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["Additional file 3 - Shotgun metagenomic sequencing"]
[]
["SampleID","Type","Project_accession","Sample_accession","Raw reads","Raw_base_yield","Reads passing QC","Diamond Aligned Reads","Reads aligned to Bacteria"]
["Negative","DNA free control","PRJEB24015","SAMEA104443104",4683069,1068571161,1340648,1067196,1044616]
["N1","NEC","PRJEB24015","SAMEA104443118",11283217,2776599929,10911722,8531217,8379002]
["C1","Control","PRJEB24015","SAMEA104443119",9718743,2457322537,9421250,7920665,7846144]
["N2","NEC","PRJEB24015","SAMEA104443120",9815346,2501554125,9550539,7674431,7527213]
["N3","NEC","PRJEB24015","SAMEA104443105",10434019,2441129840,9980950,8102324,7944330]
["C2","Control","PRJEB24015","SAMEA104443121",9847000,2592001512,9564665,8245260,8168787]
["N4","NEC","PRJEB24015","SAMEA104443122",10386167,2794334904,10090252,8767775,8696235]
["N5","NEC","PRJEB24015","SAMEA104443106",10762624,2505922716,9987788,8295466,8156320]
["C3","Control","PRJEB24015","SAMEA104443123",11442761,2810047454,11000798,8659418,8481494]
["N6","NEC","PRJEB24015","SAMEA104443124",9845386,2429962012,9554917,8060752,7970060]
["C4","Control","PRJEB24015","SAMEA104443125",9385745,2387282921,9126811,7733626,7639707]
["C5","Control","PRJEB24015","SAMEA104443107",10765181,2594964247,10370594,8183911,8050000]
["N7","NEC","PRJEB24015","SAMEA104443126",{"$nulls":6},"Removed: >8 PCR cycles required"]
["N8","NEC","PRJEB24015","SAMEA104443108",7561517,2102158841,7368441,6237493,6128005]
["N9","NEC","PRJEB24015","SAMEA104443127",10822711,2815307699,10586717,8218680,8141728]
["C6","Control","PRJEB24015","SAMEA104443128",11842425,3040509157,11525699,8843276,8756238]
["C7","Control","PRJEB24015","SAMEA104443129",5761388,1382111224,5578534,4497418,4443470]
["C8","Control","PRJEB24015","SAMEA104443109",10515261,2679320716,10193122,8319828,8154191]
["N10","NEC","PRJEB24015","SAMEA104443110",10350005,2600049005,9861645,8529508,8375357]
["C9","Control","PRJEB24015","SAMEA104443111",{"$nulls":6},"Removed: >8 PCR cycles required"]
["N11","NEC","PRJEB24015","SAMEA104443112",11524001,2977002794,11136028,9155007,8899671]
["C10","Control","PRJEB24015","SAMEA104443113",10272541,2693494729,9973844,8169003,7986450]
["C11","Control","PRJEB24015","SAMEA104443114",9771928,2516651174,9527686,7679846,7599186]
["N12","NEC","PRJEB24015","SAMEA104443115",11594820,2871837997,11318763,8621465,8536989]
["C12","Control","PRJEB24015","SAMEA104443117",10573383,2819047024,10383773,8595455,8390652]
["C12R","Control","PRJEB24015","SAMEA104443116",10746440,2830120810,10222145,8672325,8461457]