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{"sheet":"Immuneactivation_RPKM_RNAseq","index":0,"n_rows":76,"n_cols":14,"rows_kept":76}
["Gene","KC.1","KC.2","KC.3","LSEC.1","LSEC.2","LSEC.3","rank","logFC_limma","AveExpr","t","P.Value","adj.P.Val","DGE"]
["Ephb4",5.26050901412964,2.41610240936279,1.90944874286652,157.405044555664,69.8473434448242,93.9489440917969,-26.64566442,-5.640080246,5.799161123,-10.49394427,{"v":4.96e-26,"d":"4.96E-26"},{"v":4.49e-24,"d":"4.49E-24"},"LSEC"]
["Cav1",0,0.458473831415176,0,15.9589986801147,12.8201522827148,13.0581073760986,-23.82824565,-6.120383325,1.939427009,-10.23893899,{"v":7.1e-25,"d":"7.10E-25"},5.59E-23,"LSEC"]
["Efnb2",4.01107597351074,2.48703718185425,1.61770236492157,49.3075790405273,48.0610656738281,42.4493942260742,-26.89547377,-4.833811841,5.212926257,-8.687107848,{"v":1.93e-18,"d":"1.93E-18"},{"v":7.19e-17,"d":"7.19E-17"},"LSEC"]
["Dpp4",7.58133172988892,10.5264596939087,3.52802109718323,104.290451049805,79.111701965332,72.8236389160156,-19.33679022,-4.319489509,6.507244045,-8.02007072,{"v":5.42e-16,"d":"5.42E-16"},{"v":1.53e-14,"d":"1.53E-14"},"LSEC"]
["Wdfy4",49.9550895690918,65.5743255615234,43.7140312194824,1.8035637140274,3.82500910758972,1.35796117782593,21.28110005,4.017570609,6.39850152,7.374607585,{"v":8.4e-14,"d":"8.40E-14"},{"v":1.8E-12,"d":"1.80E-12"},"KC"]
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["Clec4a2",27.6204013824463,31.0548191070557,16.0409564971924,0.534348011016846,0.561328828334808,0,16.19924781,4.62740147,1.935582966,6.693112377,{"v":1.11e-11,"d":"1.11E-11"},{"v":1.89e-10,"d":"1.89E-10"},"KC"]
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["Ctss",1521.75354003906,2462.43481445313,3109.42578125,196.821426391602,248.985046386719,60.8426971435547,11.24637556,3.794318487,8.803869508,6.642078584,{"v":1.57e-11,"d":"1.57E-11"},{"v":2.62e-10,"d":"2.62E-10"},"KC"]
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["Pycard",264.741119384766,396.407623291016,261.993621826172,20.353645324707,23.7138710021973,10.6327037811279,21.01694312,3.660562547,5.740410958,6.436300652,{"v":6.19e-11,"d":"6.19E-11"},{"v":9.69e-10,"d":"9.69E-10"},"KC"]
["Efnb1",1.73899340629578,2.15649914741516,1.84104740619659,31.9606590270996,19.5482788085938,35.577033996582,-23.20136389,-3.850018037,4.286698772,-6.405654468,{"v":7.57e-11,"d":"7.57E-11"},{"v":1.17e-09,"d":"1.17E-09"},"LSEC"]
["Cd68",811.59912109375,913.209228515625,942.557983398438,87.3523406982422,93.5053405761719,33.5345726013184,14.9333571,3.405991458,7.880718869,5.834643625,{"v":2.72e-09,"d":"2.72E-09"},{"v":3.46e-08,"d":"3.46E-08"},"KC"]
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["Fcer1g",555.293518066406,618.294006347656,692.26513671875,76.6565017700195,74.2448501586914,37.3155670166016,15.69748422,3.11846463,6.588797264,5.228095194,{"v":8.6e-08,"d":"8.60E-08"},{"v":9.04e-07,"d":"9.04E-07"},"KC"]
["Clec4b2",8.48000526428223,14.3550729751587,5.49652719497681,0,0.307748138904572,0,6.989192588,3.833321888,0.823887593,5.021158155,{"v":2.58e-07,"d":"2.58E-07"},{"v":2.55e-06,"d":"2.55E-06"},"KC"]
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["Cd274",9.50107669830322,25.5783195495605,13.7062978744507,18.3809108734131,201.073699951172,97.6116180419922,-4.972548582,-2.71854435,5.656653525,-4.233099767,{"v":1.15E-5,"d":"1.15E-05"},{"v":9.13e-05,"d":"9.13E-05"},"LSEC"]
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["Ptpn22",8.77900505065918,18.0733604431152,4.99856519699097,0.874175429344177,1.31187868118286,0.797356009483337,7.068838022,2.393835926,2.809604634,2.796461196,2.584477E-3,0.014213243,"KC"]
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["Rftn1",15.0592756271362,15.3548183441162,15.6393642425537,14.8097219467163,14.4098224639893,17.6327571868896,-0.347858821,-0.17909534,5.119639256,0,0.982094149,0.999974447,"NS"]
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["Psme1",470.969848632813,383.497772216797,199.100341796875,332.416839599609,173.339447021484,325.812622070313,0.143708073,-0.163478981,7.870398599,0,0.981307167,0.999974447,"NS"]
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["Lgals8",37.4356384277344,28.1353721618652,21.4461994171143,21.94651222229,32.4206085205078,23.6461811065674,-0.063763804,-0.455884102,5.739484433,0,0.914145333,0.999974447,"NS"]
["Ap3d1",48.2998275756836,42.0667877197266,53.1183853149414,40.5201568603516,41.3542900085449,40.9709930419922,0.023661252,0.058370086,7.375579632,0,0.994066485,0.999974447,"NS"]
["B2m",1736.15405273438,1792.65063476563,1549.39440917969,1473.78796386719,1322.55151367188,1638.556640625,-0.0108853,-0.031537163,11.15096808,0,0.995788464,0.999974447,"NS"]

{"sheet":"Immuneactivation_iBAQ_LFP","index":1,"n_rows":50,"n_cols":16,"rows_kept":50}
["ID","Gene","KC.A","KC.B","KC.C","KC.D","LSEC.A","LSEC.B","LSEC.C","logFC","AveExpr","t","P.Value","adj.P.Val","DGE","Annotated Term"]
["A0A0G2K9R6;A3RLA8;Q63203","Fcgr2;Fcgr2a;Fcgr2b",14.1644258499146,12.0740489959717,8.61003398895264,1.32119929790497,564.8203125,391.904968261719,463.681793212891,-5.584270637,5.456661652,{"v":-10.95694681,"d":"-1.10E+01"},{"v":3.6e-06,"d":"3.60E-06"},{"v":5.16e-05,"d":"5.16E-05"},"LSEC","antigen processing and presentation of exogenous peptide antigen via MHC class II"]
["Q6P7B6","Efnb1",0,0,1.20088922977448,0,17.48606300354,13.2586708068848,12.959098815918,-4.262926421,1.352552241,-7.242101512,{"v":6.16e-05,"d":"6.16E-05"},0.000442777,"LSEC","T cell costimulation"]
["Q2IBC6;P41350","Cav1",19.0014247894287,8.33681583404541,13.003472328186,29.4960403442383,167.107009887695,98.1441345214844,137.103942871094,-3.20179697,5.3154944,{"v":-6.434757228,"d":"-6.43E+00"},{"v":0.000131262,"d":"1.31E-04"},0.000810849,"LSEC","T cell costimulation"]
["F1M7X5;A0A0G2JTX5;A0A0G2K238;P14740","Dpp4",482.689544677734,376.880828857422,412.791015625,553.031494140625,3248.09912109375,3265.07739257813,3173.85522460938,-2.928308936,10.03583151,{"v":-17.40377089,"d":"-1.74E+01"},{"v":1.16e-07,"d":"1.16E-07"},{"v":9.71e-06,"d":"9.71E-06"},"LSEC","T cell costimulation"]
["G3V837;Q63493","Cd1d1;Cd1d",68.5950393676758,59.9347839355469,74.1173553466797,91.1919021606445,348.017578125,305.18994140625,334.628021240234,-2.245057335,7.122507177,-9.379943218,{"v":1.01E-5,"d":"1.01E-05"},1.06508E-4,"LSEC","antigen processing and presentation;antigen processing and presentation, endogenous lipid antigen via MHC class Ib;antigen processing and presentation, exogenous lipid antigen via MHC class Ib"]
["Q6P9V1;Q62745","Cd81",23.6603813171387,30.7049884796143,30.4754886627197,33.8574829101563,144.111938476563,93.2639999389648,101.77449798584,-1.897982082,5.716740172,-4.589638442,1.037287E-3,4.687348E-3,"LSEC","CD4-positive, alpha-beta T cell costimulation"]
["Q5U316","Rab35",97.8430862426758,65.9619827270508,93.2091293334961,60.8868560791016,198.460983276367,317.026153564453,321.105560302734,-1.809943243,7.062913791,{"v":-3.470678877,"d":"-3.47E+00"},4.624609E-3,0.017672614,"LSEC","antigen processing and presentation"]
["P10960;F7EPE0","Psap",11109.193359375,10361.4169921875,12063.8955078125,13796.708984375,3890.11889648438,3489.5458984375,3245.6435546875,1.691017028,12.77834384,7.041307783,{"v":7.18e-05,"d":"7.18E-05"},0.000496678,"KC","antigen processing and presentation"]
["D3ZDJ4;A0A0G2JW71","Unc93b1",57.3340759277344,59.6213073730469,45.6012687683105,47.6153030395508,11.4798231124878,16.3247566223145,11.1195316314697,1.960434355,4.867475615,4.433810378,1.263454E-3,0.005558455,"KC","antigen processing and presentation;antigen processing and presentation of exogenous peptide antigen via MHC class II"]
["D4A6L1","Tapbpl",62.1445732116699,26.4819278717041,19.6885852813721,39.0558166503906,2.68352675437927,6.56688070297241,4.23059272766113,2.633328573,3.871147888,3.072724083,0.008296422,0.029732153,"KC","negative regulation of antigen processing and presentation of peptide antigen via MHC class I;peptide antigen assembly with MHC class I protein complex"]
["Q5BK16","Trex1",89.4380264282227,76.7748413085938,84.2552108764648,73.0191040039063,20.500696182251,20.1501235961914,0.614400863647461,3.592800006,4.897823675,{"v":3.036517189,"d":"3.04E+00"},0.009060967,0.032085747,"KC","T cell antigen processing and presentation"]
["D4A748","Wdfy4",42.7757415771484,19.8822250366211,34.9332122802734,30.9193992614746,1.52653896808624,1.59071314334869,1.5509045124054,3.9033656,3.289229066,{"v":7.68971448,"d":"7.69E+00"},{"v":4.07E-5,"d":"4.07E-05"},3.12021E-4,"KC","antigen processing and presentation"]
["P20411","Fcer1g",783.89990234375,1105.04467773438,1173.11682128906,1113.46911621094,58.1963272094727,78.1660995483398,41.9979438781738,4.141168805,8.232343691,12.93320352,{"v":1.05e-06,"d":"1.05E-06"},{"v":2.49e-05,"d":"2.49E-05"},"KC","antigen processing and presentation of exogenous peptide antigen via MHC class I;antigen processing and presentation of exogenous peptide antigen via MHC class II"]
["D3ZZR3;Q02765","Ctss",1975.30004882813,1226.90844726563,854.935546875,1567.29162597656,32.6569671630859,121.417846679688,53.0536003112793,4.256239777,8.469794506,{"v":6.551119622,"d":"6.55E+00"},{"v":1.19807E-4,"d":"1.20E-04"},7.50922E-4,"KC","antigen processing and presentation of peptide antigen"]
["G3V8L1","Pycard",1173.52807617188,1088.66967773438,1231.27661132813,1627.43078613281,43.380916595459,88.5559539794922,45.1421432495117,4.359074574,8.380865609,{"v":14.42870051,"d":"1.44E+01"},{"v":4.74e-07,"d":"4.74E-07"},{"v":1.67e-05,"d":"1.67E-05"},"KC","positive regulation of antigen processing and presentation of peptide antigen via MHC class II"]
["D4AEG2","Rab32;Rab38;Rab29",237.487213134766,288.134063720703,242.991165161133,188.153182983398,9.15589714050293,13.2548933029175,9.96142196655273,4.430587021,5.999348096,14.82075663,{"v":3.9e-07,"d":"3.90E-07"},{"v":1.52E-5,"d":"1.52E-05"},"KC","antigen processing and presentation"]
["P10247","Cd74",315.605377197266,90.2584457397461,81.3607406616211,193.99543762207,2.78019595146179,11.5003623962402,2.77322292327881,4.595863897,5.110914842,{"v":4.25750401,"d":"4.26E+00"},0.001692309,7.204289E-3,"KC","antigen processing and presentation;antigen processing and presentation of exogenous peptide antigen via MHC class II;positive regulation of dendritic cell antigen processing and presentation"]
["M0RBE8;G3V9K5","Was",98.1375579833984,97.6003875732422,102.18709564209,48.181453704834,1.51050615310669,5.11604070663452,3.18953013420105,4.634896337,4.415457504,{"v":9.010221423,"d":"9.01E+00"},{"v":1.39e-05,"d":"1.39E-05"},1.37436E-4,"KC","regulation of T cell antigen processing and presentation"]
["Q4FZY1","Cd68",1277.90612792969,1406.22924804688,1453.787109375,1221.35961914063,20.9769554138184,127.835433959961,30.1132831573486,4.828537237,8.271969681,8.325869612,{"v":2.43e-05,"d":"2.43E-05"},0.000211841,"KC","negative regulation of dendritic cell antigen processing and presentation"]
["P16228","Ctse",71.367805480957,6.36232805252075,18.521598815918,30.1347789764404,0,0,0,5.346411904,2.161803843,4.405182781,0.001439951,0.006216274,"KC","antigen processing and presentation of exogenous peptide antigen via MHC class II"]
["A0A0G2JZT3;F1LSN8;P70553","Slc11a1",319.139007568359,326.343109130859,241.656646728516,230.987762451172,0,16.254243850708,8.02368354797363,5.69067435,5.515037802,5.628136282,0.000334339,0.001776027,"KC","antigen processing and presentation of peptide antigen;positive regulation of dendritic cell antigen processing and presentation"]
["Q99JC6","Tapbp",530.887390136719,400.837005615234,327.510864257813,493.677032470703,84.7897720336914,127.743087768555,165.268157958984,1.6558994,7.971260794,2.486215624,0.019740866,0.064216758,"NS","antigen processing and presentation of endogenous peptide antigen via MHC class I;antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent;peptide antigen stabilization"]
["A0A0G2K477;A0A0G2K9Y0;F1LPQ6;F1LN61;P20759","Ighm;Igg-2a",0.455158919095993,0,0.753523886203766,2.58073878288269,10.7821168899536,2.40392899513245,2.12168025970459,-2.035570812,1.043933191,-1.649588806,0.070729563,0.199938646,"NS","antigen processing and presentation"]
["Q63798","Psme2",1485.62023925781,1185.20788574219,1142.90966796875,1239.63330078125,427.422637939453,538.531433105469,578.639099121094,1.228672789,9.739637445,1.502058677,0.086870897,0.239527734,"NS","antigen processing and presentation of exogenous antigen"]
["F1MAJ0;A0A0G2JY48;P54759;F1LQK6;D3ZBN3;D3ZZK3;M0RDA4;D3ZH39;P09759;P54758","Ephb2;Epha7;Epha2;Epha4;Ephb4;Ephb3;Ephb1;Epha6",2.34809803962708,0,3.04962277412415,0,9.96477031707764,8.30986976623535,2.38491725921631,-1.956131856,1.341824819,-1.139645506,0.148956659,0.382687681,"NS","positive regulation of T cell costimulation"]
["P51146","Rab4b;Rab4a",3.4037024974823,7.95363235473633,9.20729827880859,3.08277487754822,21.6448402404785,22.1253471374512,12.1473846435547,-1.445060859,3.256297934,-1.110490995,0.150650206,0.385109229,"NS","antigen processing and presentation"]
["A0A0G2JWD6;D3ZIF5","Ap3b1;Ap3b2",46.2633895874023,50.2941551208496,50.6850776672363,40.609920501709,28.5767288208008,29.3827991485596,28.9943237304688,0.703880784,5.271193719,0,0.962307529,0.999999844,"NS","antigen processing and presentation;antigen processing and presentation, exogenous lipid antigen via MHC class Ib"]
["A0A0G2K7Q7;P35559","Ide",11.371883392334,8.27040767669678,7.91067838668823,10.3113241195679,14.3483028411865,13.8085517883301,17.8062038421631,-0.759766038,3.590585275,0,0.848946253,0.999999844,"NS","antigen processing and presentation of endogenous peptide antigen via MHC class I"]
["A0A0G2KAB9;Q3MQ06;D3ZJZ1","Atg5",24.2375411987305,20.5656852722168,22.5576267242432,11.1152830123901,20.5254993438721,17.8112525939941,22.7283725738525,0.020909465,4.316730049,0,0.99949006,0.999999844,"NS","antigen processing and presentation of endogenous antigen"]
["A0A0H2UHP9;Q9WVB1;A0A0G2JT78","Rab6a;Rab6b;Rab42;Rab39a",516.861572265625,540.25341796875,509.640045166016,391.525115966797,627.173950195313,670.026916503906,758.787475585938,-0.468423887,9.136417581,0,0.998072517,0.999999844,"NS","antigen processing and presentation"]
["A1L1J8","Rab5b",108.072494506836,122.546485900879,112.280166625977,113.036247253418,182.797286987305,167.14680480957,176.200180053711,-0.631929032,7.103203677,0,0.995183601,0.999999844,"NS","antigen processing and presentation"]
["B2RYF7;A0A0G2K6R7","Washc1",72.334114074707,83.7311248779297,82.4487991333008,80.8106460571289,140.444778442383,147.793319702148,52.252555847168,-0.313565195,6.482114365,0,0.956692001,0.999999844,"NS","dendritic cell antigen processing and presentation"]
["B5DFK6","Ap3d1",21.8521137237549,19.7430152893066,14.2688627243042,9.83479309082031,12.4332275390625,11.3273935317993,16.4705181121826,0.302469111,3.91680506,0,0.977862025,0.999999844,"NS","antigen processing and presentation;antigen processing and presentation, exogenous lipid antigen via MHC class Ib"]
["D3ZIY3","Ythdf3;Ythdf1;Ythdf2",14.9841833114624,8.37996006011963,13.9072799682617,13.9428005218506,15.6752147674561,9.05995845794678,6.02526903152466,0.413125135,3.540432258,0,0.933481955,0.999999844,"NS","regulation of antigen processing and presentation"]
["P07151","B2m",2017.86218261719,2299.388671875,2096.76220703125,2787.82446289063,1405.2744140625,1649.68444824219,1700.07458496094,0.427755179,10.92902132,0,0.999762989,0.999999844,"NS","antigen processing and presentation of endogenous peptide antigen via MHC class I;antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent;antigen processing and presentation of peptide antigen via MHC class I"]
["P11762","Lgals1",40.2120475769043,48.438045501709,156.592910766602,148.066665649414,29.8809051513672,52.4147529602051,58.951961517334,0.679995998,6.002148953,0,0.717173827,0.999999844,"NS","T cell costimulation"]
["P13599","Fcgrt",741.417053222656,698.824951171875,630.877136230469,812.899108886719,1476.58044433594,1420.89270019531,1259.5556640625,-1.002639104,9.893713551,-0.02509057,0.490316967,0.999999844,"NS","antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent;antigen processing and presentation of endogenous peptide antigen via MHC class Ib"]
["P18418","Calr;Calr4",3921.26611328125,4888.72265625,3944.0830078125,5274.84765625,3113.87255859375,3508.349609375,3438.01196289063,0.328976175,11.94749304,0,0.999875814,0.999999844,"NS","peptide antigen assembly with MHC class I protein complex"]
["P28064","Psmb8",275.693481445313,239.042053222656,189.616302490234,231.621170043945,87.5425109863281,151.45751953125,154.575317382813,0.748303767,7.489658725,0,0.84935756,0.999999844,"NS","antigen processing and presentation"]
["P97949;P36370","Tap1",43.5488357543945,33.9389495849609,33.7432632446289,31.0328388214111,15.1213006973267,21.4676380157471,23.977222442627,0.763095351,4.811377289,0,0.848182672,0.999999844,"NS","antigen processing and presentation of endogenous peptide antigen via MHC class I;antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent"]
["P70550","Rab8b",51.567008972168,52.1935729980469,66.4736099243164,61.8916282653809,63.5435371398926,48.4983024597168,67.6648254394531,-0.055421263,5.879605805,0,0.999758704,0.999999844,"NS","antigen processing and presentation"]
["Q00238","Icam1",36.7332305908203,32.080982208252,28.7072467803955,44.3886795043945,41.0382995605469,52.7475929260254,54.1401786804199,-0.619619495,5.354843759,0,0.969124168,0.999999844,"NS","T cell antigen processing and presentation"]
["Q499T2","Ifi30",872.983642578125,541.127868652344,724.236572265625,801.835388183594,1456.44348144531,1225.25915527344,1143.04553222656,-0.845381361,9.846949533,0,0.790305278,0.999999844,"NS","antigen processing and presentation of exogenous peptide antigen via MHC class I;antigen processing and presentation of exogenous peptide antigen via MHC class II"]
["Q4KMA8;Q9JJ22;A0A0G2K2Y3","Erap1",116.143218994141,131.822906494141,99.6361770629883,93.781608581543,86.6006240844727,119.00611114502,123.595855712891,-0.018939431,6.774207749,0,0.999926329,0.999999844,"NS","antigen processing and presentation of endogenous peptide antigen via MHC class I"]
["Q5RKJ9;P35281","Rab10",326.786163330078,325.796569824219,382.686126708984,360.260833740234,234.568695068359,263.67919921875,196.040451049805,0.584920438,8.188890483,0,0.993243157,0.999999844,"NS","antigen processing and presentation"]
["Q6MG49;A0A0G2K7C1","Bag6",3.4609203338623,3.21020197868347,4.37143039703369,3.22893643379211,5.7662787437439,7.92905378341675,8.88293838500977,-0.995686601,2.430493187,0,0.5072445,0.999999844,"NS","antigen processing and presentation of peptide antigen via MHC class I"]
["P36372;Q6MGA3","Tap2",71.5752944946289,56.7587738037109,61.9299087524414,57.0898780822754,29.0543174743652,37.0379409790039,49.2443199157715,0.645382075,5.653541563,0,0.937803494,0.999999844,"NS","antigen processing and presentation of endogenous peptide antigen via MHC class I;antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent;antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent;antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent;peptide antigen transport;positive regulation of antigen processing and presentation of peptide antigen via MHC class I"]
["Q6MGA6;P28077","Psmb9",195.165191650391,194.629501342773,309.230346679688,336.094421386719,123.803749084473,166.513031005859,172.51692199707,0.599712068,7.666652835,0,0.942498984,0.999999844,"NS","antigen processing and presentation"]
["Q6P9V7;Q63797","Psme1;rCG_63136",2305.83056640625,2351.02978515625,2169.89038085938,2616.69775390625,1347.34387207031,1553.14782714844,1437.35278320313,0.635684038,10.89941215,0,0.998916178,0.999999844,"NS","antigen processing and presentation of exogenous antigen"]