"πSS/πNS"]
[1,7980001,8180000,{"v":5.434252901463891,"d":"5.43"},"πSS/πNS"]
[1,8380001,8560000,{"v":5.545299824094517,"d":"5.55"},"πSS/πNS"]
[1,8620001,9140000,{"v":8.618187325720257,"d":"8.62"},"πSS/πNS"]
[1,11580001,11780000,{"v":4.7574397642474,"d":"4.76"},"πSS/πNS"]
[1,15300001,15420000,{"v":4.706769883605363,"d":"4.71"},"πSS/πNS"]
[1,16180001,16280000,{"v":4.552071300977737,"d":"4.55"},"πSS/πNS"]
[1,16580001,16720000,{"v":4.7359920104545425,"d":"4.74"},"πSS/πNS"]
[1,22500001,22660000,{"v":5.3801654231431115,"d":"5.38"},"πSS/πNS"]
[2,400001,580000,{"v":4.923413163699154,"d":"4.92"},"πSS/πNS"]
[2,4020001,4200000,{"v":15.474396246167768,"d":"15.47"},"πSS/πNS"]
[2,6800001,6900000,{"v":6.067899073052453,"d":"6.07"},"πSS/πNS"]
[2,8500001,8740000,{"v":6.391226894365293,"d":"6.39"},"πSS/πNS"]
[2,10420001,10540000,{"v":5.320241600109613,"d":"5.32"},"πSS/πNS"]
[2,10660001,11080000,{"v":5.61416212084955,"d":"5.61"},"πSS/πNS"]
[2,11140001,11260000,{"v":7.168709901738405,"d":"7.17"},"πSS/πNS"]
[2,11300001,11440000,{"v":5.618576866218372,"d":"5.62"},"πSS/πNS"]
[2,22660001,22820000,{"v":7.6642162870916,"d":"7.66"},"πSS/πNS"]
[4,2800001,3620000,{"v":6.7445777329246,"d":"6.74"},"πSS/πNS"]
[4,3720001,3940000,{"v":7.6341182072839215,"d":"7.63"},"πSS/πNS"]
[4,4120001,4320000,{"v":5.361112719051014,"d":"5.36"},"πSS/πNS"]
[4,7400001,7560000,{"v":5.367209538547915,"d":"5.37"},"πSS/πNS"]
[4,9080001,9520000,{"v":6.385606388379051,"d":"6.39"},"πSS/πNS"]
[4,16060001,16360000,{"v":6.598778783790799,"d":"6.60"},"πSS/πNS"]
[4,20460001,20560000,{"v":5.930668742321795,"d":"5.93"},"πSS/πNS"]
[5,320001,480000,{"v":5.018843730269737,"d":"5.02"},"πSS/πNS"]
[5,580001,760000,{"v":5.737548132227792,"d":"5.74"},"πSS/πNS"]
[5,2020001,2300000,{"v":6.4763257240976895,"d":"6.48"},"πSS/πNS"]
[5,3040001,3140000,{"v":5.030415363330125,"d":"5.03"},"πSS/πNS"]
[5,14740001,14860000,{"v":5.095233551261358,"d":"5.10"},"πSS/πNS"]
[5,15280001,15380000,{"v":4.445594253800526,"d":"4.45"},"πSS/πNS"]
[5,15640001,15800000,{"v":6.034051024049155,"d":"6.03"},"πSS/πNS"]
[5,16520001,16740000,{"v":8.333509775857085,"d":"8.33"},"πSS/πNS"]
[5,17540001,17640000,{"v":5.050820546857716,"d":"5.05"},"πSS/πNS"]
[5,18740001,18860000,{"v":5.200181368027758,"d":"5.20"},"πSS/πNS"]
[5,26780001,27000000,{"v":4.71424878749675,"d":"4.71"},"πSS/πNS"]
[5,31060001,31180000,{"v":5.226687980488331,"d":"5.23"},"πSS/πNS"]
[5,32580001,32680000,{"v":4.492286247868568,"d":"4.49"},"πSS/πNS"]
[5,33020001,33180000,{"v":4.5172049290913305,"d":"4.52"},"πSS/πNS"]
[5,33620001,33720000,{"v":4.685793516016585,"d":"4.69"},"πSS/πNS"]
[6,1500001,1800000,{"v":10.094025423230905,"d":"10.09"},"πSS/πNS"]
[6,1920001,2020000,{"v":4.537188234320955,"d":"4.54"},"πSS/πNS"]
[6,2040001,2840000,{"v":10.845583766207012,"d":"10.85"},"πSS/πNS"]
[6,4380001,4560000,{"v":5.84077245220035,"d":"5.84"},"πSS/πNS"]
[6,4580001,4860000,{"v":5.079563274690535,"d":"5.08"},"πSS/πNS"]
[6,4880001,4980000,{"v":4.652387041773231,"d":"4.65"},"πSS/πNS"]
[6,5220001,5400000,{"v":5.41239688869518,"d":"5.41"},"πSS/πNS"]
[6,8620001,8920000,{"v":6.397643406859614,"d":"6.40"},"πSS/πNS"]
[6,20300001,20400000,{"v":5.1962450838501715,"d":"5.20"},"πSS/πNS"]
[6,21820001,22100000,{"v":4.955971155268853,"d":"4.96"},"πSS/πNS"]
[6,22140001,22360000,{"v":5.338752054538436,"d":"5.34"},"πSS/πNS"]
[6,22380001,22480000,{"v":6.138765889614017,"d":"6.14"},"πSS/πNS"]
[6,25100001,25240000,{"v":6.47420553429185,"d":"6.47"},"πSS/πNS"]
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[2,5220001,5340000,{"v":2.907579405711171,"d":"2.91"},"πNS/πSS"]
[2,5940001,6260000,{"v":2.5675317934853803,"d":"2.57"},"πNS/πSS"]
[2,13180001,13380000,{"v":2.667622023032252,"d":"2.67"},"πNS/πSS"]
[2,13840001,13980000,{"v":2.483181040887518,"d":"2.48"},"πNS/πSS"]
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[4,300001,440000,{"v":2.3253772673610014,"d":"2.33"},"πNS/πSS"]
[4,620001,720000,{"v":2.4578007046915755,"d":"2.46"},"πNS/πSS"]
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[7,43840001,44220000,{"v":4.58957148951057,"d":"4.59"},"πNS/πSS"]
[7,44240001,44380000,{"v":4.45210387563952,"d":"4.45"},"πNS/πSS"]
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[7,46460001,46560000,{"v":2.568057193727043,"d":"2.57"},"πNS/πSS"]
[7,47820001,48760000,{"v":6.492079723046126,"d":"6.49"},"πNS/πSS"]
[7,48780001,48980000,{"v":3.191812962459839,"d":"3.19"},"πNS/πSS"]
[7,55240001,55500000,{"v":3.0019102627138547,"d":"3.00"},"πNS/πSS"]
[8,2000001,2460000,{"v":4.025340576956469,"d":"4.03"},"πNS/πSS"]
[8,2500001,3020000,{"v":4.033622240946301,"d":"4.03"},"πNS/πSS"]
[8,7380001,7520000,{"v":2.39195220131127,"d":"2.39"},"πNS/πSS"]
[8,7540001,7680000,{"v":2.4529691665206346,"d":"2.45"},"πNS/πSS"]
[8,7700001,7860000,{"v":2.3683377217697057,"d":"2.37"},"πNS/πSS"]
[8,25860001,26160000,{"v":4.225407539378826,"d":"4.23"},"πNS/πSS"]
[8,28780001,28980000,{"v":2.5478368672307985,"d":"2.55"},"πNS/πSS"]
[8,30540001,31700000,{"v":7.911644678902593,"d":"7.91"},"πNS/πSS"]
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[8,38020001,38200000,{"v":5.745214690261991,"d":"5.75"},"πNS/πSS"]
[8,38480001,38780000,{"v":3.6998852936319477,"d":"3.70"},"πNS/πSS"]
[9,1,320000,{"v":4.070643974226991,"d":"4.07"},"πNS/πSS"]
[9,480001,580000,{"v":2.3404342795388207,"d":"2.34"},"πNS/πSS"]
[9,740001,940000,{"v":2.671541028806931,"d":"2.67"},"πNS/πSS"]
[9,2880001,3000000,{"v":3.2982674257337288,"d":"3.30"},"πNS/πSS"]
[9,5920001,6540000,{"v":4.392945477312621,"d":"4.39"},"πNS/πSS"]
[9,6560001,6800000,{"v":3.18536173646221,"d":"3.19"},"πNS/πSS"]
[10,17220001,17400000,{"v":3.2730969384773827,"d":"3.27"},"πNS/πSS"]
[10,18000001,18100000,{"v":3.3392678245042484,"d":"3.34"},"πNS/πSS"]
[10,20160001,20500000,{"v":3.2343653813869078,"d":"3.23"},"πNS/πSS"]
[11,7240001,7500000,{"v":4.978785152032071,"d":"4.98"},"πNS/πSS"]

{"sheet":"Table S10","index":9,"n_rows":40,"n_cols":10,"rows_kept":40,"merged":[[1,0,1,4],[1,6,1,9],[6,0,9,0],[6,1,9,1],[6,2,9,2],[6,3,9,3],[6,4,9,4],[10,0,11,0],[10,1,11,1],[10,2,11,2],[10,3,11,3],[10,4,11,4],[15,0,16,0],[15,1,16,1],[15,2,16,2],[15,3,16,3],[15,4,16,4],[17,0,22,0],[17,1,22,1],[17,2,22,2],[17,3,22,3],[17,4,22,4],[33,0,34,0],[33,1,34,1],[33,2,34,2],[33,3,34,3],[33,4,34,4]],"flags":["formulas_cached_only"]}
["Supplementary table 10 Overlaps among highly differential regions and GWAS signals"]
["Divergence regions",{"$nulls":5},"GWAS peaks"]
["Chromosome","Bin start position (bp)","Bin end position (bp)","Ratio","Type",null,"Traits*","Environments","Peak SNP Position","-lg(P-value)"]
[1,7980001,8180000,{"v":5.434252901463891,"d":"5.43"},"πSS/πNS",null,"SPC","2019_EZ",8145968,{"v":7.7311095234298035,"d":"7.73"}]
[2,1260001,1480000,{"v":2.834878308216304,"d":"2.83"},"πNS/πSS",null,"DFT","2019_EZ",1404159,{"v":6.974283797448193,"d":"6.97"}]
[2,23740001,24140000,{"v":3.827915107264766,"d":"3.83"},"πNS/πSS",null,"DFT","2019_EZ",23895162,{"v":7.4441969837320565,"d":"7.44"}]
[2,24200001,24300000,{"v":2.4052735641125373,"d":"2.41"},"πNS/πSS",null,"PW","2019_LS",24230836,{"v":8.82322165181677,"d":"8.82"}]
[{"$nulls":6},"PW","2019_EZ",24282269,{"v":6.9169896444658825,"d":"6.92"}]
[{"$nulls":6},"HSW","2019_EZ",24282269,{"v":11.491980152403883,"d":"11.49"}]
[{"$nulls":6},"HSW","2019_LS",24282269,{"v":9.325802560448263,"d":"9.33"}]
[3,7660001,8320000,{"v":3.831748216564309,"d":"3.83"},"πNS/πSS",null,"DFT","2021_EZ",7866319,9.25]
[{"$nulls":6},"BN","2021_EZ",8236844,{"v":7.503416127090375,"d":"7.50"}]
[3,10080001,10260000,{"v":3.465315475442921,"d":"3.47"},"πNS/πSS",null,"DFT","2021_GC",9987335,8.43]
[3,12200001,12340000,{"v":2.5847781711749396,"d":"2.58"},"πNS/πSS",null,"PW","2019_LS",12248102,{"v":6.983644521795455,"d":"6.98"}]
[3,12480001,12620000,{"v":3.725091170926797,"d":"3.73"},"πNS/πSS",null,"HSW","2019_LS",12657588,{"v":6.534363041648706,"d":"6.53"}]
[4,16060001,16360000,{"v":6.598778783790799,"d":"6.60"},"πSS/πNS",null,"SPC","2019_EZ",16046710,{"v":7.329279559136947,"d":"7.33"}]
[{"$nulls":6},"SSC","2019_EZ",16050656,{"v":16.0635086262736,"d":"16.06"}]
[5,320001,480000,{"v":5.018843730269737,"d":"5.02"},"πSS/πNS",null,"PL","2019_EZ",463300,{"v":14.389459710213648,"d":"14.39"}]
[{"$nulls":6},"PL","2019_LS",463300,{"v":10.686159133250921,"d":"10.69"}]
[{"$nulls":6},"SP","2019_EZ",463300,{"v":15.16024820085271,"d":"15.16"}]
[{"$nulls":6},"SP","2019_LS",463300,{"v":10.421631190996003,"d":"10.42"}]
[{"$nulls":6},"PL","2021_WH",497015,{"v":6.952343977683323,"d":"6.95"}]
[null,14740001,14860000,{"v":5.095233551261358,"d":"5.10"},"πSS/πNS",null,"SP","2021_WH",497015,{"v":7.206938472785252,"d":"7.21"}]
[5,3720001,3880000,{"v":2.7558870804276454,"d":"2.76"},"πNS/πSS",null,"DFT","2019_EZ",3896838,{"v":6.617317249353512,"d":"6.62"}]
[5,3920001,4380000,{"v":3.03394814412317,"d":"3.03"},"πNS/πSS",null,"HSW","2019_EZ",3911134,{"v":7.554893574778533,"d":"7.55"}]
[5,4660001,5100000,{"v":2.8678677745403527,"d":"2.87"},"πNS/πSS",null,"SSC","2019_EZ",4997361,{"v":6.9326028944104,"d":"6.93"}]
[5,34340001,35140000,{"v":5.10632673999811,"d":"5.11"},"πNS/πSS",null,"PW","2019_EZ",34563736,{"v":17.94647519289257,"d":"17.95"}]
[6,8620001,8920000,{"v":6.397643406859614,"d":"6.40"},"πSS/πNS",null,"SSC","2019_EZ",8568351,{"v":7.081819731619845,"d":"7.08"}]
[6,17620001,17720000,{"v":2.339454240317343,"d":"2.34"},"πNS/πSS",null,"PW","2020_LS",17561030,{"v":6.636526790903005,"d":"6.64"}]
[7,3460001,3580000,{"v":6.283084183512959,"d":"6.28"},"πSS/πNS",null,"HSW","2019_EZ",3556284,{"v":6.754124009332514,"d":"6.75"}]
[7,7340001,7440000,{"v":5.500752858828796,"d":"5.50"},"πSS/πNS",null,"PW","2019_EZ",7366983,{"v":10.256266325613206,"d":"10.26"}]
[8,7700001,7860000,{"v":2.3683377217697057,"d":"2.37"},"πNS/πSS",null,"SP","2021_GC",7764308,{"v":6.646816862887806,"d":"6.65"}]
[8,28260001,28400000,{"v":5.99366952344004,"d":"5.99"},"πSS/πNS",null,"PL","2019_LS",28252659,{"v":9.55806053447031,"d":"9.56"}]
[8,31740001,32240000,{"v":3.901445980143334,"d":"3.90"},"πNS/πSS",null,"PW","2019_EZ",31739078,{"v":8.03128833655586,"d":"8.03"}]
[{"$nulls":6},"HSW","2019_EZ",31739078,{"v":6.969901239989922,"d":"6.97"}]
[8,35020001,35120000,{"v":8.524517403480697,"d":"8.52"},"πSS/πNS",null,"HSW","2019_LS",35144350,{"v":7.74225520626947,"d":"7.74"}]
[8,36840001,37180000,{"v":5.349152117669498,"d":"5.35"},"πSS/πNS",null,"HSW","2019_EZ",36827657,{"v":6.955412814731093,"d":"6.96"}]
[9,3220001,3400000,{"v":5.4830224616225385,"d":"5.48"},"πSS/πNS",null,"PW","2019_EZ",3226744,{"v":6.530743671196641,"d":"6.53"}]
[10,17220001,17400000,{"v":3.2730969384773827,"d":"3.27"},"πNS/πSS",null,"SSC","2019_EZ",17421528,{"v":9.925642223423257,"d":"9.93"}]
["* DFT, days to flowering time; PW, pod width; PL, pod length; SP, seeds per pod; HSW, 100-seed weight; BN, branch number; SPC, seed protein content; SSC, seed starch content"]

{"sheet":"Table S11","index":10,"n_rows":16674,"n_cols":4,"rows_kept":16674,"flags":["formulas_cached_only"]}
["Supplementary Table 11 Mean Fst in sliding windows between Northern subpopulation (NS) and Southern subpopulation (SS)"]
["Chromosome","Bin start position (bp)","Bin end position (bp)","Mean Fst"]
[1,1,100000,{"v":0.0709017,"d":"0.070902"}]
[1,20001,120000,{"v":0.0612057,"d":"0.061206"}]
[1,40001,140000,{"v":0.0841614,"d":"0.084161"}]
[1,60001,160000,0.125082]
[1,80001,180000,{"v":0.17508,"d":"0.175080"}]
[1,100001,200000,0.215884]
[1,120001,220000,{"v":0.0891994,"d":"0.089199"}]
[1,140001,240000,{"v":0.0824706,"d":"0.082471"}]
[1,160001,260000,{"v":0.0850898,"d":"0.085090"}]
[1,180001,280000,{"v":0.0806043,"d":"0.080604"}]
[1,200001,300000,{"v":0.0954696,"d":"0.095470"}]
[1,220001,320000,0.137159]
[1,240001,340000,0.103145]
[1,260001,360000,{"v":0.0858221,"d":"0.085822"}]
[1,280001,380000,{"v":0.0862654,"d":"0.086265"}]
[1,300001,400000,{"v":0.0659109,"d":"0.065911"}]
[1,320001,420000,0.379044]
[1,340001,440000,0.480328]
[1,360001,460000,0.498371]
[1,380001,480000,0.516095]
[1,400001,500000,0.543002]
[1,420001,520000,0.457345]
[1,440001,540000,0.409665]
[1,460001,560000,0.397391]
[1,480001,580000,0.384208]
[1,500001,600000,0.333676]
[1,520001,620000,0.238731]
[1,540001,640000,{"v":0.0452526,"d":"0.045253"}]
[1,560001,660000,{"v":0.0452865,"d":"0.045287"}]
[1,580001,680000,{"v":0.0966918,"d":"0.096692"}]
[1,600001,700000,0.124741]
[1,620001,720000,0.117574]
[1,640001,740000,0.321489]
[1,660001,760000,0.372635]
[1,680001,780000,0.502789]
[1,700001,800000,0.462845]
[1,720001,820000,0.449511]
[1,740001,840000,0.337649]
[1,760001,860000,0.246235]
[1,780001,880000,0.158416]
[1,800001,900000,{"v":0.0826499,"d":"0.082650"}]
[1,820001,920000,{"v":0.0879022,"d":"0.087902"}]
[1,840001,940000,0.058021]
[1,860001,960000,{"v":0.0695794,"d":"0.069579"}]
[1,880001,980000,{"v":0.0649505,"d":"0.064951"}]
[1,900001,1000000,{"v":0.0769988,"d":"0.076999"}]
[1,920001,1020000,0.164181]
[1,940001,1040000,0.175762]
[1,960001,1060000,0.186014]
[1,980001,1080000,0.185381]
[1,1000001,1100000,0.173457]
[1,1020001,1120000,0.178323]
[1,1040001,1140000,0.172397]
[1,1060001,1160000,{"v":0.17165,"d":"0.171650"}]
[1,1080001,1180000,0.172959]
[1,1100001,1200000,0.177668]
[1,1120001,1220000,0.146449]
[1,1140001,1240000,0.165781]
[1,1160001,1260000,0.172772]
[1,1180001,1280000,0.175787]
[1,1200001,1300000,0.193727]
[1,1220001,1320000,{"v":0.22753,"d":"0.227530"}]
[1,1240001,1340000,0.239325]
[1,1260001,1360000,0.240289]
[1,1280001,1380000,0.246995]
[1,1300001,1400000,0.250961]
[1,1320001,1420000,{"v":0.21707,"d":"0.217070"}]
[1,1340001,1440000,0.163631]
[1,1360001,1460000,0.123318]
[1,1380001,1480000,{"v":0.0300593,"d":"0.030059"}]
[1,1400001,1500000,{"v":0.0292282,"d":"0.029228"}]
[1,1420001,1520000,{"v":0.0979401,"d":"0.097940"}]
[1,1440001,1540000,0.119481]
[1,1460001,1560000,0.176678]
[1,1480001,1580000,{"v":0.21259,"d":"0.212590"}]
[1,1500001,1600000,0.208891]
[1,1520001,1620000,{"v":0.10514,"d":"0.105140"}]
[1,1540001,1640000,{"v":0.0827224,"d":"0.082722"}]
[1,1560001,1660000,{"v":0.0695867,"d":"0.069587"}]
[1,1580001,1680000,0.192095]
[1,1600001,1700000,0.192678]
[1,1620001,1720000,0.152725]
[1,1640001,1740000,0.129888]
[1,1660001,1760000,0.113725]
[1,1680001,1780000,{"v":0.0730384,"d":"0.073038"}]
[1,1700001,1800000,{"v":0.0497829,"d":"0.049783"}]
[1,1720001,1820000,{"v":0.0526409,"d":"0.052641"}]
[1,1740001,1840000,0.113617]
[1,1760001,1860000,0.275729]
[1,1780001,1880000,0.347594]
[1,1800001,1900000,0.346297]
[1,1820001,1920000,{"v":0.35121,"d":"0.351210"}]
[1,1840001,1940000,0.359928]
[1,1860001,1960000,0.318035]
[1,1880001,1980000,0.319325]
[1,1900001,2000000,0.341756]
[1,1920001,2020000,{"v":0.29402,"d":"0.294020"}]
[1,1940001,2040000,0.202759]
[1,1960001,2060000,0.194869]
[1,1980001,2080000,0.120734]
[1,2000001,2100000,{"v":0.10828,"d":"0.108280"}]
[1,2020001,2120000,0.112661]
[1,2040001,2140000,0.118459]
[1,2060001,2160000,0.114116]
[1,2080001,2180000,0.136741]
[1,2100001,2200000,0.137377]
[1,2120001,2220000,{"v":0.12774,"d":"0.127740"}]
[1,2140001,2240000,0.122609]
[1,2160001,2260000,0.184096]
[1,2180001,2280000,0.225691]
[1,2200001,2300000,0.274213]
[1,2220001,2320000,0.338421]
[1,2240001,2340000,0.346111]
[1,2260001,2360000,{"v":0.33876,"d":"0.338760"}]
[1,2280001,2380000,0.291228]
[1,2300001,2400000,0.255683]
[1,2320001,2420000,0.291412]
[1,2340001,2440000,0.326052]
[1,2360001,2460000,0.309849]
[1,2380001,2480000,0.307992]
[1,2400001,2500000,0.275017]
[1,2420001,2520000,0.262518]
[1,2440001,2540000,0.227851]
[1,2460001,2560000,0.235475]
[1,2480001,2580000,0.279028]
[1,2500001,2600000,0.309459]
[1,2520001,2620000,{"v":0.33912,"d":"0.339120"}]
[1,2540001,2640000,{"v":0.37363,"d":"0.373630"}]
[1,2560001,2660000,0.363382]
[1,2580001,2680000,0.340102]
[1,2600001,2700000,0.310292]
[1,2620001,2720000,0.286643]
[1,2640001,2740000,0.242197]
[1,2660001,2760000,0.203673]
[1,2680001,2780000,{"v":0.17284,"d":"0.172840"}]
[1,2700001,2800000,0.169942]
[1,2720001,2820000,0.219752]
[1,2740001,2840000,{"v":0.25331,"d":"0.253310"}]
[1,2760001,2860000,0.319284]
[1,2780001,2880000,0.392978]
[1,2800001,2900000,0.420389]
[1,2820001,2920000,0.435344]
[1,2840001,2940000,0.451168]
[1,2860001,2960000,0.451446]
[1,2880001,2980000,0.474756]
[1,2900001,3000000,0.421867]
[1,2920001,3020000,{"v":0.39309,"d":"0.393090"}]
[1,2940001,3040000,{"v":0.38646,"d":"0.386460"}]
[1,2960001,3060000,0.405787]
[1,2980001,3080000,0.412188]
[1,3000001,3100000,0.431014]
[1,3020001,3120000,0.423601]
[1,3040001,3140000,0.426865]
[1,3060001,3160000,0.319343]
[1,3080001,3180000,{"v":0.0569762,"d":"0.056976"}]
[1,3100001,3200000,0.104045]
[1,3120001,3220000,{"v":0.0797735,"d":"0.079774"}]
[1,3140001,3240000,0.162067]
[1,3160001,3260000,0.271094]
[1,3180001,3280000,0.197524]
[1,3200001,3300000,{"v":0.23385,"d":"0.233850"}]
[1,3220001,3320000,0.259615]
[1,3240001,3340000,0.278728]
[1,3260001,3360000,0.287787]
[1,3280001,3380000,0.341333]
[1,3300001,3400000,0.344833]
[1,3320001,3420000,0.281927]
[1,3340001,3440000,0.239537]
[1,3360001,3460000,{"v":0.18944,"d":"0.189440"}]
[1,3380001,3480000,0.146488]
[1,3400001,3500000,0.103029]
[1,3420001,3520000,{"v":0.0697466,"d":"0.069747"}]
[1,3440001,3540000,{"v":0.0484901,"d":"0.048490"}]
[1,3460001,3560000,{"v":0.0416747,"d":"0.041675"}]
[1,3480001,3580000,{"v":0.0421147,"d":"0.042115"}]
[1,3500001,3600000,{"v":0.0476347,"d":"0.047635"}]
[1,3520001,3620000,{"v":0.0531446,"d":"0.053145"}]
[1,3540001,3640000,{"v":0.0580349,"d":"0.058035"}]
[1,3560001,3660000,{"v":0.0695052,"d":"0.069505"}]
[1,3580001,3680000,{"v":0.0755999,"d":"0.075600"}]
[1,3600001,3700000,{"v":0.0922153,"d":"0.092215"}]
[1,3620001,3720000,{"v":0.0916805,"d":"0.091681"}]
[1,3640001,3740000,{"v":0.0941979,"d":"0.094198"}]
[1,3660001,3760000,0.102036]
[1,3680001,3780000,{"v":0.10345,"d":"0.103450"}]
[1,3700001,3800000,{"v":0.0882761,"d":"0.088276"}]
[1,3720001,3820000,{"v":0.0970769,"d":"0.097077"}]
[1,3740001,3840000,{"v":0.0900328,"d":"0.090033"}]
[1,3760001,3860000,{"v":0.0733459,"d":"0.073346"}]
[1,3780001,3880000,{"v":0.0989993,"d":"0.098999"}]
[1,3800001,3900000,{"v":0.0767671,"d":"0.076767"}]
[1,3820001,3920000,{"v":0.0694736,"d":"0.069474"}]
[1,3840001,3940000,{"v":0.0765395,"d":"0.076540"}]
[1,3860001,3960000,{"v":0.0745744,"d":"0.074574"}]
[1,3880001,3980000,0.048854]
[1,3900001,4000000,{"v":0.0600241,"d":"0.060024"}]
[1,3920001,4020000,{"v":0.0593608,"d":"0.059361"}]
[1,3940001,4040000,{"v":0.0470033,"d":"0.047003"}]
[1,3960001,4060000,{"v":0.0594271,"d":"0.059427"}]
[1,3980001,4080000,0.049128]
[1,4000001,4100000,{"v":0.0475922,"d":"0.047592"}]
[1,4020001,4120000,{"v":0.0407218,"d":"0.040722"}]
[1,4040001,4140000,{"v":0.0619648,"d":"0.061965"}]
[1,4060001,4160000,{"v":0.0510714,"d":"0.051071"}]
[1,4080001,4180000,{"v":0.0468238,"d":"0.046824"}]
[1,4100001,4200000,{"v":0.0486186,"d":"0.048619"}]
[1,4120001,4220000,{"v":0.0461981,"d":"0.046198"}]
[1,4140001,4240000,{"v":0.0312447,"d":"0.031245"}]
[1,4160001,4260000,{"v":0.0402313,"d":"0.040231"}]
[1,4180001,4280000,{"v":0.0349217,"d":"0.034922"}]
[1,4200001,4300000,{"v":0.0348385,"d":"0.034839"}]
[1,4220001,4320000,{"v":0.0408451,"d":"0.040845"}]
[1,4240001,4340000,{"v":0.0439303,"d":"0.043930"}]
[1,4260001,4360000,{"v":0.0369436,"d":"0.036944"}]
[1,4280001,4380000,{"v":0.0549896,"d":"0.054990"}]
[1,4300001,4400000,{"v":0.0664405,"d":"0.066441"}]
[1,4320001,4420000,{"v":0.0726326,"d":"0.072633"}]
[1,4340001,4440000,{"v":0.0792704,"d":"0.079270"}]
[1,4360001,4460000,{"v":0.0996162,"d":"0.099616"}]
[1,4380001,4480000,{"v":0.0972315,"d":"0.097232"}]
[1,4400001,4500000,0.097629]
[1,4420001,4520000,{"v":0.0984013,"d":"0.098401"}]
[1,4440001,4540000,{"v":0.0959551,"d":"0.095955"}]
[1,4460001,4560000,{"v":0.0955809,"d":"0.095581"}]
[1,4480001,4580000,0.098934]
[1,4500001,4600000,{"v":0.0967529,"d":"0.096753"}]
[1,4520001,4620000,{"v":0.0914967,"d":"0.091497"}]
[1,4540001,4640000,{"v":0.0927685,"d":"0.092769"}]
[1,4560001,4660000,{"v":0.0924162,"d":"0.092416"}]
[1,4580001,4680000,{"v":0.0904767,"d":"0.090477"}]
[1,4600001,4700000,{"v":0.0915065,"d":"0.091507"}]
[1,4620001,4720000,{"v":0.0913443,"d":"0.091344"}]
[1,4640001,4740000,{"v":0.0900726,"d":"0.090073"}]
[1,4660001,4760000,{"v":0.0855331,"d":"0.085533"}]
[1,4680001,4780000,{"v":0.0812226,"d":"0.081223"}]
[1,4700001,4800000,0.075363]
[1,4720001,4820000,{"v":0.0748241,"d":"0.074824"}]
[1,4740001,4840000,{"v":0.0752814,"d":"0.075281"}]
[1,4760001,4860000,{"v":0.0771943,"d":"0.077194"}]
[1,4780001,4880000,{"v":0.0821434,"d":"0.082143"}]
[1,4800001,4900000,0.091497]
[1,4820001,4920000,{"v":0.0927917,"d":"0.092792"}]
[1,4840001,4940000,{"v":0.0936842,"d":"0.093684"}]
[1,4860001,4960000,{"v":0.0917844,"d":"0.091784"}]
[1,4880001,4980000,{"v":0.0914556,"d":"0.091456"}]
[1,4900001,5000000,{"v":0.0914963,"d":"0.091496"}]
[1,4920001,5020000,{"v":0.0910235,"d":"0.091024"}]
[1,4940001,5040000,{"v":0.0844213,"d":"0.084421"}]
[1,4960001,5060000,0.085047]
[1,4980001,5080000,{"v":0.0762272,"d":"0.076227"}]
[1,5000001,5100000,{"v":0.0742014,"d":"0.074201"}]
[1,5020001,5120000,{"v":0.0710658,"d":"0.071066"}]
[1,5040001,5140000,0.124698]
[1,5060001,5160000,0.214094]
[1,5080001,5180000,0.267231]
[1,5100001,5200000,0.294324]
[1,5120001,5220000,0.266142]
[1,5140001,5240000,0.280819]
[1,5160001,5260000,0.248807]
[1,5180001,5280000,{"v":0.25872,"d":"0.258720"}]
[1,5200001,5300000,0.213179]
[1,5220001,5320000,0.214707]
[1,5240001,5340000,0.207639]
[1,5260001,5360000,0.227577]
[1,5280001,5380000,0.198309]
[1,5300001,5400000,0.223839]
[1,5320001,5420000,0.336734]
[1,5340001,5440000,0.405517]
[1,5360001,5460000,0.395634]
[1,5380001,5480000,0.265151]
[1,5400001,5500000,0.184697]
[1,5420001,5520000,{"v":0.0480326,"d":"0.048033"}]
[1,5440001,5540000,{"v":0.0365915,"d":"0.036592"}]
[1,5460001,5560000,{"v":0.0346092,"d":"0.034609"}]
[1,5480001,5580000,{"v":0.0363328,"d":"0.036333"}]
[1,5500001,5600000,{"v":0.0260926,"d":"0.026093"}]
[1,5520001,5620000,{"v":0.0247592,"d":"0.024759"}]
[1,5540001,5640000,{"v":0.0555302,"d":"0.055530"}]
[1,5560001,5660000,{"v":0.0914682,"d":"0.091468"}]
[1,5580001,5680000,0.129446]
[1,5600001,5700000,0.150126]
[1,5620001,5720000,0.173237]
[1,5640001,5740000,0.175883]
[1,5660001,5760000,0.153205]
[1,5680001,5780000,0.155884]
[1,5700001,5800000,0.144243]
[1,5720001,5820000,0.115327]
[1,5740001,5840000,0.103714]
[1,5760001,5860000,{"v":0.0988283,"d":"0.098828"}]
[1,5780001,5880000,{"v":0.0787884,"d":"0.078788"}]
[1,5800001,5900000,0.086831]
[1,5820001,5920000,0.101348]
[1,5840001,5940000,0.106151]
[1,5860001,5960000,0.116608]
[1,5880001,5980000,0.101183]
[1,5900001,6000000,0.075532]
[1,5920001,6020000,{"v":0.0643624,"d":"0.064362"}]
[1,5940001,6040000,{"v":0.0559496,"d":"0.055950"}]
[1,5960001,6060000,{"v":0.0413797,"d":"0.041380"}]
[1,5980001,6080000,{"v":0.0449977,"d":"0.044998"}]
[1,6000001,6100000,{"v":0.0461422,"d":"0.046142"}]
[1,6020001,6120000,{"v":0.0523383,"d":"0.052338"}]
[1,6040001,6140000,{"v":0.0594778,"d":"0.059478"}]
[1,6060001,6160000,0.067542]
[1,6080001,6180000,{"v":0.0704182,"d":"0.070418"}]
[1,6100001,6200000,{"v":0.0911103,"d":"0.091110"}]
[1,6120001,6220000,0.110975]
[1,6140001,6240000,0.110049]
[1,6160001,6260000,{"v":0.11243,"d":"0.112430"}]
[1,6180001,6280000,{"v":0.0749325,"d":"0.074933"}]
[1,6200001,6300000,0.047778]
[1,6220001,6320000,{"v":0.0359293,"d":"0.035929"}]
[1,6240001,6340000,{"v":0.0386092,"d":"0.038609"}]
[1,6260001,6360000,{"v":0.0382872,"d":"0.038287"}]
[1,6280001,6380000,{"v":0.0491268,"d":"0.049127"}]
[1,6300001,6400000,{"v":0.0721001,"d":"0.072100"}]
[1,6320001,6420000,{"v":0.0808826,"d":"0.080883"}]
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[11,15540001,15640000,{"v":0.0288748,"d":"0.028875"}]
[11,15560001,15660000,{"v":0.0314532,"d":"0.031453"}]
[11,15580001,15680000,{"v":0.0322694,"d":"0.032269"}]
[11,15600001,15700000,{"v":0.0319516,"d":"0.031952"}]
[11,15620001,15720000,{"v":0.0333493,"d":"0.033349"}]
[11,15640001,15740000,{"v":0.0538549,"d":"0.053855"}]
[11,15660001,15760000,{"v":0.0518756,"d":"0.051876"}]
[11,15680001,15780000,{"v":0.0629038,"d":"0.062904"}]
[11,15700001,15800000,{"v":0.0620791,"d":"0.062079"}]
[11,15720001,15820000,0.046377]
[11,15740001,15840000,{"v":0.0411933,"d":"0.041193"}]
[11,15760001,15860000,{"v":0.0348645,"d":"0.034865"}]
[11,15780001,15880000,0.039993]
[11,15800001,15900000,{"v":0.0436202,"d":"0.043620"}]
[11,15820001,15920000,{"v":0.0486207,"d":"0.048621"}]
[11,15840001,15940000,{"v":0.0506971,"d":"0.050697"}]
[11,15860001,15960000,{"v":0.0663931,"d":"0.066393"}]
[11,15880001,15980000,{"v":0.0484282,"d":"0.048428"}]
[11,15900001,16000000,0.030123]
[11,15920001,16020000,{"v":0.0293826,"d":"0.029383"}]
[11,15940001,16040000,{"v":0.0273625,"d":"0.027363"}]
[11,15960001,16060000,0.029067]
[11,15980001,16080000,{"v":0.0279511,"d":"0.027951"}]
[11,16000001,16100000,{"v":0.0402252,"d":"0.040225"}]
[11,16020001,16120000,0.106275]
[11,16040001,16140000,0.087511]
[11,16060001,16160000,{"v":0.0838425,"d":"0.083843"}]
[11,16080001,16180000,0.075407]
[11,16100001,16200000,0.073212]
[11,16120001,16220000,{"v":0.0653619,"d":"0.065362"}]
[11,16140001,16240000,{"v":0.0678578,"d":"0.067858"}]
[11,16160001,16260000,{"v":0.0702111,"d":"0.070211"}]
[11,16180001,16280000,{"v":0.0753526,"d":"0.075353"}]
[11,16200001,16300000,{"v":0.0785072,"d":"0.078507"}]
[11,16220001,16320000,{"v":0.0908812,"d":"0.090881"}]
[11,16240001,16340000,{"v":0.0740631,"d":"0.074063"}]
[11,16260001,16360000,0.061472]
[11,16280001,16380000,{"v":0.0580088,"d":"0.058009"}]
[11,16300001,16400000,{"v":0.0383286,"d":"0.038329"}]
[11,16320001,16420000,{"v":0.0400052,"d":"0.040005"}]
[11,16340001,16440000,{"v":0.0447267,"d":"0.044727"}]
[11,16360001,16460000,{"v":0.0517653,"d":"0.051765"}]
[11,16380001,16480000,{"v":0.0398604,"d":"0.039860"}]
[11,16400001,16500000,{"v":0.0507503,"d":"0.050750"}]
[11,16420001,16520000,0.033794]
[11,16440001,16540000,{"v":0.0340748,"d":"0.034075"}]
[11,16460001,16560000,{"v":0.0225006,"d":"0.022501"}]
[11,16480001,16580000,{"v":0.0764572,"d":"0.076457"}]
[11,16500001,16600000,{"v":0.0780721,"d":"0.078072"}]
[11,16520001,16620000,0.107036]
[11,16540001,16640000,0.110198]
[11,16560001,16660000,0.104211]
[11,16580001,16680000,{"v":0.0652512,"d":"0.065251"}]
[11,16600001,16700000,{"v":0.0295126,"d":"0.029513"}]
[11,16620001,16720000,{"v":0.0312631,"d":"0.031263"}]
[11,16640001,16740000,0.052866]
[11,16660001,16760000,{"v":0.0505585,"d":"0.050559"}]
[11,16680001,16780000,{"v":0.0511069,"d":"0.051107"}]
[11,16700001,16800000,{"v":0.0723671,"d":"0.072367"}]
[11,16720001,16820000,{"v":0.0899654,"d":"0.089965"}]
[11,16740001,16840000,{"v":0.0219559,"d":"0.021956"}]
[11,16760001,16860000,{"v":0.0515719,"d":"0.051572"}]
[11,16780001,16880000,{"v":0.0361749,"d":"0.036175"}]
[11,16800001,16900000,{"v":0.0313942,"d":"0.031394"}]
[11,16820001,16920000,{"v":0.0385786,"d":"0.038579"}]
[11,16840001,16940000,{"v":0.0604027,"d":"0.060403"}]
[11,16860001,16960000,0.056267]
[11,16880001,16980000,{"v":0.0756335,"d":"0.075634"}]
[11,16900001,17000000,0.100334]
[11,16920001,17020000,0.149669]
[11,16940001,17040000,0.159162]
[11,16960001,17060000,0.171625]
[11,16980001,17080000,0.160773]
[11,17000001,17100000,0.124437]
[11,17020001,17120000,{"v":0.0885499,"d":"0.088550"}]
[11,17040001,17140000,0.063889]
[11,17060001,17160000,{"v":0.0445151,"d":"0.044515"}]
[11,17080001,17180000,{"v":0.0507958,"d":"0.050796"}]
[11,17100001,17200000,{"v":0.0614117,"d":"0.061412"}]
[11,17120001,17220000,{"v":0.0715167,"d":"0.071517"}]
[11,17140001,17240000,{"v":0.0502338,"d":"0.050234"}]
[11,17160001,17260000,0.076066]
[11,17180001,17280000,{"v":0.0990665,"d":"0.099067"}]
[11,17200001,17300000,{"v":0.0894043,"d":"0.089404"}]
[11,17220001,17320000,{"v":0.0864731,"d":"0.086473"}]
[11,17240001,17340000,0.101034]
[11,17260001,17360000,{"v":0.0914793,"d":"0.091479"}]
[11,17280001,17380000,{"v":0.0746969,"d":"0.074697"}]
[11,17300001,17400000,{"v":0.0932552,"d":"0.093255"}]
[11,17320001,17420000,0.105659]
[11,17340001,17440000,0.128961]
[11,17360001,17460000,0.213216]
[11,17380001,17480000,0.258832]
[11,17400001,17500000,0.321877]
[11,17420001,17520000,0.365848]
[11,17440001,17540000,0.451174]
[11,17460001,17560000,0.436332]
[11,17480001,17580000,0.430216]
[11,17500001,17600000,0.410137]
[11,17520001,17620000,0.413958]
[11,17540001,17640000,0.412638]
[11,17560001,17660000,0.409868]
[11,17580001,17680000,0.378576]
[11,17600001,17700000,0.332001]
[11,17620001,17720000,0.151332]
[11,17640001,17740000,0.166693]
[11,17660001,17760000,0.169702]
[11,17680001,17780000,0.164762]
[11,17700001,17800000,0.161675]
[11,17720001,17820000,0.160765]
[11,17740001,17840000,0.124717]
[11,17760001,17860000,0.095207]
[11,17780001,17880000,{"v":0.0622297,"d":"0.062230"}]
[11,17800001,17900000,{"v":0.0191954,"d":"0.019195"}]
[11,17820001,17920000,{"v":0.00466458,"d":"0.004665"}]
[11,17840001,17940000,{"v":0.00469394,"d":"0.004694"}]
[11,17860001,17960000,{"v":0.00646385,"d":"0.006464"}]
[11,17880001,17980000,{"v":0.00728464,"d":"0.007285"}]
[11,17900001,18000000,{"v":0.0108424,"d":"0.010842"}]
[11,17920001,18020000,{"v":0.0261402,"d":"0.026140"}]
[11,17940001,18040000,{"v":0.0247017,"d":"0.024702"}]
[11,17960001,18060000,{"v":0.0440767,"d":"0.044077"}]
[11,17980001,18080000,{"v":0.0841965,"d":"0.084197"}]
[11,18000001,18100000,0.039865]
[11,18020001,18120000,{"v":0.0391762,"d":"0.039176"}]
[11,18040001,18140000,{"v":0.0407431,"d":"0.040743"}]
[11,18060001,18160000,{"v":0.0404016,"d":"0.040402"}]
[11,18080001,18180000,{"v":0.0405954,"d":"0.040595"}]
[11,18100001,18200000,{"v":0.0611103,"d":"0.061110"}]
[11,18120001,18220000,{"v":0.0534777,"d":"0.053478"}]
[11,18140001,18240000,{"v":0.0468676,"d":"0.046868"}]
[11,18160001,18260000,{"v":0.0445324,"d":"0.044532"}]
[11,18180001,18280000,{"v":0.0469309,"d":"0.046931"}]
[11,18200001,18300000,{"v":0.0466627,"d":"0.046663"}]
[11,18220001,18320000,{"v":0.0684286,"d":"0.068429"}]
[11,18240001,18340000,0.031408]
[11,18260001,18360000,{"v":0.0339553,"d":"0.033955"}]
[11,18280001,18380000,{"v":0.0398172,"d":"0.039817"}]
[11,18300001,18400000,{"v":0.0415343,"d":"0.041534"}]
[11,18320001,18420000,{"v":0.0345249,"d":"0.034525"}]
[11,18340001,18440000,{"v":0.0575829,"d":"0.057583"}]
[11,18360001,18460000,{"v":0.0411503,"d":"0.041150"}]
[11,18380001,18480000,{"v":0.0484899,"d":"0.048490"}]
[11,18400001,18500000,{"v":0.0467191,"d":"0.046719"}]
[11,18420001,18520000,{"v":0.0483988,"d":"0.048399"}]
[11,18440001,18540000,0.047998]
[11,18460001,18560000,{"v":0.0677267,"d":"0.067727"}]
[11,18480001,18580000,{"v":0.0545525,"d":"0.054553"}]
[11,18500001,18600000,{"v":0.0522702,"d":"0.052270"}]
[11,18520001,18620000,{"v":0.0663088,"d":"0.066309"}]
[11,18540001,18640000,{"v":0.11687,"d":"0.116870"}]
[11,18560001,18660000,0.102477]
[11,18580001,18680000,{"v":0.0929721,"d":"0.092972"}]
[11,18600001,18700000,0.115266]
[11,18620001,18720000,0.102084]
[11,18640001,18740000,0.108677]
[11,18660001,18760000,{"v":0.0926332,"d":"0.092633"}]
[11,18680001,18780000,{"v":0.0872222,"d":"0.087222"}]
[11,18700001,18800000,0.102726]
[11,18720001,18820000,0.135533]
[11,18740001,18840000,0.203198]
[11,18760001,18860000,0.236423]
[11,18780001,18880000,0.231913]
[11,18800001,18900000,0.264747]
[11,18820001,18920000,0.290793]
[11,18840001,18940000,0.311698]
[11,18860001,18960000,0.305345]
[11,18880001,18980000,0.330398]
[11,18900001,19000000,0.344589]
[11,18920001,19020000,0.340831]
[11,18940001,19040000,0.320369]
[11,18960001,19060000,0.307554]
[11,18980001,19080000,0.267466]
[11,19000001,19100000,0.144069]
[11,19020001,19120000,{"v":0.0553917,"d":"0.055392"}]
[11,19040001,19140000,{"v":0.0614494,"d":"0.061449"}]
[11,19060001,19160000,0.061816]
[11,19080001,19180000,{"v":0.0850117,"d":"0.085012"}]
[11,19100001,19200000,0.106605]
[11,19120001,19220000,0.118244]
[11,19140001,19240000,{"v":0.0397723,"d":"0.039772"}]
[11,19160001,19260000,{"v":0.0393984,"d":"0.039398"}]
[11,19180001,19280000,{"v":0.0293519,"d":"0.029352"}]
[11,19200001,19300000,{"v":0.0264747,"d":"0.026475"}]
[11,19220001,19320000,{"v":0.0272243,"d":"0.027224"}]
[11,19240001,19340000,{"v":0.0326779,"d":"0.032678"}]
[11,19260001,19360000,{"v":0.0286667,"d":"0.028667"}]
[11,19280001,19380000,{"v":0.0426558,"d":"0.042656"}]
[11,19300001,19400000,0.042906]
[11,19320001,19420000,{"v":0.0402569,"d":"0.040257"}]
[11,19340001,19440000,{"v":0.0400418,"d":"0.040042"}]
[11,19360001,19460000,{"v":0.0465485,"d":"0.046549"}]
[11,19380001,19480000,{"v":0.0456569,"d":"0.045657"}]
[11,19400001,19500000,{"v":0.0370187,"d":"0.037019"}]
[11,19420001,19520000,{"v":0.0422399,"d":"0.042240"}]
[11,19440001,19540000,{"v":0.0416553,"d":"0.041655"}]
[11,19460001,19560000,{"v":0.0402943,"d":"0.040294"}]
[11,19480001,19580000,0.040497]
[11,19500001,19600000,{"v":0.0550773,"d":"0.055077"}]
[11,19520001,19620000,{"v":0.0387084,"d":"0.038708"}]
[11,19540001,19640000,{"v":0.0469869,"d":"0.046987"}]
[11,19560001,19660000,{"v":0.0704229,"d":"0.070423"}]
[11,19580001,19680000,{"v":0.0610675,"d":"0.061068"}]
[11,19600001,19700000,{"v":0.0454629,"d":"0.045463"}]
[11,19620001,19720000,{"v":0.0489983,"d":"0.048998"}]
[11,19640001,19740000,{"v":0.0483155,"d":"0.048316"}]
[11,19660001,19760000,{"v":0.0380167,"d":"0.038017"}]
[11,19680001,19780000,{"v":0.0416677,"d":"0.041668"}]
[11,19700001,19800000,{"v":0.0667113,"d":"0.066711"}]
[11,19720001,19820000,{"v":0.0613471,"d":"0.061347"}]

{"sheet":"Table S12","index":11,"n_rows":836,"n_cols":5,"rows_kept":836,"flags":["formulas_cached_only"]}
[null,"Supplementary Table 12 One hundred and two highly differentiated loci with Fst values >0.44 (5% threshold) across the whole genome"]
[1,"Chromosome","Bin start position (bp)","Bin end position (bp)","Mean Fst"]
[19,1,340001,520000,{"v":0.4990282,"d":"0.499028"}]
[20,1,680001,820000,{"v":0.47171500000000005,"d":"0.471715"}]
[21,1,2840001,2980000,{"v":0.4591233333333333,"d":"0.459123"}]
[22,1,9660001,9800000,{"v":0.5156616666666667,"d":"0.515662"}]
[23,1,12380001,12580000,{"v":0.5220928333333333,"d":"0.522093"}]
[36,1,12820001,13280000,{"v":0.5263819444444444,"d":"0.526382"}]
[37,1,20760001,20880000,{"v":0.4543475,"d":"0.454348"}]
[38,2,4300001,4480000,{"v":0.5168052,"d":"0.516805"}]
[144,2,5000001,5100000,0.469559]
[145,2,16280001,17080000,{"v":0.5739204444444443,"d":"0.573920"}]
[146,2,18680001,18860000,{"v":0.49790159999999994,"d":"0.497902"}]
[485,2,20700001,20880000,{"v":0.5411071999999999,"d":"0.541107"}]
[486,2,20940001,21440000,{"v":0.5430832352941175,"d":"0.543083"}]
[487,3,1280001,1540000,{"v":0.5381186666666666,"d":"0.538119"}]
[621,3,2640001,3240000,{"v":0.5209749,"d":"0.520975"}]
[622,3,3360001,3460000,0.465994]
[623,3,3640001,3860000,{"v":0.5239427142857143,"d":"0.523943"}]
[624,3,3900001,4560000,{"v":0.6635624482758622,"d":"0.663562"}]
[625,3,4660001,5140000,{"v":0.4916223529411765,"d":"0.491622"}]
[626,3,5220001,5480000,{"v":0.46308511111111117,"d":"0.463085"}]
[643,3,5560001,6220000,{"v":0.5204235517241379,"d":"0.520424"}]
[644,3,6920001,8320000,{"v":0.6195556363636365,"d":"0.619556"}]
[645,3,8780001,9220000,{"v":0.5219222222222223,"d":"0.521922"}]
[646,3,9680001,9960000,{"v":0.4895685714285714,"d":"0.489569"}]
[647,3,11040001,11260000,{"v":0.4859341428571428,"d":"0.485934"}]
[648,3,11480001,11780000,{"v":0.4721361818181818,"d":"0.472136"}]
[649,4,3420001,3640000,{"v":0.5012939999999999,"d":"0.501294"}]
[650,4,3720001,4320000,{"v":0.5644859545454547,"d":"0.564486"}]
[651,4,5200001,5500000,{"v":0.5299172727272727,"d":"0.529917"}]
[652,4,5600001,6120000,{"v":0.6360886818181819,"d":"0.636089"}]
[653,4,6180001,6420000,{"v":0.537897625,"d":"0.537898"}]
[654,4,7360001,7460000,{"v":0.5761084000000001,"d":"0.576108"}]
[655,4,7700001,7880000,{"v":0.5346786,"d":"0.534679"}]
[656,4,8020001,8200000,0.541029]
[657,4,8500001,8640000,{"v":0.48049800000000004,"d":"0.480498"}]
[658,4,8660001,9000000,{"v":0.4604282857142858,"d":"0.460428"}]
[659,5,1100001,1360000,{"v":0.46216,"d":"0.462160"}]
[661,5,1220001,1320000,{"v":0.4550436666666666,"d":"0.455044"}]
[1040,5,5600001,5740000,{"v":0.48272266666666663,"d":"0.482723"}]
[1041,5,25160001,25460000,{"v":0.5435455454545455,"d":"0.543546"}]
[2043,5,30960001,31060000,0.451156]
[2044,5,31160001,31420000,{"v":0.6861124444444444,"d":"0.686112"}]
[2045,6,1560001,1700000,{"v":0.47755300000000006,"d":"0.477553"}]
[2046,6,4840001,4980000,{"v":0.4518336666666667,"d":"0.451834"}]
[2047,6,6500001,6620000,0.455665]
[2078,6,18080001,18280000,{"v":0.4749993333333334,"d":"0.474999"}]
[2642,6,22720001,22820000,0.444685]
[2643,6,23440001,23640000,{"v":0.5140506666666667,"d":"0.514051"}]
[2644,6,23920001,24020000,0.461366]
[2645,6,33840001,34060000,{"v":0.4701281428571429,"d":"0.470128"}]
[2646,6,34360001,34500000,{"v":0.48433866666666664,"d":"0.484339"}]
[2647,7,4020001,4160000,{"v":0.4996966666666666,"d":"0.499697"}]
[2648,7,8660001,8760000,0.454222]
[2649,7,12220001,12380000,0.478285]
[2650,7,15000001,15160000,{"v":0.5230765,"d":"0.523077"}]
[2651,7,28620001,28920000,{"v":0.5352734545454546,"d":"0.535273"}]
[2652,7,28980001,29120000,0.469806]
[2653,7,30120001,30460000,{"v":0.5661130769230769,"d":"0.566113"}]
[2654,7,31560001,31900000,{"v":0.47482038461538456,"d":"0.474820"}]
[2655,7,34440001,34540000,0.469916]
[2656,7,35940001,36060000,{"v":0.5116425,"d":"0.511643"}]
[2657,7,36080001,36380000,{"v":0.5926410909090909,"d":"0.592641"}]
[2658,7,36440001,36660000,{"v":0.5347644285714287,"d":"0.534764"}]
[2659,7,37000001,37160000,{"v":0.51862775,"d":"0.518628"}]
[2660,7,44240001,44360000,{"v":0.4544015,"d":"0.454402"}]
[2661,7,45200001,45480000,{"v":0.5126915555555556,"d":"0.512692"}]
[2662,7,45780001,45940000,{"v":0.47407825,"d":"0.474078"}]
[2663,7,46780001,47000000,{"v":0.4744255714285714,"d":"0.474426"}]
[2664,7,51060001,51180000,0.485545]
[2665,8,2300001,2460000,{"v":0.45544,"d":"0.455440"}]
[2666,8,2500001,3140000,{"v":0.5334684166666666,"d":"0.533468"}]
[2667,8,30780001,30920000,0.450595]
[2668,8,31120001,31300000,{"v":0.4561968,"d":"0.456197"}]
[2669,8,41420001,41540000,0.450665]
[2670,8,45100001,45280000,{"v":0.5042098,"d":"0.504210"}]
[2671,9,1,160000,0.584226]
[2672,9,200001,320000,0.475068]
[2673,9,460001,600000,{"v":0.5207463333333333,"d":"0.520746"}]
[2674,9,700001,1100000,{"v":0.5614048125000001,"d":"0.561405"}]
[2675,9,5040001,5160000,{"v":0.4522175,"d":"0.452218"}]
[2676,9,5940001,6540000,{"v":0.5611559230769232,"d":"0.561156"}]
[2677,9,6600001,6780000,0.498956]
[2762,9,8780001,8920000,{"v":0.46037666666666666,"d":"0.460377"}]
[2763,9,16060001,16340000,{"v":0.46131469999999997,"d":"0.461315"}]
[2764,9,16400001,16560000,{"v":0.46064025000000003,"d":"0.460640"}]
[2765,9,17120001,17320000,0.536192]
[2766,9,17380001,17500000,{"v":0.5136225,"d":"0.513623"}]
[2863,9,18360001,19100000,{"v":0.5883344545454546,"d":"0.588334"}]
[2864,10,12880001,12980000,0.490009]
[2865,10,13780001,13880000,0.491908]
[2866,10,13920001,14020000,0.454746]
[2867,10,18880001,19400000,{"v":0.5376872727272728,"d":"0.537687"}]
[2875,10,19620001,19780000,0.475907]
[2876,10,20180001,20380000,{"v":0.5125678333333333,"d":"0.512568"}]
[2877,10,20400001,20500000,0.445065]
[2878,11,1180001,1320000,{"v":0.49943066666666663,"d":"0.499431"}]
[2879,11,1800001,2000000,0.500338]
[2880,11,2300001,2500000,{"v":0.5163829999999999,"d":"0.516383"}]
[2881,11,2720001,3160000,{"v":0.5621987222222223,"d":"0.562199"}]
[2882,11,3180001,3420000,{"v":0.48886466666666667,"d":"0.488865"}]
[2883,11,5020001,5180000,{"v":0.48843625,"d":"0.488436"}]
[2884,11,17440001,17540000,0.451174]
[2886]
[2887]
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[3161]
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[6054]
[6334]
[6344]
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[6346]
[6347]
[6348]
[6349]
[6350]
[6351]
[6352]
[6724]
[6725]
[6726]
[6888]
[6889]
[6890]
[6971]
[6972]
[7550]
[7551]
[7552]
[7553]
[7554]
[7555]
[7782]
[7818]
[7819]
[7820]
[7821]
[7822]
[7823]
[7842]
[8338]
[8339]
[8340]
[8341]
[8342]
[8343]
[8344]
[8364]
[8365]
[8366]
[8719]
[8720]
[8721]
[8951]
[9129]
[9132]
[9268]
[9269]
[9270]
[9271]
[9949]
[9950]
[9951]
[9952]
[9953]
[9954]
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[9967]
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[10240]
[10315]
[10316]
[10322]
[10323]
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[10325]
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[10329]
[10330]
[10331]
[10332]
[10340]
[10341]
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[10345]
[10346]
[10368]
[10369]
[10370]
[10371]
[10730]
[10731]
[10778]
[10779]
[10780]
[10781]
[10782]
[10784]
[10785]
[10786]
[10787]
[10807]
[10808]
[10809]
[10810]
[10857]
[10858]
[10859]
[10860]
[10861]
[10862]
[10863]
[11071]
[11072]
[11414]
[11417]
[11424]
[11425]
[11426]
[11427]
[11428]
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[11435]
[11440]
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[11445]
[11446]
[11447]
[11448]
[11449]
[11450]
[11451]
[12838]
[12839]
[12840]
[12855]
[12856]
[12857]
[12858]
[12859]
[13370]
[13371]
[13554]
[13555]
[13556]
[13557]
[13558]
[13586]
[13587]
[13588]
[13589]
[13596]
[13597]
[13609]
[13610]
[13611]
[13621]
[13622]
[13623]
[13624]
[13625]
[13626]
[13627]
[13628]
[13629]
[13630]
[13631]
[13632]
[13633]
[13634]
[13635]
[13636]
[13838]
[13839]
[13883]
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[13885]
[13886]
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[13890]
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[13895]
[13896]
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[13898]
[13899]
[13900]
[13901]
[13902]
[13903]
[13904]
[13905]
[13906]
[13907]
[13908]
[13916]
[13917]
[13918]
[13919]
[13920]
[14025]
[14026]
[14027]
[14389]
[14390]
[14391]
[14392]
[14393]
[14394]
[14395]
[14396]
[14397]
[14398]
[14406]
[14407]
[14408]
[14409]
[14442]
[14443]
[14444]
[14445]
[14446]
[14447]
[14455]
[14456]
[14504]
[14505]
[14506]
[14507]
[14508]
[14509]
[14510]
[14511]
[14512]
[14513]
[14514]
[14515]
[14516]
[14517]
[14518]
[14519]
[14520]
[14521]
[14522]
[14523]
[14524]
[14525]
[14526]
[14527]
[14528]
[14529]
[14530]
[14531]
[14532]
[14533]
[14534]
[14535]
[14536]
[15281]
[15326]
[15333]
[15581]
[15582]
[15583]
[15584]
[15585]
[15586]
[15587]
[15588]
[15589]
[15590]
[15591]
[15592]
[15593]
[15594]
[15595]
[15596]
[15597]
[15598]
[15599]
[15600]
[15601]
[15602]
[15618]
[15619]
[15620]
[15621]
[15646]
[15647]
[15648]
[15649]
[15650]
[15651]
[15657]
[15746]
[15747]
[15748]
[15777]
[15778]
[15779]
[15780]
[15781]
[15782]
[15802]
[15803]
[15804]
[15805]
[15806]
[15807]
[15823]
[15824]
[15825]
[15826]
[15827]
[15828]
[15829]
[15830]
[15831]
[15832]
[15833]
[15834]
[15835]
[15836]
[15837]
[15838]
[15839]
[15840]
[15846]
[15847]
[15848]
[15849]
[15850]
[15853]
[15938]
[15939]
[15940]
[15941]
[16559]

{"sheet":"Table S13 ","index":12,"n_rows":579,"n_cols":8,"rows_kept":579,"merged":[[3,0,5,0],[6,0,30,0],[31,0,36,0],[37,0,52,0],[53,0,72,0],[73,0,90,0],[91,0,158,0],[159,0,199,0],[200,0,212,0],[213,0,226,0],[227,0,238,0],[239,0,249,0],[250,0,256,0],[258,0,260,0],[261,0,276,0],[277,0,283,0],[284,0,294,0],[295,0,316,0],[317,0,324,0],[325,0,347,0],[348,0,350,0],[351,0,362,0],[363,0,378,0],[379,0,392,0],[393,0,415,0],[416,0,444,0],[445,0,463,0],[464,0,476,0],[477,0,487,0],[488,0,507,0],[508,0,538,0],[539,0,548,0],[549,0,565,0],[566,0,578,0]],"flags":["formulas_cached_only"]}
["Supplementary Table 13 Putative regions and genes causing population differentiation between Northern subpopulation (NS) and Southern subpopulation (SS)"]
["Region","Gene ID","Start (bp)","End (bp)","Protein names","Biological process (GO)","Ccellular component (GO)","Molecular function (GO)"]
["Chr1:680001-700000","Vradi01g00400",659474,688240,"nuclear pore complex protein GP210 isoform X2","-","integral component of membrane [GO:0016021]","-"]
["Chr2:18740001-18860000","Vradi02g10750",18741740,18753339,"anaphase-promoting complex subunit 6 isoform X1","-","-","-"]
[null,"Vradi02g10760",18769498,18770574,"-","-","-","-"]
[null,"Vradi02g10770",18809900,18811863,"protein GRAVITROPIC IN THE LIGHT 1 isoform X1","negative gravitropism [GO:0009959]; response to red or far red light [GO:0009639]","-","response to red or far red light [GO:0009639]"]
["Chr3:2760001-3240000","Vradi03g02130",2767141,2767452,"-","-","-","-"]
[null,"Vradi03g02140",2770045,2773214,"Adenylosuccinate synthetase, chloroplastic (AMPSase) (AdSS) (EC 6.3.4.4) (IMP--aspartate ligase)","'de novo' AMP biosynthetic process [GO:0044208]","chloroplast [GO:0009507]","adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]"]
[null,"Vradi03g02150",2778526,2785423,"DNA-binding protein SMUBP-2 isoform X2","-","spliceosomal complex [GO:0005681]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; helicase activity [GO:0004386]"]
[null,"Vradi03g02160",2788057,2788563,"-","-","-","-"]
[null,"Vradi03g02170",2798817,2814791,"uncharacterized protein LOC106757598 isoform X2","-","-","-"]
[null,"Vradi03g02180",2812282,2814843,"putative pentatricopeptide repeat-containing protein At5g52630","-","-","zinc ion binding [GO:0008270]"]
[null,"Vradi03g02190",2821074,2832763,"Guanylate kinase (EC 2.7.4.8)","-","-","ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]"]
[null,"Vradi03g02200",2837323,2837724,"-","-","-","-"]
[null,"Vradi03g02210",2861503,2862572,"uncharacterized protein LOC106761054","recombinational repair [GO:0000725]","-","-"]
[null,"Vradi03g02220",2894384,2896317,"remorin 4.1-like","-","-","-"]
[null,"Vradi03g02230",2909748,2913812,"calcium-dependent protein kinase 32","-","-","ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; protein kinase activity [GO:0004672]"]
[null,"Vradi03g02240",2946171,2948065,"-","-","-","-"]
[null,"Vradi03g02250",2966376,2971683,"-","-","-","-"]
[null,"Vradi03g02260",2983429,2987348,"polygalacturonase","carbohydrate metabolic process [GO:0005975]","cell wall [GO:0005618]; integral component of membrane [GO:0016021]","polygalacturonase activity [GO:0004650]"]
[null,"Vradi03g02270",2991547,2993376,"zinc finger AN1 and C2H2 domain-containing stress-associated protein 16","-","nucleus [GO:0005634]","zinc ion binding [GO:0008270]"]
[null,"Vradi03g02280",2994830,3003247,"uncharacterized protein LOC106757159","-","-","-"]
[null,"Vradi03g02290",3023389,3027391,"leucine-rich repeat receptor-like tyrosine-protein kinase PXC3","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi03g02300",3067961,3095147,"insulin-degrading enzyme-like 1, peroxisomal","-","-","metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]"]
[null,"Vradi03g02310",3098958,3099908,"-","-","-","-"]
[null,"Vradi03g02320",3103252,3106312,"putative disease resistance protein RGA3","-","-","-"]
[null,"Vradi03g02330",3129076,3135037,"Magnesium chelatase (EC 6.6.1.1)","chlorophyll biosynthetic process [GO:0015995]; photosynthesis [GO:0015979]","-","ATP binding [GO:0005524]; magnesium chelatase activity [GO:0016851]"]
[null,"Vradi03g02340",3141863,3146464,"Cytoplasmic tRNA 2-thiolation protein 2","protein urmylation [GO:0032447]; tRNA thio-modification [GO:0034227]; tRNA wobble uridine modification [GO:0002098]","cytoplasm [GO:0005737]","nucleotidyltransferase activity [GO:0016779]; tRNA binding [GO:0000049]"]
[null,"Vradi03g02350",3160581,3166302,"tRNA-uridine aminocarboxypropyltransferase (EC 2.5.1.25)","tRNA processing [GO:0008033]","-","tRNA-uridine aminocarboxypropyltransferase activity [GO:0016432]"]
[null,"Vradi03g02360",3177835,3188597,"villin-3","actin filament capping [GO:0051693]; cytoskeleton organization [GO:0007010]","-","actin filament binding [GO:0051015]"]
[null,"Vradi03g02370",3229361,3236234,"pentatricopeptide repeat-containing protein At2g41720 isoform X2","-","-","-"]
["Chr3:3360001-3460000","Vradi03g02430",3359173,3364896,"ABC transporter G family member 15-like isoform X1","-","integral component of membrane [GO:0016021]","ATPase-coupled transmembrane transporter activity [GO:0042626]; ATP binding [GO:0005524]"]
[null,"Vradi03g02440",3377135,3386878,"short integuments 2, mitochondrial","-","-","GTP binding [GO:0005525]"]
[null,"Vradi03g02450",3394069,3401740,"kinesin-like protein KIN-14L isoform X2","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]"]
[null,"Vradi03g02460",3403436,3406011,"uncharacterized protein LOC106757715","-","Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi03g02470",3425553,3428958,"DET1- and DDB1-associated protein 1","regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032434]","-","-"]
[null,"Vradi03g02480",3439293,3442406,"transcription initiation factor IIB-2","transcription preinitiation complex assembly [GO:0070897]","-","metal ion binding [GO:0046872]; TBP-class protein binding [GO:0017025]; translation initiation factor activity [GO:0003743]"]
["Chr3:3960001-4200000","Vradi03g02820",3973731,3977933,"transcription factor PIF1 isoform X3","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]"]
[null,"Vradi03g02830",3979734,3981886,"ankyrin repeat-containing protein ITN1-like","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g02840",3984931,3989194,"26S proteasome regulatory subunit 4 homolog A","protein catabolic process [GO:0030163]","cytoplasm [GO:0005737]; proteasome complex [GO:0000502]","ATP binding [GO:0005524]; proteasome-activating ATPase activity [GO:0036402]"]
[null,"Vradi03g02850",4027314,4033192,"uncharacterized protein LOC106756905","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g02860",4051396,4055794,"-","-","-","-"]
[null,"Vradi03g02870",4061471,4066610,"probable ADP-ribosylation factor GTPase-activating protein AGD6","-","-","GTPase activator activity [GO:0005096]"]
[null,"Vradi03g02880",4083548,4086594,"short-chain dehydrogenase TIC 32, chloroplastic","-","-","-"]
[null,"Vradi03g02890",4088340,4092992,"UNC93-like protein 3","potassium ion homeostasis [GO:0055075]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-"]
[null,"Vradi03g02900",4094735,4101106,"Eukaryotic translation initiation factor 3 subunit A (eIF3a) (Eukaryotic translation initiation factor 3 subunit 10)","formation of cytoplasmic translation initiation complex [GO:0001732]","eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]","translation initiation factor activity [GO:0003743]"]
[null,"Vradi03g02910",4105426,4111239,"organelle RRM domain-containing protein 2, mitochondrial isoform X2","-","-","RNA binding [GO:0003723]"]
[null,"Vradi03g02920",4126222,4129855,"uncharacterized protein LOC106757814","-","-","-"]
[null,"Vradi03g02930",4136755,4137420,"uncharacterized protein LOC106757126 isoform X1","-","-","-"]
[null,"Vradi03g02940",4140267,4144460,"Inorganic diphosphatase (EC 3.6.1.1)","phosphate-containing compound metabolic process [GO:0006796]","cytoplasm [GO:0005737]","inorganic diphosphatase activity [GO:0004427]; magnesium ion binding [GO:0000287]"]
[null,"Vradi03g02950",4165693,4168429,"WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi03g02960",4185445,4187920,"-","-","-","-"]
[null,"Vradi03g02970",4189852,4193782,"-","-","-","-"]
["Chr3:7120001-7280000","Vradi03g05590",7121297,7122981,"zerumbone synthase","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi03g05600",7123811,7124971,"uncharacterized protein LOC106757326","-","-","-"]
[null,"Vradi03g05610",7125486,7133596,"Auxin response factor","auxin-activated signaling pathway [GO:0009734]; regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi03g05620",7156701,7161575,"-","-","-","-"]
[null,"Vradi03g05630",7166123,7168155,"protein NETWORKED 3C","-","-","actin binding [GO:0003779]"]
[null,"Vradi03g05640",7183663,7187571,"protein TRANSPORT INHIBITOR RESPONSE 1-like","auxin-activated signaling pathway [GO:0009734]; protein ubiquitination [GO:0016567]","-","-"]
[null,"Vradi03g05650",7194383,7196815,"stress response protein nst1","-","-","-"]
[null,"Vradi03g05660",7200624,7201537,"CASP-like protein","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-"]
[null,"Vradi03g05670",7206384,7210968,"zinc finger protein CONSTANS-LIKE 13","-","nucleus [GO:0005634]","zinc ion binding [GO:0008270]"]
[null,"Vradi03g05680",7219161,7220878,"glutaredoxin-C13","-","cytoplasm [GO:0005737]","protein disulfide oxidoreductase activity [GO:0015035]"]
[null,"Vradi03g05690",7221698,7222006,"glutaredoxin-C11","-","cytoplasm [GO:0005737]","protein disulfide oxidoreductase activity [GO:0015035]"]
[null,"Vradi03g05700",7228123,7230914,"OTU domain-containing protein 6B","-","-","-"]
[null,"Vradi03g05710",7233913,7234221,"monothiol glutaredoxin-S6","-","cytoplasm [GO:0005737]","protein disulfide oxidoreductase activity [GO:0015035]"]
[null,"Vradi03g05720",7241246,7241551,"monothiol glutaredoxin-S6","-","cytoplasm [GO:0005737]","protein disulfide oxidoreductase activity [GO:0015035]"]
[null,"Vradi03g05730",7244871,7245246,"uncharacterized protein LOC106757476","-","-","-"]
[null,"Vradi03g05740",7246642,7250375,"BTB/POZ domain-containing protein At1g03010","protein ubiquitination [GO:0016567]","-","-"]
[null,"Vradi03g05750",7255634,7260640,"peptide chain release factor APG3, chloroplastic","chloroplast organization [GO:0009658]; plastid translation [GO:0032544]; thylakoid membrane organization [GO:0010027]","chloroplast [GO:0009507]","translation release factor activity, codon specific [GO:0016149]"]
[null,"Vradi03g05760",7261571,7268139,"spermatogenesis-associated protein 20 isoform X1","carbohydrate metabolic process [GO:0005975]","-","-"]
[null,"Vradi03g05770",7269428,7272037,"-","-","-","-"]
[null,"Vradi03g05780",7271712,7278647,"peroxisome biogenesis protein 6 isoform X1","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]"]
["Chr3:7340001-7460000","Vradi03g05840",7352110,7353563,"BTB/POZ and MATH domain-containing protein 3 isoform X1","-","-","-"]
[null,"Vradi03g05850",7354788,7358469,"autophagy-related protein 18a","-","-","-"]
[null,"Vradi03g05860",7360007,7361446,"pentatricopeptide repeat-containing protein At5g43790","-","-","-"]
[null,"Vradi03g05870",7361891,7363123,"dephospho-CoA kinase","coenzyme A biosynthetic process [GO:0015937]","-","ATP binding [GO:0005524]; dephospho-CoA kinase activity [GO:0004140]"]
[null,"Vradi03g05880",7367949,7369563,"heavy metal-associated isoprenylated plant protein 36","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi03g05890",7373550,7373978,"-","-","-","-"]
[null,"Vradi03g05900",7377097,7380146,"ankyrin repeat-containing protein At5g02620-like","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g05910",7381422,7381631,"-","-","-","-"]
[null,"Vradi03g05920",7383271,7386044,"Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)","one-carbon metabolic process [GO:0006730]","-","methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]"]
[null,"Vradi03g05930",7389087,7393694,"protein LOW PSII ACCUMULATION 1, chloroplastic isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g05940",7395851,7396195,"rapid alkalinization factor","-","extracellular region [GO:0005576]","-"]
[null,"Vradi03g05950",7400022,7404881,"dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","mannosyltransferase activity [GO:0000030]"]
[null,"Vradi03g05960",7405954,7406523,"translocator protein homolog","porphyrin-containing compound metabolic process [GO:0006778]; response to abscisic acid [GO:0009737]; response to salt stress [GO:0009651]","endoplasmic reticulum [GO:0005783]; Golgi stack [GO:0005795]; integral component of membrane [GO:0016021]","heme binding [GO:0020037]"]
[null,"Vradi03g05970",7408757,7410100,"xyloglucan 6-xylosyltransferase 2","-","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi03g05980",7411704,7416039,"Thiamine pyrophosphokinase (EC 2.7.6.2)","thiamine diphosphate biosynthetic process [GO:0009229]; thiamine metabolic process [GO:0006772]","cytosol [GO:0005829]","ATP binding [GO:0005524]; kinase activity [GO:0016301]; thiamine binding [GO:0030975]; thiamine diphosphokinase activity [GO:0004788]"]
[null,"Vradi03g05990",7417019,7425464,"U6 snRNA-associated Sm-like protein LSm4","mRNA splicing, via spliceosome [GO:0000398]; nuclear-transcribed mRNA catabolic process [GO:0000956]","spliceosomal complex [GO:0005681]","RNA binding [GO:0003723]"]
[null,"Vradi03g06000",7427144,7431208,"WD repeat-containing protein 89 homolog","-","-","-"]
[null,"Vradi03g06010",7432008,7435884,"uncharacterized protein OsI_027940","-","-","-"]
["Chr3:7660001-8320000","Vradi03g06200",7658909,7667011,"GTP diphosphokinase (EC 2.7.6.5)","guanosine tetraphosphate metabolic process [GO:0015969]","-","ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTP diphosphokinase activity [GO:0008728]; kinase activity [GO:0016301]"]
[null,"Vradi03g06210",7667777,7668979,"-","-","-","-"]
[null,"Vradi03g06220",7674815,7676688,"Ribosomal protein L19","translation [GO:0006412]","cytosolic large ribosomal subunit [GO:0022625]","RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]"]
[null,"Vradi03g06230",7678578,7683246,"Ethylene response sensor","-","endoplasmic reticulum [GO:0005783]","ethylene binding [GO:0051740]; phosphorelay sensor kinase activity [GO:0000155]"]
[null,"Vradi03g06240",7692568,7695392,"probable polygalacturonase isoform X1","carbohydrate metabolic process [GO:0005975]","cell wall [GO:0005618]; integral component of membrane [GO:0016021]","polygalacturonase activity [GO:0004650]"]
[null,"Vradi03g06250",7696305,7697200,"uncharacterized protein LOC106757492","-","-","-"]
[null,"Vradi03g06260",7698001,7703790,"-","-","-","-"]
[null,"Vradi03g06270",7713205,7717389,"nicotinamide adenine dinucleotide transporter 1, chloroplastic","transmembrane transport [GO:0055085]","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g06280",7718761,7722106,"uncharacterized protein LOC106757306","-","-","-"]
[null,"Vradi03g06290",7723369,7726349,"protein DEHYDRATION-INDUCED 19 homolog 3","-","-","-"]
[null,"Vradi03g06300",7730074,7734518,"syntaxin-43","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]"]
[null,"Vradi03g06310",7736082,7740317,"cellulose synthase-like protein D5","cellulose biosynthetic process [GO:0030244]","integral component of membrane [GO:0016021]","cellulose synthase (UDP-forming) activity [GO:0016760]"]
[null,"Vradi03g06320",7746066,7747103,"Hexosyltransferase (EC 2.4.1.-)","-","-","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi03g06330",7750425,7750865,"uncharacterized protein LOC106757472","-","-","-"]
[null,"Vradi03g06340",7766422,7767222,"uncharacterized protein LOC106757481","-","-","-"]
[null,"Vradi03g06350",7776150,7777870,"uncharacterized protein LOC106756973","-","-","-"]
[null,"Vradi03g06360",7781813,7782439,"uncharacterized protein LOC106756974","-","-","-"]
[null,"Vradi03g06370",7789332,7792703,"transcription factor MYB111-like","-","nucleus [GO:0005634]","-"]
[null,"Vradi03g06380",7798617,7803820,"dnaJ protein ERDJ3B","protein folding [GO:0006457]","-","unfolded protein binding [GO:0051082]"]
[null,"Vradi03g06390",7807303,7810138,"uncharacterized protein LOC106756976 isoform X1","lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]","phospholipase A1 activity [GO:0008970]"]
[null,"Vradi03g06400",7818488,7821307,"-","-","-","-"]
[null,"Vradi03g06410",7830005,7834311,"probable beta-D-xylosidase 2","carbohydrate metabolic process [GO:0005975]","extracellular region [GO:0005576]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]"]
[null,"Vradi03g06420",7840056,7840634,"uncharacterized protein LOC106757511","-","-","-"]
[null,"Vradi03g06430",7855433,7868479,"uncharacterized protein LOC106757847","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g06440",7887336,7888233,"uncharacterized protein LOC106757436","-","-","-"]
[null,"Vradi03g06450",7892435,7895271,"E3 ubiquitin-protein ligase MARCH1","-","integral component of membrane [GO:0016021]","zinc ion binding [GO:0008270]"]
[null,"Vradi03g06460",7895512,7904187,"DNA mismatch repair protein","mismatch repair [GO:0006298]","-","ATP binding [GO:0005524]; mismatched DNA binding [GO:0030983]"]
[null,"Vradi03g06470",7905606,7910893,"DNA replication licensing factor MCM7 (EC 3.6.4.12)","cell cycle [GO:0007049]; DNA replication initiation [GO:0006270]","MCM complex [GO:0042555]; nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]"]
[null,"Vradi03g06480",7915916,7924191,"Vacuolar protein sorting-associated protein 51 homolog","endocytic recycling [GO:0032456]; Golgi organization [GO:0007030]; lipid transport [GO:0006869]; protein transport [GO:0015031]; retrograde transport, endosome to Golgi [GO:0042147]","cytosol [GO:0005829]; GARP complex [GO:0000938]","-"]
[null,"Vradi03g06490",7927678,7928112,"bZIP transcription factor 53","-","-","DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi03g06500",7931669,7932067,"calvin cycle protein CP12-2, chloroplastic-like","-","chloroplast [GO:0009507]","-"]
[null,"Vradi03g06510",7934693,7941364,"probable glutamyl endopeptidase, chloroplastic isoform X1","-","-","serine-type peptidase activity [GO:0008236]"]
[null,"Vradi03g06520",7946153,7947863,"protein trichome birefringence-like 6","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g06530",7950119,7957491,"histone-lysine N-methyltransferase EZ2-like","methylation [GO:0032259]","PcG protein complex [GO:0031519]","methyltransferase activity [GO:0008168]"]
[null,"Vradi03g06540",7959965,7961879,"DELLA protein RGL1-like","-","nucleus [GO:0005634]","-"]
[null,"Vradi03g06550",7965336,7966196,"uncharacterized protein LOC106757461","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g06560",7968517,7970262,"probable WRKY transcription factor 69","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[null,"Vradi03g06570",7974635,7981170,"uncharacterized protein LOC106754020","-","-","enzyme inhibitor activity [GO:0004857]"]
[null,"Vradi03g06580",7982881,7988415,"-","-","-","-"]
[null,"Vradi03g06590",7991238,7994659,"DEAD-box ATP-dependent RNA helicase 57","-","-","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[null,"Vradi03g06600",8000347,8014717,"nodal modulator 1","-","integral component of membrane [GO:0016021]","carbohydrate binding [GO:0030246]"]
[null,"Vradi03g06610",8024691,8027545,"stachyose synthase","carbohydrate metabolic process [GO:0005975]","-","-"]
[null,"Vradi03g06620",8043878,8045831,"probable WRKY transcription factor 23","-","integral component of membrane [GO:0016021]; nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[null,"Vradi03g06630",8046718,8055799,"flowering time control protein FCA isoform X2","-","-","RNA binding [GO:0003723]"]
[null,"Vradi03g06640",8062382,8066626,"uncharacterized protein LOC106757859 isoform X2","-","-","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[null,"Vradi03g06650",8069253,8073455,"probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2","-","-","ATP binding [GO:0005524]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]"]
[null,"Vradi03g06660",8074200,8077047,"stachyose synthase-like","carbohydrate metabolic process [GO:0005975]","-","-"]
[null,"Vradi03g06670",8077854,8078845,"nifU-like protein 1, chloroplastic","iron-sulfur cluster assembly [GO:0016226]","chloroplast [GO:0009507]","iron ion binding [GO:0005506]; iron-sulfur cluster binding [GO:0051536]"]
[null,"Vradi03g06680",8079875,8086683,"SWR1-complex protein 4","chromatin remodeling [GO:0006338]; DNA repair [GO:0006281]; histone H2A acetylation [GO:0043968]; histone H4 acetylation [GO:0043967]","NuA4 histone acetyltransferase complex [GO:0035267]","-"]
[null,"Vradi03g06690",8092219,8095631,"gibberellin 2-beta-dioxygenase 2","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[null,"Vradi03g06700",8099071,8100140,"-","-","-","-"]
[null,"Vradi03g06710",8112799,8114188,"transcription factor JAMYB-like","-","nucleus [GO:0005634]","-"]
[null,"Vradi03g06720",8131758,8132976,"Hexosyltransferase (EC 2.4.1.-)","-","-","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi03g06730",8137404,8138914,"-","-","-","-"]
[null,"Vradi03g06740",8139937,8144344,"nitrogen regulatory protein P-II homolog","regulation of nitrogen utilization [GO:0006808]","-","enzyme regulator activity [GO:0030234]"]
[null,"Vradi03g06750",8144552,8145302,"uncharacterized protein LOC106757449","-","-","-"]
[null,"Vradi03g06760",8156522,8161057,"boron transporter 1","-","integral component of membrane [GO:0016021]","inorganic anion exchanger activity [GO:0005452]"]
[null,"Vradi03g06770",8186350,8189187,"polygalacturonase At1g48100 isoform X2","carbohydrate metabolic process [GO:0005975]","cell wall [GO:0005618]","polygalacturonase activity [GO:0004650]"]
[null,"Vradi03g06780",8192240,8207577,"short-chain dehydrogenase reductase 3b","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi03g06790",8209463,8212313,"uncharacterized protein LOC106757325","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g06800",8215775,8219967,"RING-type E3 ubiquitin transferase (EC 2.3.2.27)","rescue of stalled ribosome [GO:0072344]","-","metal ion binding [GO:0046872]; ubiquitin protein ligase activity [GO:0061630]"]
[null,"Vradi03g06810",8222750,8234797,"uncharacterized protein LOC106757805 isoform X1","-","-","-"]
[null,"Vradi03g06820",8260262,8262814,"pto-interacting protein 1","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi03g06830",8265889,8272523,"-","-","-","-"]
[null,"Vradi03g06840",8276029,8277609,"uncharacterized protein LOC106757340","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g06850",8293633,8298666,"uncharacterized protein LOC106756827 isoform X1","-","-","translation release factor activity, codon specific [GO:0016149]"]
[null,"Vradi03g06860",8307611,8309146,"pentatricopeptide repeat-containing protein At4g02750","-","-","-"]
[null,"Vradi03g06870",8312076,8314392,"-","-","-","-"]
["Chr3:8780001-9220000","Vradi03g07330",8799882,8802844,"uncharacterized protein LOC106757995","-","cytosol [GO:0005829]","pyroglutamyl-peptidase activity [GO:0016920]"]
[null,"Vradi03g07340",8806553,8812339,"Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)","glucose metabolic process [GO:0006006]; pentose-phosphate shunt [GO:0006098]","-","glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]"]
[null,"Vradi03g07350",8816617,8817018,"protein NIM1-INTERACTING 1 isoform X2","regulation of systemic acquired resistance [GO:0010112]","nucleus [GO:0005634]","-"]
[null,"Vradi03g07360",8820418,8825162,"GDSL esterase/lipase At1g09390","-","-","hydrolase activity, acting on ester bonds [GO:0016788]"]
[null,"Vradi03g07370",8834491,8837276,"WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi03g07380",8839538,8841799,"Hexosyltransferase (EC 2.4.1.-)","-","-","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi03g07390",8848964,8850657,"chloroplast stem-loop binding protein of 41 kDa b, chloroplastic","-","-","catalytic activity [GO:0003824]"]
[null,"Vradi03g07400",8863071,8865689,"-","-","-","-"]
[null,"Vradi03g07410",8867806,8871196,"Alkaline/neutral invertase (EC 3.2.1.26)","sucrose catabolic process [GO:0005987]","-","glycopeptide alpha-N-acetylgalactosaminidase activity [GO:0033926]; sucrose alpha-glucosidase activity [GO:0004575]"]
[null,"Vradi03g07420",8871796,8873769,"protein RTF1 homolog","-","-","DNA binding [GO:0003677]"]
[null,"Vradi03g07430",8893356,8893773,"-","-","-","-"]
[null,"Vradi03g07440",8900531,8901082,"transcription factor bHLH149","-","-","-"]
[null,"Vradi03g07450",8905088,8923368,"protein SUPPRESSOR OF QUENCHING 1, chloroplastic","-","-","hydrolase activity [GO:0016787]"]
[null,"Vradi03g07460",8927875,8934272,"RING finger protein B isoform X2","-","-","-"]
[null,"Vradi03g07470",8943326,8947497,"homeobox protein knotted-1-like 1 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]"]
[null,"Vradi03g07480",8953067,8954017,"nicotianamine synthase","nicotianamine biosynthetic process [GO:0030418]","-","nicotianamine synthase activity [GO:0030410]"]
[null,"Vradi03g07490",8963342,8964966,"uncharacterized protein LOC106756998 isoform X2","-","-","-"]
[null,"Vradi03g07500",8965505,8969245,"peptide chain release factor PrfB2, chloroplastic","-","cytoplasm [GO:0005737]","translation release factor activity, codon specific [GO:0016149]"]
[null,"Vradi03g07510",8969743,8971118,"universal stress protein A-like protein","-","-","-"]
[null,"Vradi03g07520",8974649,8976218,"-","-","-","-"]
[null,"Vradi03g07530",8978825,8981729,"zinc finger matrin-type protein 2","mRNA splicing, via spliceosome [GO:0000398]","spliceosomal complex [GO:0005681]","nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]"]
[null,"Vradi03g07540",8986747,8991034,"-","-","-","-"]
[null,"Vradi03g07550",8994949,8995920,"uncharacterized protein LOC106757733 isoform X1","-","-","-"]
[null,"Vradi03g07560",9003364,9007852,"uncharacterized protein LOC106757905","-","-","-"]
[null,"Vradi03g07570",9020108,9035851,"calmodulin-binding protein 60 G isoform X1","-","-","calmodulin binding [GO:0005516]"]
[null,"Vradi03g07580",9039391,9040612,"-","-","-","-"]
[null,"Vradi03g07590",9043348,9050509,"Importin subunit alpha","protein import into nucleus [GO:0006606]","cytoplasm [GO:0005737]","nuclear import signal receptor activity [GO:0061608]"]
[null,"Vradi03g07600",9055648,9055987,"GATA transcription factor 16","regulation of transcription, DNA-templated [GO:0006355]","integral component of membrane [GO:0016021]","sequence-specific DNA binding [GO:0043565]; zinc ion binding [GO:0008270]"]
[null,"Vradi03g07610",9060386,9064148,"exonuclease DPD1, chloroplastic/mitochondrial","-","-","exonuclease activity [GO:0004527]; nucleic acid binding [GO:0003676]"]
[null,"Vradi03g07620",9066915,9072727,"kinesin-like protein KIN-14I","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]"]
[null,"Vradi03g07630",9074185,9077665,"probable protein phosphatase 2C 5 isoform X1","-","-","phosphatase activity [GO:0016791]"]
[null,"Vradi03g07640",9085594,9094833,"topless-related protein 3","regulation of transcription, DNA-templated [GO:0006355]","-","-"]
[null,"Vradi03g07650",9097729,9100884,"probable protein phosphatase 2C 34 isoform X1","-","-","phosphatase activity [GO:0016791]"]
[null,"Vradi03g07660",9107784,9109201,"CST complex subunit TEN1 isoform X3","-","CST complex [GO:1990879]","single-stranded DNA binding [GO:0003697]"]
[null,"Vradi03g07670",9129026,9134046,"Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[null,"Vradi03g07680",9136945,9139048,"pentatricopeptide repeat-containing protein At5g48910","-","-","zinc ion binding [GO:0008270]"]
[null,"Vradi03g07690",9140722,9142182,"uncharacterized protein LOC106757367 isoform X5","female meiotic nuclear division [GO:0007143]; male meiotic nuclear division [GO:0007140]","-","-"]
[null,"Vradi03g07700",9166874,9171140,"cytochrome c oxidase assembly protein COX11, mitochondrial","-","integral component of membrane [GO:0016021]; mitochondrial inner membrane [GO:0005743]","copper ion binding [GO:0005507]"]
[null,"Vradi03g07710",9201606,9206622,"transcription repressor KAN1 isoform X1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi03g07720",9210948,9213783,"uncharacterized protein LOC106756790","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g07730",9214703,9216502,"uncharacterized oxidoreductase At4g09670","-","-","oxidoreductase activity [GO:0016491]"]
["Chr3:11080001-11260000","Vradi03g09170",11129932,11131520,"glutathione S-transferase U9","glutathione metabolic process [GO:0006749]","-","transferase activity [GO:0016740]"]
[null,"Vradi03g09180",11133014,11137544,"Methyltransferase (EC 2.1.1.-)","methylation [GO:0032259]","integral component of membrane [GO:0016021]","methyltransferase activity [GO:0008168]"]
[null,"Vradi03g09190",11141720,11145402,"NAP1-related protein 2 isoform X1","nucleosome assembly [GO:0006334]","nucleus [GO:0005634]","-"]
[null,"Vradi03g09200",11161540,11162388,"transcription factor TCP14","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi03g09210",11179655,11192253,"uncharacterized protein LOC106757551 isoform X2","-","-","-"]
[null,"Vradi03g09220",11195329,11196650,"transcription factor bHLH47 isoform X2","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]"]
[null,"Vradi03g09230",11200004,11201796,"HVA22-like protein","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g09240",11203885,11209323,"microtubule-associated protein RP/EB family member 1B","cell cycle [GO:0007049]; cell division [GO:0051301]","cytoplasm [GO:0005737]; microtubule [GO:0005874]","microtubule binding [GO:0008017]"]
[null,"Vradi03g09250",11214563,11216403,"40S ribosomal protein S9-2","translation [GO:0006412]","small ribosomal subunit [GO:0015935]","rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]"]
[null,"Vradi03g09260",11219278,11219964,"pectinesterase 3","-","integral component of membrane [GO:0016021]","enzyme inhibitor activity [GO:0004857]"]
[null,"Vradi03g09270",11220704,11221092,"-","-","-","-"]
[null,"Vradi03g09280",11223791,11226432,"39S ribosomal protein L47, mitochondrial","translation [GO:0006412]","mitochondrial ribosome [GO:0005761]","structural constituent of ribosome [GO:0003735]"]
[null,"Vradi03g09290",11240573,11242652,"LOW QUALITY PROTEIN: organic cation/carnitine transporter 6-like","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
["Chr3:11480001-11780000","Vradi03g09400",11504825,11515509,"heparanase-like protein 1","-","membrane [GO:0016020]","hydrolase activity, acting on glycosyl bonds [GO:0016798]"]
[null,"Vradi03g09410",11517305,11519489,"SNAP25 homologous protein SNAP33","protein transport [GO:0015031]","-","-"]
[null,"Vradi03g09420",11555583,11562473,"Cysteine dioxygenase (EC 1.13.11.20)","-","-","cysteine dioxygenase activity [GO:0017172]; metal ion binding [GO:0046872]"]
[null,"Vradi03g09430",11563134,11567323,"Phosphopyruvate hydratase (EC 4.2.1.11)","glycolytic process [GO:0006096]","phosphopyruvate hydratase complex [GO:0000015]","magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]"]
[null,"Vradi03g09440",11588184,11602982,"probable acyl-activating enzyme 17, peroxisomal isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g09450",11604468,11610434,"ATP synthase subunit gamma, mitochondrial","-","proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]","proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]"]
[null,"Vradi03g09460",11618331,11622713,"mitochondrial substrate carrier family protein E isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g09470",11624612,11634043,"uncharacterized protein LOC106757036","-","-","-"]
[null,"Vradi03g09480",11643555,11648920,"uncharacterized protein LOC106757527 isoform X2","-","-","metal ion binding [GO:0046872]"]
[null,"Vradi03g09490",11667520,11668178,"PLASMODESMATA CALLOSE-BINDING PROTEIN 3 isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi03g09500",11669641,11725472,"DExH-box ATP-dependent RNA helicase DExH14 isoform X4","-","spliceosomal complex [GO:0005681]","ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]"]
[null,"Vradi03g09510",11730660,11734720,"flavonoid 3'-monooxygenase","-","-","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi03g09520",11762625,11764206,"-","-","-","-"]
[null,"Vradi03g09530",11765489,11770350,"protein LEO1 homolog","histone modification [GO:0016570]; transcription elongation from RNA polymerase II promoter [GO:0006368]","Cdc73/Paf1 complex [GO:0016593]","-"]
["Chr4:3420001-3620000","Vradi04g01070",3438295,3440597,"-","-","-","-"]
[null,"Vradi04g01080",3440931,3441722,"-","-","-","-"]
[null,"Vradi04g01090",3455396,3456430,"-","-","-","-"]
[null,"Vradi04g01100",3458390,3460944,"(1->3)-beta-glucan endohydrolase (EC 3.2.1.39) (Beta-1,3-endoglucanase)","carbohydrate metabolic process [GO:0005975]","-","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]"]
[null,"Vradi04g01110",3469115,3472278,"UV-B-induced protein At3g17800, chloroplastic isoform X2","-","-","-"]
[null,"Vradi04g01120",3500812,3501909,"-","-","-","-"]
[null,"Vradi04g01130",3545588,3546052,"-","-","-","-"]
[null,"Vradi04g01140",3548409,3549143,"-","-","-","-"]
[null,"Vradi04g01150",3558288,3558527,"-","-","-","-"]
[null,"Vradi04g01160",3567146,3568312,"40S ribosomal protein S20-2","translation [GO:0006412]","small ribosomal subunit [GO:0015935]","RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]"]
[null,"Vradi04g01170",3582302,3585311,"chloroplast envelope quinone oxidoreductase homolog","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi04g01180",3611620,3614094,"Protein FAR1-RELATED SEQUENCE","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","zinc ion binding [GO:0008270]"]
["Chr4:3720001-3940000","Vradi04g01240",3740481,3741591,"FHA domain-containing protein FHA2","-","-","-"]
[null,"Vradi04g01250",3744518,3746710,"-","-","-","-"]
[null,"Vradi04g01260",3746963,3755122,"uncharacterized protein LOC106754774","-","-","-"]
[null,"Vradi04g01270",3774142,3780721,"ethylene-responsive transcription factor-like protein At4g13040 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi04g01280",3840241,3847304,"uncharacterized protein LOC106758690","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi04g01290",3850448,3853571,"Hexosyltransferase (EC 2.4.1.-)","cell wall organization [GO:0071555]; pectin biosynthetic process [GO:0045489]","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","polygalacturonate 4-alpha-galacturonosyltransferase activity [GO:0047262]"]
[null,"Vradi04g01300",3856318,3857804,"Glycosyltransferase (EC 2.4.1.-)","-","-","UDP-glycosyltransferase activity [GO:0008194]"]
[null,"Vradi04g01310",3880718,3881669,"-","-","-","-"]
[null,"Vradi04g01320",3903896,3904504,"probable inactive dual specificity protein phosphatase-like At4g18593","-","-","-"]
[null,"Vradi04g01330",3905998,3911078,"uncharacterized protein LOC106758117","-","-","-"]
[null,"Vradi04g01340",3931417,3935377,"-","-","-","-"]
["Chr4:4120001-4320000","Vradi04g01390",4168862,4175957,"tetratricopeptide repeat protein 1 isoform X2","-","-","-"]
[null,"Vradi04g01400",4173595,4177146,"protein LATE FLOWERING","-","-","-"]
[null,"Vradi04g01410",4225473,4230810,"uncharacterized protein LOC106759305 isoform X2","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi04g01420",4231068,4245300,"-","-","-","-"]
[null,"Vradi04g01430",4271239,4276154,"uncharacterized protein LOC106759241 isoform X3","-","-","-"]
[null,"Vradi04g01440",4281985,4283375,"uncharacterized protein LOC106759063","-","-","-"]
[null,"Vradi04g01450",4305301,4321747,"F-box/kelch-repeat protein At3g24760","-","-","-"]
["Chr4:7400001-7460000","Vradi04g03710",7408170,7409909,"FBD-associated F-box protein At2g26860-like","-","-","-"]
["Chr5:31160001-31180000","Vradi05g20010",31162377,31164915,"ADP,ATP carrier protein","-","chloroplast membrane [GO:0031969]; integral component of membrane [GO:0016021]","ATP:ADP antiporter activity [GO:0005471]; ATP binding [GO:0005524]"]
[null,"Vradi05g20020",31166629,31168825,"root phototropism protein 3","protein ubiquitination [GO:0016567]","-","-"]
[null,"Vradi05g20030",31170380,31173404,"myosin-2","-","-","-"]
["Chr6:1560001-1700000","Vradi06g01490",1568966,1573026,"-","-","-","-"]
[null,"Vradi06g01500",1577178,1577750,"uncharacterized protein LOC106764516","-","-","enzyme inhibitor activity [GO:0004857]"]
[null,"Vradi06g01510",1590404,1592416,"(1->3)-beta-glucan endohydrolase (EC 3.2.1.39) (Beta-1,3-endoglucanase)","carbohydrate metabolic process [GO:0005975]","-","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]"]
[null,"Vradi06g01520",1598846,1601213,"Endoglucanase (EC 3.2.1.4)","cellulose catabolic process [GO:0030245]","-","cellulase activity [GO:0008810]"]
[null,"Vradi06g01530",1608768,1609536,"uncharacterized protein LOC106764409 isoform X2","-","-","-"]
[null,"Vradi06g01540",1610593,1614868,"Adenylyltransferase and sulfurtransferase MOCS3 (Molybdenum cofactor synthesis protein 3) [Includes: Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) (Adenylyltransferase MOCS3) (Sulfur carrier protein MOCS2A adenylyltransferase); Molybdopterin-synthase sulfurtransferase (EC 2.8.1.11) (Sulfurtransferase MOCS3) (Sulfur carrier protein MOCS2A sulfurtransferase)]","Mo-molybdopterin cofactor biosynthetic process [GO:0006777]; tRNA wobble position uridine thiolation [GO:0002143]","cytosol [GO:0005829]","ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin-synthase adenylyltransferase activity [GO:0061605]; molybdopterin-synthase sulfurtransferase activity [GO:0061604]; thiosulfate sulfurtransferase activity [GO:0004792]; ubiquitin-like modifier activating enzyme activity [GO:0008641]"]
[null,"Vradi06g01550",1615345,1618434,"Aspartate carbamoyltransferase (EC 2.1.3.2)","'de novo' pyrimidine nucleobase biosynthetic process [GO:0006207]; 'de novo' UMP biosynthetic process [GO:0044205]; cellular amino acid metabolic process [GO:0006520]; cellular response to phosphate starvation [GO:0016036]","chloroplast stroma [GO:0009570]; cytosol [GO:0005829]","amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]"]
[null,"Vradi06g01560",1619826,1621643,"probable WRKY transcription factor 31","-","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[null,"Vradi06g01570",1624281,1626624,"transcription factor IIIA","-","-","-"]
[null,"Vradi06g01580",1631449,1636500,"splicing factor, suppressor of white-apricot homolog isoform X3","RNA processing [GO:0006396]","-","RNA binding [GO:0003723]"]
[null,"Vradi06g01590",1638239,1654467,"UPF0505 protein C16orf62 homolog isoform X2","endocytic recycling [GO:0032456]; protein transport [GO:0015031]","endosome [GO:0005768]","-"]
[null,"Vradi06g01600",1655143,1661606,"U4/U6.U5 tri-snRNP-associated protein 2","protein deubiquitination [GO:0016579]; spliceosomal complex assembly [GO:0000245]","spliceosomal complex [GO:0005681]","cysteine-type peptidase activity [GO:0008234]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; zinc ion binding [GO:0008270]"]
[null,"Vradi06g01610",1665661,1667149,"Cytochrome b561 and DOMON domain-containing protein","-","integral component of membrane [GO:0016021]","metal ion binding [GO:0046872]"]
[null,"Vradi06g01620",1669867,1676539,"CCR4-NOT transcription complex subunit 9 isoform X2","-","-","-"]
[null,"Vradi06g01630",1677438,1678921,"ribonuclease 3-like protein 2","RNA processing [GO:0006396]","cytoplasm [GO:0005737]; nucleus [GO:0005634]","ribonuclease III activity [GO:0004525]; RNA binding [GO:0003723]"]
[null,"Vradi06g01640",1689985,1690494,"uncharacterized protein LOC106764543","-","integral component of membrane [GO:0016021]","-"]
["Chr6:4880001-4980000","Vradi06g04190",4912301,4915094,"Ferritin (EC 1.16.3.1)","cellular iron ion homeostasis [GO:0006879]; iron ion transport [GO:0006826]","chloroplast [GO:0009507]","ferric iron binding [GO:0008199]; ferroxidase activity [GO:0004322]"]
[null,"Vradi06g04200",4917283,4919990,"40S ribosomal protein S4","translation [GO:0006412]","cytoplasm [GO:0005737]; ribosome [GO:0005840]","rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]"]
[null,"Vradi06g04210",4928330,4932388,"protein MID1-COMPLEMENTING ACTIVITY 1","cell surface receptor signaling pathway [GO:0007166]","-","-"]
[null,"Vradi06g04220",4937038,4943270,"-","-","-","-"]
[null,"Vradi06g04230",4937312,4939039,"uncharacterized protein LOC106764829","-","-","-"]
[null,"Vradi06g04240",4963281,4964588,"ankyrin repeat, PH and SEC7 domain containing protein secG","-","nucleus [GO:0005634]","-"]
[null,"Vradi06g04250",4965555,4971155,"sister chromatid cohesion 1 protein 1 isoform X2","sister chromatid cohesion [GO:0007062]","cohesin complex [GO:0008278]; nucleus [GO:0005634]","-"]
["Chr6:33840001-34060000","Vradi06g14280",33852242,33854624,"piRNA biogenesis protein EXD1","-","-","3'-5' exonuclease activity [GO:0008408]; RNA binding [GO:0003723]"]
[null,"Vradi06g14290",33855543,33863778,"clathrin interactor EPSIN 1","protein targeting to vacuole [GO:0006623]","clathrin-coated vesicle [GO:0030136]; Golgi apparatus [GO:0005794]","clathrin binding [GO:0030276]"]
[null,"Vradi06g14300",33877250,33892570,"RNA pseudouridine synthase 3, mitochondrial isoform X1","pseudouridine synthesis [GO:0001522]","-","pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]"]
[null,"Vradi06g14310",33893298,33898747,"uncharacterized protein LOC106762866","carbohydrate metabolic process [GO:0005975]","-","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]"]
[null,"Vradi06g14320",33951186,33956827,"homeobox protein knotted-1-like 1 isoform X2","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]"]
[null,"Vradi06g14330",33972129,33977578,"homeobox-leucine zipper protein HAT22","-","nucleus [GO:0005634]","DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; sequence-specific DNA binding [GO:0043565]"]
[null,"Vradi06g14340",34013104,34023767,"uncharacterized protein LOC106764147","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi06g14350",34024992,34033451,"CSC1-like protein RXW8 isoform X5","ion transport [GO:0006811]","integral component of membrane [GO:0016021]","-"]
[null,"Vradi06g14360",34037714,34042177,"uncharacterized protein At3g49720-like","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi06g14370",34042687,34047845,"uncharacterized protein LOC106764667 isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi06g14380",34055957,34060461,"Squalene monooxygenase (EC 1.14.14.17)","sterol biosynthetic process [GO:0016126]","integral component of membrane [GO:0016021]","flavin adenine dinucleotide binding [GO:0050660]; squalene monooxygenase activity [GO:0004506]"]
["Chr7:28620001-28920000","Vradi07g11160",28621820,28623267,"uncharacterized protein LOC106761174","-","-","-"]
[null,"Vradi07g11170",28633546,28639602,"uncharacterized protein LOC106769332 isoform X3","-","-","hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]"]
[null,"Vradi07g11180",28645006,28651028,"casein kinase II subunit alpha","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi07g11190",28680089,28681629,"probable N-acetyltransferase HLS1","-","-","N-acetyltransferase activity [GO:0008080]"]
[null,"Vradi07g11200",28691819,28697496,"BTB/POZ domain-containing protein NPY4","protein ubiquitination [GO:0016567]","-","-"]
[null,"Vradi07g11210",28720489,28724442,"Formin-like protein","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g11220",28724945,28729363,"Calcium-transporting ATPase (EC 7.2.2.10)","-","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; calcium transmembrane transporter activity, phosphorylative mechanism [GO:0005388]; calmodulin binding [GO:0005516]"]
[null,"Vradi07g11230",28734769,28737686,"BTB/POZ domain-containing protein At3g49900","protein ubiquitination [GO:0016567]","-","-"]
[null,"Vradi07g11240",28743328,28747180,"Adenylyl-sulfate kinase (EC 2.7.1.25)","hydrogen sulfide biosynthetic process [GO:0070814]; sulfate assimilation [GO:0000103]","-","adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]"]
[null,"Vradi07g11250",28747962,28748174,"-","-","-","-"]
[null,"Vradi07g11260",28752016,28754783,"uncharacterized protein LOC106767424 isoform X2","-","-","-"]
[null,"Vradi07g11270",28772095,28773153,"protein SHORT-ROOT-like","asymmetric cell division [GO:0008356]; leaf development [GO:0048366]; radial pattern formation [GO:0009956]","nucleus [GO:0005634]","DNA-binding transcription factor activity [GO:0003700]; sequence-specific DNA binding [GO:0043565]"]
[null,"Vradi07g11280",28777940,28782631,"uncharacterized protein LOC106769388 isoform X1","carbohydrate metabolic process [GO:0005975]","integral component of membrane [GO:0016021]","hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]"]
[null,"Vradi07g11290",28790278,28793268,"-","-","-","-"]
[null,"Vradi07g11300",28799751,28805334,"pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X2","-","-","-"]
[null,"Vradi07g11310",28806600,28814387,"MYB transcription factor","nucleosome assembly [GO:0006334]","nucleolus [GO:0005730]; nucleosome [GO:0000786]","DNA binding [GO:0003677]"]
[null,"Vradi07g11320",28815715,28819432,"NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial","electron transport chain [GO:0022900]","mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]","oxidoreductase activity, acting on NAD(P)H [GO:0016651]"]
[null,"Vradi07g11330",28821093,28821449,"protein RDM1","regulation of DNA methylation [GO:0044030]","nucleus [GO:0005634]","-"]
[null,"Vradi07g11340",28831626,28839763,"probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X2","arginine biosynthetic process [GO:0006526]","cytoplasm [GO:0005737]","acetyl-CoA:L-glutamate N-acetyltransferase activity [GO:0004042]"]
[null,"Vradi07g11350",28846048,28846789,"cysteine-rich and transmembrane domain-containing protein WIH1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g11360",28858399,28861461,"uncharacterized protein LOC106765636","-","-","-"]
[null,"Vradi07g11370",28883018,28886805,"B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-"]
["Chr7:28980001-29120000","Vradi07g11420",28981433,28981933,"uncharacterized protein LOC106767876","-","-","-"]
[null,"Vradi07g11430",28983434,28989556,"ACT domain-containing protein ACR1-like isoform X3","-","-","-"]
[null,"Vradi07g11440",29007242,29007487,"-","-","-","-"]
[null,"Vradi07g11450",29036546,29037067,"-","-","-","-"]
[null,"Vradi07g11460",29054965,29055725,"thioredoxin-like protein AAED1, chloroplastic","-","-","-"]
[null,"Vradi07g11470",29065659,29073020,"short-chain dehydrogenase cctT-like","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi07g11480",29077441,29081828,"AP2-like ethylene-responsive transcription factor ANT","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi07g11490",29101785,29110050,"-","-","-","-"]
["Chr7:30120001-30460000","Vradi07g12050",30121002,30125114,"calcineurin B-like protein 9","-","-","calcium ion binding [GO:0005509]"]
[null,"Vradi07g12060",30145333,30149619,"-","-","-","-"]
[null,"Vradi07g12070",30161828,30166402,"cationic amino acid transporter 6, chloroplastic","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi07g12080",30187409,30195440,"(S)-ureidoglycine aminohydrolase","allantoin catabolic process [GO:0000256]; purine nucleobase catabolic process [GO:0006145]; ureide catabolic process [GO:0010136]","-","ureidoglycine aminohydrolase activity [GO:0071522]"]
[null,"Vradi07g12090",30203157,30245148,"uncharacterized protein LOC106768407 isoform X2","RNA processing [GO:0006396]","-","RNA binding [GO:0003723]; RNA methyltransferase activity [GO:0008173]"]
[null,"Vradi07g12100",30246502,30247493,"uncharacterized protein LOC106767957 isoform X1","-","-","-"]
[null,"Vradi07g12110",30265833,30269268,"Glutamate dehydrogenase","cellular amino acid metabolic process [GO:0006520]","-","nucleotide binding [GO:0000166]; oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [GO:0016639]"]
[null,"Vradi07g12120",30269937,30271948,"light-harvesting complex-like protein 3 isotype 2, chloroplastic","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g12130",30275235,30283976,"ATP-dependent Clp protease proteolytic subunit","-","-","ATP-dependent peptidase activity [GO:0004176]; serine-type endopeptidase activity [GO:0004252]"]
[null,"Vradi07g12140",30288114,30297481,"expansin-like B1","-","extracellular region [GO:0005576]","-"]
[null,"Vradi07g12150",30307318,30311032,"-","-","-","-"]
[null,"Vradi07g12160",30313884,30316495,"expansin-like B1","-","extracellular region [GO:0005576]","-"]
[null,"Vradi07g12170",30318283,30319071,"-","-","-","-"]
[null,"Vradi07g12180",30320619,30326553,"GATA transcription factor 26","regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","sequence-specific DNA binding [GO:0043565]; zinc ion binding [GO:0008270]"]
[null,"Vradi07g12190",30348069,30350362,"-","-","-","-"]
[null,"Vradi07g12200",30359393,30361601,"putative glycerol-3-phosphate transporter 4 isoform X1","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi07g12210",30363401,30364650,"protein ECERIFERUM 26-like","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[null,"Vradi07g12220",30371889,30372293,"-","-","-","-"]
[null,"Vradi07g12230",30378507,30381938,"GTP-binding protein YPTM1 isoform X2","-","-","GTPase activity [GO:0003924]; GTP binding [GO:0005525]"]
[null,"Vradi07g12240",30384461,30386523,"-","-","-","-"]
[null,"Vradi07g12250",30394204,30395787,"-","-","-","-"]
[null,"Vradi07g12260",30419497,30428351,"uncharacterized protein LOC106768426","-","-","metal ion binding [GO:0046872]; N-acetyltransferase activity [GO:0008080]; transcription corepressor activity [GO:0003714]"]
[null,"Vradi07g12270",30432783,30435990,"probable enoyl-CoA hydratase 2, mitochondrial","-","-","catalytic activity [GO:0003824]"]
["Chr7:35960001-36060000","Vradi07g15550",35965603,35968682,"NAD(P)H dehydrogenase (quinone) (EC 1.6.5.2)","-","-","FMN binding [GO:0010181]; NADH dehydrogenase (quinone) activity [GO:0050136]; NADPH dehydrogenase (quinone) activity [GO:0008753]"]
[null,"Vradi07g15560",35994059,35995165,"RING-type E3 ubiquitin transferase (EC 2.3.2.27)","-","-","ubiquitin-protein transferase activity [GO:0004842]"]
[null,"Vradi07g15570",36048346,36048633,"-","-","-","-"]
["Chr7:36080001-36380000","Vradi07g15590",36094983,36096675,"Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)","organic substance metabolic process [GO:0071704]","extracellular region [GO:0005576]","mannan endo-1,4-beta-mannosidase activity [GO:0016985]"]
[null,"Vradi07g15600",36098026,36099632,"-","-","-","-"]
[null,"Vradi07g15610",36117936,36121679,"Receptor-like serine/threonine-protein kinase (EC 2.7.11.1)","recognition of pollen [GO:0048544]","integral component of membrane [GO:0016021]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[null,"Vradi07g15620",36128456,36130546,"protein PLANT CADMIUM RESISTANCE 7","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g15630",36136464,36138007,"uncharacterized protein LOC106765664","-","-","-"]
[null,"Vradi07g15640",36189449,36195729,"lysine-specific demethylase JMJ25","methylation [GO:0032259]","-","methyltransferase activity [GO:0008168]"]
[null,"Vradi07g15650",36206461,36208050,"transcription factor MYB102","-","nucleus [GO:0005634]","-"]
[null,"Vradi07g15660",36250363,36254781,"vesicle-associated protein 4-2","-","endoplasmic reticulum membrane [GO:0005789]","-"]
[null,"Vradi07g15670",36267563,36270678,"sugar transport protein 10-like","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi07g15680",36302919,36304616,"uncharacterized protein LOC106769220","-","-","-"]
[null,"Vradi07g15690",36319783,36324707,"protein TRANSPORT INHIBITOR RESPONSE 1","protein ubiquitination [GO:0016567]","-","-"]
[null,"Vradi07g15700",36369716,36374342,"NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9)","-","mitochondrial inner membrane [GO:0005743]; peroxisome [GO:0005777]","calcium ion binding [GO:0005509]; NADH dehydrogenase (quinone) activity [GO:0050136]"]
["Chr7:36440001-36640000","Vradi07g15740",36440428,36441075,"F-box protein At1g61340","-","-","-"]
[null,"Vradi07g15750",36448075,36453097,"telomerase Cajal body protein 1","-","-","-"]
[null,"Vradi07g15760",36461582,36465631,"Riboflavin kinase (EC 2.7.1.26)","FMN biosynthetic process [GO:0009398]; riboflavin biosynthetic process [GO:0009231]","-","ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; riboflavin kinase activity [GO:0008531]"]
[null,"Vradi07g15770",36481121,36481612,"receptor like protein 3-like","-","-","-"]
[null,"Vradi07g15780",36486399,36486743,"-","-","-","-"]
[null,"Vradi07g15790",36487754,36501725,"Anaphase-promoting complex subunit 4","anaphase-promoting complex-dependent catabolic process [GO:0031145]; cell cycle [GO:0007049]; cell division [GO:0051301]; regulation of mitotic metaphase/anaphase transition [GO:0030071]","anaphase-promoting complex [GO:0005680]","-"]
[null,"Vradi07g15800",36504507,36510564,"calmodulin-binding protein 60 D","-","-","calmodulin binding [GO:0005516]"]
[null,"Vradi07g15810",36517154,36519097,"ribosomal RNA-processing protein 17","-","nucleolus [GO:0005730]","-"]
[null,"Vradi07g15820",36522699,36526795,"sphingosine kinase 1 isoform X1","-","-","NAD+ kinase activity [GO:0003951]"]
[null,"Vradi07g15830",36528629,36529543,"syntaxin-125 isoform X2","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","integral component of membrane [GO:0016021]","SNAP receptor activity [GO:0005484]"]
[null,"Vradi07g15840",36531135,36531773,"Vacuolar protein sorting-associated protein 28 homolog","protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]","ESCRT I complex [GO:0000813]","-"]
[null,"Vradi07g15850",36535038,36538642,"Aspergillus nuclease S(1) (EC 3.1.30.1)","DNA catabolic process [GO:0006308]","-","endonuclease activity [GO:0004519]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]"]
[null,"Vradi07g15860",36553096,36555468,"GDSL esterase/lipase At5g14450","-","-","hydrolase activity, acting on ester bonds [GO:0016788]"]
[null,"Vradi07g15870",36560534,36565099,"internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial","-","-","oxidoreductase activity [GO:0016491]"]
[null,"Vradi07g15880",36629989,36632310,"3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)","inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphorylation [GO:0046854]; sulfur compound metabolic process [GO:0006790]","-","3'(2'),5'-bisphosphate nucleotidase activity [GO:0008441]"]
[null,"Vradi07g15890",36632810,36639652,"Secretory carrier-associated membrane protein (Secretory carrier membrane protein)","protein transport [GO:0015031]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; transport vesicle membrane [GO:0030658]","-"]
["Chr7:44240001-44360000","Vradi07g21560",44247529,44252854,"phosphopantetheine adenylyltransferase","biosynthetic process [GO:0009058]","-","nucleotidyltransferase activity [GO:0016779]"]
[null,"Vradi07g21570",44264010,44270855,"autophagy-related protein 11","autophagosome assembly [GO:0000045]; autophagy of mitochondrion [GO:0000422]","-","-"]
[null,"Vradi07g21580",44271666,44273130,"uncharacterized protein LOC106767291","-","-","-"]
[null,"Vradi07g21590",44283249,44283776,"ribonuclease H2 subunit C","RNA catabolic process [GO:0006401]","ribonuclease H2 complex [GO:0032299]","-"]
[null,"Vradi07g21600",44284509,44287394,"nuclear pore complex protein NUP43","-","-","-"]
[null,"Vradi07g21610",44291687,44292117,"uncharacterized protein LOC106767862","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g21620",44293484,44296009,"-","-","-","-"]
[null,"Vradi07g21630",44300256,44302925,"AP2-like ethylene-responsive transcription factor At1g16060","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi07g21640",44303952,44310698,"gamma-glutamyl peptidase 3","glutamine metabolic process [GO:0006541]","-","-"]
[null,"Vradi07g21650",44330311,44334744,"-","-","-","-"]
[null,"Vradi07g21660",44338620,44344292,"autophagy-related protein 18b isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g21670",44345765,44348260,"transmembrane protein 208 homolog","-","endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g21680",44351571,44362954,"AFG1-like ATPase isoform X2","-","-","ATP binding [GO:0005524]"]
[null,"Vradi07g21690",44359440,44369630,"5'-nucleotidase domain-containing protein DDB_G0275467","-","-","hydrolase activity [GO:0016787]; metal ion binding [GO:0046872]"]
["Chr7:45200001-45480000","Vradi07g22270",45202386,45207582,"replication protein A 32 kDa subunit A","DNA recombination [GO:0006310]; DNA repair [GO:0006281]; DNA replication [GO:0006260]","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi07g22280",45219210,45224358,"AP2-like ethylene-responsive transcription factor AIL5","-","nucleus [GO:0005634]","DNA binding [GO:0003677]; DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi07g22290",45242075,45247313,"VIN3-like protein 2","-","nucleus [GO:0005634]","-"]
[null,"Vradi07g22300",45250035,45251121,"Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39)","photorespiration [GO:0009853]; reductive pentose-phosphate cycle [GO:0019253]","chloroplast [GO:0009507]","monooxygenase activity [GO:0004497]; ribulose-bisphosphate carboxylase activity [GO:0016984]"]
[null,"Vradi07g22310",45257178,45257912,"U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein","mRNA processing [GO:0006397]; RNA splicing [GO:0008380]","nucleus [GO:0005634]","-"]
[null,"Vradi07g22320",45267929,45270021,"probable receptor-like serine/threonine-protein kinase At5g57670","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi07g22330",45278292,45285789,"WD repeat-containing protein 75","-","-","-"]
[null,"Vradi07g22340",45287859,45292359,"uncharacterized protein LOC106765843","-","-","-"]
[null,"Vradi07g22350",45299843,45305143,"homogentisate phytyltransferase 1, chloroplastic isoform X4","-","integral component of membrane [GO:0016021]","prenyltransferase activity [GO:0004659]"]
[null,"Vradi07g22360",45329354,45329828,"-","-","-","-"]
[null,"Vradi07g22370",45337101,45338306,"uncharacterized protein LOC106767282","-","-","-"]
[null,"Vradi07g22380",45352015,45352602,"transcription factor bHLH146","-","-","-"]
[null,"Vradi07g22390",45357374,45358762,"uncharacterized protein LOC106766950","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g22400",45367933,45370902,"uncharacterized protein LOC106769261","-","-","-"]
[null,"Vradi07g22410",45373097,45374744,"Peroxidase (EC 1.11.1.7)","hydrogen peroxide catabolic process [GO:0042744]; response to oxidative stress [GO:0006979]","extracellular region [GO:0005576]","heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]"]
[null,"Vradi07g22420",45379930,45387088,"Glucose-6-phosphate 1-epimerase (EC 5.1.3.15)","carbohydrate metabolic process [GO:0005975]","-","carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]"]
[null,"Vradi07g22430",45391055,45403950,"villin-4","actin filament capping [GO:0051693]; cytoskeleton organization [GO:0007010]","-","actin filament binding [GO:0051015]"]
[null,"Vradi07g22440",45407636,45409003,"shikimate O-hydroxycinnamoyltransferase","-","-","transferase activity, transferring acyl groups other than amino-acyl groups [GO:0016747]"]
[null,"Vradi07g22450",45417541,45420074,"probable 18S rRNA (Guanine-N(7))-methyltransferase","rRNA (guanine-N7)-methylation [GO:0070476]","cytoplasm [GO:0005737]; nucleus [GO:0005634]","rRNA (guanine) methyltransferase activity [GO:0016435]"]
[null,"Vradi07g22460",45421207,45432375,"pumilio homolog 2 isoform X2","regulation of translation [GO:0006417]","-","RNA binding [GO:0003723]"]
[null,"Vradi07g22470",45433680,45437791,"mitochondrial outer membrane import complex protein METAXIN","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi07g22480",45439016,45443524,"nitrate regulatory gene2 protein","-","-","-"]
[null,"Vradi07g22490",45460704,45472567,"putative inactive cadmium/zinc-transporting ATPase HMA3 isoform X2","-","integral component of membrane [GO:0016021]","ATPase-coupled cation transmembrane transporter activity [GO:0019829]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]"]
["Chr8:2500001-3020000","Vradi08g01660",2521746,2522312,"Dirigent protein","-","apoplast [GO:0048046]","-"]
[null,"Vradi08g01670",2539607,2543865,"uncharacterized protein LOC106771050","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g01680",2556014,2556418,"zinc finger protein 8","response to gibberellin [GO:0009739]; trichome morphogenesis [GO:0010090]","-","DNA-binding transcription factor activity [GO:0003700]"]
[null,"Vradi08g01690",2588007,2619873,"kinesin-like protein KIN-7K, chloroplastic","microtubule-based movement [GO:0007018]","-","ATP binding [GO:0005524]; ATP-dependent microtubule motor activity [GO:1990939]; microtubule binding [GO:0008017]"]
[null,"Vradi08g01700",2620376,2631021,"uncharacterized protein LOC106772159 isoform X1","-","-","-"]
[null,"Vradi08g01710",2644883,2648528,"probable protein kinase At2g41970","-","-","ATP binding [GO:0005524]; protein tyrosine kinase activity [GO:0004713]"]
[null,"Vradi08g01720",2658902,2662061,"uncharacterized protein LOC111242347","phloem development [GO:0010088]","-","-"]
[null,"Vradi08g01730",2676703,2679201,"activator of 90 kDa heat shock protein ATPase homolog","-","-","ATPase activator activity [GO:0001671]; chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]"]
[null,"Vradi08g01740",2682855,2690641,"protein trichome birefringence","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g01750",2699401,2700660,"-","-","-","-"]
[null,"Vradi08g01760",2752614,2755087,"Growth-regulating factor","developmental process [GO:0032502]; transcription, DNA-templated [GO:0006351]","nucleus [GO:0005634]","ATP binding [GO:0005524]"]
[null,"Vradi08g01770",2801253,2803253,"probable L-type lectin-domain containing receptor kinase S.5","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]"]
[null,"Vradi08g01780",2807323,2807789,"-","-","-","-"]
[null,"Vradi08g01790",2821228,2823240,"probable L-type lectin-domain containing receptor kinase S.5","-","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","ATP binding [GO:0005524]; carbohydrate binding [GO:0030246]; protein kinase activity [GO:0004672]"]
[null,"Vradi08g01800",2833009,2836091,"nudix hydrolase 23, chloroplastic isoform X2","-","-","hydrolase activity [GO:0016787]"]
[null,"Vradi08g01810",2837787,2843272,"-","-","-","-"]
[null,"Vradi08g01820",2840227,2842753,"-","-","-","-"]
[null,"Vradi08g01830",2849129,2853008,"Protein-serine/threonine phosphatase (EC 3.1.3.16)","-","-","metal ion binding [GO:0046872]; protein serine phosphatase activity [GO:0106306]; protein threonine phosphatase activity [GO:0106307]"]
[null,"Vradi08g01840",2873954,2874499,"uncharacterized protein LOC106757496","-","-","-"]
[null,"Vradi08g01850",2880654,2886259,"probable plastid-lipid-associated protein 13, chloroplastic isoform X2","-","-","-"]
[null,"Vradi08g01860",2890241,2891234,"VQ motif-containing protein 17","-","nucleus [GO:0005634]","-"]
[null,"Vradi08g01870",2919443,2922097,"omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 isoform X1","lipid metabolic process [GO:0006629]","integral component of membrane [GO:0016021]","oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [GO:0016717]"]
[null,"Vradi08g01880",2923801,2924589,"18 kDa seed maturation protein","embryo development ending in seed dormancy [GO:0009793]","-","-"]
[null,"Vradi08g01890",2926674,2926874,"-","-","-","-"]
[null,"Vradi08g01900",2935460,2951953,"protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X2","-","nucleus [GO:0005634]","ATP binding [GO:0005524]; nucleosome-dependent ATPase activity [GO:0070615]"]
[null,"Vradi08g01910",2972040,2972537,"uncharacterized protein LOC106769866","-","-","-"]
[null,"Vradi08g01920",2978367,2980318,"-","-","-","-"]
[null,"Vradi08g01930",2978456,2984559,"protein EMSY-LIKE 1 isoform X2","defense response to fungus [GO:0050832]","nucleus [GO:0005634]","-"]
[null,"Vradi08g01940",3014863,3015117,"-","-","-","-"]
["Chr8:30780001-30920000","Vradi08g11450",30784052,30785523,"-","-","-","-"]
[null,"Vradi08g11460",30789993,30796523,"uncharacterized protein LOC106755904","-","-","-"]
[null,"Vradi08g11470",30798011,30798223,"uncharacterized protein LOC106771579","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g11480",30802237,30807091,"rhodanese-like domain-containing protein 6","-","-","-"]
[null,"Vradi08g11490",30807816,30819900,"intermediate cleaving peptidase 55, mitochondrial isoform X2","-","-","manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]"]
[null,"Vradi08g11500",30825851,30826466,"uncharacterized protein LOC106757663","-","-","-"]
[null,"Vradi08g11510",30833295,30834345,"-","-","-","-"]
[null,"Vradi08g11520",30841970,30846556,"Alkaline/neutral invertase (EC 3.2.1.26)","sucrose catabolic process [GO:0005987]","-","glycopeptide alpha-N-acetylgalactosaminidase activity [GO:0033926]; sucrose alpha-glucosidase activity [GO:0004575]"]
[null,"Vradi08g11530",30854357,30856914,"60S ribosomal protein L5-2","translation [GO:0006412]","ribosome [GO:0005840]","5S rRNA binding [GO:0008097]; structural constituent of ribosome [GO:0003735]"]
[null,"Vradi08g11540",30857553,30858000,"-","-","-","-"]
[null,"Vradi08g11550",30860739,30863391,"AP-3 complex subunit mu isoform X1","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","clathrin adaptor complex [GO:0030131]","-"]
[null,"Vradi08g11560",30864113,30868404,"Golgi apparatus membrane protein TVP23","-","Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]","-"]
[null,"Vradi08g11570",30871622,30872863,"Hexosyltransferase (EC 2.4.1.-)","galactose metabolic process [GO:0006012]","cytoplasm [GO:0005737]","inositol 3-alpha-galactosyltransferase activity [GO:0047216]"]
[null,"Vradi08g11580",30873708,30875507,"ABC transporter I family member 20","-","-","ATP binding [GO:0005524]"]
[null,"Vradi08g11590",30877325,30883249,"WAT1-related protein","-","integral component of membrane [GO:0016021]","transmembrane transporter activity [GO:0022857]"]
[null,"Vradi08g11600",30893642,30899369,"uncharacterized protein LOC106772614","-","cytosol [GO:0005829]","pyroglutamyl-peptidase activity [GO:0016920]"]
[null,"Vradi08g11610",30910490,30910836,"zinc finger CCCH domain-containing protein 3","-","-","DNA binding [GO:0003677]; zinc ion binding [GO:0008270]"]
[null,"Vradi08g11620",30911687,30916129,"Non-specific serine/threonine protein kinase (EC 2.7.11.1)","-","-","ATP binding [GO:0005524]; protein serine kinase activity [GO:0106310]; protein threonine kinase activity [GO:0106311]"]
[null,"Vradi08g11630",30917588,30917836,"-","-","-","-"]
["Chr9:1-160000","Vradi09g00010",753,3718,"2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (EC 2.1.1.201) (Ubiquinone biosynthesis methyltransferase COQ5)","methylation [GO:0032259]; ubiquinone biosynthetic process [GO:0006744]","extrinsic component of mitochondrial inner membrane [GO:0031314]","2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity [GO:0043333]"]
[null,"Vradi09g00020",4175,15718,"F-box/LRR-repeat protein 14","-","-","-"]
[null,"Vradi09g00030",17790,26237,"-","-","-","-"]
[null,"Vradi09g00040",38250,38870,"uncharacterized protein LOC106773767","-","-","-"]
[null,"Vradi09g00050",40485,44731,"mediator of RNA polymerase II transcription subunit 15a isoform X3","-","-","-"]
[null,"Vradi09g00060",59594,63414,"uncharacterized protein LOC106773047","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi09g00070",68127,69827,"putative UPF0481 protein At3g02645","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi09g00080",82317,86380,"transcription factor bHLH18","-","nucleus [GO:0005634]","protein dimerization activity [GO:0046983]"]
[null,"Vradi09g00090",126797,128257,"LOW QUALITY PROTEIN: 28S ribosomal protein S15, mitochondrial-like","translation [GO:0006412]","ribosome [GO:0005840]","structural constituent of ribosome [GO:0003735]"]
[null,"Vradi09g00100",129102,131203,"-","-","-","-"]
[null,"Vradi09g00110",135072,139118,"cinnamoyl-CoA reductase 1 isoform X1","-","-","catalytic activity [GO:0003824]"]
[null,"Vradi09g00120",140847,142517,"F-box/LRR-repeat protein 2","-","-","-"]
[null,"Vradi09g00130",144592,146325,"F-box/LRR-repeat protein 4","-","-","-"]
["Chr9:480001-580000","Vradi09g00590",486679,490993,"uncharacterized protein LOC106772977","-","-","catalytic activity [GO:0003824]"]
[null,"Vradi09g00600",491938,494163,"pentatricopeptide repeat-containing protein At2g20540","-","-","-"]
[null,"Vradi09g00610",502719,505921,"-","-","-","-"]
[null,"Vradi09g00620",507750,510654,"Mediator of RNA polymerase II transcription subunit 7","regulation of transcription by RNA polymerase II [GO:0006357]","mediator complex [GO:0016592]","transcription coregulator activity [GO:0003712]"]
[null,"Vradi09g00630",512252,516746,"uncharacterized protein LOC106760799","-","-","ubiquitin binding [GO:0043130]"]
[null,"Vradi09g00640",541601,543232,"palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic","fatty acid biosynthetic process [GO:0006633]","integral component of membrane [GO:0016021]","oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [GO:0016717]"]
[null,"Vradi09g00650",546703,548572,"histidine-containing phosphotransfer protein 1","cytokinin-activated signaling pathway [GO:0009736]; phosphorelay signal transduction system [GO:0000160]","cytosol [GO:0005829]","-"]
[null,"Vradi09g00660",561087,561887,"protein LURP-one-related 5","-","-","-"]
[null,"Vradi09g00670",565543,567307,"(1->3)-beta-glucan endohydrolase (EC 3.2.1.39) (Beta-1,3-endoglucanase)","carbohydrate metabolic process [GO:0005975]","integral component of membrane [GO:0016021]","glucan endo-1,3-beta-D-glucosidase activity [GO:0042973]"]
[null,"Vradi09g00680",568657,571348,"methyl-CpG-binding domain-containing protein 11","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi09g00690",574828,580333,"uncharacterized protein LOC106774172","-","-","-"]
["Chr9:740001-940000","Vradi09g00980",741025,744105,"uncharacterized protein LOC106774146","-","-","-"]
[null,"Vradi09g00990",750327,757531,"-","-","-","-"]
[null,"Vradi09g01000",762077,769968,"probable inactive 2-oxoglutarate-dependent dioxygenase AOP2","-","-","dioxygenase activity [GO:0051213]; metal ion binding [GO:0046872]"]
[null,"Vradi09g01010",788778,792862,"Katanin p60 ATPase-containing subunit A1 (Katanin p60 subunit A1) (EC 5.6.1.1) (p60 katanin)","-","cytoplasm [GO:0005737]; microtubule [GO:0005874]","ATP binding [GO:0005524]; isomerase activity [GO:0016853]; microtubule binding [GO:0008017]; microtubule-severing ATPase activity [GO:0008568]"]
[null,"Vradi09g01020",802324,806845,"B-like cyclin","cell cycle [GO:0007049]; cell division [GO:0051301]","-","-"]
[null,"Vradi09g01030",810621,813398,"Auxin-induced protein 22A (Indole-3-acetic acid-induced protein ARG3)","auxin-activated signaling pathway [GO:0009734]; regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","-"]
[null,"Vradi09g01040",822156,834615,"N-terminal acetyltransferase A complex auxiliary subunit NAA15","-","-","transferase activity [GO:0016740]"]
[null,"Vradi09g01050",850197,851261,"F-box/kelch-repeat protein At1g80440","-","-","-"]
[null,"Vradi09g01060",853122,856133,"uncharacterized protein LOC106773827 isoform X2","-","integral component of membrane [GO:0016021]","transferase activity, transferring glycosyl groups [GO:0016757]"]
[null,"Vradi09g01070",858367,861674,"protein MLN51 homolog","mRNA processing [GO:0006397]; mRNA transport [GO:0051028]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; regulation of translation [GO:0006417]; RNA splicing [GO:0008380]","cytoplasm [GO:0005737]; nucleus [GO:0005634]","RNA binding [GO:0003723]"]
[null,"Vradi09g01080",863273,871238,"Coatomer subunit beta'","intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]","COPI-coated vesicle membrane [GO:0030663]; Golgi membrane [GO:0000139]; membrane coat [GO:0030117]","structural molecule activity [GO:0005198]"]
[null,"Vradi09g01090",874488,876706,"Protein TIC 20","-","chloroplast inner membrane [GO:0009706]; integral component of membrane [GO:0016021]","-"]
[null,"Vradi09g01100",887019,890950,"probable sulfate transporter 3.4","-","integral component of membrane [GO:0016021]","secondary active sulfate transmembrane transporter activity [GO:0008271]"]
[null,"Vradi09g01110",891455,896104,"protein SYS1 homolog isoform X2","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi09g01120",898095,901763,"probable inactive nicotinamidase At3g16190","-","-","-"]
[null,"Vradi09g01130",904842,909558,"heat shock 70 kDa protein 15","-","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]"]
[null,"Vradi09g01140",912237,913170,"Transcription repressor (Ovate family protein)","negative regulation of transcription, DNA-templated [GO:0045892]","nucleus [GO:0005634]","-"]
[null,"Vradi09g01150",917932,919598,"uncharacterized protein LOC106773961","-","-","-"]
[null,"Vradi09g01160",927512,931133,"uncharacterized protein LOC106773036 isoform X1","protein transport [GO:0015031]","-","-"]
[null,"Vradi09g01170",934690,953010,"exosome complex component RRP43","-","-","-"]
["Chr9:5940001-6540000","Vradi09g04270",5942877,5946358,"Glycosyltransferase (EC 2.4.1.-)","-","-","UDP-glycosyltransferase activity [GO:0008194]"]
[null,"Vradi09g04280",5962835,5965158,"-","-","-","-"]
[null,"Vradi09g04290",5976164,5985455,"ferric reduction oxidase 2-like","-","integral component of membrane [GO:0016021]","metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]"]
[null,"Vradi09g04300",6032796,6042953,"uncharacterized protein LOC106773851","-","-","-"]
[null,"Vradi09g04310",6073911,6074387,"7,8-dihydroneopterin aldolase (EC 4.1.2.25)","folic acid biosynthetic process [GO:0046656]; tetrahydrofolate biosynthetic process [GO:0046654]","-","dihydroneopterin aldolase activity [GO:0004150]"]
[null,"Vradi09g04320",6079998,6087934,"WD repeat-containing protein 74 isoform X2","ribosomal large subunit biogenesis [GO:0042273]","nucleolus [GO:0005730]","-"]
[null,"Vradi09g04330",6087358,6104055,"-","-","-","-"]
[null,"Vradi09g04340",6111194,6114664,"calmodulin-binding receptor-like cytoplasmic kinase 2 isoform X1","-","-","ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]"]
[null,"Vradi09g04350",6128657,6128965,"-","-","-","-"]
[null,"Vradi09g04360",6129001,6129726,"-","-","-","-"]
[null,"Vradi09g04370",6136707,6140499,"pentatricopeptide repeat-containing protein At2g46050, mitochondrial","-","-","-"]
[null,"Vradi09g04380",6143872,6144153,"-","-","-","-"]
[null,"Vradi09g04390",6149318,6150011,"-","-","-","-"]
[null,"Vradi09g04400",6154033,6156111,"-","-","-","-"]
[null,"Vradi09g04410",6185691,6190224,"AT-rich interactive domain-containing protein 1 isoform X1","-","nucleus [GO:0005634]","DNA binding [GO:0003677]"]
[null,"Vradi09g04420",6204795,6207336,"ubiquitin-conjugating enzyme E2-23 kDa","-","-","ATP binding [GO:0005524]; transferase activity [GO:0016740]"]
[null,"Vradi09g04430",6211523,6224560,"probable global transcription activator SNF2L2 isoform X2","ATP-dependent chromatin remodeling [GO:0043044]; regulation of gene expression, epigenetic [GO:0040029]; regulation of transcription, DNA-templated [GO:0006355]","nucleus [GO:0005634]","ATP binding [GO:0005524]; DNA-dependent ATPase activity [GO:0008094]; nucleosome-dependent ATPase activity [GO:0070615]"]
[null,"Vradi09g04440",6271834,6276223,"glycerol-3-phosphate 2-O-acyltransferase 4","-","-","transferase activity, transferring acyl groups [GO:0016746]"]
[null,"Vradi09g04450",6290029,6303991,"SKP1-like protein 21 isoform X3","protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]","nucleus [GO:0005634]","-"]
[null,"Vradi09g04460",6306493,6314926,"signal peptide peptidase-like 4","-","endosome membrane [GO:0010008]; integral component of membrane [GO:0016021]","aspartic-type endopeptidase activity [GO:0004190]"]
[null,"Vradi09g04470",6342631,6348052,"-","-","-","-"]
[null,"Vradi09g04480",6358097,6363051,"uncharacterized protein LOC106773208","chromosome organization involved in meiotic cell cycle [GO:0070192]; plant-type sporogenesis [GO:0048236]","-","-"]
[null,"Vradi09g04490",6379698,6384878,"uncharacterized protein LOC106774183 isoform X2","-","-","-"]
[null,"Vradi09g04500",6390119,6406206,"mediator of RNA polymerase II transcription subunit 12","regulation of transcription by RNA polymerase II [GO:0006357]","mediator complex [GO:0016592]","transcription coregulator activity [GO:0003712]"]
[null,"Vradi09g04510",6407218,6408111,"protein KTI12 homolog isoform X2","-","-","ATP binding [GO:0005524]"]
[null,"Vradi09g04520",6433021,6436293,"rop guanine nucleotide exchange factor 3","-","-","guanyl-nucleotide exchange factor activity [GO:0005085]"]
[null,"Vradi09g04530",6440132,6440652,"elicitor-responsive protein 3","-","-","-"]
[null,"Vradi09g04540",6468142,6470226,"transcription factor EGL1 isoform X2","-","-","-"]
[null,"Vradi09g04550",6483541,6495730,"uncharacterized protein LOC106774229 isoform X2","lipid catabolic process [GO:0016042]","-","-"]
[null,"Vradi09g04560",6506475,6514744,"uncharacterized protein LOC106772966","acyl-CoA metabolic process [GO:0006637]","-","acyl-CoA hydrolase activity [GO:0047617]"]
[null,"Vradi09g04570",6515860,6518829,"F-box/kelch-repeat protein SKIP4","-","-","-"]
["Chr9:6600001-6780000","Vradi09g04600",6613740,6624589,"MATH domain and coiled-coil domain-containing protein At3g58360-like","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi09g04610",6644635,6647031,"Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (HTP reductase) (Riboflavin-specific deaminase)","riboflavin biosynthetic process [GO:0009231]","-","diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [GO:0008835]; zinc ion binding [GO:0008270]"]
[null,"Vradi09g04620",6649182,6651774,"uncharacterized protein LOC106773871","-","-","-"]
[null,"Vradi09g04630",6663390,6666897,"UPF0187 protein At3g61320, chloroplastic","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi09g04640",6669420,6674447,"probable serine/threonine-protein kinase At5g41260","-","plasma membrane [GO:0005886]","ATP binding [GO:0005524]; protein kinase activity [GO:0004672]"]
[null,"Vradi09g04650",6705075,6711234,"AT-hook motif nuclear-localized protein","-","nucleus [GO:0005634]","minor groove of adenine-thymine-rich DNA binding [GO:0003680]"]
[null,"Vradi09g04660",6713025,6714155,"F-box protein At4g22280","-","-","-"]
[null,"Vradi09g04670",6728436,6729002,"ripening-related protein 3-like","-","-","-"]
[null,"Vradi09g04680",6742520,6745342,"cytochrome P450 72A15","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
[null,"Vradi09g04690",6774222,6776354,"cytochrome P450 72A15-like","-","integral component of membrane [GO:0016021]","heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]"]
["Chr10:20180001-20380000","Vradi10g12730",20190983,20192780,"Cytochrome b-c1 complex subunit 6","mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]","mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]","ubiquinol-cytochrome-c reductase activity [GO:0008121]"]
[null,"Vradi10g12740",20194574,20199626,"serine decarboxylase isoform X1","carboxylic acid metabolic process [GO:0019752]","-","carboxy-lyase activity [GO:0016831]; pyridoxal phosphate binding [GO:0030170]"]
[null,"Vradi10g12750",20247720,20250912,"Tubby-like F-box protein","-","-","-"]
[null,"Vradi10g12760",20254300,20255451,"uncharacterized protein LOC106774526","-","-","-"]
[null,"Vradi10g12770",20257017,20262493,"protein FAM135B isoform X2","-","-","-"]
[null,"Vradi10g12780",20270145,20273915,"Bidirectional sugar transporter SWEET","carbohydrate transport [GO:0008643]","integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]","-"]
[null,"Vradi10g12790",20278704,20279597,"fasciclin-like arabinogalactan protein 19","-","-","-"]
[null,"Vradi10g12800",20281665,20283621,"-","-","-","-"]
[null,"Vradi10g12810",20285059,20287622,"-","-","-","-"]
[null,"Vradi10g12820",20294023,20297302,"kinetochore protein NDC80 homolog isoform X2","attachment of mitotic spindle microtubules to kinetochore [GO:0051315]; cell division [GO:0051301]","Ndc80 complex [GO:0031262]","-"]
[null,"Vradi10g12830",20298250,20312300,"Separase (EC 3.4.22.49)","chromosome segregation [GO:0007059]","nucleus [GO:0005634]","cysteine-type endopeptidase activity [GO:0004197]"]
[null,"Vradi10g12840",20318941,20323184,"3-ketoacyl-CoA synthase (EC 2.3.1.-)","fatty acid biosynthetic process [GO:0006633]","membrane [GO:0016020]","3-oxo-arachidoyl-CoA synthase activity [GO:0102336]; 3-oxo-cerotoyl-CoA synthase activity [GO:0102337]; 3-oxo-lignoceronyl-CoA synthase activity [GO:0102338]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]"]
[null,"Vradi10g12850",20323286,20327323,"transmembrane protein 87B","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g12860",20346942,20347487,"protein SUPPRESSOR OF GENE SILENCING 3 homolog","defense response to virus [GO:0051607]; gene silencing by RNA [GO:0031047]","-","-"]
[null,"Vradi10g12870",20349239,20355040,"sterol 3-beta-glucosyltransferase","-","integral component of membrane [GO:0016021]","transferase activity [GO:0016740]"]
[null,"Vradi10g12880",20365248,20365640,"basic blue protein-like","-","-","electron transfer activity [GO:0009055]"]
[null,"Vradi10g12890",20375998,20381415,"Patatin (EC 3.1.1.-)","lipid catabolic process [GO:0016042]","-","hydrolase activity [GO:0016787]"]
["Chr10:20400001-20500000","Vradi10g12910",20404338,20405551,"uncharacterized protein LOC106765827","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g12920",20407397,20411047,"increased DNA methylation 3 isoform X1","-","-","-"]
[null,"Vradi10g12930",20413674,20414725,"probable E3 ubiquitin-protein ligase RHC1A","-","-","-"]
[null,"Vradi10g12940",20417440,20422070,"protein RETICULATA-RELATED 1, chloroplastic","-","chloroplast membrane [GO:0031969]","-"]
[null,"Vradi10g12950",20422307,20423487,"Very-long-chain 3-oxoacyl-CoA synthase (EC 2.3.1.199)","fatty acid biosynthetic process [GO:0006633]","integral component of membrane [GO:0016021]","3-oxo-arachidoyl-CoA synthase activity [GO:0102336]; 3-oxo-cerotoyl-CoA synthase activity [GO:0102337]; 3-oxo-lignoceronyl-CoA synthase activity [GO:0102338]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]"]
[null,"Vradi10g12960",20433391,20435087,"-","-","-","-"]
[null,"Vradi10g12970",20434979,20444088,"uncharacterized protein LOC106775749 isoform X1","-","integral component of membrane [GO:0016021]","-"]
[null,"Vradi10g12980",20446200,20449270,"probable plastid-lipid-associated protein 4, chloroplastic","-","-","-"]
[null,"Vradi10g12990",20450048,20452286,"F-box protein At1g10780","-","-","-"]
[null,"Vradi10g13000",20454051,20454789,"-","-","-","-"]
[null,"Vradi10g13010",20462457,20467463,"uncharacterized protein At1g10890","-","-","-"]
[null,"Vradi10g13020",20489677,20492405,"uncharacterized protein LOC106775189","-","Golgi apparatus [GO:0005794]","carbohydrate binding [GO:0030246]; oxidoreductase activity [GO:0016491]"]
[null,"Vradi10g13030",20494629,20499077,"cell division control protein 48 homolog C","cell division [GO:0051301]","-","ATPase activity [GO:0016887]; ATP binding [GO:0005524]"]

{"sheet":"Table S14","index":13,"n_rows":8,"n_cols":11,"rows_kept":8,"merged":[[2,0,3,0],[5,0,7,0]],"flags":["formulas_cached_only"]}
["Supplementary Table 14 Phenotyping details of 558 mungbean accessions in various environments. √ indicates that this trait has been phenotyped in this environment"]
["Year","Location","Days to Flowering Time","Plant Height","Branch Number","Pod Length","Pod Width","Seeds per Pod","100-Seed Weight","Seed Protein content","Seed Starch content"]
[2019,"Ezhou","√",null,null,"√","√","√","√","√","√"]
[null,"Lingshui","√","√",null,"√","√","√","√"]
[2020,"Lingshui",{"$nulls":3},"√","√","√","√"]
[2021,"Wuhan","√","√","√","√","√","√","√"]
[null,"Ezhou","√","√","√","√","√","√"]
[null,"Gucheng","√","√","√","√","√","√","√"]

{"sheet":"Table S15","index":14,"n_rows":39,"n_cols":10,"rows_kept":39,"flags":["formulas_cached_only"]}
["Supplemetary Table 15 Statistics of all the phenotypic data for the traits studied"]
["Traits","Location","Year","Minimum","25% Percentile","Median","75% Percentile","Maximum","Mean","Std. Deviation"]
["Days to flowering time","Ezhou",2019,{"v":34,"d":"34.00"},{"v":40,"d":"40.00"},{"v":42,"d":"42.00"},{"v":45.5,"d":"45.50"},{"v":67,"d":"67.00"},{"v":43.165770609319,"d":"43.17"},{"v":5.509322313083505,"d":"5.51"}]
["Days to flowering time","Lingshui",2019,{"v":35,"d":"35.00"},{"v":37.5,"d":"37.50"},{"v":39.5,"d":"39.50"},{"v":41.5,"d":"41.50"},{"v":49,"d":"49.00"},{"v":39.659498207885306,"d":"39.66"},{"v":2.61617145254608,"d":"2.62"}]
["Days to flowering time","Wuhan",2021,{"v":46,"d":"46.00"},{"v":51,"d":"51.00"},{"v":54.5,"d":"54.50"},{"v":56.5,"d":"56.50"},{"v":66,"d":"66.00"},{"v":53.92908438061041,"d":"53.93"},{"v":3.790358089666868,"d":"3.79"}]
["Days to flowering time","Ezhou",2021,{"v":26,"d":"26.00"},{"v":36,"d":"36.00"},{"v":38,"d":"38.00"},{"v":41,"d":"41.00"},{"v":52,"d":"52.00"},{"v":38.39236790606654,"d":"38.39"},{"v":4.640630500357718,"d":"4.64"}]
["Days to flowering time","Gucheng",2021,{"v":35,"d":"35.00"},{"v":41,"d":"41.00"},{"v":42.5,"d":"42.50"},{"v":43.5,"d":"43.50"},{"v":45.5,"d":"45.50"},{"v":41.97491039426523,"d":"41.97"},{"v":1.886667169405984,"d":"1.89"}]
["Pod length","Ezhou",2019,5.55,{"v":8.66666666666667,"d":"8.67"},{"v":9.354166666666664,"d":"9.35"},10.25,{"v":15.4416666666667,"d":"15.44"},{"v":9.481939448441246,"d":"9.48"},{"v":1.3040070417353855,"d":"1.30"}]
["Pod length","Lingshui",2019,{"v":4.79166666666667,"d":"4.79"},{"v":7.635416666666665,"d":"7.64"},{"v":8.29166666666667,"d":"8.29"},{"v":8.931249999999999,"d":"8.93"},{"v":12.775,"d":"12.78"},{"v":8.38411290322581,"d":"8.38"},{"v":1.1957769024177736,"d":"1.20"}]
["Pod length","Lingshui",2020,{"v":3.66666666666667,"d":"3.67"},{"v":5.85416666666667,"d":"5.85"},{"v":6.538888888888884,"d":"6.54"},{"v":7.22222222222222,"d":"7.22"},{"v":11.0666666666667,"d":"11.07"},{"v":6.5767486724905755,"d":"6.58"},{"v":1.0816845494932419,"d":"1.08"}]
["Pod length","Wuhan",2021,{"v":4.83333333333333,"d":"4.83"},8.08,8.81,{"v":9.555,"d":"9.56"},{"v":14.045,"d":"14.05"},{"v":8.911220713570716,"d":"8.91"},{"v":1.2637805978453103,"d":"1.26"}]
["Pod length","Ezhou",2021,4.35,{"v":7.81625,"d":"7.82"},{"v":8.51130952380953,"d":"8.51"},9.42,{"v":14.0625,"d":"14.06"},{"v":8.594866190476193,"d":"8.59"},{"v":1.2509426554934886,"d":"1.25"}]
["Pod length","Gucheng",2021,5.28,{"v":7.44666666666667,"d":"7.45"},{"v":8.1525,"d":"8.15"},{"v":9.186250000000001,"d":"9.19"},{"v":12.4833333333333,"d":"12.48"},{"v":8.326846380038827,"d":"8.33"},{"v":1.2808158958586715,"d":"1.28"}]
["Pod width","Ezhou",2019,{"v":3.9,"d":"3.90"},5.17,{"v":5.42083333333333,"d":"5.42"},{"v":5.78083333333333,"d":"5.78"},{"v":7.79916666666667,"d":"7.80"},{"v":5.532983122362865,"d":"5.53"},{"v":0.6119341569614942,"d":"0.61"}]
["Pod width","Lingshui",2019,{"v":3.86916666666667,"d":"3.87"},{"v":4.582708333333333,"d":"4.58"},{"v":4.90291666666667,"d":"4.90"},{"v":5.252291666666668,"d":"5.25"},{"v":6.435,"d":"6.44"},{"v":4.929753584229393,"d":"4.93"},{"v":0.46043738287076585,"d":"0.46"}]
["Pod width","Lingshui",2020,{"v":2.42444444444444,"d":"2.42"},{"v":3.7955555555555573,"d":"3.80"},{"v":4.38666666666667,"d":"4.39"},{"v":5.0452083333333295,"d":"5.05"},{"v":10.5677777777778,"d":"10.57"},{"v":4.451980422804614,"d":"4.45"},{"v":0.8905186857145225,"d":"0.89"}]
["Pod width","Wuhan",2021,3.63,{"v":4.915,"d":"4.92"},{"v":5.1815,"d":"5.18"},{"v":5.4717,"d":"5.47"},{"v":6.565,"d":"6.57"},{"v":5.193034004719,"d":"5.19"},{"v":0.42419074684140806,"d":"0.42"}]
["Pod width","Ezhou",2021,{"v":3.415,"d":"3.42"},{"v":4.537125,"d":"4.54"},{"v":4.758,"d":"4.76"},{"v":5.055125,"d":"5.06"},{"v":6.148,"d":"6.15"},{"v":4.7952310779220735,"d":"4.80"},{"v":0.4084630092934409,"d":"0.41"}]
["Pod width","Gucheng",2021,{"v":2.95111111111111,"d":"2.95"},{"v":3.9544722222222224,"d":"3.95"},{"v":4.194333333333335,"d":"4.19"},{"v":4.463,"d":"4.46"},{"v":5.452,"d":"5.45"},{"v":4.211345612795482,"d":"4.21"},{"v":0.38544285345129337,"d":"0.39"}]
["Seeds per pod","Ezhou",2019,{"v":9.33333333333333,"d":"9.33"},{"v":11.3333333333333,"d":"11.33"},{"v":11.8333333333333,"d":"11.83"},{"v":12.3333333333333,"d":"12.33"},{"v":16.1666666666667,"d":"16.17"},{"v":11.866696588868942,"d":"11.87"},{"v":0.9336884276023033,"d":"0.93"}]
["Seeds per pod","Lingshui",2019,7.75,{"v":10.437500000000025,"d":"10.44"},{"v":11.0833333333333,"d":"11.08"},{"v":11.6666666666667,"d":"11.67"},{"v":15.6666666666667,"d":"15.67"},{"v":11.1097670250896,"d":"11.11"},{"v":1.1195320318601567,"d":"1.12"}]
["Seeds per pod","Lingshui",2020,{"v":2.28571428571429,"d":"2.29"},{"v":7.33333333333333,"d":"7.33"},{"v":8.44444444444444,"d":"8.44"},{"v":9.77777777777778,"d":"9.78"},{"v":12.7777777777778,"d":"12.78"},{"v":8.394505110197558,"d":"8.39"},{"v":1.771874230861832,"d":"1.77"}]
["Seeds per pod","Wuhan",2021,{"v":6.98333333333334,"d":"6.98"},10.65,11.45,12.05,{"v":15.3,"d":"15.30"},{"v":11.354676462176457,"d":"11.35"},{"v":1.1537487074665833,"d":"1.15"}]
["Seeds per pod","Ezhou",2021,{"v":4.5,"d":"4.50"},{"v":10.2,"d":"10.20"},{"v":10.8,"d":"10.80"},{"v":11.36249999999995,"d":"11.36"},14.45,{"v":10.759868686868682,"d":"10.76"},{"v":1.1062284500086226,"d":"1.11"}]
["Seeds per pod","Gucheng",2021,{"v":8.5,"d":"8.50"},{"v":11.79375,"d":"11.79"},12.45,{"v":13,"d":"13.00"},16.95,{"v":12.40092640173575,"d":"12.40"},{"v":1.0920740788392673,"d":"1.09"}]
["100-seed weight","Ezhou",2019,{"v":2.01333333333333,"d":"2.01"},4.53,{"v":5.175,"d":"5.18"},{"v":6.05166666666667,"d":"6.05"},{"v":9.595,"d":"9.60"},{"v":5.28366397366846,"d":"5.28"},{"v":1.2072796413163185,"d":"1.21"}]
["100-seed weight","Lingshui",2019,{"v":1.6,"d":"1.60"},{"v":3.7787499999999996,"d":"3.78"},{"v":4.436666666666666,"d":"4.44"},{"v":5.248333333333335,"d":"5.25"},{"v":8.72666666666667,"d":"8.73"},{"v":4.535318863030062,"d":"4.54"},{"v":1.097388706745584,"d":"1.10"}]
["100-seed weight","Lingshui",2020,{"v":1.725,"d":"1.73"},{"v":3.87833333333333,"d":"3.88"},{"v":4.450833333333335,"d":"4.45"},{"v":5.144583333333332,"d":"5.14"},{"v":7.32666666666667,"d":"7.33"},{"v":4.4896893667861475,"d":"4.49"},{"v":0.9885313553737126,"d":"0.99"}]
["100-seed weight","Wuhan",2021,{"v":2.00833333333333,"d":"2.01"},{"v":4.130833333333335,"d":"4.13"},{"v":4.73333333333333,"d":"4.73"},{"v":5.463333333333335,"d":"5.46"},{"v":8.88333333333333,"d":"8.88"},{"v":4.821993769470402,"d":"4.82"},{"v":0.9599361139502003,"d":"0.96"}]
["100-seed weight","Gucheng",2021,{"v":1.33166666666667,"d":"1.33"},{"v":3.1616666666666653,"d":"3.16"},3.65,{"v":4.32166666666667,"d":"4.32"},5.89,{"v":3.7281861861861856,"d":"3.73"},{"v":0.8185112113208538,"d":"0.82"}]
["Plant height","Lingshui",2019,{"v":12.7916666666667,"d":"12.79"},{"v":22.879464285714274,"d":"22.88"},{"v":27.4519841269841,"d":"27.45"},{"v":32.9375,"d":"32.94"},49.15,{"v":28.01738244580987,"d":"28.02"},{"v":6.841075176506679,"d":"6.84"}]
["Plant height","Wuhan",2021,{"v":14.3,"d":"14.30"},{"v":36.4870129870129,"d":"36.49"},{"v":43.1875,"d":"43.19"},{"v":51.2301587301587,"d":"51.23"},{"v":77.0288461538462,"d":"77.03"},{"v":44.48146329408672,"d":"44.48"},{"v":11.399409373941518,"d":"11.40"}]
["Plant height","Ezhou",2021,{"v":63.9,"d":"63.90"},{"v":85.7375,"d":"85.74"},93.05,{"v":99.61250000000001,"d":"99.61"},{"v":132.8,"d":"132.80"},{"v":93.17723765432102,"d":"93.18"},{"v":11.471916395338878,"d":"11.47"}]
["Plant height","Gucheng",2021,39.75,{"v":69.675,"d":"69.68"},79.85,88.85,{"v":127,"d":"127.00"},{"v":79.15343179162745,"d":"79.15"},{"v":15.109906755906934,"d":"15.11"}]
["Branch number","Wuhan",2021,{"v":0,"d":"0.00"},1.25,{"v":1.72727272727272,"d":"1.73"},2.25,{"v":8,"d":"8.00"},{"v":1.8254990620789542,"d":"1.83"},{"v":0.8633804120281052,"d":"0.86"}]
["Branch number","Ezhou",2021,{"v":2,"d":"2.00"},{"v":4.125,"d":"4.13"},{"v":4.7875,"d":"4.79"},{"v":5.3,"d":"5.30"},{"v":8.83333333333334,"d":"8.83"},{"v":4.727365278846427,"d":"4.73"},{"v":0.9340042681626745,"d":"0.93"}]
["Branch number","Gucheng",2021,{"v":1.8,"d":"1.80"},2.65,{"v":3,"d":"3.00"},3.35,5.45,{"v":3.0263316407805627,"d":"3.03"},{"v":0.5110351482402128,"d":"0.51"}]
["Seed protein content","Ezhou",2019,{"v":19.064999999999998,"d":"19.07"},23.61,{"v":24.105,"d":"24.11"},24.55,26.93,{"v":24.078438061041297,"d":"24.08"},{"v":0.8322840540382263,"d":"0.83"}]
["Seed starch content","Ezhou",2019,46.27,{"v":48.675,"d":"48.68"},{"v":49.125,"d":"49.13"},{"v":49.555,"d":"49.56"},{"v":52.9,"d":"52.90"},{"v":49.1276536312849,"d":"49.13"},{"v":0.80266881515343,"d":"0.80"}]

{"sheet":"Table S16","index":15,"n_rows":112,"n_cols":8,"rows_kept":112,"flags":["formulas_cached_only"]}
["Supplemetary Table 16 SNPs associated with nine traits in mungbean population"]
["Traits","Environments","Chr","Position","REF","ALT","Allele frequency","-lg(P-value)"]
["Days to Flowering Time (DFT)","2019_EZ",2,1404159,"A","T",0.21,{"v":6.974283797448193,"d":"6.97"}]
["Days to Flowering Time (DFT)","2019_EZ",2,23895162,"A","G",{"v":0.144,"d":"0.14"},{"v":7.4441969837320565,"d":"7.44"}]
["Days to Flowering Time (DFT)","2019_EZ",5,3896838,"A","T",{"v":0.169,"d":"0.17"},{"v":6.617317249353512,"d":"6.62"}]
["Days to Flowering Time (DFT)","2019_LS",5,35404021,"C","T",{"v":0.177,"d":"0.18"},{"v":7.320461181662448,"d":"7.32"}]
["Days to Flowering Time (DFT)","2021_WH",5,10752448,"C","G",{"v":0.068,"d":"0.07"},{"v":7.421599201771572,"d":"7.42"}]
["Days to Flowering Time (DFT)","2021_EZ",3,7866319,"A","C",0.23,9.25]
["Days to Flowering Time (DFT)","2021_EZ",5,23755364,"C","A",{"v":0.109,"d":"0.11"},{"v":6.60009586943091,"d":"6.60"}]
["Days to Flowering Time (DFT)","2021_EZ",11,5061178,"A","G",{"v":0.111,"d":"0.11"},{"v":6.819986585522969,"d":"6.82"}]
["Days to Flowering Time (DFT)","2021_GC",1,5324156,"A","C",{"v":0.358,"d":"0.36"},{"v":6.93120803388517,"d":"6.93"}]
["Days to Flowering Time (DFT)","2021_GC",3,9987335,"A","G",0.15,8.43]
["Pod Length (PL)","2019_EZ",2,7258,"T","C",0.05,{"v":11.648096291912745,"d":"11.65"}]
["Pod Length (PL)","2019_EZ",5,463300,"C","T",{"v":0.055,"d":"0.06"},{"v":14.389459710213648,"d":"14.39"}]
["Pod Length (PL)","2019_LS",2,7258,"T","C",{"v":0.052,"d":"0.05"},{"v":9.036040282707472,"d":"9.04"}]
["Pod Length (PL)","2019_LS",5,463300,"C","T",{"v":0.056,"d":"0.06"},{"v":10.686159133250921,"d":"10.69"}]
["Pod Length (PL)","2019_LS",5,34051335,"A","G",{"v":0.144,"d":"0.14"},{"v":7.878071014709184,"d":"7.88"}]
["Pod Length (PL)","2019_LS",6,11351094,"T","G",{"v":0.125,"d":"0.13"},{"v":7.659362181465088,"d":"7.66"}]
["Pod Length (PL)","2019_LS",6,16095566,"A","G",{"v":0.055,"d":"0.06"},{"v":7.369635900767565,"d":"7.37"}]
["Pod Length (PL)","2019_LS",8,24723917,"A","G",{"v":0.093,"d":"0.09"},{"v":8.215871760023441,"d":"8.22"}]
["Pod Length (PL)","2019_LS",8,28252659,"A","G",{"v":0.072,"d":"0.07"},{"v":9.55806053447031,"d":"9.56"}]
["Pod Length (PL)","2019_LS",10,3562218,"T","C",{"v":0.126,"d":"0.13"},{"v":11.040977268425129,"d":"11.04"}]
["Pod Length (PL)","2019_LS",11,12816659,"G","T",0.11,{"v":6.661105448561645,"d":"6.66"}]
["Pod Length (PL)","2021_WH",5,497015,"T","C",{"v":0.068,"d":"0.07"},{"v":6.952343977683323,"d":"6.95"}]
["Pod Length (PL)","2021_WH",6,13410138,"G","A",{"v":0.053,"d":"0.05"},{"v":7.830111409903408,"d":"7.83"}]
["Pod Length (PL)","2021_EZ",1,18641699,"G","A",{"v":0.091,"d":"0.09"},{"v":8.04786525798611,"d":"8.05"}]
["Pod Length (PL)","2021_EZ",7,54801033,"T","C",{"v":0.052,"d":"0.05"},{"v":6.554371669925368,"d":"6.55"}]
["Pod Length (PL)","2021_EZ",10,4574547,"A","C",{"v":0.053,"d":"0.05"},{"v":6.522088325221691,"d":"6.52"}]
["Pod Length (PL)","2021_EZ",10,10071075,"G","T",{"v":0.065,"d":"0.07"},{"v":7.017585880440489,"d":"7.02"}]
["Pod Length (PL)","2021_GC",7,15537790,"A","T",{"v":0.124,"d":"0.12"},{"v":6.818365323653637,"d":"6.82"}]
["Pod Width (PW)","2019_EZ",1,5295897,"T","C",{"v":0.063,"d":"0.06"},{"v":6.978329107982089,"d":"6.98"}]
["Pod Width (PW)","2019_EZ",1,24860516,"T","A",{"v":0.489,"d":"0.49"},{"v":6.529247089499185,"d":"6.53"}]
["Pod Width (PW)","2019_EZ",2,24282269,"G","T",{"v":0.501,"d":"0.50"},{"v":6.9169896444658825,"d":"6.92"}]
["Pod Width (PW)","2019_EZ",3,12355802,"T","C",{"v":0.409,"d":"0.41"},{"v":8.341710362227063,"d":"8.34"}]
["Pod Width (PW)","2019_EZ",4,7146856,"A","G",{"v":0.138,"d":"0.14"},{"v":14.429512284405941,"d":"14.43"}]
["Pod Width (PW)","2019_EZ",5,34563736,"T","C",{"v":0.142,"d":"0.14"},{"v":17.94647519289257,"d":"17.95"}]
["Pod Width (PW)","2019_EZ",6,20582229,"T","C",{"v":0.105,"d":"0.11"},{"v":11.433079454520495,"d":"11.43"}]
["Pod Width (PW)","2019_EZ",6,34642336,"A","C",{"v":0.122,"d":"0.12"},{"v":8.359024722135247,"d":"8.36"}]
["Pod Width (PW)","2019_EZ",7,7366983,"A","G",0.13,{"v":10.256266325613206,"d":"10.26"}]
["Pod Width (PW)","2019_EZ",7,18946903,"A","G",{"v":0.124,"d":"0.12"},{"v":7.624402586706514,"d":"7.62"}]
["Pod Width (PW)","2019_EZ",7,19478297,"G","A",{"v":0.118,"d":"0.12"},{"v":7.9727046314487895,"d":"7.97"}]
["Pod Width (PW)","2019_EZ",7,22572022,"A","G",0.13,{"v":13.342652483391273,"d":"13.34"}]
["Pod Width (PW)","2019_EZ",7,32427947,"A","G",{"v":0.124,"d":"0.12"},{"v":10.72948117204578,"d":"10.73"}]
["Pod Width (PW)","2019_EZ",7,36725526,"T","G",{"v":0.053,"d":"0.05"},{"v":7.434510504039,"d":"7.43"}]
["Pod Width (PW)","2019_EZ",7,40214836,"T","C",{"v":0.065,"d":"0.07"},{"v":8.885979817773427,"d":"8.89"}]
["Pod Width (PW)","2019_EZ",8,9758759,"A","G",{"v":0.497,"d":"0.50"},{"v":6.903489026311039,"d":"6.90"}]
["Pod Width (PW)","2019_EZ",8,13451256,"A","T",{"v":0.099,"d":"0.10"},{"v":9.419113553995377,"d":"9.42"}]
["Pod Width (PW)","2019_EZ",8,15158460,"T","A",{"v":0.053,"d":"0.05"},{"v":6.644525300239625,"d":"6.64"}]
["Pod Width (PW)","2019_EZ",8,31739078,"A","G",{"v":0.124,"d":"0.12"},{"v":8.03128833655586,"d":"8.03"}]
["Pod Width (PW)","2019_EZ",8,43087675,"T","C",{"v":0.063,"d":"0.06"},{"v":11.248954353536377,"d":"11.25"}]
["Pod Width (PW)","2019_EZ",9,3226744,"A","G",0.13,{"v":6.530743671196641,"d":"6.53"}]
["Pod Width (PW)","2019_EZ",11,19220577,"C","T",{"v":0.074,"d":"0.07"},{"v":6.759566579023568,"d":"6.76"}]
["Pod Width (PW)","2019_LS",2,24230836,"G","A",{"v":0.445,"d":"0.45"},{"v":8.82322165181677,"d":"8.82"}]
["Pod Width (PW)","2019_LS",3,12248102,"A","T",{"v":0.222,"d":"0.22"},{"v":6.983644521795455,"d":"6.98"}]
["Pod Width (PW)","2020_LS",1,9865038,"G","A",{"v":0.494,"d":"0.49"},{"v":6.659903658260604,"d":"6.66"}]
["Pod Width (PW)","2020_LS",1,18910675,"G","C",{"v":0.104,"d":"0.10"},{"v":6.523827701374072,"d":"6.52"}]
["Pod Width (PW)","2020_LS",2,7831341,"A","G",{"v":0.451,"d":"0.45"},{"v":6.741080780750545,"d":"6.74"}]
["Pod Width (PW)","2020_LS",2,17430382,"G","A",{"v":0.119,"d":"0.12"},{"v":6.550059165341126,"d":"6.55"}]
["Pod Width (PW)","2020_LS",6,17561030,"G","A",{"v":0.372,"d":"0.37"},{"v":6.636526790903005,"d":"6.64"}]
["Pod Width (PW)","2020_LS",6,35705110,"T","C",{"v":0.051,"d":"0.05"},{"v":6.478041456613629,"d":"6.48"}]
["Pod Width (PW)","2020_LS",8,9207785,"A","C",{"v":0.183,"d":"0.18"},{"v":7.918219334220662,"d":"7.92"}]
["Seeds per Pod (SP)","2019_EZ",5,463300,"C","T",{"v":0.057,"d":"0.06"},{"v":15.16024820085271,"d":"15.16"}]
["Seeds per Pod (SP)","2019_EZ",7,50906091,"T","A",0.08,{"v":6.529146913037897,"d":"6.53"}]
["Seeds per Pod (SP)","2019_LS",2,7258,"T","C",{"v":0.052,"d":"0.05"},{"v":11.701172021735307,"d":"11.70"}]
["Seeds per Pod (SP)","2019_LS",5,463300,"C","T",{"v":0.056,"d":"0.06"},{"v":10.421631190996003,"d":"10.42"}]
["Seeds per Pod (SP)","2020_LS",5,22746045,"A","C",{"v":0.209,"d":"0.21"},{"v":6.665802880101742,"d":"6.67"}]
["Seeds per Pod (SP)","2021_WH",2,7258,"T","C",{"v":0.052,"d":"0.05"},{"v":6.592838456771485,"d":"6.59"}]
["Seeds per Pod (SP)","2021_WH",5,497015,"T","C",{"v":0.068,"d":"0.07"},{"v":7.206938472785252,"d":"7.21"}]
["Seeds per Pod (SP)","2021_GC",4,1626933,"G","A",{"v":0.053,"d":"0.05"},{"v":7.441755484617495,"d":"7.44"}]
["Seeds per Pod (SP)","2021_GC",7,22184805,"G","A",{"v":0.058,"d":"0.06"},{"v":6.527690943513342,"d":"6.53"}]
["Seeds per Pod (SP)","2021_GC",8,7764308,"T","C",{"v":0.053,"d":"0.05"},{"v":6.646816862887806,"d":"6.65"}]
["100-Seed Weight (HSW)","2019_EZ",2,24282269,"G","T",{"v":0.499,"d":"0.50"},{"v":11.491980152403883,"d":"11.49"}]
["100-Seed Weight (HSW)","2019_EZ",3,12355802,"T","C",{"v":0.412,"d":"0.41"},{"v":9.832256851862967,"d":"9.83"}]
["100-Seed Weight (HSW)","2019_EZ",4,7171502,"C","A",{"v":0.497,"d":"0.50"},{"v":8.240556006825916,"d":"8.24"}]
["100-Seed Weight (HSW)","2019_EZ",5,3911134,"A","G",{"v":0.388,"d":"0.39"},{"v":7.554893574778533,"d":"7.55"}]
["100-Seed Weight (HSW)","2019_EZ",5,35482500,"T","C",{"v":0.159,"d":"0.16"},{"v":7.124839439289333,"d":"7.12"}]
["100-Seed Weight (HSW)","2019_EZ",6,21148758,"C","T",0.12,{"v":6.946272905427687,"d":"6.95"}]
["100-Seed Weight (HSW)","2019_EZ",7,3556284,"A","G",{"v":0.092,"d":"0.09"},{"v":6.754124009332514,"d":"6.75"}]
["100-Seed Weight (HSW)","2019_EZ",7,12986661,"C","T",{"v":0.468,"d":"0.47"},{"v":6.5193159706859705,"d":"6.52"}]
["100-Seed Weight (HSW)","2019_EZ",7,22617144,"T","C",{"v":0.131,"d":"0.13"},{"v":7.216543230935994,"d":"7.22"}]
["100-Seed Weight (HSW)","2019_EZ",7,25508268,"T","A",0.06,{"v":6.487664273033003,"d":"6.49"}]
["100-Seed Weight (HSW)","2019_EZ",7,32427947,"A","G",0.13,{"v":7.645291841639785,"d":"7.65"}]
["100-Seed Weight (HSW)","2019_EZ",8,31739078,"A","G",0.13,{"v":6.969901239989922,"d":"6.97"}]
["100-Seed Weight (HSW)","2019_EZ",8,36827657,"G","T",{"v":0.494,"d":"0.49"},{"v":6.955412814731093,"d":"6.96"}]
["100-Seed Weight (HSW)","2019_EZ",8,43087675,"T","C",{"v":0.069,"d":"0.07"},{"v":8.981792730504882,"d":"8.98"}]
["100-Seed Weight (HSW)","2019_EZ",9,4049773,"A","G",{"v":0.134,"d":"0.13"},{"v":6.50898644162865,"d":"6.51"}]
["100-Seed Weight (HSW)","2020_LS",7,25509118,"T","C",{"v":0.132,"d":"0.13"},{"v":9.821466201570928,"d":"9.82"}]
["100-Seed Weight (HSW)","2019_LS",2,24282269,"G","T",{"v":0.498,"d":"0.50"},{"v":9.325802560448263,"d":"9.33"}]
["100-Seed Weight (HSW)","2019_LS",3,12657588,"G","A",{"v":0.304,"d":"0.30"},{"v":6.534363041648706,"d":"6.53"}]
["100-Seed Weight (HSW)","2019_LS",6,7696707,"T","C",{"v":0.074,"d":"0.07"},{"v":10.113740979150156,"d":"10.11"}]
["100-Seed Weight (HSW)","2019_LS",6,15707086,"A","G",{"v":0.054,"d":"0.05"},{"v":6.564993349827607,"d":"6.56"}]
["100-Seed Weight (HSW)","2019_LS",7,24811740,"A","G",{"v":0.128,"d":"0.13"},{"v":6.919166515047549,"d":"6.92"}]
["100-Seed Weight (HSW)","2019_LS",8,5482419,"T","G",{"v":0.076,"d":"0.08"},{"v":8.092705452199692,"d":"8.09"}]
["100-Seed Weight (HSW)","2019_LS",8,24413184,"T","C",{"v":0.073,"d":"0.07"},{"v":6.552987016212811,"d":"6.55"}]
["100-Seed Weight (HSW)","2019_LS",8,35144350,"A","G",{"v":0.074,"d":"0.07"},{"v":7.74225520626947,"d":"7.74"}]
["100-Seed Weight (HSW)","2019_LS",9,18998931,"T","C",{"v":0.107,"d":"0.11"},{"v":6.627667504145057,"d":"6.63"}]
["Plant Height (PH)","2021_EZ",8,20078339,"A","G",0.06,{"v":6.502853950161224,"d":"6.50"}]
["Plant Height (PH)","2021_EZ",10,425804,"A","G",0.09,{"v":8.185050307599596,"d":"8.19"}]
["Branch Number (BN)","2021_EZ",3,8236844,"T","A",{"v":0.238,"d":"0.24"},{"v":7.503416127090375,"d":"7.50"}]
["Protein content (PRO)","2019_EZ",1,8145968,"T","C",{"v":0.086,"d":"0.09"},{"v":7.7311095234298035,"d":"7.73"}]
["Protein content (PRO)","2019_EZ",4,16046710,"T","C",{"v":0.069,"d":"0.07"},{"v":7.329279559136947,"d":"7.33"}]
["Starch content (STA)","2019_EZ",4,16050656,"C","T",{"v":0.054,"d":"0.05"},{"v":16.0635086262736,"d":"16.06"}]
["Starch content (STA)","2019_EZ",5,4997361,"G","A",{"v":0.108,"d":"0.11"},{"v":6.9326028944104,"d":"6.93"}]
["Starch content (STA)","2019_EZ",5,10299037,"A","C",{"v":0.166,"d":"0.17"},{"v":8.494487537103963,"d":"8.49"}]
["Starch content (STA)","2019_EZ",6,8568351,"G","A",{"v":0.106,"d":"0.11"},{"v":7.081819731619845,"d":"7.08"}]
["Starch content (STA)","2019_EZ",7,11022998,"T","G",{"v":0.061,"d":"0.06"},{"v":14.171441923304773,"d":"14.17"}]
["Starch content (STA)","2019_EZ",8,3927940,"T","C",0.47,{"v":9.45548746564032,"d":"9.46"}]
["Starch content (STA)","2019_EZ",10,1150198,"C","A",{"v":0.058,"d":"0.06"},{"v":16.326853709593212,"d":"16.33"}]
["Starch content (STA)","2019_EZ",10,5975766,"A","G",{"v":0.061,"d":"0.06"},{"v":13.284542539977732,"d":"13.28"}]
["Starch content (STA)","2019_EZ",10,12764880,"A","T",{"v":0.062,"d":"0.06"},{"v":12.931770710976975,"d":"12.93"}]
["Starch content (STA)","2019_EZ",10,17421528,"A","T",{"v":0.094,"d":"0.09"},{"v":9.925642223423257,"d":"9.93"}]
["Starch content (STA)","2019_EZ",11,4589620,"C","A",0.079,{"v":8.647358723261975,"d":"8.65"}]

{"sheet":"Table S17","index":16,"n_rows":15,"n_cols":4,"rows_kept":15,"flags":["formulas_cached_only"]}
["Supplemetary Table 17 Genes in the Mb 0.16-0.28 region on mungbean chromosome 5"]
["Gene ID","Positon","Description","Superfamily"]
["Vradi05g00090","Chromosome 5: 201,887-203,872","DnaJ domain protein","Chaperone J-domain"]
["Vradi05g00100","Chromosome 5: 204,698-215,627","GDSL lipase/esterase","SGNH hydrolase"]
["Vradi05g00110","Chromosome 5: 217,803-219,595","Uncharacterized protein"]
["Vradi05g00120","Chromosome 5: 226,897-230,267","Initiation factor 2B-related","NagB/RpiA transferase-like"]
["Vradi05g00130","Chromosome 5: 231,946-232,541","Uncharacterized protein"]
["Vradi05g00140","Chromosome 5: 234,495-237,527","Uncharacterized protein","Remorin, C-terminal"]
["Vradi05g00150","Chromosome 5: 237,192-240,644","Pectinesterase inhibitor domain","Invertase/pectin methylesterase inhibitor domain"]
["Vradi05g00160","Chromosome 5: 242,213-248,116","Pumilio RNA-binding repeat","Armadillo-type fold"]
["Vradi05g00170","Chromosome 5: 248,393-248,626","Uncharacterized protein"]
["Vradi05g00180","Chromosome 5: 250,664-251,524","RING-H2 finger protein","Zinc finger, RING-type"]
["Vradi05g00190","Chromosome 5: 254,111-259,796","Uncharacterized protein"]
["Vradi05g00200","Chromosome 5: 261,657-269,795","Serine-threonine/tyrosine-protein kinase","Leucine-rich repeat domain,Protein kinase-like"]
["Vradi05g00210","Chromosome 5: 272,418-279,774","Cation-transporting P-type ATPase","P-type ATPase, transmembrane domain"]

{"sheet":"Table S18","index":17,"n_rows":24,"n_cols":4,"rows_kept":24,"flags":["formulas_cached_only"]}
["Supplemetary Table 18 Genes in the Mb 7.93-8.13 region on mungbean chromosome 3"]
["Gene ID","Positon","Description","Superfamily"]
["Vradi03g06500","Chromosome 3: 7,931,669-7,932,067","Calvin cycle protein CP12-2, chloroplastic-like","Domain of unknown function CP12"]
["Vradi03g06510","Chromosome 3: 7,934,693-7,941,364","Peptidase S9, prolyl oligopeptidase, catalytic domain","Alpha/Beta hydrolase fold"]
["Vradi03g06520","Chromosome 3: 7,946,153-7,947,863","Protein trichome birefringence-like 6","Trichome birefringence-like family"]
["Vradi03g06530","Chromosome 3: 7,950,119-7,957,491","Histone-lysine N-methyltransferase","Pre-SET CXC domain"]
["Vradi03g06540","Chromosome 3: 7,959,965-7,961,879","Transcription factor GRAS"]
["Vradi03g06550","Chromosome 3: 7,965,336-7,966,196","Uncharacterized protein"]
["Vradi03g06560","Chromosome 3: 7,968,517-7,970,262","probable WRKY transcription factor 69","WRKY domain superfamily"]
["Vradi03g06570","Chromosome 3: 7,974,635-7,981,170","INO80 complex, subunit Ies2","Invertase/pectin methylesterase inhibitor domain superfamily"]
["Vradi03g06580","Chromosome 3: 7,982,881-7,988,415","Serine-threonine/tyrosine-protein kinase","Protein kinase-like domain superfamily"]
["Vradi03g06590","Chromosome 3: 7,991,238-7,994,659","DEAD-box ATP-dependent RNA helicase 24","Helicase superfamily"]
["Vradi03g06600","Chromosome 3: 8,000,347-8,014,717","Carbohydrate-binding-like fold","Carboxypeptidase-like, regulatory domain superfamily"]
["Vradi03g06610","Chromosome 3: 8,024,691-8,027,545","Stachyose synthase","Glycoside hydrolase superfamily"]
["Vradi03g06620","Chromosome 3: 8,043,878-8,045,831","WRKY domain protein","WRKY domain superfamily"]
["Vradi03g06630","Chromosome 3: 8,046,718-8,055,799","Nucleotide-binding alpha-beta plait domain protein","Nucleotide-binding alpha-beta plait domain superfamily"]
["Vradi03g06640","Chromosome 3: 8,062,382-8,066,626","Zinc finger, CCHC-type","Zinc finger, CCHC-type superfamily"]
["Vradi03g06650","Chromosome 3: 8,069,253-8,073,455","DEAD/DEAH box helicase","Helicase superfamily"]
["Vradi03g06660","Chromosome 3: 8,074,200-8,077,047","Stachyose synthase-like","Glycoside hydrolase superfamily"]
["Vradi03g06670","Chromosome 3: 8,077,854-8,078,845","NifU-like protein 1","Fe-S cluster assembly domain superfamily"]
["Vradi03g06680","Chromosome 3: 8,079,875-8,086,683","SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1"]
["Vradi03g06690","Chromosome 3: 8,092,219-8,095,631","Isopenicillin N synthase-like"]
["Vradi03g06700","Chromosome 3: 8,099,071-8,100,140","SANT/Myb domain","Homeobox-like domain superfamily"]
["Vradi03g06710","Chromosome 3: 8,112,799-8,114,188","SANT/Myb domain","Homeobox-like domain superfamily"]