{"text_format":"3","workbook":"xlsx","n_sheets":8,"sheets":["Table S1 Metadata","Table S2 Reads by sample","Table S3 Alpha Diversity","Table S4 Bactiquant","Table S5 Site 1-5 MANOVA","Table S6 Site 6 MANOVA","Fig. S1 Cluster analysis","Fig. S2 Bar chart"],"not_rendered":{"images":126},"read":"whole","date_system":"1900"}

{"sheet":"Table S1 Metadata","index":0,"n_rows":30,"n_cols":24,"rows_kept":30,"merged":[[5,0,5,4],[5,6,5,9],[5,11,5,13],[5,15,5,17]]}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
[]
["Table S1. Metadata associated with larval sampling"]
[]
["Space / Time  phenotype",{"$nulls":5},"Treatment history:",{"$nulls":4},"Queen/hive history:",{"$nulls":3},"Beekeeper operation and apiary size:",{"$nulls":3},"EFB (or other disease) prevalence before/during/after your sampling:"]
["Illinois Site ID","Sample numbers","Latitude / Longitude","Date Sampled","Hive phenotype","Larval phenotypes","Were hives treated with antibiotics in the 12 months prior to sampling? (y/n) (e.g., TetraBee/Terramycin, etc.)","Please list all known/presumed antibiotic treatments and when they were applied in the preceding 12 months","Were hives treated with anything other than antibiotics in the 12 months prior to sampling? ","Please list all other (non-antibiotic) treatments and approximately when they were applied (e.g., \"ApiVar/amitraz in April and September\")",null,"Do you have any info on the queen origins/genetics? ","Approximately how long were these hives at this location prior to sampling?","Is there anything else that distinguishes the hives at these sites? ",null,"Approximate number of hives at the site/apiary?","Does this beekeeper maintain other apiaries in IL or other states? ","Do they regularly move their hives to other sites within or outside IL? If yes, then where? ",null,"Did the 'healthy' hive show signs of EFB at any point before/ during/ after your sampling? ","How many hives at this site showed EFB symptoms at the time of sampling? (i.e., can you give an approximate percent or count based on your inspections or the beekeeper's observations? ","How long had the diseased hive been displaying symptoms prior to sampling? (i.e., was it a 'fresh' outbreak in that hive or had the beekeeper noticed it some weeks/months earlier?)","Had the beekeeper observed EFB in the same hive in prior years? ","Had the beekeeper observed EFB at this site in prior years? Or elsewhere in their operation (if they're running a multi-site operation)."]
["Spring Valley","327-374","39.8805 / -90.9754","2016-06-22","Diseased","flattened, translucent, oxidized, wet oxidizing brown, flattening, loss of definition, wet, spots, shriveling, dry, hardening, misplaced,. yellow spot, brown, flat, scaley, scabby","Yes","Tetra Bee","Yes","Apiguard","-","Carniolan ","2 weeks in local orchard after overwintering in stationary location","Identical backgrounds","-",42,"Yes, locally, in county","only for 2 - 3 weeks - apple pollination within 50 miles, in state","-","No","4 hives out of 19 inspected","Yes, earlier spring","Had been infected in 2015","Yes, since at least 2015"]
[{"$nulls":4},"Healthy","Pearly white","No",null,"Yes","Apiguard","-","Carniolan ","2 weeks in local orchard after overwintering in stationary location",null,"-",42,"5 sites",null,"-"]
[]
["Butler","387-434","39.1834 / -89.5434","2016-07-08","Diseased","oxidized brown, flattening, misshapen, scabbed, loss of definiiton, wet, yellow, twisted in cell, oxidized, dry, oxidized brown, gooey","No",null,"Yes","Formic Acid and Honey Bee Healthy","-","2015 pkgs - conan - blonde bees","had moved from greenville late may","differentiation may have been due to strength of queen","-",3,"yes. 50 colonies, 10 apiaries","not these","-","recognized the 2016 efb in may",null,"Has had EFB presence here and there in apiaries since 2012",null,"Yes, since 2012 in their operation, but maybe not at this site."]
[{"$nulls":4},"Healthy","Pearly white","No",null,"Yes","Formic Acid and Honey Bee Healthy","-","2015 pkgs - conan - blonde bees",null,null,"-",{"$nulls":3},"-","Healthy had stayed healthy",2]
[]
["Hardin","651-700","39.1663 / -90.6189","2016-09-06","Diseased","twisting in cell, oxidizing, loss of definition, wet, displaced puddle, flattened, yellow lesion, bruised, spots, yellow liquid, drying","no",null,"Yes","HBH, formic acid, fumagilin","-","Package bees, very light colored queen","<1 year","Packages had full sun location","-",8,"no","no","-",null,3,"Hadn't noticed it before","no","No, this was the first year"]
[{"$nulls":4},"Healthy","Pearly white","no",null,"Yes","HBH, formic acid, fumagilin","-",null,"5 or 6 years","Healthy hive located up on hill, in treeline. More shade.","-",{"$nulls":3},"-","no"]
[]
["Kampsville","701-748","39.2964 / -90.6114","2016-09-15","Diseased","twisted in cell, odd coloration, loss of definition, yellowing, spots, oxidized, displaced","No",null,"Might have used peppermint oil,",null,"-","Package bees",null,"Bigger hives were healthier. Made so many splits - was stressful to them.","-",8,"No","No","-","No","Many","Fresh outbreak","No","No"]
[{"$nulls":4},"Healthy","Pearly white","No",null,"Nothing",null,"-","Unknown swarm queen",null,null,"-",{"$nulls":3},"-"]
[null,null," "]
["Dwight's Corner","892-923","39.1176 / -88.9024","2016-10-15","Diseased","twisting in cell, oxidized, displaced, spotty, sunken, loss of definition, moving in cell, slightly twisted, yellow hue","No",null,"Did not get HBH","Used Dave Dhom comb in other two LL nucs - then those nucs died - oxalic acid treatment in 2015","-","Unknown swarm queen","Always at that location","Gear/frames from a dead EFB hive ","-",10,"NO","No","-","Not before, not after - made lots of honey - had treatedf just after we sampled, just to be safe","9 out of 10 showed some level of disease","2015 was the first  year EFB had been seen in the apiary. This particular hive only first showed symptoms in 2016.","No","Yes"]
[{"$nulls":4},"Healthy","Pearly white","No",null,"Honey bee healthy when purchased, 2015","Oxalic acid vapor 2015. Then treated again same way after sample","-"," VP queen",null,"Had been new gear, and frames ","-",{"$nulls":3},"-"]
[]
["Hull","844-891","39.7559 / -91.205","2016-10-08","Diseased","misplaced, melted, thin, translucent, slightly flattened, misshapen, oxidized, flattening, oxidized, bruises, thin, translucent, loosely curled, oxidizing, yellow, twisting in cell, melting, misshapen, dull, dry, scabbed, gooey, wet, Varroa mite, sunken, deflated, brown","Yes","TetraBee in 2015 and 2016","No ",null,"-","Supercedure/swarm queen -","11 years - but two years considering splitting/swarming","Did not perform shook swarm onto sterilized equipment after treatment","-",6,"No","No","-","Yes - in 2015","Only the diseased hive. In 2015 , all hives had symptoms","In 2015 , all hives had symptoms","yes in 2015","Yes"]
[{"$nulls":4},"Healthy","Pearly white","Yes","TetraBee in 2015 and 2016","No ",null,"-","Supercedure/swarm queen -",null,"Performed shook swarm onto sterilized equipment after treatment","-",{"$nulls":3},"-"]
[]
[]
[]
[{"$nulls":8}," "]
[]
[{"$nulls":5}," "]

{"sheet":"Table S2 Reads by sample","index":1,"n_rows":279,"n_cols":11497,"rows_kept":7,"cut":true,"bounds":{"rows_first":3,"rows_last":1,"rows_between":3,"halvings":9}}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
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{"sheet":"Table S3 Alpha Diversity","index":2,"n_rows":279,"n_cols":28,"rows_kept":279}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
[]
["Table S3. Diversity metrics by site, age and phenotype."]
[]
["Site","Age","Phenotype","samples","variable","value","variable","value",null,null,"Site",{"$nulls":4},"Age",{"$nulls":4},"Phenotype"]
[1,"old","Healthy",327,"Shannon",0.597075057684694,"Observed",30]
[1,"old","Healthy",328,"Shannon",1.48074644102502,"Observed",29]
[1,"old","Healthy",329,"Shannon",0.592235447422899,"Observed",29]
[1,"old","Healthy",330,"Shannon",0.585818552925596,"Observed",26]
[1,"middle","Healthy",331,"Shannon",1.19224584191453,"Observed",28]
[1,"middle","Healthy",332,"Shannon",1.410801937753,"Observed",34]
[1,"middle","Healthy",333,"Shannon",1.70445039574106,"Observed",32]
[1,"middle","Healthy",334,"Shannon",1.43845394364226,"Observed",24]
[1,"young","Healthy",335,"Shannon",1.83815430837659,"Observed",47]
[1,"young","Healthy",337,"Shannon",0.679461116671818,"Observed",41]
[1,"young","Healthy",338,"Shannon",2.06733970629954,"Observed",40]
[1,"old","Healthy",339,"Shannon",0.327211001866321,"Observed",21]
[1,"old","Healthy",340,"Shannon",1.33180536769066,"Observed",24]
[1,"old","Healthy",341,"Shannon",1.88284063006964,"Observed",33]
[1,"old","Healthy",342,"Shannon",1.48418528925268,"Observed",17]
[1,"middle","Healthy",343,"Shannon",1.45583669057525,"Observed",19]
[1,"middle","Healthy",344,"Shannon",0.678825111835705,"Observed",27]
[1,"middle","Healthy",345,"Shannon",1.65723041647676,"Observed",27]
[1,"middle","Healthy",346,"Shannon",0.291912449304642,"Observed",19]
[1,"young","Healthy",347,"Shannon",1.17764021443928,"Observed",35]
[1,"young","Healthy",348,"Shannon",0.120313069710208,"Observed",26]
[1,"young","Healthy",349,"Shannon",0.200540837282923,"Observed",26]
[1,"young","Healthy",350,"Shannon",1.61768121411129,"Observed",36]
[1,"young","Diseased",351,"Shannon",0.0695277492649385,"Observed",24]
[1,"young","Diseased",352,"Shannon",0.757784900095146,"Observed",32,{"$nulls":19},"u"]
[1,"young","Diseased",353,"Shannon",0.432827193121186,"Observed",27]
[1,"young","Diseased",354,"Shannon",0.264739333267224,"Observed",24]
[1,"middle","Diseased",355,"Shannon",0.862317924423028,"Observed",16]
[1,"middle","Diseased",356,"Shannon",0.851685616190304,"Observed",17]
[1,"middle","Diseased",357,"Shannon",0.430000431066036,"Observed",22]
[1,"middle","Diseased",358,"Shannon",0.223879346171755,"Observed",19]
[1,"old","Diseased",359,"Shannon",1.05526383941122,"Observed",13]
[1,"old","Diseased",360,"Shannon",1.11930849269411,"Observed",17]
[1,"old","Diseased",361,"Shannon",0.783070062586346,"Observed",16]
[1,"old","Diseased",362,"Shannon",0.887153866161569,"Observed",17]
[1,"Unknown","Diseased",363,"Shannon",0.777691892171727,"Observed",18]
[1,"Unknown","Diseased",364,"Shannon",0.94459612870866,"Observed",13]
[1,"Unknown","Diseased",365,"Shannon",1.50869311612222,"Observed",21]
[1,"Unknown","Diseased",366,"Shannon",0.865562786180632,"Observed",20]
[1,"Unknown","Diseased",367,"Shannon",0.71105027580458,"Observed",16]
[1,"Unknown","Diseased",368,"Shannon",1.14584221072744,"Observed",19]
[1,"Unknown","Diseased",369,"Shannon",1.08873240219834,"Observed",24]
[1,"Unknown","Diseased",370,"Shannon",1.81813630020021,"Observed",22]
[1,"Unknown","Diseased",371,"Shannon",0.814986382603133,"Observed",14]
[1,"Unknown","Diseased",372,"Shannon",0.806458910356682,"Observed",15]
[1,"Unknown","Diseased",373,"Shannon",1.08075706788622,"Observed",22]
[1,"Unknown","Diseased",374,"Shannon",1.42108851044382,"Observed",25]
[2,"young","Healthy",387,"Shannon",1.76832998260381,"Observed",36]
[2,"young","Healthy",388,"Shannon",1.49133477771685,"Observed",38]
[2,"young","Healthy",389,"Shannon",0.30488269176029,"Observed",26]
[2,"young","Healthy",390,"Shannon",1.7082010229187,"Observed",37]
[2,"middle","Healthy",391,"Shannon",1.05564660872808,"Observed",33]
[2,"middle","Healthy",392,"Shannon",0.277721433528706,"Observed",31]
[2,"middle","Healthy",393,"Shannon",0.779061095939485,"Observed",31]
[2,"middle","Healthy",394,"Shannon",1.66572265105273,"Observed",36]
[2,"old","Healthy",395,"Shannon",1.39581244310326,"Observed",40]
[2,"old","Healthy",396,"Shannon",0.925414500047579,"Observed",29]
[2,"old","Healthy",397,"Shannon",1.08182625125374,"Observed",41]
[2,"old","Healthy",398,"Shannon",1.17861935406646,"Observed",29]
[2,"young","Healthy",399,"Shannon",1.53163063450669,"Observed",39]
[2,"young","Healthy",400,"Shannon",1.50411666173972,"Observed",35]
[2,"young","Healthy",401,"Shannon",1.50668295974085,"Observed",39]
[2,"young","Healthy",402,"Shannon",1.6245088603476,"Observed",38]
[2,"middle","Healthy",403,"Shannon",1.74383590258518,"Observed",37]
[2,"middle","Healthy",404,"Shannon",0.199146501503879,"Observed",33]
[2,"middle","Healthy",405,"Shannon",1.57844064546359,"Observed",38]
[2,"middle","Healthy",406,"Shannon",0.0898893023618882,"Observed",30]
[2,"old","Healthy",407,"Shannon",1.44305709661609,"Observed",36]
[2,"old","Healthy",408,"Shannon",1.52332978516626,"Observed",34]
[2,"old","Healthy",409,"Shannon",2.13830910806873,"Observed",55]
[2,"old","Healthy",410,"Shannon",0.896392902117031,"Observed",49]
[2,"young","Diseased",411,"Shannon",1.63062129667854,"Observed",35]
[2,"young","Diseased",412,"Shannon",1.83125445666874,"Observed",52]
[2,"young","Diseased",413,"Shannon",0.0786761120601832,"Observed",30]
[2,"young","Diseased",414,"Shannon",1.78991836422276,"Observed",40]
[2,"middle","Diseased",415,"Shannon",0.813015780325227,"Observed",41]
[2,"middle","Diseased",416,"Shannon",1.57890613078796,"Observed",30]
[2,"middle","Diseased",417,"Shannon",1.4140286154492,"Observed",31]
[2,"middle","Diseased",418,"Shannon",1.72775927882718,"Observed",41]
[2,"old","Diseased",419,"Shannon",0.0135289710892559,"Observed",14]
[2,"old","Diseased",420,"Shannon",1.76239329105421,"Observed",41]
[2,"old","Diseased",421,"Shannon",0.191111164036993,"Observed",37]
[2,"old","Diseased",422,"Shannon",1.6145358374799,"Observed",34]
[2,"Unknown","Diseased",423,"Shannon",0.737096709132693,"Observed",16]
[2,"Unknown","Diseased",424,"Shannon",0.654562331006966,"Observed",17]
[2,"Unknown","Diseased",425,"Shannon",1.08411920538839,"Observed",17]
[2,"Unknown","Diseased",426,"Shannon",1.31069073435038,"Observed",17]
[2,"Unknown","Diseased",427,"Shannon",1.13121313156991,"Observed",19]
[2,"Unknown","Diseased",428,"Shannon",0.717140676367506,"Observed",26]
[2,"Unknown","Diseased",429,"Shannon",0.64375728855581,"Observed",19]
[2,"Unknown","Diseased",430,"Shannon",0.875520022246556,"Observed",17]
[2,"Unknown","Diseased",431,"Shannon",0.295319671953711,"Observed",14]
[2,"Unknown","Diseased",432,"Shannon",1.17549887957106,"Observed",17]
[2,"Unknown","Diseased",433,"Shannon",0.0259259796004318,"Observed",14]
[2,"Unknown","Diseased",434,"Shannon",0.0209016720283496,"Observed",19]
[3,"young","Healthy",651,"Shannon",1.96652085624812,"Observed",38]
[3,"young","Healthy",652,"Shannon",2.28207359648166,"Observed",44]
[3,"young","Healthy",653,"Shannon",1.3574202737765,"Observed",37]
[3,"young","Healthy",654,"Shannon",2.10776072030739,"Observed",48]
[3,"middle","Healthy",655,"Shannon",1.75324391708298,"Observed",29]
[3,"middle","Healthy",656,"Shannon",1.80576576468536,"Observed",36]
[3,"middle","Healthy",657,"Shannon",1.54658625873798,"Observed",31]
[3,"middle","Healthy",658,"Shannon",1.61543689760223,"Observed",30]
[3,"old","Healthy",659,"Shannon",1.48765490134336,"Observed",25]
[3,"old","Healthy",660,"Shannon",1.03354188895365,"Observed",32]
[3,"old","Healthy",661,"Shannon",1.20881050423093,"Observed",24]
[3,"old","Healthy",662,"Shannon",1.8217448308802,"Observed",31]
[3,"young","Healthy",663,"Shannon",2.14828661622098,"Observed",47]
[3,"young","Healthy",664,"Shannon",2.26720940595239,"Observed",53]
[3,"young","Healthy",665,"Shannon",0.0579105105617982,"Observed",23]
[3,"young","Healthy",666,"Shannon",2.23725740840897,"Observed",46]
[3,"middle","Healthy",667,"Shannon",0.0253784659694282,"Observed",19]
[3,"middle","Healthy",668,"Shannon",1.671194991249,"Observed",31]
[3,"middle","Healthy",669,"Shannon",1.84421928219591,"Observed",27]
[3,"middle","Healthy",670,"Shannon",1.28777389978133,"Observed",32]
[3,"old","Healthy",671,"Shannon",0.561778233885136,"Observed",18]
[3,"old","Healthy",672,"Shannon",1.36747190829553,"Observed",41]
[3,"old","Healthy",673,"Shannon",0.113973454423302,"Observed",28]
[3,"old","Healthy",674,"Shannon",1.93532495235056,"Observed",38]
[3,"young","Diseased",675,"Shannon",2.00074281146557,"Observed",49]
[3,"young","Diseased",676,"Shannon",2.03181083227348,"Observed",37]
[3,"young","Diseased",677,"Shannon",1.92887947797428,"Observed",35]
[3,"young","Diseased",678,"Shannon",1.87447441774317,"Observed",32]
[3,"middle","Diseased",679,"Shannon",2.01229128587955,"Observed",42]
[3,"middle","Diseased",680,"Shannon",0.180790318884812,"Observed",32]
[3,"middle","Diseased",681,"Shannon",2.02452921129169,"Observed",34]
[3,"middle","Diseased",682,"Shannon",0.623526186069495,"Observed",26]
[3,"old","Diseased",683,"Shannon",0.439486433791751,"Observed",18]
[3,"old","Diseased",684,"Shannon",1.01866601923354,"Observed",31]
[3,"old","Diseased",685,"Shannon",0.78596380622667,"Observed",22]
[3,"old","Diseased",686,"Shannon",0.553748122390855,"Observed",20]
[3,"Unknown","Diseased",687,"Shannon",0.203381177936246,"Observed",29]
[3,"Unknown","Diseased",688,"Shannon",0.766613010554756,"Observed",31]
[3,"Unknown","Diseased",689,"Shannon",0.632098352723406,"Observed",18]
[3,"Unknown","Diseased",690,"Shannon",1.0005530383108,"Observed",34]
[3,"Unknown","Diseased",691,"Shannon",0.424185433713522,"Observed",25]
[3,"Unknown","Diseased",692,"Shannon",0.0457339710322206,"Observed",14]
[3,"Unknown","Diseased",693,"Shannon",0.569788733097315,"Observed",27]
[3,"Unknown","Diseased",694,"Shannon",1.28013693202941,"Observed",18]
[3,"Unknown","Diseased",695,"Shannon",0.823137172287994,"Observed",14]
[3,"Unknown","Diseased",696,"Shannon",1.53785377449587,"Observed",19]
[3,"Unknown","Diseased",697,"Shannon",0.179960581607597,"Observed",20]
[3,"Unknown","Diseased",698,"Shannon",1.0210668765362,"Observed",21]
[3,"Unknown","Diseased",699,"Shannon",1.18506819296585,"Observed",13]
[3,"Unknown","Diseased",700,"Shannon",1.12311969987249,"Observed",17]
[4,"middle","Healthy",701,"Shannon",0.208574466234149,"Observed",21]
[4,"middle","Healthy",702,"Shannon",0.670841822723759,"Observed",30]
[4,"middle","Healthy",703,"Shannon",1.35171695070517,"Observed",25]
[4,"middle","Healthy",704,"Shannon",0.403853955628387,"Observed",32]
[4,"old","Healthy",705,"Shannon",0.951312324030368,"Observed",34]
[4,"old","Healthy",706,"Shannon",1.89213452840868,"Observed",29]
[4,"old","Healthy",707,"Shannon",2.10944823454803,"Observed",29]
[4,"old","Healthy",708,"Shannon",1.93326089226338,"Observed",33]
[4,"young","Healthy",709,"Shannon",1.99713185738532,"Observed",31]
[4,"young","Healthy",710,"Shannon",1.84402806584299,"Observed",31]
[4,"young","Healthy",711,"Shannon",1.04184488197494,"Observed",32]
[4,"young","Healthy",712,"Shannon",1.6416468249702,"Observed",39]
[4,"young","Healthy",713,"Shannon",0.650375835833723,"Observed",30]
[4,"young","Healthy",714,"Shannon",0.233920418351575,"Observed",12]
[4,"young","Healthy",715,"Shannon",0.374079971212695,"Observed",23]
[4,"young","Healthy",716,"Shannon",0.361433642265248,"Observed",18]
[4,"middle","Healthy",717,"Shannon",0.881837708842918,"Observed",34]
[4,"middle","Healthy",718,"Shannon",0.73142333436502,"Observed",33]
[4,"middle","Healthy",719,"Shannon",0.967914678718424,"Observed",28]
[4,"middle","Healthy",720,"Shannon",0.248262115500756,"Observed",17]
[4,"old","Healthy",721,"Shannon",0.738887819381577,"Observed",21]
[4,"old","Healthy",722,"Shannon",0.791917045536508,"Observed",31]
[4,"old","Healthy",723,"Shannon",0.855990219953325,"Observed",30]
[4,"old","Healthy",724,"Shannon",1.23107616129357,"Observed",14]
[4,"young","Diseased",725,"Shannon",0.0721292469484942,"Observed",22]
[4,"young","Diseased",726,"Shannon",1.13911394179191,"Observed",38]
[4,"young","Diseased",727,"Shannon",0.199865676869396,"Observed",32]
[4,"young","Diseased",728,"Shannon",1.88753891665271,"Observed",34]
[4,"middle","Diseased",729,"Shannon",1.20114629578895,"Observed",41]
[4,"middle","Diseased",730,"Shannon",0.102804224089934,"Observed",14]
[4,"middle","Diseased",731,"Shannon",0.0390387123150614,"Observed",20]
[4,"middle","Diseased",732,"Shannon",0.327033120909741,"Observed",25]
[4,"old","Diseased",733,"Shannon",1.77067746887902,"Observed",33]
[4,"old","Diseased",734,"Shannon",0.619143459788103,"Observed",6]
[4,"old","Diseased",735,"Shannon",1.03789234704337,"Observed",12]
[4,"old","Diseased",736,"Shannon",0.311671283534783,"Observed",19]
[4,"Unknown","Diseased",737,"Shannon",0.623478143402223,"Observed",15]
[4,"Unknown","Diseased",738,"Shannon",0.722642949880797,"Observed",14]
[4,"Unknown","Diseased",739,"Shannon",0.695776621643217,"Observed",13]
[4,"Unknown","Diseased",740,"Shannon",0.612831596576192,"Observed",15]
[4,"Unknown","Diseased",741,"Shannon",0.353313503532438,"Observed",14]
[4,"Unknown","Diseased",742,"Shannon",0.652308616930619,"Observed",13]
[4,"Unknown","Diseased",743,"Shannon",0.650580366266676,"Observed",16]
[4,"Unknown","Diseased",744,"Shannon",1.03021154450572,"Observed",14]
[4,"Unknown","Diseased",745,"Shannon",1.22443019137592,"Observed",18]
[4,"Unknown","Diseased",746,"Shannon",0.693715940746383,"Observed",16]
[4,"Unknown","Diseased",747,"Shannon",0.568549681629151,"Observed",11]
[4,"Unknown","Diseased",748,"Shannon",0.739260786707653,"Observed",18]
[5,"young","Healthy",892,"Shannon",2.15024620001542,"Observed",36]
[5,"young","Healthy",893,"Shannon",2.22863687372543,"Observed",34]
[5,"young","Healthy",894,"Shannon",2.12309971764912,"Observed",32]
[5,"young","Healthy",895,"Shannon",1.13732764031509,"Observed",30]
[5,"middle","Healthy",896,"Shannon",1.53954173889983,"Observed",37]
[5,"middle","Healthy",897,"Shannon",0.408358023339424,"Observed",27]
[5,"middle","Healthy",898,"Shannon",0.23290618439645,"Observed",28]
[5,"middle","Healthy",899,"Shannon",1.01533220251491,"Observed",26]
[5,"old","Healthy",900,"Shannon",0.499429321414803,"Observed",24]
[5,"old","Healthy",901,"Shannon",0.340495625009209,"Observed",28]
[5,"old","Healthy",902,"Shannon",0.722167184911013,"Observed",20]
[5,"old","Healthy",903,"Shannon",0.387390168550285,"Observed",24]
[5,"young","Diseased",904,"Shannon",0.0952731042199484,"Observed",18]
[5,"young","Diseased",905,"Shannon",2.27488423539243,"Observed",36]
[5,"young","Diseased",906,"Shannon",0.112647979340987,"Observed",27]
[5,"young","Diseased",907,"Shannon",0.0987736566787719,"Observed",24]
[5,"middle","Diseased",908,"Shannon",0.595290619711513,"Observed",24]
[5,"middle","Diseased",909,"Shannon",0.613200230000485,"Observed",29]
[5,"middle","Diseased",910,"Shannon",1.42748173303253,"Observed",32]
[5,"middle","Diseased",911,"Shannon",1.965568497253,"Observed",37]
[5,"old","Diseased",912,"Shannon",0.172992899638077,"Observed",33]
[5,"old","Diseased",913,"Shannon",0.0536695394663918,"Observed",23]
[5,"old","Diseased",914,"Shannon",1.10749859720019,"Observed",24]
[5,"old","Diseased",915,"Shannon",1.27828649086108,"Observed",39]
[5,"Unknown","Diseased",916,"Shannon",0.387471530564183,"Observed",22]
[5,"Unknown","Diseased",917,"Shannon",1.25773863891565,"Observed",21]
[5,"Unknown","Diseased",918,"Shannon",0.145723304937845,"Observed",21]
[5,"Unknown","Diseased",919,"Shannon",0.635492011735948,"Observed",28]
[5,"Unknown","Diseased",920,"Shannon",0.609167118663347,"Observed",16]
[5,"Unknown","Diseased",921,"Shannon",0.666977704536315,"Observed",17]
[5,"Unknown","Diseased",922,"Shannon",0.526838494099427,"Observed",17]
[5,"Unknown","Diseased",923,"Shannon",0.733440412083828,"Observed",15]
[6,"young","Healthy",844,"Shannon",2.04954677318468,"Observed",37]
[6,"young","Healthy",845,"Shannon",2.62843867814772,"Observed",70]
[6,"young","Healthy",846,"Shannon",2.0693618715223,"Observed",33]
[6,"young","Healthy",847,"Shannon",2.06262392125707,"Observed",38]
[6,"middle","Healthy",848,"Shannon",1.89927549630429,"Observed",34]
[6,"middle","Healthy",849,"Shannon",1.92902627038663,"Observed",27]
[6,"middle","Healthy",850,"Shannon",1.73206664745421,"Observed",27]
[6,"middle","Healthy",851,"Shannon",1.83709136134587,"Observed",31]
[6,"old","Healthy",852,"Shannon",1.87795390154239,"Observed",36]
[6,"old","Healthy",853,"Shannon",2.04280523516762,"Observed",33]
[6,"old","Healthy",854,"Shannon",2.24124935634976,"Observed",43]
[6,"old","Healthy",855,"Shannon",2.19816764975255,"Observed",35]
[6,"young","Healthy",856,"Shannon",1.79832590200143,"Observed",24]
[6,"young","Healthy",857,"Shannon",1.91403325595077,"Observed",33]
[6,"young","Healthy",858,"Shannon",2.09453991922365,"Observed",36]
[6,"young","Healthy",859,"Shannon",2.04331343765094,"Observed",36]
[6,"middle","Healthy",860,"Shannon",1.87449732438653,"Observed",33]
[6,"middle","Healthy",861,"Shannon",1.81366383443358,"Observed",35]
[6,"middle","Healthy",862,"Shannon",1.86154487933558,"Observed",38]
[6,"middle","Healthy",863,"Shannon",1.86532961614704,"Observed",28]
[6,"old","Healthy",864,"Shannon",1.96992855166606,"Observed",32]
[6,"old","Healthy",865,"Shannon",2.10237944683882,"Observed",34]
[6,"old","Healthy",866,"Shannon",1.83140536741071,"Observed",38]
[6,"old","Healthy",867,"Shannon",1.75351391700172,"Observed",32]
[6,"Unknown","Diseased",868,"Shannon",1.7930436942651,"Observed",32]
[6,"Unknown","Diseased",869,"Shannon",1.91349839968686,"Observed",32]
[6,"Unknown","Diseased",870,"Shannon",1.72373576494484,"Observed",28]
[6,"Unknown","Diseased",871,"Shannon",0.991155263616158,"Observed",26]
[6,"Unknown","Diseased",872,"Shannon",1.91138605645818,"Observed",33]
[6,"Unknown","Diseased",873,"Shannon",1.95735388603817,"Observed",29]
[6,"Unknown","Diseased",874,"Shannon",1.7633110778256,"Observed",25]
[6,"Unknown","Diseased",875,"Shannon",1.79588488049137,"Observed",31]
[6,"Unknown","Diseased",876,"Shannon",2.05881134592431,"Observed",29]
[6,"Unknown","Diseased",877,"Shannon",0.129995822157598,"Observed",24]
[6,"Unknown","Diseased",878,"Shannon",1.96226026044622,"Observed",32]
[6,"Unknown","Diseased",879,"Shannon",2.08809081538878,"Observed",39]
[6,"Unknown","Diseased",880,"Shannon",1.91742650380794,"Observed",33]
[6,"Unknown","Diseased",881,"Shannon",1.87609303239144,"Observed",29]
[6,"Unknown","Diseased",882,"Shannon",1.40764031431781,"Observed",32]
[6,"Unknown","Diseased",883,"Shannon",1.84467348175783,"Observed",37]
[6,"Unknown","Diseased",884,"Shannon",1.75036600499738,"Observed",29]
[6,"Unknown","Diseased",885,"Shannon",0.385805585392963,"Observed",36]
[6,"Unknown","Diseased",886,"Shannon",1.94798177614689,"Observed",33]
[6,"Unknown","Diseased",887,"Shannon",0.473085263164997,"Observed",13]
[6,"Unknown","Diseased",888,"Shannon",2.03583640943031,"Observed",34]
[6,"Unknown","Diseased",889,"Shannon",0.0126278982215934,"Observed",15]
[6,"Unknown","Diseased",890,"Shannon",0.155754273466804,"Observed",21]
[6,"Unknown","Diseased",891,"Shannon",0.615311596690122,"Observed",19]

{"sheet":"Table S4 Bactiquant","index":3,"n_rows":284,"n_cols":16,"rows_kept":284}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
[]
["Table S4. Bactiquant results based on qPCR with universal 16S rRNA gene primers."]
[null,null,"Sample KEY"]
[null,null,"HH = Healthy Hive"]
[null,null,"DH, HF = diseased hive, healthy frame"]
[null,null,"DH, DF, BS  = diseased hive, diseased frame, brood stages"]
[null,null,"AD = Advanced Disease"]
[]
["Site","Age","Sample Description","Library #","Cq Avg","Bact total "]
["1. Spring Valley","old","HH",327,{"v":22.7870687918218,"d":"22.79"},{"v":15332037.54409957,"d":"1.53E+07"}]
[null,"old","HH",328,26.35,{"v":1924860.733457384,"d":"1.92E+06"}]
[null,"old","HH",329,22.64,{"v":16703179.74482727,"d":"1.67E+07"}]
[null,"old","HH",330,22.33,{"v":20008287.67941514,"d":"2.00E+07"}]
[null,"middle","HH",331,25.63,{"v":2927619.6014424707,"d":"2.93E+06"}]
[null,"middle","HH",332,26.54,{"v":1723221.48294219,"d":"1.72E+06"}]
[null,"middle","HH",333,31.13,{"v":118947.64597082355,"d":"1.19E+05"}]
[null,"middle","HH",334,26.83,{"v":1455422.5216661126,"d":"1.46E+06"}]
[null,"young","HH",335,30.07,{"v":220531.2260748918,"d":"2.21E+05"}]
[null,"young","HH",337,27.29,{"v":1113365.1630856453,"d":"1.11E+06"}]
[null,"young","HH",338,30.01,{"v":228373.8480684638,"d":"2.28E+05"}]
[null,"old","DH, HF",339,20.16,{"v":70808484.93763699,"d":"7.08E+07"}]
[null,"old","DH, HF",340,24.01,{"v":7520975.0122113805,"d":"7.52E+06"}]
[null,"old","DH, HF",341,30.72,{"v":151029.02414437116,"d":"1.51E+05"}]
[null,"old","DH, HF",342,16.03,{"v":784727889.5297673,"d":"7.85E+08"}]
[null,"middle","DH, HF",343,22.09,{"v":23009916.045749206,"d":"2.30E+07"}]
[null,"middle","DH, HF",344,23.11,{"v":12703351.413795965,"d":"1.27E+07"}]
[null,"middle","DH, HF",345,{"v":27.9,"d":"27.90"},{"v":780450.6937326806,"d":"7.80E+05"}]
[null,"middle","DH, HF",346,20.15,{"v":71222084.72852567,"d":"7.12E+07"}]
[null,"young","DH, HF",347,29.04,{"v":401787.2892963386,"d":"4.02E+05"}]
[null,"young","DH, HF",348,23.16,{"v":12338757.077963827,"d":"1.23E+07"}]
[null,"young","DH, HF",349,31.73,{"v":83867.37961563465,"d":"8.39E+04"}]
[null,"young","DH, HF",350,30.97,{"v":130564.74521521413,"d":"1.31E+05"}]
[null,"young","DH, DF, BS",351,23.07,{"v":13002768.506064942,"d":"1.30E+07"}]
[null,"young","DH, DF, BS",352,27.78,{"v":836947.1339690738,"d":"8.37E+05"}]
[null,"young","DH, DF, BS",353,{"v":26.059545551016736,"d":"26.06"},{"v":2279640.0048761587,"d":"2.28E+06"}]
[null,"young","DH, DF, BS",354,{"v":25.353684747373165,"d":"25.35"},{"v":3438786.89740333,"d":"3.44E+06"}]
[null,"middle","DH, DF, BS",355,{"v":16.32213180934537,"d":"16.32"},{"v":661954079.8074452,"d":"6.62E+08"}]
[null,"middle","DH, DF, BS",356,{"v":18.8064659042897,"d":"18.81"},{"v":155756241.4266141,"d":"1.56E+08"}]
[null,"middle","DH, DF, BS",357,{"v":21.219639776684165,"d":"21.22"},{"v":38199895.580949776,"d":"3.82E+07"}]
[null,"middle","DH, DF, BS",358,{"v":18.899333934543733,"d":"18.90"},{"v":147555570.0502264,"d":"1.48E+08"}]
[null,"old","DH, DF, BS",359,{"v":15.252605573732732,"d":"15.25"},{"v":1234103688.2374165,"d":"1.23E+09"}]
[null,"old","DH, DF, BS",360,{"v":15.4064187620305,"d":"15.41"},{"v":1128356813.6666687,"d":"1.13E+09"}]
[null,"old","DH, DF, BS",361,{"v":16.311344857648567,"d":"16.31"},{"v":666125858.2063264,"d":"6.66E+08"}]
[null,"old","DH, DF, BS",362,{"v":14.697426954945998,"d":"14.70"},{"v":1705208147.3302274,"d":"1.71E+09"}]
[null,"diseased","flattened, translucent, oxidized, wet",363,{"v":19.000909871995233,"d":"19.00"},{"v":139079524.62100944,"d":"1.39E+08"}]
[null,"diseased","oxidizing brown, flattening, loosing definition",364,{"v":16.084759159091032,"d":"16.08"},{"v":760095948.6689526,"d":"7.60E+08"}]
[null,"diseased","oxidizing brown, wet",365,{"v":12.929861580278933,"d":"12.93"},{"v":4773773219.172006,"d":"4.77E+09"}]
[null,"diseased","oxidizing brown, flattening, wet, spots",366,{"v":16.695021509588766,"d":"16.70"},{"v":532733370.7444147,"d":"5.33E+08"}]
[null,"diseased","oxidizing brown, shriveling, dry",367,{"v":15.823306763992898,"d":"15.82"},{"v":885114904.4380469,"d":"8.85E+08"}]
[null,"diseased","oxidized brown, shriveling, dry, hardening",368,{"v":15.597275529798667,"d":"15.60"},{"v":1009651590.5241059,"d":"1.01E+09"}]
[null,"diseased","oxidized brown, shriveling, dry",369,{"v":17.524556585384033,"d":"17.52"},{"v":328616215.7076452,"d":"3.29E+08"}]
[null,"diseased","oxidized yellow, misplaced, loss of definition",370,{"v":14.991459935933468,"d":"14.99"},{"v":1436829697.7753942,"d":"1.44E+09"}]
[null,"diseased","oxidized brown, misplaced, loss of definition",371,{"v":16.508261912175467,"d":"16.51"},{"v":593948095.6187003,"d":"5.94E+08"}]
[null,"diseased","oxidized brown, misplaced, flat, yellow spot",372,{"v":15.704909409374102,"d":"15.70"},{"v":948302377.8630134,"d":"9.48E+08"}]
[null,"diseased","brown, flat, scaley",373,{"v":16.158727739860836,"d":"16.16"},{"v":728046227.1270072,"d":"7.28E+08"}]
[null,"diseased","brown, flat,scabby, loss of definition",374,{"v":15.765005201475534,"d":"15.77"},{"v":915685489.8823318,"d":"9.16E+08"}]
["2. Butler","young","HH",387,{"v":32.2139343118125,"d":"32.21"},{"v":63268.525778652824,"d":"6.33E+04"}]
[null,"young","HH",388,32.08,{"v":68401.36792282452,"d":"6.84E+04"}]
[null,"young","HH",389,{"v":25.694919726765335,"d":"25.69"},{"v":2818992.905057511,"d":"2.82E+06"}]
[null,"young","HH",390,{"v":30.708680195519204,"d":"30.71"},{"v":152028.01482639654,"d":"1.52E+05"}]
[null,"middle","HH",391,{"v":28.379253440600834,"d":"28.38"},{"v":590369.7304051435,"d":"5.90E+05"}]
[null,"middle","HH",392,{"v":25.700360898187437,"d":"25.70"},{"v":2810073.6591373943,"d":"2.81E+06"}]
[null,"middle","HH",393,{"v":27.039809720114402,"d":"27.04"},{"v":1288013.0044019055,"d":"1.29E+06"}]
[null,"middle","HH",394,{"v":31.536618370213734,"d":"31.54"},{"v":93865.63649743279,"d":"9.39E+04"}]
[null,"old","HH",395,{"v":26.471353812690566,"d":"26.47"},{"v":1793512.1659820783,"d":"1.79E+06"}]
[null,"old","HH",396,{"v":23.019827961604104,"d":"23.02"},{"v":13388324.925944164,"d":"1.34E+07"}]
[null,"old","HH",397,{"v":29.174131582033237,"d":"29.17"},{"v":371594.4547517116,"d":"3.72E+05"}]
[null,"old","HH",398,{"v":28.377873722175668,"d":"28.38"},{"v":590844.3205922516,"d":"5.91E+05"}]
[null,"young","DH, HF",399,{"v":32.3262939843948,"d":"32.33"},{"v":59260.824342636915,"d":"5.93E+04"}]
[null,"young","DH, HF",400,{"v":32.482848637681435,"d":"32.48"},{"v":54096.48827144708,"d":"5.41E+04"}]
[null,"young","DH, HF",401,{"v":31.6217135694057,"d":"31.62"},{"v":89327.01530753377,"d":"8.93E+04"}]
[null,"young","DH, HF",402,{"v":31.454819959092998,"d":"31.45"},{"v":98445.65500383389,"d":"9.84E+04"}]
[null,"middle","DH, HF",403,{"v":31.506798230878363,"d":"31.51"},{"v":95510.09448819804,"d":"9.55E+04"}]
[null,"middle","DH, HF",404,{"v":26.135555340542,"d":"26.14"},{"v":2180923.8828992974,"d":"2.18E+06"}]
[null,"middle","DH, HF",405,{"v":31.618472956475667,"d":"31.62"},{"v":89495.76756447549,"d":"8.95E+04"}]
[null,"middle","DH, HF",406,{"v":24.100571445562633,"d":"24.10"},{"v":7134527.049477518,"d":"7.13E+06"}]
[null,"old","DH, HF",407,{"v":31.05168132817143,"d":"31.05"},{"v":124498.92940804566,"d":"1.24E+05"}]
[null,"old","DH, HF",408,{"v":31.537908888792867,"d":"31.54"},{"v":93795.11242298479,"d":"9.38E+04"}]
[null,"old","DH, HF",409,{"v":30.991301046021466,"d":"30.99"},{"v":128954.96930295655,"d":"1.29E+05"}]
[null,"old","DH, HF",410,{"v":28.491661488413268,"d":"28.49"},{"v":552957.5847486693,"d":"5.53E+05"}]
[null,"young","DH, DF, BS",411,{"v":31.20741053295127,"d":"31.21"},{"v":113704.01205549849,"d":"1.14E+05"}]
[null,"young","DH, DF, BS",412,30.47,{"v":174700.80530853017,"d":"1.75E+05"}]
[null,"young","DH, DF, BS",413,{"v":23.792851581154334,"d":"23.79"},{"v":8534915.474415192,"d":"8.53E+06"}]
[null,"young","DH, DF, BS",414,30.91,{"v":135207.94228365255,"d":"1.35E+05"}]
[null,"middle","DH, DF, BS",415,{"v":28.58627635752647,"d":"28.59"},{"v":523311.3176078994,"d":"5.23E+05"}]
[null,"middle","DH, DF, BS",416,{"v":30.490249230395865,"d":"30.49"},{"v":172652.5940414157,"d":"1.73E+05"}]
[null,"middle","DH, DF, BS",417,{"v":30.694667566388933,"d":"30.69"},{"v":153273.8090857874,"d":"1.53E+05"}]
[null,"middle","DH, DF, BS",418,{"v":29.720812753291366,"d":"29.72"},{"v":270266.8642318478,"d":"2.70E+05"}]
[null,"old","DH, DF, BS",419,{"v":15.1729953823442,"d":"15.17"},{"v":1292671249.9724383,"d":"1.29E+09"}]
[null,"old","DH, DF, BS",420,{"v":30.2910085671159,"d":"30.29"},{"v":193895.9042145918,"d":"1.94E+05"}]
[null,"old","DH, DF, BS",421,{"v":22.76905778382643,"d":"22.77"},{"v":15493714.239165038,"d":"1.55E+07"}]
[null,"old","DH, DF, BS",422,{"v":30.606425506141704,"d":"30.61"},{"v":161356.96530223082,"d":"1.61E+05"}]
[null,"diseased","oxidized brown, flattening, losing definition",423,{"v":16.000704975423634,"d":"16.00"},{"v":798231591.3315864,"d":"7.98E+08"}]
[null,"diseased","misshapen, scabbed",424,{"v":15.126889175969033,"d":"15.13"},{"v":1327853307.7653553,"d":"1.33E+09"}]
[null,"diseased","loss of definiiton, wet, yellow",425,{"v":12.778493280586034,"d":"12.78"},{"v":5213730434.553113,"d":"5.21E+09"}]
[null,"diseased","twisted in cell, oxidized yellow",426,14.01,{"v":2544800681.8751583,"d":"2.54E+09"}]
[null,"diseased","tesied in cell, oxidized yellow, dry",427,{"v":14.203921738234499,"d":"14.20"},{"v":2273021811.114798,"d":"2.27E+09"}]
[null,"diseased","displaced, oxidized yellow, dry",428,18.38,{"v":199670946.0300515,"d":"2.00E+08"}]
[null,"diseased","flattened, oxidized brown, gooey, loss of definition",429,{"v":16.354626717077167,"d":"16.35"},{"v":649544137.5836849,"d":"6.50E+08"}]
[null,"diseased","twisted in cell, oxidized yellow",430,{"v":15.579858362529231,"d":"15.58"},{"v":1019945571.3443668,"d":"1.02E+09"}]
[null,"diseased","brown, flattening",431,{"v":17.113377766321502,"d":"17.11"},{"v":417533881.54232174,"d":"4.18E+08"}]
[null,"diseased","oxidized brown, flattening",432,{"v":15.723045869435333,"d":"15.72"},{"v":938338293.69056,"d":"9.38E+08"}]
[null,"diseased","oxidized brown, flattening, gooey",433,{"v":16.9831760558349,"d":"16.98"},{"v":450427272.41447985,"d":"4.50E+08"}]
[null,"diseased","oxidized brown, flattening, gooey",434,{"v":16.215912355319233,"d":"16.22"},{"v":704198013.2872932,"d":"7.04E+08"}]
["3. Hardin","young","HH",651,{"v":31.39480061626823,"d":"31.39"},{"v":2057075.8124193999,"d":"2.06E+06"}]
[null,"young","HH",652,{"v":31.54096379941417,"d":"31.54"},{"v":1902377.9108331248,"d":"1.90E+06"}]
[null,"young","HH",653,30.42,{"v":3185222.3903660877,"d":"3.19E+06"}]
[null,"young","HH",654,{"v":31.605935107314966,"d":"31.61"},{"v":1839101.837909875,"d":"1.84E+06"}]
[null,"middle","HH",655,30.15,{"v":3702855.4014880834,"d":"3.70E+06"}]
[null,"middle","HH",656,{"v":30.54747872873273,"d":"30.55"},{"v":3238380.7497320836,"d":"3.24E+06"}]
[null,"middle","HH",657,{"v":29.243931136364903,"d":"29.24"},{"v":6545446.485943442,"d":"6.55E+06"}]
[null,"middle","HH",658,29.72,{"v":4676887.894406225,"d":"4.68E+06"}]
[null,"old","HH",659,{"v":29.490601846786465,"d":"29.49"},{"v":5723155.512142013,"d":"5.72E+06"}]
[null,"old","HH",660,{"v":26.418947931260732,"d":"26.42"},{"v":29903449.683951005,"d":"2.99E+07"}]
[null,"old","HH",661,{"v":28.331960908078532,"d":"28.33"},{"v":10687694.326498814,"d":"1.07E+07"}]
[null,"old","HH",662,{"v":30.566794259373566,"d":"30.57"},{"v":3228999.676491542,"d":"3.23E+06"}]
[null,"young","DH, HF",663,{"v":30.79129961166467,"d":"30.79"},{"v":2839789.7513952414,"d":"2.84E+06"}]
[null,"young","DH, HF",664,{"v":30.98728056043393,"d":"30.99"},{"v":2560163.883726671,"d":"2.56E+06"}]
[null,"young","DH, HF",665,22.93,{"v":184782311.10630038,"d":"1.85E+08"}]
[null,"young","DH, HF",666,30.92,{"v":2438664.8699595626,"d":"2.44E+06"}]
[null,"middle","DH, HF",667,{"v":18.198519011611765,"d":"18.20"},{"v":2503999190.8462753,"d":"2.50E+09"}]
[null,"middle","DH, HF",668,{"v":30.665674528074998,"d":"30.67"},{"v":3036523.928328571,"d":"3.04E+06"}]
[null,"middle","DH, HF",669,{"v":30.267727820029535,"d":"30.27"},{"v":3762120.974043104,"d":"3.76E+06"}]
[null,"middle","DH, HF",670,{"v":27.708950228713434,"d":"27.71"},{"v":14931191.847903168,"d":"1.49E+07"}]
[null,"old","DH, HF",671,{"v":14.9670234520593,"d":"14.97"},{"v":14352060756.667833,"d":"1.44E+10"}]
[null,"old","DH, HF",672,{"v":30.556145190518865,"d":"30.56"},{"v":3223231.4482831205,"d":"3.22E+06"}]
[null,"old","DH, HF",673,{"v":19.663902560990767,"d":"19.66"},{"v":1140506177.951087,"d":"1.14E+09"}]
[null,"old","DH, HF",674,{"v":30.397947551234665,"d":"30.40"},{"v":3507396.9370163255,"d":"3.51E+06"}]
[null,"young","DH, DF, BS",675,{"v":30.796061710749168,"d":"30.80"},{"v":3003845.248629742,"d":"3.00E+06"}]
[null,"young","DH, DF, BS",676,{"v":31.11917092712943,"d":"31.12"},{"v":2519700.905864729,"d":"2.52E+06"}]
[null,"young","DH, DF, BS",677,{"v":31.5725523718864,"d":"31.57"},{"v":1979112.1762743292,"d":"1.98E+06"}]
[null,"young","DH, DF, BS",678,{"v":31.23811039791087,"d":"31.24"},{"v":2370685.9220146746,"d":"2.37E+06"}]
[null,"middle","DH, DF, BS",679,28.17,{"v":10785829.14665263,"d":"1.08E+07"}]
[null,"middle","DH, DF, BS",680,{"v":25.113190925874765,"d":"25.11"},{"v":62271270.491867736,"d":"6.23E+07"}]
[null,"middle","DH, DF, BS",681,{"v":29.80748920583673,"d":"29.81"},{"v":5075822.729261912,"d":"5.08E+06"}]
[null,"middle","DH, DF, BS",682,27.38,{"v":16693031.632779084,"d":"1.67E+07"}]
[null,"old","DH, DF, BS",683,{"v":15.845928131179235,"d":"15.85"},{"v":8806887287.633724,"d":"8.81E+09"}]
[null,"old","DH, DF, BS",684,{"v":24.108612024957097,"d":"24.11"},{"v":106510392.09977247,"d":"1.07E+08"}]
[null,"old","DH, DF, BS",685,{"v":18.445982892819302,"d":"18.45"},{"v":2194014117.342133,"d":"2.19E+09"}]
[null,"old","DH, DF, BS",686,{"v":15.083136320684268,"d":"15.08"},{"v":13225343698.6565,"d":"1.32E+10"}]
[null,"diseased","twisting in cell",687,{"v":21.581734546207333,"d":"21.58"},{"v":411409272.9987954,"d":"4.11E+08"}]
[null,"diseased","twisting in cell",688,{"v":21.789212303397335,"d":"21.79"},{"v":368371692.65349036,"d":"3.68E+08"}]
[null,"diseased","twisting in cell, oxidizing, loss of definition",689,{"v":15.335961679301333,"d":"15.34"},{"v":11566063212.550098,"d":"1.16E+10"}]
[null,"diseased","twisting in cell",690,{"v":26.302053564929036,"d":"26.30"},{"v":33116214.631188996,"d":"3.31E+07"}]
[null,"diseased","wet, displaced puddle",691,15.97,{"v":8078792588.524045,"d":"8.08E+09"}]
[null,"diseased","wet, displaced puddle",692,{"v":15.971383476701668,"d":"15.97"},{"v":8233682820.963304,"d":"8.23E+09"}]
[null,"diseased","wet, oxidized, displaced, flattened, yellow lesion",693,{"v":16.382261206914766,"d":"16.38"},{"v":6610502562.156992,"d":"6.61E+09"}]
[null,"diseased","oxidized, bruised, flattened, spots",694,15.47,{"v":10547833057.104012,"d":"1.05E+10"}]
[null,"diseased","oxidized brown, flattened, yellow lesion, loss of definition",695,15.57,{"v":26114241494.316624,"d":"2.61E+10"}]
[null,"diseased","oxidized brown, flattening, yellow liquid",696,{"v":15.487994842071249,"d":"15.49"},{"v":10029033105.964529,"d":"1.00E+10"}]
[null,"diseased","oxidized, displaced, twisted, loss of definition",697,{"v":15.344483083575133,"d":"15.34"},{"v":11513623900.182962,"d":"1.15E+10"}]
[null,"diseased","oxidized brown, displaced, twisted, drying",698,{"v":15.019297186484835,"d":"15.02"},{"v":13681872147.090208,"d":"1.37E+10"}]
[null,"diseased","oxidized brown, flattening, twisted",699,13.62,{"v":29752488604.641293,"d":"2.98E+10"}]
[null,"diseased","oxidized brown, flattening, twisted",700,15.69,{"v":9568655172.98846,"d":"9.57E+09"}]
["4. Kampsville","old","HH",701,{"v":20.452935658465368,"d":"20.45"},{"v":706116141.0573629,"d":"7.06E+08"}]
[null,"old","HH",702,{"v":24.1262246147967,"d":"24.13"},{"v":94299845.81672512,"d":"9.43E+07"}]
[null,"old","HH",703,{"v":26.94403147306947,"d":"26.94"},{"v":20185144.57153596,"d":"2.02E+07"}]
[null,"old","HH",704,{"v":19.166981283429234,"d":"19.17"},{"v":1425269871.9582126,"d":"1.43E+09"}]
[null,"young","HH",705,{"v":27.68470162700433,"d":"27.68"},{"v":13459991.461303307,"d":"1.35E+07"}]
[null,"young","HH",706,{"v":31.209222457431867,"d":"31.21"},{"v":1948647.7490445704,"d":"1.95E+06"}]
[null,"young","HH",707,{"v":31.05238786425183,"d":"31.05"},{"v":2122669.0396899288,"d":"2.12E+06"}]
[null,"young","HH",708,{"v":30.73167060907367,"d":"30.73"},{"v":2533650.8218798167,"d":"2.53E+06"}]
[null,"middle","HH",709,{"v":30.128622756673597,"d":"30.13"},{"v":3524348.366299529,"d":"3.52E+06"}]
[null,"middle","HH",710,{"v":30.5142910218446,"d":"30.51"},{"v":2859333.5066375835,"d":"2.86E+06"}]
[null,"middle","HH",711,{"v":27.021546273403235,"d":"27.02"},{"v":19441246.412837043,"d":"1.94E+07"}]
[null,"middle","HH",712,{"v":28.82947682409137,"d":"28.83"},{"v":7174263.991756429,"d":"7.17E+06"}]
[null,"young","DH, HF",713,{"v":25.4507417261302,"d":"25.45"},{"v":45626610.82392663,"d":"4.56E+07"}]
[null,"young","DH, HF",714,{"v":19.361597289530067,"d":"19.36"},{"v":1280741318.0405252,"d":"1.28E+09"}]
[null,"young","DH, HF",715,{"v":20.9095899586483,"d":"20.91"},{"v":548944208.2041832,"d":"5.49E+08"}]
[null,"young","DH, HF",716,{"v":20.502035157171832,"d":"20.50"},{"v":685847376.8973961,"d":"6.86E+08"}]
[null,"middle","DH, HF",717,{"v":26.650973924502534,"d":"26.65"},{"v":23727466.839438748,"d":"2.37E+07"}]
[null,"middle","DH, HF",718,{"v":21.159440949158466,"d":"21.16"},{"v":478939421.0266929,"d":"4.79E+08"}]
[null,"middle","DH, HF",719,{"v":24.309878175179403,"d":"24.31"},{"v":85864652.14585283,"d":"8.59E+07"}]
[null,"middle","DH, HF",720,{"v":16.936537723825598,"d":"16.94"},{"v":4838580801.768067,"d":"4.84E+09"}]
[null,"old","DH, HF",721,{"v":15.3922953811502,"d":"15.39"},{"v":11280430088.394924,"d":"1.13E+10"}]
[null,"old","DH, HF",722,{"v":22.475014501970033,"d":"22.48"},{"v":232864764.62770662,"d":"2.33E+08"}]
[null,"old","DH, HF",723,{"v":25.401795542446735,"d":"25.40"},{"v":81016505.48880413,"d":"8.10E+07"}]
[null,"old","DH, HF",724,{"v":15.313704784513599,"d":"15.31"},{"v":17980062148.97546,"d":"1.80E+10"}]
[null,"young","DH, DF, BS",725,{"v":23.753061962810765,"d":"23.75"},{"v":196898271.1407608,"d":"1.97E+08"}]
[null,"young","DH, DF, BS",726,{"v":29.7540206942901,"d":"29.75"},{"v":7884518.156098479,"d":"7.88E+06"}]
[null,"young","DH, DF, BS",727,{"v":26.264884554500668,"d":"26.26"},{"v":51063069.599455245,"d":"5.11E+07"}]
[null,"young","DH, DF, BS",728,{"v":32.419992425464336,"d":"32.42"},{"v":1890614.4427141836,"d":"1.89E+06"}]
[null,"middle","DH, DF, BS",729,{"v":28.033981478337697,"d":"28.03"},{"v":19791040.98741067,"d":"1.98E+07"}]
[null,"middle","DH, DF, BS",730,{"v":20.80429510675,"d":"20.80"},{"v":950320933.3362283,"d":"9.50E+08"}]
[null,"middle","DH, DF, BS",731,{"v":17.606539307112936,"d":"17.61"},{"v":5264167200.190096,"d":"5.26E+09"}]
[null,"middle","DH, DF, BS",732,{"v":24.0871034480175,"d":"24.09"},{"v":163801272.66771874,"d":"1.64E+08"}]
[null,"old","DH, DF, BS",733,{"v":28.561061514142597,"d":"28.56"},{"v":14944988.889739543,"d":"1.49E+07"}]
[null,"old","DH, DF, BS",734,{"v":16.959252587338334,"d":"16.96"},{"v":7447403083.806875,"d":"7.45E+09"}]
[null,"old","DH, DF, BS",735,{"v":15.562019636802399,"d":"15.56"},{"v":15733001453.10379,"d":"1.57E+10"}]
[null,"old","DH, DF, BS",736,{"v":15.587238500158035,"d":"15.59"},{"v":15528603241.63179,"d":"1.55E+10"}]
[null,"diseased","twisted in cell",737,{"v":15.472294341890432,"d":"15.47"},{"v":16540093228.25142,"d":"1.65E+10"}]
[null,"diseased","twisted in cell",738,{"v":16.1452839232099,"d":"16.15"},{"v":11510287693.97013,"d":"1.15E+10"}]
[null,"diseased","twisted in cell",739,{"v":15.5405274454357,"d":"15.54"},{"v":15914268454.740831,"d":"1.59E+10"}]
[null,"diseased","twisted in cell",740,{"v":15.488288567859932,"d":"15.49"},{"v":16399119385.487043,"d":"1.64E+10"}]
[null,"diseased","twisted in cell, odd coloration (yellowing)",741,{"v":15.813692518716266,"d":"15.81"},{"v":13785238920.527088,"d":"1.38E+10"}]
[null,"diseased","twisted in cell",742,{"v":14.909482869716399,"d":"14.91"},{"v":22333224072.20358,"d":"2.23E+10"}]
[null,"diseased","loss of definition, yellowing, spots",743,{"v":17.0143793120338,"d":"17.01"},{"v":7247143920.884329,"d":"7.25E+09"}]
[null,"diseased","oxidized, displaced, loss of definition",744,{"v":15.930217877762132,"d":"15.93"},{"v":12931160094.67905,"d":"1.29E+10"}]
[null,"diseased","yellow spot",745,{"v":16.3122466506319,"d":"16.31"},{"v":10562875524.283634,"d":"1.06E+10"}]
[null,"diseased","twisted in cell",746,{"v":15.183732758876635,"d":"15.18"},{"v":19264141034.503372,"d":"1.93E+10"}]
[null,"diseased","twisted in cell, oxidized",747,15.12,{"v":12756742628.276514,"d":"1.28E+10"}]
[null,"diseased","twisted in cell",748,15.16,{"v":12496890848.904533,"d":"1.25E+10"}]
["5. Dwight's Corner","young","HH",{"$f":"D284+1","v":892},{"v":29.959376632997863,"d":"29.96"},{"v":1081220.9531211508,"d":"1.08E+06"}]
[null,"young","HH",{"$f":"D205+1","v":893},{"v":29.81515378570693,"d":"29.82"},{"v":1157482.0733839117,"d":"1.16E+06"}]
[null,"young","HH",894,{"v":29.112472359796968,"d":"29.11"},{"v":1733094.96428315,"d":"1.73E+06"}]
[null,"young","HH",895,{"v":26.268729748693602,"d":"26.27"},{"v":6366573.978306831,"d":"6.37E+06"}]
[null,"middle","HH",896,{"v":26.434665304531695,"d":"26.43"},{"v":5884468.976758195,"d":"5.88E+06"}]
[null,"middle","HH",897,{"v":23.823237444506432,"d":"23.82"},{"v":20649510.91303,"d":"2.06E+07"}]
[null,"middle","HH",898,{"v":22.306462594445964,"d":"22.31"},{"v":42804843.21692957,"d":"4.28E+07"}]
[null,"middle","HH",899,{"v":21.673344884832233,"d":"21.67"},{"v":58038958.37230597,"d":"5.80E+07"}]
[null,"old","HH",900,{"v":23.506246749686834,"d":"23.51"},{"v":24061258.953321375,"d":"2.41E+07"}]
[null,"old","HH",901,{"v":22.128552061649135,"d":"22.13"},{"v":46636385.51015083,"d":"4.66E+07"}]
[null,"old","HH",902,{"v":21.18997069451407,"d":"21.19"},{"v":73284266.37387905,"d":"7.33E+07"}]
[null,"old","HH",903,{"v":23.365552204514866,"d":"23.37"},{"v":25772399.339914378,"d":"2.58E+07"}]
[null,"young","DH, BS",{"$f":"D216+1","v":904},{"v":21.283202229578468,"d":"21.28"},{"v":70014326.79626606,"d":"7.00E+07"}]
[null,"young","DH, BS",905,{"v":29.875388261718438,"d":"29.88"},{"v":1124860.47448337,"d":"1.12E+06"}]
[null,"young","DH, BS",906,{"v":19.455547108630867,"d":"19.46"},{"v":168641626.68727496,"d":"1.69E+08"}]
[null,"young","DH, BS",907,{"v":20.031879739573,"d":"20.03"},{"v":127863878.80444789,"d":"1.28E+08"}]
[null,"middle","DH, BS",908,{"v":22.891607761735,"d":"22.89"},{"v":32326977.278405752,"d":"3.23E+07"}]
[null,"middle","DH, BS",909,{"v":25.525057815864937,"d":"25.525"},{"v":9604818.359102843,"d":"9.60E+06"}]
[null,"middle","DH, BS",{"$f":"D222+1","v":910},{"v":27.226310348396634,"d":"27.226"},{"v":4250133.049153183,"d":"4.25E+06"}]
[null,"middle","DH, BS",911,{"v":28.681365791054635,"d":"28.68"},{"v":2003382.2999227997,"d":"2.00E+06"}]
[null,"old","DH, BS",912,{"v":18.702424502510333,"d":"18.70"},{"v":247187779.10108125,"d":"2.47E+08"}]
[null,"old","DH, BS",913,{"v":18.150565902755933,"d":"18.15"},{"v":315961821.9824404,"d":"3.16E+08"}]
[null,"old","DH, BS",914,{"v":20.275892700330164,"d":"20.28"},{"v":113662810.42399916,"d":"1.14E+08"}]
[null,"old","DH, BS",915,{"v":24.7488504539855,"d":"24.75"},{"v":13249605.690119648,"d":"1.32E+07"}]
[null,"diseased","twisting in cell",916,{"v":16.823010874829535,"d":"16.823"},{"v":606324701.3417734,"d":"6.06E+08"}]
[null,"diseased","twisting in cell, oxidized, displaced",917,{"v":14.348609802612534,"d":"14.349"},{"v":1965163869.9990873,"d":"1.97E+09"}]
[null,"diseased","twisting in cell, oxidized, displaced, spotty",918,{"v":16.540352047967534,"d":"16.540"},{"v":691633067.2152325,"d":"6.92E+08"}]
[null,"diseased","oxidized, sunken, loss of definition",919,{"v":21.383497041652834,"d":"21.383"},{"v":68786571.76072668,"d":"6.88E+07"}]
[null,"diseased","moving in cell",920]
[null,"diseased","slightly twisted",{"$f":"D233+1","v":921},{"v":14.531128395682302,"d":"14.531"},{"v":1801417610.6308835,"d":"1.80E+09"}]
[null,"diseased","slightly twisted",{"$f":"D234+1","v":922},{"v":15.256991567291266,"d":"15.257"},{"v":1274246741.914025,"d":"1.27E+09"}]
[null,"diseased","slightly twisted, yellow hue, loss of definition",{"$f":"D235+1","v":923},14.436,{"v":1884760503.6098125,"d":"1.88E+09"}]
["6. Hull ","young","HH",844,{"v":31.009603703253433,"d":"31.010"},{"v":702740.9069294721,"d":"7.03E+05"}]
[null,"young","HH",{"$f":"D237+1","v":845},{"v":30.882410367653534,"d":"30.882"},{"v":749067.1266814125,"d":"7.49E+05"}]
[null,"young","HH",846,{"v":30.868860716642132,"d":"30.869"},{"v":753548.4903092895,"d":"7.54E+05"}]
[null,"young","HH",847,31.6,{"v":4787953.49341342,"d":"4.79E+06"}]
[null,"middle","HH",848,30.31,{"v":8884177.909993624,"d":"8.88E+06"}]
[null,"middle","HH",849]
[null,"middle","HH",850,{"v":30.15,"d":"30.150"},{"v":1057124.4374461484,"d":"1.06E+06"}]
[null,"middle","HH",851,{"v":30.2968285459094,"d":"30.30"},{"v":8909868.641596131,"d":"8.91E+06"}]
[null,"old","HH",852,{"v":30.618764898672,"d":"30.62"},{"v":7643023.5113483155,"d":"7.64E+06"}]
[null,"old","HH",853,{"v":29.37334278868765,"d":"29.37"},{"v":14043965.10291471,"d":"1.40E+07"}]
[null,"old","HH",854,{"v":30.330893039334498,"d":"30.33"},{"v":9299760.711066917,"d":"9.30E+06"}]
[null,"old","HH",855,{"v":30.447647630998247,"d":"30.45"},{"v":8093486.190155259,"d":"8.09E+06"}]
[null,"young","DH, BS",856,{"v":30.53832998668235,"d":"30.54"},{"v":8078727.927284675,"d":"8.08E+06"}]
[null,"young","DH, BS",857,{"v":29.9364665195373,"d":"29.94"},{"v":10483206.3426529,"d":"1.05E+07"}]
[null,"young","DH, BS",858,{"v":30.528152693515402,"d":"30.53"},{"v":8073965.57319197,"d":"8.07E+06"}]
[null,"young","DH, BS",859,{"v":31.2451288690607,"d":"31.25"},{"v":5684026.773879541,"d":"5.68E+06"}]
[null,"middle","DH, BS",860,{"v":30.1981939142253,"d":"30.20"},{"v":9439374.577148492,"d":"9.44E+06"}]
[null,"middle","DH, BS",861,{"v":30.287358366000397,"d":"30.29"},{"v":9773797.97841585,"d":"9.77E+06"}]
[null,"middle","DH, BS",862,{"v":30.51907555681815,"d":"30.52"},{"v":7778810.313046562,"d":"7.78E+06"}]
[null,"middle","DH, BS",863,{"v":30.84366627929585,"d":"30.84"},{"v":6507015.001977646,"d":"6.51E+06"}]
[null,"old","DH, BS",864,{"v":30.326786951915402,"d":"30.33"},{"v":8876249.82247137,"d":"8.88E+06"}]
[null,"old","DH, BS",865,{"v":30.191,"d":"30.19"},{"v":1036015.7791758826,"d":"1.04E+06"}]
[null,"old","DH, BS",866,{"v":31.381057348455798,"d":"31.38"},{"v":5324683.9318588795,"d":"5.32E+06"}]
[null,"old","DH, BS",867,{"v":30.18374074522875,"d":"30.18"},{"v":10300166.824393801,"d":"1.03E+07"}]
[null,"diseased","misplaced, melted",868,{"v":31.15596509226867,"d":"31.16"},{"v":4273334.945442862,"d":"4.27E+06"}]
[null,"diseased","thin, translucent, slightly flattened",869,{"v":30.586851976127104,"d":"30.59"},{"v":5700336.688376529,"d":"5.70E+06"}]
[null,"diseased","misshapen, oxidized, flattening",870,31.15,{"v":656920.3138048415,"d":"6.57E+05"}]
[null,"diseased","oxidized, bruises",871,{"v":27.43027277026327,"d":"27.43"},{"v":27339178.2888565,"d":"2.73E+07"}]
[null,"diseased","thin, translucent, loosely curled",872,{"v":30.569421271643005,"d":"30.57"},{"v":5724676.676124162,"d":"5.72E+06"}]
[null,"diseased","translucent",873,{"v":31.20985760734733,"d":"31.21"},{"v":4164875.879450324,"d":"4.16E+06"}]
[null,"diseased","translucent, loosely curled",874,{"v":29.781449395752464,"d":"29.78"},{"v":8500784.72823145,"d":"8.50E+06"}]
[null,"diseased","oxidizing yellow",875,{"v":30.0044960383934,"d":"30.00"},{"v":7581368.839184945,"d":"7.58E+06"}]
[null,"diseased","twisting in cell",876,{"v":30.577559092066366,"d":"30.58"},{"v":5701459.46117927,"d":"5.70E+06"}]
[null,"diseased","twisting in cell",877,{"v":21.831483730357764,"d":"21.83"},{"v":444898212.1586363,"d":"4.45E+08"}]
[null,"diseased","twisting in cell, melting, misshapen",878,{"v":30.787245400610768,"d":"30.79"},{"v":5148890.227610988,"d":"5.15E+06"},{"$nulls":9}," "]
[null,"diseased","twisting in cell",879,{"v":30.505171902851533,"d":"30.51"},{"v":5908686.44824052,"d":"5.91E+06"}]
[null,"diseased","twisting in cell, melting, oxidized, dull",880]
[null,"diseased","twisting in cell, melting, oxidized, dull",881,{"v":30.7899793733867,"d":"30.79"},{"v":5134333.765627984,"d":"5.13E+06"}]
[null,"diseased","twisting in cell, melting, oxidized, dull",882,{"v":30.69446070184023,"d":"30.69"},{"v":5378585.308929137,"d":"5.38E+06"}]
[null,"diseased","twisting in cell, melting, oxidized, dull",883,{"v":30.996551660007132,"d":"31.00"},{"v":4638541.386075851,"d":"4.64E+06"}]
[null,"diseased","twisting in cell, melting,oxidized, dull, dry, scabbed",884,{"v":31.72718265883117,"d":"31.73"},{"v":3222235.6500571375,"d":"3.22E+06"}]
[null,"diseased","twisting in cell, melting, oxidized, gooey, wet, varroa mite",885,{"v":24.081672530414167,"d":"24.08"},{"v":144952388.619485,"d":"1.45E+08"}]
[null,"diseased","twisting in cell, melting, oxidized, gooey, wet",886,{"v":31.35670602745383,"d":"31.36"},{"v":3869988.0072063953,"d":"3.87E+06"}]
[null,"diseased","twisting in cell, melting, oxidized",887,{"v":20.8495843009697,"d":"20.85"},{"v":725513593.3581287,"d":"7.26E+08"}]
[null,"diseased","oxidized, bruised, sunken, deflated, wet, brown",888,{"v":31.066745333627168,"d":"31.07"},{"v":4477295.234349455,"d":"4.48E+06"}]
[null,"diseased","oxidized, sunken, deflated, wet, brown, scabbed",889,{"v":11.893482212649234,"d":"11.89"},{"v":62961912921.38026,"d":"6.30E+10"}]
[null,"diseased","oxidized, bruised, sunken, deflated, wet",890,{"v":19.706318173573468,"d":"19.71"},{"v":1286099121.5395424,"d":"1.29E+09"}]
[null,"diseased","oxidized, bruised, sunken, deflated, wet, scabbed",891,{"v":18.144170178647936,"d":"18.14"},{"v":2793328715.57723,"d":"2.79E+09"}]

{"sheet":"Table S5 Site 1-5 MANOVA","index":4,"n_rows":552,"n_cols":107,"rows_kept":552,"merged":[[7,0,7,5],[7,36,7,41],[7,72,7,77],[8,0,8,5],[8,10,8,11],[8,36,8,41],[8,46,8,47],[8,72,8,77],[8,82,8,83],[9,0,9,5],[9,36,9,41],[9,72,9,77],[10,0,10,5],[10,36,10,41],[10,72,10,77],[11,0,11,5],[11,10,11,12],[11,36,11,41],[11,46,11,48],[11,72,11,77],[11,82,11,84],[12,10,13,10],[12,11,13,11],[12,46,13,46],[12,47,13,47],[12,82,13,82],[12,83,13,83],[17,0,17,5],[17,36,17,41],[21,72,21,74],[23,0,23,2],[23,36,23,38]]}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
[]
["Table S5. MANOVA results based on the 19 top OTUs and sites 1-5 with EFB disease."]
[]
[]
[]
["MANOVA Test Criteria and F Approximations for the Hypothesis of No Overall site Effect",{"$nulls":35},"MANOVA Test Criteria and F Approximations for the Hypothesis of No Overall Age Effect",{"$nulls":35},"MANOVA Test Criteria and Exact F Statistics for the Hypothesis of No Overall Phenotype Effect"]
["H = Type III SSCP Matrix for site",{"$nulls":6},"test1",0.0045,null,"P-Value Adjustment Information",{"$nulls":3},"Melissococcus plutonius","Bacteroidetes","Ralstonia","P. apium","L. kunkeei","Enterococcus faecalis","Caulobacterales","F. perrara","Firm5","Fructobacillus","Bradyrhizobium","Clostridiales","Burkholderiales","G. apicola","Acinetobacter","Serratia","Brenneria quercina","S. alvi","Cyanobacteria","Bifido","Enterobacteriaceae",null,"H = Type III SSCP Matrix for Age",{"$nulls":6},"test1",1E-4,null,"P-Value Adjustment Information",{"$nulls":3},"Melissococcus plutonius","Bacteroidetes","Ralstonia","P. apium","L. kunkeei","Enterococcus faecalis","Caulobacterales","F. perrara","Firm5","Fructobacillus","Bradyrhizobium","Clostridiales","Burkholderiales","G. apicola","Acinetobacter","Serratia","Brenneria quercina","S. alvi","Cyanobacteria","Bifido","Enterobacteriaceae",null,"H = Type III SSCP Matrix for Phenotype",{"$nulls":6},"test1",1E-4,null,"P-Value Adjustment Information",{"$nulls":3},"Melissococcus plutonius","Bacteroidetes","Ralstonia","P. apium","L. kunkeei","Enterococcus faecalis","Caulobacterales","F. perrara","Firm5","Fructobacillus","Bradyrhizobium","Clostridiales","Burkholderiales","G. apicola","Acinetobacter","Serratia","Brenneria quercina","S. alvi","Cyanobacteria","Bifido","Enterobacteriaceae"]
["E = Error SSCP Matrix",{"$nulls":6},"test 2",0.0009,null,"P-Value Adjustment","False Discovery Rate",null,null,{"v":0.0059,"d":"0.01"},{"v":0.0013,"d":"0.001"},0.0002,0.0002,0.06,{"v":0.0005,"d":"0.001"},0.0002,0.0002,{"v":0.0012,"d":"0.001"},0.0002,0.0002,0.009,0.0002,0.0002,0.0002,{"v":0.5114,"d":"0.51"},0.0002,{"v":0.2165,"d":"0.22"},0.0002,0.0004,{"v":0.0547,"d":"0.05"},null,"E = Error SSCP Matrix",{"$nulls":6},"test 2",1E-4,null,"P-Value Adjustment","False Discovery Rate",null,null,0.0002,0.0002,0.0002,{"v":2.8E-3,"d":"0.003"},0.0002,0.0002,0.0002,{"v":0.1954,"d":"0.20"},0.0002,0.0002,0.0002,0.0002,0.0002,{"v":0.0011,"d":"0.001"},0.0002,{"v":0.3682,"d":"0.37"},{"v":0.0011,"d":"0.001"},{"v":0.0161,"d":"0.02"},{"v":0.8463,"d":"0.85"},0.0002,0.48,null,"E = Error SSCP Matrix",{"$nulls":6},"test2",1E-4,null,"P-Value Adjustment","False Discovery Rate",null,null,0.0003,0.0003,0.0003,{"v":8.6E-3,"d":"0.009"},{"v":0.9255,"d":"0.93"},{"v":0.0012,"d":"0.001"},0.0003,{"v":0.8973,"d":"0.90"},0.0003,{"v":0.0027,"d":"0.003"},0.0003,{"v":0.9398,"d":"0.94"},0.0003,{"v":0.015,"d":"0.02"},{"v":0.0017,"d":"0.002"},{"v":0.1141,"d":"0.11"},{"v":0.0046,"d":"0.005"},{"v":0.0202,"d":"0.02"},{"v":0.1141,"d":"0.11"},0.0003,{"v":0.0482,"d":"0.05"}]
[{"$nulls":7},"test 3",1E-4,{"$nulls":34},"test 3",1E-4,{"$nulls":34},"test3",1E-4,{"$nulls":5},"^",{"$nulls":4},"^",null,null,"^","^",{"$nulls":3},"^",null,null,"^","^",null,"^","^"]
["S=4 M=7.5 N=99.5",{"$nulls":6},"test4",1E-4,null,"p-Values",{"$nulls":25},"S=3 M=8 N=100",{"$nulls":6},"test4",0.0021,null,"p-Values",{"$nulls":25},"S=1 M=9 N=101",{"$nulls":6},"test4",5.3E-3,null,"p-Values"]
["Statistic","Value","F Value","Num DF","Den DF","Pr > F",null,"test5",0.0543,null,"Test","Raw","False Discovery",{"$nulls":23},"Statistic","Value","F Value","Num DF","Den DF","Pr > F",null,"test5",1E-4,null,"Test","Raw","False Discovery",{"$nulls":23},"Statistic","Value","F Value","Num DF","Den DF","Pr > F",null,"test5",0.8814,null,"Test","Raw","False Discovery"]
["Wilks' Lambda",0.00878651,23.07,80,795.34,"<.0001",null,"test6",0.0003,{"$nulls":3},"Rate",{"$nulls":23},"Wilks' Lambda",0.25876351,5.77,60,603.49,"<.0001",null,"test6",1E-4,{"$nulls":3},"Rate",{"$nulls":23},"Wilks' Lambda",0.55595216,8.15,20,204,"<.0001",null,"test6",0.0005,{"$nulls":3},"Rate"]
["Pillai's Trace",2.50868057,17.16,80,816,"<.0001",null,"test7",1E-4,null,1,0.0045,0.0059,{"$nulls":23},"Pillai's Trace",0.96035588,4.8,60,612,"<.0001",null,"test7",1E-4,null,1,1E-4,0.0002,{"$nulls":23},"Pillai's Trace",0.44404784,8.15,20,204,"<.0001",null,"test7",1E-4,null,1,1E-4,0.0003]
["Hotelling-Lawley Trace",11.41163306,28.48,80,642.88,"<.0001",null,"test8",1E-4,null,2,0.0009,0.0013,{"$nulls":23},"Hotelling-Lawley Trace",2.07391538,6.94,60,511.5,"<.0001",null,"test8",0.1675,null,2,1E-4,0.0002,{"$nulls":23},"Hotelling-Lawley Trace",0.79871592,8.15,20,204,"<.0001",null,"test8",0.8118,null,2,1E-4,0.0003]
["Roy's Greatest Root",5.4363465,55.45,20,204,"<.0001",null,"test9",0.0008,null,3,1E-4,0.0002,{"$nulls":23},"Roy's Greatest Root",1.64925089,16.82,20,204,"<.0001",null,"test9",1E-4,null,3,1E-4,0.0002,{"$nulls":23},"Roy's Greatest Root",0.79871592,8.15,20,204,"<.0001",null,"test9",1E-4,null,3,1E-4,0.0003]
["NOTE: F Statistic for Roy's Greatest Root is an upper bound.",{"$nulls":6},"test10",1E-4,null,4,1E-4,0.0002,{"$nulls":23},"NOTE: F Statistic for Roy's Greatest Root is an upper bound.",{"$nulls":6},"test10",1E-4,null,4,0.0021,2.8E-3,{"$nulls":23},"The SAS System",{"$nulls":6},"test10",1.4E-3,null,4,5.3E-3,8.6E-3]
[{"$nulls":7},"test11",1E-4,null,5,0.0543,0.06,{"$nulls":30},"test11",1E-4,null,5,1E-4,0.0002,{"$nulls":30},"test11",1E-4,null,5,0.8814,0.9255]
["The SAS System",{"$nulls":6},"test12",0.0073,null,6,0.0003,0.0005,{"$nulls":23},"The SAS System",{"$nulls":6},"test12",1E-4,null,6,1E-4,0.0002,{"$nulls":23},"The GLM Procedure",{"$nulls":6},"test12",0.9398,null,6,0.0005,0.0012]
[{"$nulls":7},"test13",1E-4,null,7,1E-4,0.0002,{"$nulls":30},"test13",1E-4,null,7,1E-4,0.0002,{"$nulls":30},"test13",1E-4,null,7,1E-4,0.0003]
["The GLM Procedure",{"$nulls":6},"test14",1E-4,null,8,1E-4,0.0002,{"$nulls":23},"The GLM Procedure",{"$nulls":6},"test14",0.0007,null,8,0.1675,0.1954,{"$nulls":23},"Class Level Information",{"$nulls":6},"test14",0.01,null,8,0.8118,0.8973]
[{"$nulls":7},"test15",1E-4,null,9,0.0008,0.0012,{"$nulls":30},"test15",1E-4,null,9,1E-4,0.0002,{"$nulls":23},"Class","Levels","Values",{"$nulls":4},"test15",0.0008,null,9,1E-4,0.0003]
["Class Level Information",{"$nulls":6},"test16",0.5114,null,10,1E-4,0.0002,{"$nulls":23},"Class Level Information",{"$nulls":6},"test16",0.3331,null,10,1E-4,0.0002,{"$nulls":23},"Phenotype",2,"Diseased Healthy",{"$nulls":4},"test16",0.0978,null,10,1.4E-3,0.0027]
["Class","Levels","Values",{"$nulls":4},"test17",1E-4,null,11,1E-4,0.0002,{"$nulls":23},"Class","Levels","Values",{"$nulls":4},"test17",0.0008,null,11,1E-4,0.0002,{"$nulls":30},"test17",0.0026,null,11,1E-4,0.0003]
["site",5,"1 2 3 4 5",{"$nulls":4},"test18",0.2062,null,12,0.0073,0.009,{"$nulls":23},"Age",4,"Unknown middle old young",{"$nulls":4},"test18",0.013,null,12,1E-4,0.0002,{"$nulls":23},"Number of Observations Read",225,{"$nulls":5},"test18",0.0144,null,12,0.9398,0.9398]
[{"$nulls":7},"test19",1E-4,null,13,1E-4,0.0002,{"$nulls":30},"test19",0.8463,null,13,1E-4,0.0002,{"$nulls":23},"Number of Observations Used",225,{"$nulls":5},"test19",0.0966,null,13,1E-4,0.0003]
["Number of Observations Read",225,{"$nulls":5},"test20",0.0002,null,14,1E-4,0.0002,{"$nulls":23},"Number of Observations Read",225,{"$nulls":5},"test20",1E-4,null,14,0.0007,0.0011,{"$nulls":30},"test20",1E-4,null,14,0.01,0.015]
["Number of Observations Used",225,{"$nulls":5},"test21",0.0469,null,15,1E-4,0.0002,{"$nulls":23},"Number of Observations Used",225,{"$nulls":5},"test21",0.4571,null,15,1E-4,0.0002,{"$nulls":30},"test21",0.0367,null,15,0.0008,0.0017]
[{"$nulls":10},16,0.5114,0.5114,{"$nulls":33},16,0.3331,0.3682,{"$nulls":33},16,0.0978,0.1141]
[{"$nulls":10},17,1E-4,0.0002,{"$nulls":33},17,0.0008,0.0011,{"$nulls":33},17,0.0026,0.0046]
[{"$nulls":10},18,0.2062,0.2165,{"$nulls":33},18,0.013,0.0161,{"$nulls":23},"The SAS System",{"$nulls":9},18,0.0144,0.0202]
[{"$nulls":10},19,1E-4,0.0002,{"$nulls":33},19,0.8463,0.8463,{"$nulls":33},19,0.0966,0.1141]
["The SAS System",{"$nulls":9},20,0.0002,0.0004,{"$nulls":23},"The SAS System",{"$nulls":9},20,1E-4,0.0002,{"$nulls":23},"The GLM Procedure",{"$nulls":9},20,1E-4,0.0003]
[{"$nulls":10},21,0.0469,0.0547,{"$nulls":33},21,0.4571,0.48,{"$nulls":33},21,0.0367,0.0482]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Melissococcus_plutonius Melissococcus plutonius"]
[]
["Dependent Variable: Melissococcus_plutonius Melissococcus plutonius",{"$nulls":35},"Dependent Variable: Melissococcus_plutonius Melissococcus plutonius",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,614.480476,614.480476,99.24,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,1380.818443,6.192011]
["Model",4,131.67658,32.919145,3.89,0.0045,{"$nulls":30},"Model",3,368.561259,122.853753,16.69,"<.0001",{"$nulls":30},"Corrected Total",224,1995.298919]
["Error",220,1863.622339,8.471011,{"$nulls":32},"Error",221,1626.737661,7.360804]
["Corrected Total",224,1995.298919,{"$nulls":33},"Corrected Total",224,1995.298919,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Melissococcus_plutonius Mean"]
[{"$nulls":72},0.307964,46.89735,2.488375,5.306004]
["R-Square","Coeff Var","Root MSE","Melissococcus_plutonius Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Melissococcus_plutonius Mean"]
[0.065993,54.85296,2.9105,5.306004,{"$nulls":32},0.184715,51.13227,2.71308,5.306004,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,614.480476,614.480476,99.24,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,131.67658,32.919145,3.89,0.0045,{"$nulls":30},"Age",3,368.5612586,122.8537529,16.69,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,614.480476,614.480476,99.24,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,131.67658,32.919145,3.89,0.0045,{"$nulls":30},"Age",3,368.5612586,122.8537529,16.69,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Bacteroidetes Bacteroidetes"]
[]
["Dependent Variable: Bacteroidetes Bacteroidetes",{"$nulls":35},"Dependent Variable: Bacteroidetes Bacteroidetes",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,223.5300641,223.5300641,82.42,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,604.8009415,2.7121118]
["Model",4,67.3621491,16.8405373,4.87,0.0009,{"$nulls":30},"Model",3,431.8125098,143.9375033,80.22,"<.0001",{"$nulls":30},"Corrected Total",224,828.3310055]
["Error",220,760.9688564,3.4589493,{"$nulls":32},"Error",221,396.5184958,1.7942013]
["Corrected Total",224,828.3310055,{"$nulls":33},"Corrected Total",224,828.3310055,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Bacteroidetes Mean"]
[{"$nulls":72},0.269856,49.58866,1.646849,3.321019]
["R-Square","Coeff Var","Root MSE","Bacteroidetes Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Bacteroidetes Mean"]
[0.081323,56.00163,1.859825,3.321019,{"$nulls":32},0.521304,40.33334,1.339478,3.321019,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,223.5300641,223.5300641,82.42,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,67.36214914,16.84053728,4.87,0.0009,{"$nulls":30},"Age",3,431.8125098,143.9375033,80.22,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,223.5300641,223.5300641,82.42,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,67.36214914,16.84053728,4.87,0.0009,{"$nulls":30},"Age",3,431.8125098,143.9375033,80.22,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Ralstonia Ralstonia"]
[]
["Dependent Variable: Ralstonia Ralstonia",{"$nulls":35},"Dependent Variable: Ralstonia Ralstonia",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,242.6472124,242.6472124,78.62,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,688.2124215,3.0861544]
["Model",4,110.6917731,27.6729433,7.42,"<.0001",{"$nulls":30},"Model",3,480.6252141,160.2084047,78.64,"<.0001",{"$nulls":30},"Corrected Total",224,930.8596339]
["Error",220,820.1678608,3.7280357,{"$nulls":32},"Error",221,450.2344198,2.0372598]
["Corrected Total",224,930.8596339,{"$nulls":33},"Corrected Total",224,930.8596339,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Ralstonia Mean"]
[{"$nulls":72},0.26067,65.78092,1.756745,2.6706]
["R-Square","Coeff Var","Root MSE","Ralstonia Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Ralstonia Mean"]
[0.118913,72.29881,1.930812,2.6706,{"$nulls":32},0.516324,53.44589,1.427326,2.6706,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,242.6472124,242.6472124,78.62,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,110.6917731,27.6729433,7.42,"<.0001",{"$nulls":30},"Age",3,480.6252141,160.2084047,78.64,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,242.6472124,242.6472124,78.62,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,110.6917731,27.6729433,7.42,"<.0001",{"$nulls":30},"Age",3,480.6252141,160.2084047,78.64,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: P__apium P# apium"]
[]
["Dependent Variable: P__apium P# apium",{"$nulls":35},"Dependent Variable: P__apium P# apium",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,62.982415,62.982415,7.94,5.3E-3]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,1768.520719,7.930586]
["Model",4,680.396553,170.099138,32.51,"<.0001",{"$nulls":30},"Model",3,117.270019,39.090006,5.04,0.0021,{"$nulls":30},"Corrected Total",224,1831.503134]
["Error",220,1151.10658,5.232303,{"$nulls":32},"Error",221,1714.233114,7.756711]
["Corrected Total",224,1831.503134,{"$nulls":33},"Corrected Total",224,1831.503134,{"$nulls":33},"R-Square","Coeff Var","Root MSE","P__apium Mean"]
[{"$nulls":72},0.034388,94.15321,2.81613,2.991008]
["R-Square","Coeff Var","Root MSE","P__apium Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","P__apium Mean"]
[0.371496,76.47666,2.287423,2.991008,{"$nulls":32},0.064029,93.11535,2.785087,2.991008,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,62.98241489,62.98241489,7.94,5.3E-3]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,680.3965532,170.0991383,32.51,"<.0001",{"$nulls":30},"Age",3,117.2700195,39.0900065,5.04,0.0021,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,62.98241489,62.98241489,7.94,5.3E-3]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,680.3965532,170.0991383,32.51,"<.0001",{"$nulls":30},"Age",3,117.2700195,39.0900065,5.04,0.0021]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: L__kunkeei L# kunkeei"]
[]
["Dependent Variable: L__kunkeei L# kunkeei",{"$nulls":35},"Dependent Variable: L__kunkeei L# kunkeei",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,0.138052,0.138052,0.02,0.8814]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,1381.025927,6.192941]
["Model",4,56.838654,14.209663,2.36,0.0543,{"$nulls":30},"Model",3,121.81008,40.60336,7.13,1E-4,{"$nulls":30},"Corrected Total",224,1381.16398]
["Error",220,1324.325326,6.019661,{"$nulls":32},"Error",221,1259.353899,5.698434]
["Corrected Total",224,1381.16398,{"$nulls":33},"Corrected Total",224,1381.16398,{"$nulls":33},"R-Square","Coeff Var","Root MSE","L__kunkeei Mean"]
[{"$nulls":72},1E-4,81.72981,2.488562,3.044865]
["R-Square","Coeff Var","Root MSE","L__kunkeei Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","L__kunkeei Mean"]
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["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
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["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
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[]
[]
[]
[]
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[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Enterococcus_faecalis Enterococcus faecalis"]
[]
["Dependent Variable: Enterococcus_faecalis Enterococcus faecalis",{"$nulls":35},"Dependent Variable: Enterococcus_faecalis Enterococcus faecalis",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,75.738778,75.738778,12.58,0.0005]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,1342.824529,6.021635]
["Model",4,129.629881,32.40747,5.53,0.0003,{"$nulls":30},"Model",3,221.018964,73.672988,13.6,"<.0001",{"$nulls":30},"Corrected Total",224,1418.563308]
["Error",220,1288.933427,5.858788,{"$nulls":32},"Error",221,1197.544344,5.418753]
["Corrected Total",224,1418.563308,{"$nulls":33},"Corrected Total",224,1418.563308,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Enterococcus_faecalis Mean"]
[{"$nulls":72},0.053391,1480.232,2.453902,0.165778]
["R-Square","Coeff Var","Root MSE","Enterococcus_faecalis Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Enterococcus_faecalis Mean"]
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[{"$nulls":72},"Phenotype",1,75.7387784,75.7387784,12.58,0.0005]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,129.6298809,32.4074702,5.53,0.0003,{"$nulls":30},"Age",3,221.0189637,73.6729879,13.6,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,75.7387784,75.7387784,12.58,0.0005]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,129.6298809,32.4074702,5.53,0.0003,{"$nulls":30},"Age",3,221.0189637,73.6729879,13.6,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Caulobacterales Caulobacterales"]
[]
["Dependent Variable: Caulobacterales Caulobacterales",{"$nulls":35},"Dependent Variable: Caulobacterales Caulobacterales",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,221.3568333,221.3568333,74.1,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,666.1892647,2.9873958]
["Model",4,87.4510296,21.8627574,6.01,1E-4,{"$nulls":30},"Model",3,436.7194444,145.5731481,71.36,"<.0001",{"$nulls":30},"Corrected Total",224,887.5460979]
["Error",220,800.0950684,3.6367958,{"$nulls":32},"Error",221,450.8266535,2.0399396]
["Corrected Total",224,887.5460979,{"$nulls":33},"Corrected Total",224,887.5460979,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Caulobacterales Mean"]
[{"$nulls":72},0.249403,129.1733,1.728408,1.338054]
["R-Square","Coeff Var","Root MSE","Caulobacterales Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Caulobacterales Mean"]
[0.098531,142.5233,1.907038,1.338054,{"$nulls":32},0.492053,106.7419,1.428265,1.338054,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,221.3568333,221.3568333,74.1,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,87.45102957,21.86275739,6.01,1E-4,{"$nulls":30},"Age",3,436.7194444,145.5731481,71.36,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,221.3568333,221.3568333,74.1,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,87.45102957,21.86275739,6.01,1E-4,{"$nulls":30},"Age",3,436.7194444,145.5731481,71.36,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
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["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: F__perrara F# perrara"]
[]
["Dependent Variable: F__perrara F# perrara",{"$nulls":35},"Dependent Variable: F__perrara F# perrara",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,0.2542558,0.2542558,0.06,0.8118]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,997.4707852,4.4729632]
["Model",4,132.4415663,33.1103916,8.42,"<.0001",{"$nulls":30},"Model",3,22.5320151,7.5106717,1.7,0.1675,{"$nulls":30},"Corrected Total",224,997.725041]
["Error",220,865.2834747,3.9331067,{"$nulls":32},"Error",221,975.1930259,4.4126381]
["Corrected Total",224,997.725041,{"$nulls":33},"Corrected Total",224,997.725041,{"$nulls":33},"R-Square","Coeff Var","Root MSE","F__perrara Mean"]
[{"$nulls":72},0.000255,-173.0237,2.114938,-1.22234]
["R-Square","Coeff Var","Root MSE","F__perrara Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","F__perrara Mean"]
[0.132744,-162.2467,1.983206,-1.22234,{"$nulls":32},0.022583,-171.853,2.100628,-1.22234,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,0.25425582,0.25425582,0.06,0.8118]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,132.4415663,33.1103916,8.42,"<.0001",{"$nulls":30},"Age",3,22.53201508,7.51067169,1.7,0.1675,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,0.25425582,0.25425582,0.06,0.8118]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,132.4415663,33.1103916,8.42,"<.0001",{"$nulls":30},"Age",3,22.53201508,7.51067169,1.7,0.1675]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
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["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Firm5 Firm5"]
[]
["Dependent Variable: Firm5 Firm5",{"$nulls":35},"Dependent Variable: Firm5 Firm5",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,144.002275,144.002275,22.02,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,1458.623586,6.540913]
["Model",4,131.926766,32.981691,4.93,0.0008,{"$nulls":30},"Model",3,332.882078,110.960693,19.31,"<.0001",{"$nulls":30},"Corrected Total",224,1602.62586]
["Error",220,1470.699095,6.684996,{"$nulls":32},"Error",221,1269.743783,5.745447]
["Corrected Total",224,1602.62586,{"$nulls":33},"Corrected Total",224,1602.62586,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Firm5 Mean"]
[{"$nulls":72},0.089854,-662.8477,2.557521,-0.385838]
["R-Square","Coeff Var","Root MSE","Firm5 Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Firm5 Mean"]
[0.082319,-670.1085,2.585536,-0.385838,{"$nulls":32},0.20771,-621.2358,2.396966,-0.385838,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,144.0022746,144.0022746,22.02,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,131.9267656,32.9816914,4.93,0.0008,{"$nulls":30},"Age",3,332.8820777,110.9606926,19.31,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,144.0022746,144.0022746,22.02,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,131.9267656,32.9816914,4.93,0.0008,{"$nulls":30},"Age",3,332.8820777,110.9606926,19.31,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Fructobacillus Fructobacillus"]
[]
["Dependent Variable: Fructobacillus Fructobacillus",{"$nulls":35},"Dependent Variable: Fructobacillus Fructobacillus",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,89.384114,89.384114,10.52,1.4E-3]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,1893.950143,8.49305]
["Model",4,647.751463,161.937866,26.67,"<.0001",{"$nulls":30},"Model",3,334.181565,111.393855,14.93,"<.0001",{"$nulls":30},"Corrected Total",224,1983.334258]
["Error",220,1335.582795,6.070831,{"$nulls":32},"Error",221,1649.152693,7.462229]
["Corrected Total",224,1983.334258,{"$nulls":33},"Corrected Total",224,1983.334258,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Fructobacillus Mean"]
[{"$nulls":72},0.045068,950.2777,2.914284,0.306677]
["R-Square","Coeff Var","Root MSE","Fructobacillus Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Fructobacillus Mean"]
[0.326597,803.4202,2.463906,0.306677,{"$nulls":32},0.168495,890.7442,2.731708,0.306677,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,89.38411447,89.38411447,10.52,1.4E-3]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,647.7514628,161.9378657,26.67,"<.0001",{"$nulls":30},"Age",3,334.1815647,111.3938549,14.93,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,89.38411447,89.38411447,10.52,1.4E-3]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,647.7514628,161.9378657,26.67,"<.0001",{"$nulls":30},"Age",3,334.1815647,111.3938549,14.93,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Bradyrhizobium Bradyrhizobium"]
[]
["Dependent Variable: Bradyrhizobium Bradyrhizobium",{"$nulls":35},"Dependent Variable: Bradyrhizobium Bradyrhizobium",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,157.2538892,157.2538892,54.42,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,644.3672349,2.8895392]
["Model",4,111.2746771,27.8186693,8.87,"<.0001",{"$nulls":30},"Model",3,337.5990961,112.533032,53.6,"<.0001",{"$nulls":30},"Corrected Total",224,801.6211241]
["Error",220,690.346447,3.1379384,{"$nulls":32},"Error",221,464.022028,2.0996472]
["Corrected Total",224,801.6211241,{"$nulls":33},"Corrected Total",224,801.6211241,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Bradyrhizobium Mean"]
[{"$nulls":72},0.19617,311.3139,1.699864,0.546029]
["R-Square","Coeff Var","Root MSE","Bradyrhizobium Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Bradyrhizobium Mean"]
[0.138812,324.4191,1.771423,0.546029,{"$nulls":32},0.421145,265.3734,1.449016,0.546029,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,157.2538892,157.2538892,54.42,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,111.2746771,27.8186693,8.87,"<.0001",{"$nulls":30},"Age",3,337.5990961,112.533032,53.6,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,157.2538892,157.2538892,54.42,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,111.2746771,27.8186693,8.87,"<.0001",{"$nulls":30},"Age",3,337.5990961,112.533032,53.6,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Clostridiales Clostridiales"]
[]
["Dependent Variable: Clostridiales Clostridiales",{"$nulls":35},"Dependent Variable: Clostridiales Clostridiales",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,0.0242536,0.0242536,0.01,0.9398]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,947.6875721,4.2497201]
["Model",4,58.1358214,14.5339554,3.59,0.0073,{"$nulls":30},"Model",3,115.0947235,38.3649078,10.18,"<.0001",{"$nulls":30},"Corrected Total",224,947.7118257]
["Error",220,889.5760043,4.0435273,{"$nulls":32},"Error",221,832.6171022,3.7674982]
["Corrected Total",224,947.7118257,{"$nulls":33},"Corrected Total",224,947.7118257,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Clostridiales Mean"]
[{"$nulls":72},2.6e-05,-115.731,2.061485,-1.781273]
["R-Square","Coeff Var","Root MSE","Clostridiales Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Clostridiales Mean"]
[0.061343,-112.8885,2.010852,-1.781273,{"$nulls":32},0.121445,-108.9672,1.941004,-1.781273,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,0.02425361,0.02425361,0.01,0.9398]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,58.13582141,14.53395535,3.59,0.0073,{"$nulls":30},"Age",3,115.0947235,38.3649078,10.18,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,0.02425361,0.02425361,0.01,0.9398]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,58.13582141,14.53395535,3.59,0.0073,{"$nulls":30},"Age",3,115.0947235,38.3649078,10.18,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Burkholderiales Burkholderiales"]
[]
["Dependent Variable: Burkholderiales Burkholderiales",{"$nulls":35},"Dependent Variable: Burkholderiales Burkholderiales",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,136.4932395,136.4932395,43.1,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,706.261446,3.1670917]
["Model",4,259.6800215,64.9200054,24.49,"<.0001",{"$nulls":30},"Model",3,268.8568483,89.6189494,34.51,"<.0001",{"$nulls":30},"Corrected Total",224,842.7546855]
["Error",220,583.0746641,2.6503394,{"$nulls":32},"Error",221,573.8978372,2.5968228]
["Corrected Total",224,842.7546855,{"$nulls":33},"Corrected Total",224,842.7546855,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Burkholderiales Mean"]
[{"$nulls":72},0.161961,1310.038,1.779632,0.135846]
["R-Square","Coeff Var","Root MSE","Burkholderiales Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Burkholderiales Mean"]
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[{"$nulls":72},"Phenotype",1,136.4932395,136.4932395,43.1,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,259.6800215,64.9200054,24.49,"<.0001",{"$nulls":30},"Age",3,268.8568483,89.6189494,34.51,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,136.4932395,136.4932395,43.1,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
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[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
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["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: G__apicola G# apicola"]
[]
["Dependent Variable: G__apicola G# apicola",{"$nulls":35},"Dependent Variable: G__apicola G# apicola",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,30.960942,30.960942,6.76,0.01]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,1022.011879,4.583013]
["Model",4,150.155274,37.538819,9.15,"<.0001",{"$nulls":30},"Model",3,77.619806,25.873269,5.86,0.0007,{"$nulls":30},"Corrected Total",224,1052.972821]
["Error",220,902.817547,4.103716,{"$nulls":32},"Error",221,975.353015,4.413362]
["Corrected Total",224,1052.972821,{"$nulls":33},"Corrected Total",224,1052.972821,{"$nulls":33},"R-Square","Coeff Var","Root MSE","G__apicola Mean"]
[{"$nulls":72},0.029403,-151.2904,2.140797,-1.415025]
["R-Square","Coeff Var","Root MSE","G__apicola Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","G__apicola Mean"]
[0.142601,-143.1609,2.025763,-1.415025,{"$nulls":32},0.073715,-148.4638,2.1008,-1.415025,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,30.96094169,30.96094169,6.76,0.01]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,150.155274,37.5388185,9.15,"<.0001",{"$nulls":30},"Age",3,77.61980591,25.87326864,5.86,0.0007,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,30.96094169,30.96094169,6.76,0.01]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,150.155274,37.5388185,9.15,"<.0001",{"$nulls":30},"Age",3,77.61980591,25.87326864,5.86,0.0007]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Acinetobacter Acinetobacter"]
[]
["Dependent Variable: Acinetobacter Acinetobacter",{"$nulls":35},"Dependent Variable: Acinetobacter Acinetobacter",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,32.0495783,32.0495783,11.6,0.0008]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,616.2331096,2.7633772]
["Model",4,229.0664507,57.2666127,30.05,"<.0001",{"$nulls":30},"Model",3,138.2053504,46.0684501,19.96,"<.0001",{"$nulls":30},"Corrected Total",224,648.2826879]
["Error",220,419.2162372,1.9055284,{"$nulls":32},"Error",221,510.0773376,2.3080423]
["Corrected Total",224,648.2826879,{"$nulls":33},"Corrected Total",224,648.2826879,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Acinetobacter Mean"]
[{"$nulls":72},0.049438,-121.4973,1.662341,-1.368212]
["R-Square","Coeff Var","Root MSE","Acinetobacter Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Acinetobacter Mean"]
[0.353343,-100.8914,1.380409,-1.368212,{"$nulls":32},0.213187,-111.0372,1.519224,-1.368212,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,32.04957835,32.04957835,11.6,0.0008]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,229.0664507,57.2666127,30.05,"<.0001",{"$nulls":30},"Age",3,138.2053504,46.0684501,19.96,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,32.04957835,32.04957835,11.6,0.0008]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,229.0664507,57.2666127,30.05,"<.0001",{"$nulls":30},"Age",3,138.2053504,46.0684501,19.96,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Serratia Serratia"]
[]
["Dependent Variable: Serratia Serratia",{"$nulls":35},"Dependent Variable: Serratia Serratia",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,1.647559,1.647559,2.76,0.0978]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,132.9135369,0.5960248]
["Model",4,1.9849088,0.4962272,0.82,0.5114,{"$nulls":30},"Model",3,2.0535333,0.6845111,1.14,0.3331,{"$nulls":30},"Corrected Total",224,134.5610959]
["Error",220,132.5761871,0.602619,{"$nulls":32},"Error",221,132.5075626,0.5995817]
["Corrected Total",224,134.5610959,{"$nulls":33},"Corrected Total",224,134.5610959,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Serratia Mean"]
[{"$nulls":72},0.012244,-29.51177,0.772026,-2.615995]
["R-Square","Coeff Var","Root MSE","Serratia Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Serratia Mean"]
[0.014751,-29.67457,0.776285,-2.615995,{"$nulls":32},0.015261,-29.5997,0.774327,-2.615995,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,1.64755901,1.64755901,2.76,0.0978]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,1.98490882,0.4962272,0.82,0.5114,{"$nulls":30},"Age",3,2.05353329,0.6845111,1.14,0.3331,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,1.64755901,1.64755901,2.76,0.0978]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,1.98490882,0.4962272,0.82,0.5114,{"$nulls":30},"Age",3,2.05353329,0.6845111,1.14,0.3331]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Brenneria_quercina Brenneria quercina"]
[]
["Dependent Variable: Brenneria_quercina Brenneria quercina",{"$nulls":35},"Dependent Variable: Brenneria_quercina Brenneria quercina",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,26.4954875,26.4954875,9.29,0.0026]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,636.0496456,2.8522406]
["Model",4,99.685905,24.9214763,9.74,"<.0001",{"$nulls":30},"Model",3,48.2356484,16.0785495,5.78,0.0008,{"$nulls":30},"Corrected Total",224,662.5451331]
["Error",220,562.8592281,2.558451,{"$nulls":32},"Error",221,614.3094847,2.7796809]
["Corrected Total",224,662.5451331,{"$nulls":33},"Corrected Total",224,662.5451331,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Brenneria_quercina Mean"]
[{"$nulls":72},0.03999,-79.41736,1.688858,-2.12656]
["R-Square","Coeff Var","Root MSE","Brenneria_quercina Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Brenneria_quercina Mean"]
[0.150459,-75.21612,1.599516,-2.12656,{"$nulls":32},0.072804,-78.40068,1.667238,-2.12656,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,26.49548754,26.49548754,9.29,0.0026]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,99.68590503,24.92147626,9.74,"<.0001",{"$nulls":30},"Age",3,48.23564844,16.07854948,5.78,0.0008,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,26.49548754,26.49548754,9.29,0.0026]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,99.68590503,24.92147626,9.74,"<.0001",{"$nulls":30},"Age",3,48.23564844,16.07854948,5.78,0.0008]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: S__alvi S# alvi"]
[]
["Dependent Variable: S__alvi S# alvi",{"$nulls":35},"Dependent Variable: S__alvi S# alvi",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,6.8605248,6.8605248,6.08,0.0144]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,251.7333623,1.1288492]
["Model",4,6.8201068,1.7050267,1.49,0.2062,{"$nulls":30},"Model",3,12.2705908,4.0901969,3.67,0.013,{"$nulls":30},"Corrected Total",224,258.5938871]
["Error",220,251.7737803,1.1444263,{"$nulls":32},"Error",221,246.3232963,1.1145851]
["Corrected Total",224,258.5938871,{"$nulls":33},"Corrected Total",224,258.5938871,{"$nulls":33},"R-Square","Coeff Var","Root MSE","S__alvi Mean"]
[{"$nulls":72},0.02653,-42.39246,1.062473,-2.506279]
["R-Square","Coeff Var","Root MSE","S__alvi Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","S__alvi Mean"]
[0.026374,-42.68395,1.069779,-2.506279,{"$nulls":32},0.047451,-42.12377,1.055739,-2.506279,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,6.86052477,6.86052477,6.08,0.0144]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,6.8201068,1.7050267,1.49,0.2062,{"$nulls":30},"Age",3,12.27059075,4.09019692,3.67,0.013,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,6.86052477,6.86052477,6.08,0.0144]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,6.8201068,1.7050267,1.49,0.2062,{"$nulls":30},"Age",3,12.27059075,4.09019692,3.67,0.013]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Cyanobacteria Cyanobacteria"]
[]
["Dependent Variable: Cyanobacteria Cyanobacteria",{"$nulls":35},"Dependent Variable: Cyanobacteria Cyanobacteria",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,5.9421352,5.9421352,2.78,0.0966]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,475.833048,2.1337805]
["Model",4,358.6006004,89.6501501,160.12,"<.0001",{"$nulls":30},"Model",3,1.7654436,0.5884812,0.27,0.8463,{"$nulls":30},"Corrected Total",224,481.7751832]
["Error",220,123.1745828,0.5598845,{"$nulls":32},"Error",221,480.0097395,2.1719898]
["Corrected Total",224,481.7751832,{"$nulls":33},"Corrected Total",224,481.7751832,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Cyanobacteria Mean"]
[{"$nulls":72},0.012334,-66.47841,1.460747,-2.197325]
["R-Square","Coeff Var","Root MSE","Cyanobacteria Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Cyanobacteria Mean"]
[0.744332,-34.05297,0.748254,-2.197325,{"$nulls":32},0.003664,-67.07098,1.473767,-2.197325,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,5.94213521,5.94213521,2.78,0.0966]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,358.6006004,89.6501501,160.12,"<.0001",{"$nulls":30},"Age",3,1.76544364,0.58848121,0.27,0.8463,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,5.94213521,5.94213521,2.78,0.0966]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,358.6006004,89.6501501,160.12,"<.0001",{"$nulls":30},"Age",3,1.76544364,0.58848121,0.27,0.8463]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Bifido Bifido"]
[]
["Dependent Variable: Bifido Bifido",{"$nulls":35},"Dependent Variable: Bifido Bifido",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,82.929319,82.929319,20.25,"<.0001"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,913.3700052,4.0958296]
["Model",4,96.3503861,24.0875965,5.89,0.0002,{"$nulls":30},"Model",3,170.4921719,56.830724,15.21,"<.0001",{"$nulls":30},"Corrected Total",224,996.2993242]
["Error",220,899.948938,4.090677,{"$nulls":32},"Error",221,825.8071523,3.7366839]
["Corrected Total",224,996.2993242,{"$nulls":33},"Corrected Total",224,996.2993242,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Bifido Mean"]
[{"$nulls":72},0.083237,-121.9297,2.023816,-1.659822]
["R-Square","Coeff Var","Root MSE","Bifido Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Bifido Mean"]
[0.096708,-121.8529,2.022542,-1.659822,{"$nulls":32},0.171125,-116.4613,1.93305,-1.659822,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,82.92931899,82.92931899,20.25,"<.0001"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,96.35038615,24.08759654,5.89,0.0002,{"$nulls":30},"Age",3,170.4921719,56.830724,15.21,"<.0001",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,82.92931899,82.92931899,20.25,"<.0001"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,96.35038615,24.08759654,5.89,0.0002,{"$nulls":30},"Age",3,170.4921719,56.830724,15.21,"<.0001"]
[]
[]
[]
[]
[{"$nulls":72},"The SAS System"]
[]
["The SAS System",{"$nulls":35},"The SAS System",{"$nulls":35},"The GLM Procedure"]
[]
["The GLM Procedure",{"$nulls":35},"The GLM Procedure",{"$nulls":35},"Dependent Variable: Enterobacteriaceae Enterobacteriaceae"]
[]
["Dependent Variable: Enterobacteriaceae Enterobacteriaceae",{"$nulls":35},"Dependent Variable: Enterobacteriaceae Enterobacteriaceae",{"$nulls":35},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Model",1,3.3621225,3.3621225,4.42,0.0367]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Error",223,169.797244,0.7614226]
["Model",4,7.3923248,1.8480812,2.45,0.0469,{"$nulls":30},"Model",3,2.0223211,0.674107,0.87,0.4571,{"$nulls":30},"Corrected Total",224,173.1593665]
["Error",220,165.7670417,0.7534866,{"$nulls":32},"Error",221,171.1370454,0.7743758]
["Corrected Total",224,173.1593665,{"$nulls":33},"Corrected Total",224,173.1593665,{"$nulls":33},"R-Square","Coeff Var","Root MSE","Enterobacteriaceae Mean"]
[{"$nulls":72},0.019416,-34.2569,0.872595,-2.54721]
["R-Square","Coeff Var","Root MSE","Enterobacteriaceae Mean",{"$nulls":32},"R-Square","Coeff Var","Root MSE","Enterobacteriaceae Mean"]
[0.042691,-34.07791,0.868036,-2.54721,{"$nulls":32},0.011679,-34.54706,0.879986,-2.54721,{"$nulls":32},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,3.36212246,3.36212246,4.42,0.0367]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["site",4,7.39232478,1.8480812,2.45,0.0469,{"$nulls":30},"Age",3,2.02232112,0.67410704,0.87,0.4571,{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
[{"$nulls":72},"Phenotype",1,3.36212246,3.36212246,4.42,0.0367]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["site",4,7.39232478,1.8480812,2.45,0.0469,{"$nulls":30},"Age",3,2.02232112,0.67410704,0.87,0.4571]

{"sheet":"Table S6 Site 6 MANOVA","index":5,"n_rows":550,"n_cols":71,"rows_kept":550,"merged":[[5,0,5,5],[5,36,5,41],[7,0,7,5],[7,10,7,11],[7,36,7,41],[7,46,7,47],[8,0,8,5],[8,36,8,41],[9,0,9,5],[9,36,9,41],[10,0,10,5],[10,10,10,12],[10,36,10,41],[10,46,10,48],[11,10,12,10],[11,11,12,11],[11,46,12,46],[11,47,12,47],[16,0,16,5],[20,36,20,38],[21,0,21,2]]}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
[]
["Table S6. MANOVA results based on the 19 top OTUs and site 6 with IBDS."]
[]
["MANOVA Test Criteria and F Approximations for the Hypothesis of No Overall Age Effect",{"$nulls":35},"MANOVA Test Criteria and Exact F Statistics for the Hypothesis of No Overall Phenotype Effect"]
[]
["H = Type III SSCP Matrix for Age",{"$nulls":6},"test1",0.2555,null,"P-Value Adjustment Information",{"$nulls":3},"Melissococcus plutonius","Bacteroidetes","Ralstonia","P. apium","L. kunkeei","Enterococcus faecalis","Caulobacterales","F. perrara","Firm5","Fructobacillus","Bradyrhizobium","Clostridiales","Burkholderiales","G. apicola","Acinetobacter","Serratia","Brenneria quercina","S. alvi","Cyanobacteria","Bifido","Enterobacteriaceae",null,"H = Type III SSCP Matrix for Phenotype",{"$nulls":6},"test1",0.1,null,"P-Value Adjustment Information",{"$nulls":3},"Melissococcus plutonius","Bacteroidetes","Ralstonia","P. apium","L. kunkeei","Enterococcus faecalis","Caulobacterales","F. perrara","Firm5","Fructobacillus","Bradyrhizobium","Clostridiales","Burkholderiales","G. apicola","Acinetobacter","Serratia","Brenneria quercina","S. alvi","Cyanobacteria","Bifido","Enterobacteriaceae"]
["E = Error SSCP Matrix",{"$nulls":6},"test2",0.0094,null,"P-Value Adjustment","False Discovery Rate",null,null,{"v":0.2824,"d":"0.28"},{"v":0.0219,"d":"0.02"},{"v":0.0258,"d":"0.03"},{"v":0.0007,"d":"0.001"},{"v":0.0067,"d":"0.01"},{"v":0.0011,"d":"0.001"},{"v":0.022,"d":"0.02"},{"v":0.0147,"d":"0.01"},{"v":0.1232,"d":"0.12"},{"v":0.4499,"d":"0.45"},{"v":0.022,"d":"0.02"},{"v":0.0258,"d":"0.03"},{"v":0.0258,"d":"0.03"},{"v":3.8E-3,"d":"0.004"},{"v":0.6157,"d":"0.62"},{"v":0.0007,"d":"0.001"},{"v":0.1437,"d":"0.14"},{"v":0.0007,"d":"0.001"},{"v":0.0173,"d":"0.02"},{"v":0.1437,"d":"0.14"},{"v":0.0258,"d":"0.03"},null,"E = Error SSCP Matrix",{"$nulls":6},"test2",0.0016,null,"P-Value Adjustment","False Discovery Rate",null,null,{"v":0.127,"d":"0.13"},{"v":0.0042,"d":"0.004"},{"v":6.3E-3,"d":"0.006"},{"v":0.0005,"d":"0.001"},{"v":0.127,"d":"0.13"},{"v":0.0351,"d":"0.04"},{"v":0.0042,"d":"0.004"},{"v":0.0013,"d":"0.001"},{"v":0.0351,"d":"0.04"},{"v":0.179,"d":"0.18"},{"v":0.0051,"d":"0.01"},{"v":0.0351,"d":"0.04"},{"v":0.0067,"d":"0.01"},{"v":0.0005,"d":"0.001"},{"v":0.5366,"d":"0.54"},{"v":0.0005,"d":"0.001"},{"v":0.8878,"d":"0.89"},{"v":0.0005,"d":"0.001"},{"v":0.0025,"d":"0.003"},{"v":0.0559,"d":"0.06"},{"v":0.8878,"d":"0.89"}]
[{"$nulls":7},"test3",0.0184,{"$nulls":34},"test3",0.003]
["S=3 M=8 N=11.5",{"$nulls":6},"test4",1E-4,null,"p-Values",{"$nulls":25},"S=1 M=9 N=12.5",{"$nulls":6},"test4",1E-4,null,"p-Values"]
["Statistic","Value","F Value","Num DF","Den DF","Pr > F",null,"test5",1.9E-3,null,"Test","Raw","False Discovery",{"$nulls":23},"Statistic","Value","F Value","Num DF","Den DF","Pr > F",null,"test5",0.1028,null,"Test","Raw","False Discovery"]
["Wilks' Lambda",0.00789438,5.11,60,75.421,"<.0001",null,"test6",0.0002,{"$nulls":3},"Rate",{"$nulls":23},"Wilks' Lambda",0.03814153,34.04,20,27,"<.0001",null,"test6",0.0234,{"$nulls":3},"Rate"]
["Pillai's Trace",1.95753596,2.54,60,81,"<.0001",null,"test7",0.0107,null,1,0.2555,0.2824,{"$nulls":23},"Pillai's Trace",0.96185847,34.04,20,27,"<.0001",null,"test7",1.4E-3,null,1,0.1,0.127]
["Hotelling-Lawley Trace",32.49759781,12.93,60,54.893,"<.0001",null,"test8",0.0049,null,2,0.0094,0.0219,{"$nulls":23},"Hotelling-Lawley Trace",25.21813728,34.04,20,27,"<.0001",null,"test8",0.0003,null,2,0.0016,0.0042]
["Roy's Greatest Root",30.42358032,41.07,20,27,"<.0001",null,"test9",0.0939,null,3,0.0184,0.0258,{"$nulls":23},"Roy's Greatest Root",25.21813728,34.04,20,27,"<.0001",null,"test9",0.0233,null,3,0.003,6.3E-3]
["NOTE: F Statistic for Roy's Greatest Root is an upper bound.",{"$nulls":6},"test10",0.4285,null,4,1E-4,0.0007,{"$nulls":23},"The SAS System",{"$nulls":6},"test10",0.1534,null,4,1E-4,0.0005]
["The SAS System",{"$nulls":6},"test11",0.0115,null,5,1.9E-3,0.0067,{"$nulls":30},"test11",0.0022,null,5,0.1028,0.127]
[{"$nulls":7},"test12",0.0179,null,6,0.0002,0.0011,{"$nulls":23},"The GLM Procedure",{"$nulls":6},"test12",0.0223,null,6,0.0234,0.0351]
["The GLM Procedure",{"$nulls":6},"test13",0.0164,null,7,0.0107,0.022,{"$nulls":30},"test13",0.0035,null,7,1.4E-3,0.0042]
[{"$nulls":7},"test14",0.0009,null,8,0.0049,0.0147,{"$nulls":23},"Class Level Information",{"$nulls":6},"test14",1E-4,null,8,0.0003,0.0013]
["Class Level Information",{"$nulls":6},"test15",0.6157,null,9,0.0939,0.1232,{"$nulls":23},"Class","Levels","Values",{"$nulls":4},"test15",0.4855,null,9,0.0233,0.0351]
["Class","Levels","Values",{"$nulls":4},"test16",1E-4,null,10,0.4285,0.4499,{"$nulls":23},"Phenotype",2,"Diseased Healthy",{"$nulls":4},"test16",1E-4,null,10,0.1534,0.179]
["Age",4,"Unknown middle old young",{"$nulls":4},"test17",0.119,null,11,0.0115,0.022,{"$nulls":30},"test17",0.8878,null,11,0.0022,0.0051]
[{"$nulls":7},"test18",1E-4,null,12,0.0179,0.0258,{"$nulls":23},"Number of Observations Read",48,{"$nulls":5},"test18",1E-4,null,12,0.0223,0.0351]
["Number of Observations Read",48,{"$nulls":5},"test19",6.6E-3,null,13,0.0164,0.0258,{"$nulls":23},"Number of Observations Used",48,{"$nulls":5},"test19",0.0007,null,13,0.0035,0.0067]
["Number of Observations Used",48,{"$nulls":5},"test20",0.1232,null,14,0.0009,3.8E-3,{"$nulls":30},"test20",0.0399,null,14,1E-4,0.0005]
[{"$nulls":7},"test21",0.0163,null,15,0.6157,0.6157,{"$nulls":30},"test21",0.8563,null,15,0.4855,0.5366]
[{"$nulls":10},16,1E-4,0.0007,{"$nulls":33},16,1E-4,0.0005]
[{"$nulls":10},17,0.119,0.1437,{"$nulls":33},17,0.8878,0.8878]
[{"$nulls":10},18,1E-4,0.0007,{"$nulls":23},"The SAS System",{"$nulls":9},18,1E-4,0.0005]
["The SAS System",{"$nulls":9},19,6.6E-3,0.0173,{"$nulls":33},19,0.0007,0.0025]
[{"$nulls":10},20,0.1232,0.1437,{"$nulls":23},"The GLM Procedure",{"$nulls":9},20,0.0399,0.0559]
["The GLM Procedure",{"$nulls":9},21,0.0163,0.0258,{"$nulls":33},21,0.8563,0.8878]
[{"$nulls":36},"Dependent Variable: Melissococcus_plutonius Melissococcus plutonius"]
["Dependent Variable: Melissococcus_plutonius Melissococcus plutonius"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,12.8307857,12.8307857,2.82,0.1]
["Model",3,19.3680435,6.4560145,1.4,0.2555,{"$nulls":30},"Error",46,209.4791141,4.5538938]
["Error",44,202.9418562,4.6123149,{"$nulls":32},"Corrected Total",47,222.3098998]
["Corrected Total",47,222.3098998]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Melissococcus_plutonius Mean"]
["R-Square","Coeff Var","Root MSE","Melissococcus_plutonius Mean",{"$nulls":32},0.057716,-482.0209,2.133985,-0.442716]
[0.087122,-485.1029,2.14763,-0.442716]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,12.83078569,12.83078569,2.82,0.1]
["Age",3,19.36804355,6.45601452,1.4,0.2555]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,12.83078569,12.83078569,2.82,0.1]
["Age",3,19.36804355,6.45601452,1.4,0.2555]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Bacteroidetes Bacteroidetes"]
["Dependent Variable: Bacteroidetes Bacteroidetes"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,15.38827019,15.38827019,11.2,0.0016]
["Model",3,17.89293454,5.96431151,4.32,0.0094,{"$nulls":30},"Error",46,63.22804959,1.37452282]
["Error",44,60.72338523,1.38007694,{"$nulls":32},"Corrected Total",47,78.61631977]
["Corrected Total",47,78.61631977]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Bacteroidetes Mean"]
["R-Square","Coeff Var","Root MSE","Bacteroidetes Mean",{"$nulls":32},0.195739,20.98698,1.1724,5.586324]
[0.227598,21.02934,1.174767,5.586324]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,15.38827019,15.38827019,11.2,0.0016]
["Age",3,17.89293454,5.96431151,4.32,0.0094]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,15.38827019,15.38827019,11.2,0.0016]
["Age",3,17.89293454,5.96431151,4.32,0.0094]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Ralstonia Ralstonia"]
["Dependent Variable: Ralstonia Ralstonia"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,13.8501248,13.8501248,9.8,0.003]
["Model",3,15.90843507,5.30281169,3.71,0.0184,{"$nulls":30},"Error",46,64.99474494,1.41292924]
["Error",44,62.93643467,1.43037352,{"$nulls":32},"Corrected Total",47,78.84486973]
["Corrected Total",47,78.84486973]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Ralstonia Mean"]
["R-Square","Coeff Var","Root MSE","Ralstonia Mean",{"$nulls":32},0.175663,22.76151,1.188667,5.222267]
[0.201769,22.90159,1.195982,5.222267]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,13.8501248,13.8501248,9.8,0.003]
["Age",3,15.90843507,5.30281169,3.71,0.0184]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,13.8501248,13.8501248,9.8,0.003]
["Age",3,15.90843507,5.30281169,3.71,0.0184]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: P__apium P# apium"]
["Dependent Variable: P__apium P# apium"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,117.0784412,117.0784412,90.23,"<.0001"]
["Model",3,119.2937186,39.7645729,30.44,"<.0001",{"$nulls":30},"Error",46,59.688022,1.2975657]
["Error",44,57.4727445,1.3061987,{"$nulls":32},"Corrected Total",47,176.7664631]
["Corrected Total",47,176.7664631]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","P__apium Mean"]
["R-Square","Coeff Var","Root MSE","P__apium Mean",{"$nulls":32},0.662334,55.25203,1.139107,2.061657]
[0.674866,55.43552,1.142891,2.061657]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,117.0784412,117.0784412,90.23,"<.0001"]
["Age",3,119.2937186,39.7645729,30.44,"<.0001"]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,117.0784412,117.0784412,90.23,"<.0001"]
["Age",3,119.2937186,39.7645729,30.44,"<.0001"]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: L__kunkeei L# kunkeei"]
["Dependent Variable: L__kunkeei L# kunkeei"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,5.65463355,5.65463355,2.77,0.1028]
["Model",3,28.27203138,9.42401046,5.82,1.9E-3,{"$nulls":30},"Error",46,93.86931211,2.04063722]
["Error",44,71.25191428,1.61936169,{"$nulls":32},"Corrected Total",47,99.52394566]
["Corrected Total",47,99.52394566]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","L__kunkeei Mean"]
["R-Square","Coeff Var","Root MSE","L__kunkeei Mean",{"$nulls":32},0.056817,-64.41392,1.428509,-2.217702]
[0.284073,-57.38108,1.272541,-2.217702]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,5.65463355,5.65463355,2.77,0.1028]
["Age",3,28.27203138,9.42401046,5.82,1.9E-3]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,5.65463355,5.65463355,2.77,0.1028]
["Age",3,28.27203138,9.42401046,5.82,1.9E-3]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Enterococcus_faecalis Enterococcus faecalis"]
["Dependent Variable: Enterococcus_faecalis Enterococcus faecalis"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,10.21771283,10.21771283,5.5,0.0234]
["Model",3,34.20986796,11.40328932,8.17,0.0002,{"$nulls":30},"Error",46,85.43216474,1.85722097]
["Error",44,61.4400096,1.39636385,{"$nulls":32},"Corrected Total",47,95.64987756]
["Corrected Total",47,95.64987756]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Enterococcus_faecalis Mean"]
["R-Square","Coeff Var","Root MSE","Enterococcus_faecalis Mean",{"$nulls":32},0.106824,-52.19134,1.362799,-2.611159]
[0.357657,-45.25493,1.181678,-2.611159]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,10.21771283,10.21771283,5.5,0.0234]
["Age",3,34.20986796,11.40328932,8.17,0.0002]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,10.21771283,10.21771283,5.5,0.0234]
["Age",3,34.20986796,11.40328932,8.17,0.0002]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Caulobacterales Caulobacterales"]
["Dependent Variable: Caulobacterales Caulobacterales"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,16.25278104,16.25278104,11.5,1.4E-3]
["Model",3,18.08516278,6.02838759,4.2,0.0107,{"$nulls":30},"Error",46,64.9952239,1.41293965]
["Error",44,63.16284216,1.43551914,{"$nulls":32},"Corrected Total",47,81.24800494]
["Corrected Total",47,81.24800494]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Caulobacterales Mean"]
["R-Square","Coeff Var","Root MSE","Caulobacterales Mean",{"$nulls":32},0.200039,33.03456,1.188671,3.598266]
[0.222592,33.29747,1.198132,3.598266]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,16.25278104,16.25278104,11.5,1.4E-3]
["Age",3,18.08516278,6.02838759,4.2,0.0107]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,16.25278104,16.25278104,11.5,1.4E-3]
["Age",3,18.08516278,6.02838759,4.2,0.0107]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: F__perrara F# perrara"]
["Dependent Variable: F__perrara F# perrara"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,119.6838032,119.6838032,15.31,0.0003]
["Model",3,120.4158487,40.1386162,4.92,0.0049,{"$nulls":30},"Error",46,359.5353056,7.8159849]
["Error",44,358.8032601,8.1546195,{"$nulls":32},"Corrected Total",47,479.2191088]
["Corrected Total",47,479.2191088]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","F__perrara Mean"]
["R-Square","Coeff Var","Root MSE","F__perrara Mean",{"$nulls":32},0.249748,-232.7701,2.795708,-1.20106]
[0.251275,-237.7591,2.855629,-1.20106]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,119.6838032,119.6838032,15.31,0.0003]
["Age",3,120.4158487,40.1386162,4.92,0.0049]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,119.6838032,119.6838032,15.31,0.0003]
["Age",3,120.4158487,40.1386162,4.92,0.0049]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Firm5 Firm5"]
["Dependent Variable: Firm5 Firm5"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,15.4324019,15.4324019,5.5,0.0233]
["Model",3,19.3344285,6.4448095,2.27,0.0939,{"$nulls":30},"Error",46,128.9832381,2.8039834]
["Error",44,125.0812114,2.8427548,{"$nulls":32},"Corrected Total",47,144.4156399]
["Corrected Total",47,144.4156399]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Firm5 Mean"]
["R-Square","Coeff Var","Root MSE","Firm5 Mean",{"$nulls":32},0.106861,-79.61353,1.67451,-2.103298]
[0.13388,-80.16206,1.686047,-2.103298]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,15.43240187,15.43240187,5.5,0.0233]
["Age",3,19.33442852,6.44480951,2.27,0.0939]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,15.43240187,15.43240187,5.5,0.0233]
["Age",3,19.33442852,6.44480951,2.27,0.0939]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Fructobacillus Fructobacillus"]
["Dependent Variable: Fructobacillus Fructobacillus"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,1.55300904,1.55300904,2.11,0.1534]
["Model",3,2.13957046,0.71319015,0.94,0.4285,{"$nulls":30},"Error",46,33.89715773,0.73689473]
["Error",44,33.3105963,0.75705901,{"$nulls":32},"Corrected Total",47,35.45016677]
["Corrected Total",47,35.45016677]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Fructobacillus Mean"]
["R-Square","Coeff Var","Root MSE","Fructobacillus Mean",{"$nulls":32},0.043808,-28.67621,0.858426,-2.993512]
[0.060354,-29.0659,0.870091,-2.993512]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,1.55300904,1.55300904,2.11,0.1534]
["Age",3,2.13957046,0.71319015,0.94,0.4285]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,1.55300904,1.55300904,2.11,0.1534]
["Age",3,2.13957046,0.71319015,0.94,0.4285]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Bradyrhizobium Bradyrhizobium"]
["Dependent Variable: Bradyrhizobium Bradyrhizobium"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,14.77617955,14.77617955,10.52,0.0022]
["Model",3,17.4466661,5.81555537,4.13,0.0115,{"$nulls":30},"Error",46,64.58974931,1.40412498]
["Error",44,61.91926276,1.40725597,{"$nulls":32},"Corrected Total",47,79.36592886]
["Corrected Total",47,79.36592886]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Bradyrhizobium Mean"]
["R-Square","Coeff Var","Root MSE","Bradyrhizobium Mean",{"$nulls":32},0.186178,30.10979,1.184958,3.935456]
[0.219826,30.14334,1.186278,3.935456]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,14.77617955,14.77617955,10.52,0.0022]
["Age",3,17.4466661,5.81555537,4.13,0.0115]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,14.77617955,14.77617955,10.52,0.0022]
["Age",3,17.4466661,5.81555537,4.13,0.0115]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Clostridiales Clostridiales"]
["Dependent Variable: Clostridiales Clostridiales"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,10.908269,10.908269,5.59,0.0223]
["Model",3,20.4071622,6.8023874,3.73,0.0179,{"$nulls":30},"Error",46,89.7016184,1.9500352]
["Error",44,80.2027253,1.8227892,{"$nulls":32},"Corrected Total",47,100.6098874]
["Corrected Total",47,100.6098874]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Clostridiales Mean"]
["R-Square","Coeff Var","Root MSE","Clostridiales Mean",{"$nulls":32},0.108421,-53.35801,1.396437,-2.617108]
[0.202835,-51.58775,1.350107,-2.617108]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,10.90826902,10.90826902,5.59,0.0223]
["Age",3,20.40716215,6.80238738,3.73,0.0179]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,10.90826902,10.90826902,5.59,0.0223]
["Age",3,20.40716215,6.80238738,3.73,0.0179]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Burkholderiales Burkholderiales"]
["Dependent Variable: Burkholderiales Burkholderiales"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,15.93227138,15.93227138,9.46,0.0035]
["Model",3,19.27391959,6.42463986,3.81,0.0164,{"$nulls":30},"Error",46,77.51279597,1.68506078]
["Error",44,74.17114776,1.6857079,{"$nulls":32},"Corrected Total",47,93.44506735]
["Corrected Total",47,93.44506735]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Burkholderiales Mean"]
["R-Square","Coeff Var","Root MSE","Burkholderiales Mean",{"$nulls":32},0.170499,33.52712,1.298099,3.871787]
[0.206259,33.53356,1.298348,3.871787]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,15.93227138,15.93227138,9.46,0.0035]
["Age",3,19.27391959,6.42463986,3.81,0.0164]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,15.93227138,15.93227138,9.46,0.0035]
["Age",3,19.27391959,6.42463986,3.81,0.0164]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: G__apicola G# apicola"]
["Dependent Variable: G__apicola G# apicola"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,121.7238911,121.7238911,20.25,"<.0001"]
["Model",3,123.0187299,41.0062433,6.55,0.0009,{"$nulls":30},"Error",46,276.572114,6.0124373]
["Error",44,275.2772752,6.2563017,{"$nulls":32},"Corrected Total",47,398.2960051]
["Corrected Total",47,398.2960051]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","G__apicola Mean"]
["R-Square","Coeff Var","Root MSE","G__apicola Mean",{"$nulls":32},0.305612,-223.0458,2.452027,-1.099338]
[0.308863,-227.5242,2.50126,-1.099338]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,121.7238911,121.7238911,20.25,"<.0001"]
["Age",3,123.0187299,41.0062433,6.55,0.0009]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,121.7238911,121.7238911,20.25,"<.0001"]
["Age",3,123.0187299,41.0062433,6.55,0.0009]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Acinetobacter Acinetobacter"]
["Dependent Variable: Acinetobacter Acinetobacter"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,0.25696878,0.25696878,0.49,0.4855]
["Model",3,0.95624976,0.31874992,0.6,0.6157,{"$nulls":30},"Error",46,23.91076487,0.51979924]
["Error",44,23.21148389,0.52753372,{"$nulls":32},"Corrected Total",47,24.16773365]
["Corrected Total",47,24.16773365]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Acinetobacter Mean"]
["R-Square","Coeff Var","Root MSE","Acinetobacter Mean",{"$nulls":32},0.010633,-22.83013,0.720971,-3.15798]
[0.039567,-22.99936,0.726315,-3.15798]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,0.25696878,0.25696878,0.49,0.4855]
["Age",3,0.95624976,0.31874992,0.6,0.6157]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,0.25696878,0.25696878,0.49,0.4855]
["Age",3,0.95624976,0.31874992,0.6,0.6157]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Serratia Serratia"]
["Dependent Variable: Serratia Serratia"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,370.7528165,370.7528165,169.26,"<.0001"]
["Model",3,373.4509757,124.4836586,55.86,"<.0001",{"$nulls":30},"Error",46,100.7573331,2.1903768]
["Error",44,98.059174,2.2286176,{"$nulls":32},"Corrected Total",47,471.5101496]
["Corrected Total",47,471.5101496]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Serratia Mean"]
["R-Square","Coeff Var","Root MSE","Serratia Mean",{"$nulls":32},0.786309,-439.1567,1.479992,-0.337008]
[0.792032,-442.9736,1.492856,-0.337008]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,370.7528165,370.7528165,169.26,"<.0001"]
["Age",3,373.4509757,124.4836586,55.86,"<.0001"]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,370.7528165,370.7528165,169.26,"<.0001"]
["Age",3,373.4509757,124.4836586,55.86,"<.0001"]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Brenneria_quercina Brenneria quercina"]
["Dependent Variable: Brenneria_quercina Brenneria quercina"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,0.00960043,0.00960043,0.02,0.8878]
["Model",3,2.70775959,0.90258653,2.06,0.119,{"$nulls":30},"Error",46,21.95422933,0.47726585]
["Error",44,19.25607017,0.43763796,{"$nulls":32},"Corrected Total",47,21.96382975]
["Corrected Total",47,21.96382975]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Brenneria_quercina Mean"]
["R-Square","Coeff Var","Root MSE","Brenneria_quercina Mean",{"$nulls":32},4.37E-4,-21.47477,0.690844,-3.217005]
[0.123283,-20.56391,0.661542,-3.217005]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,0.00960043,0.00960043,0.02,0.8878]
["Age",3,2.70775959,0.90258653,2.06,0.119]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,0.00960043,0.00960043,0.02,0.8878]
["Age",3,2.70775959,0.90258653,2.06,0.119]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: S__alvi S# alvi"]
["Dependent Variable: S__alvi S# alvi"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,218.9519155,218.9519155,87.04,"<.0001"]
["Model",3,221.3739153,73.7913051,28.66,"<.0001",{"$nulls":30},"Error",46,115.7204282,2.5156615]
["Error",44,113.2984284,2.5749643,{"$nulls":32},"Corrected Total",47,334.6723437]
["Corrected Total",47,334.6723437]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","S__alvi Mean"]
["R-Square","Coeff Var","Root MSE","S__alvi Mean",{"$nulls":32},0.654228,-260.5081,1.586084,-0.608842]
[0.661465,-263.5607,1.60467,-0.608842]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,218.9519155,218.9519155,87.04,"<.0001"]
["Age",3,221.3739153,73.7913051,28.66,"<.0001"]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,218.9519155,218.9519155,87.04,"<.0001"]
["Age",3,221.3739153,73.7913051,28.66,"<.0001"]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Cyanobacteria Cyanobacteria"]
["Dependent Variable: Cyanobacteria Cyanobacteria"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,19.78888661,19.78888661,13.23,0.0007]
["Model",3,21.29436427,7.09812142,4.64,6.6E-3,{"$nulls":30},"Error",46,68.8240916,1.4961759]
["Error",44,67.31861393,1.5299685,{"$nulls":32},"Corrected Total",47,88.6129782]
["Corrected Total",47,88.6129782]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Cyanobacteria Mean"]
["R-Square","Coeff Var","Root MSE","Cyanobacteria Mean",{"$nulls":32},0.223318,42.13264,1.223183,2.903171]
[0.240308,42.60579,1.236919,2.903171]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,19.78888661,19.78888661,13.23,0.0007]
["Age",3,21.29436427,7.09812142,4.64,6.6E-3]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,19.78888661,19.78888661,13.23,0.0007]
["Age",3,21.29436427,7.09812142,4.64,6.6E-3]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Bifido Bifido"]
["Dependent Variable: Bifido Bifido"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,6.6332935,6.6332935,4.47,0.0399]
["Model",3,9.11022086,3.03674029,2.03,0.1232,{"$nulls":30},"Error",46,68.23330766,1.48333278]
["Error",44,65.7563803,1.49446319,{"$nulls":32},"Corrected Total",47,74.86660116]
["Corrected Total",47,74.86660116]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Bifido Mean"]
["R-Square","Coeff Var","Root MSE","Bifido Mean",{"$nulls":32},0.088602,-42.59355,1.217921,-2.859404]
[0.121686,-42.75305,1.222482,-2.859404]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,6.6332935,6.6332935,4.47,0.0399]
["Age",3,9.11022086,3.03674029,2.03,0.1232]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,6.6332935,6.6332935,4.47,0.0399]
["Age",3,9.11022086,3.03674029,2.03,0.1232]
[]
[]
[]
[]
[]
[{"$nulls":36},"The SAS System"]
["The SAS System"]
[{"$nulls":36},"The GLM Procedure"]
["The GLM Procedure"]
[{"$nulls":36},"Dependent Variable: Enterobacteriaceae Enterobacteriaceae"]
["Dependent Variable: Enterobacteriaceae Enterobacteriaceae"]
[{"$nulls":36},"Source","DF","Sum of Squares","Mean Square","F Value","Pr > F"]
["Source","DF","Sum of Squares","Mean Square","F Value","Pr > F",{"$nulls":30},"Model",1,0.1853064,0.1853064,0.03,0.8563]
["Model",3,53.065179,17.688393,3.81,0.0163,{"$nulls":30},"Error",46,256.9399402,5.5856509]
["Error",44,204.0600677,4.6377288,{"$nulls":32},"Corrected Total",47,257.1252466]
["Corrected Total",47,257.1252466]
[{"$nulls":36},"R-Square","Coeff Var","Root MSE","Enterobacteriaceae Mean"]
["R-Square","Coeff Var","Root MSE","Enterobacteriaceae Mean",{"$nulls":32},0.000721,-137.9848,2.363398,-1.712796]
[0.206379,-125.7323,2.153539,-1.712796]
[{"$nulls":36},"Source","DF","Type I SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type I SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,0.1853064,0.1853064,0.03,0.8563]
["Age",3,53.06517896,17.68839299,3.81,0.0163]
[{"$nulls":36},"Source","DF","Type III SS","Mean Square","F Value","Pr > F"]
["Source","DF","Type III SS","Mean Square","F Value","Pr > F",{"$nulls":30},"Phenotype",1,0.1853064,0.1853064,0.03,0.8563]
["Age",3,53.06517896,17.68839299,3.81,0.0163]

{"sheet":"Fig. S1 Cluster analysis","index":6,"n_rows":99,"n_cols":42,"rows_kept":99}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
[]
["Figure S1. Cluster analyses by phenotype, age and site."]
[]
[null,"Principle Components Analysis",{"$nulls":9},"By PHENOTYPE",{"$nulls":15},"By AGE",{"$nulls":13},"By SITE"]
{"$rows_empty":46}
[null,"Canonical Correlation Analysis",{"$nulls":9},"By PHENOTYPE",{"$nulls":15},"By AGE",{"$nulls":13},"By SITE"]
{"$rows_empty":45}
[null,"Principle Coordinates Analysis ",{"$nulls":9},"by PHENOTYPE",{"$nulls":15},"By AGE",{"$nulls":13},"By SITE"]

{"sheet":"Fig. S2 Bar chart","index":7,"n_rows":4,"n_cols":1,"rows_kept":4}
["Title: Microbiomes associated with European foul brood disease, and idiopathic brood disease syndrome in honey bees."]
["Authors: Kirk E. Anderson1,*, Amy S. Floyd1,2, Patrick Maes2, Brendon M. Mott1 and Duan C. Copeland,1,3"]
[]
["Figure S2. Bar chart depicting the mean relative abundance of OTUs by site and disease diagnosis. "]