{"text_format":"3","workbook":"xls","n_sheets":1,"sheets":["Tab S1"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Tab S1","index":0,"n_rows":216,"n_cols":9,"rows_kept":216,"flags":["formulas_cached_only"]}
["Header","--------------------------------------------------------"]
[]
["Search title","Submitted from Untitled by Mascot Daemon on MSER"]
["Timestamp","2015-07-23T07:46:46Z"]
["User"]
["Email"]
["Report URI","http://192.168.30.66/mascot/cgi/master_results.pl?file=../data/20150723/F003697.dat"]
["Peak list data path","E:\\201507\\dgxy15k.CID.ITMS.mgf"]
["Peak list format","Mascot generic"]
["Search type","MIS"]
["Mascot version","2.3.02"]
["Database","SPROT_1407"]
["Fasta file","uniprot_sprot.fasta"]
["Total sequences",546000]
["Total residues",194259968]
["Sequences after taxonomy filter",7920]
["Number of queries",1858]
[]
["Decoy","--------------------------------------------------------"]
[]
["Number of matches above identity threshold in search of real database",161]
["Number of matches above identity threshold in search of decoy database",0]
[]
["Variable modifications","--------------------------------------------------------"]
[]
["Identifier","Name","Delta","Neutral loss(es)"]
[1,"Acetyl (Protein N-term)",42.010565]
[2,"Oxidation (M)",15.994915,0,63.998285]
[]
["Search Parameters","--------------------------------------------------------"]
[]
["Taxonomy filter",". . . . . . . . . . . . . . . . Rattus"]
["Enzyme","Trypsin"]
["Maximum Missed Cleavages",1]
["Fixed modifications"]
["Variable modifications","Acetyl (Protein N-term),Oxidation (M)"]
["Peptide Mass Tolerance",200]
["Peptide Mass Tolerance Units","ppm"]
["Fragment Mass Tolerance",0.6]
["Fragment Mass Tolerance Units","Da"]
["Mass values","Monoisotopic"]
["Instrument type","ESI-TRAP"]
["Decoy database also searched",1]
[]
["Format parameters","--------------------------------------------------------"]
[]
["Significance threshold",0.05]
["Max. number of hits",0]
["Use MudPIT protein scoring",1]
["Ions score cut-off",13]
["Include same-set proteins"]
["Include sub-set proteins",0]
["Include unassigned",0]
["Require bold red",0]
["Use homology threshold",0]
["Group protein families",0]
["Re-score using Percolator",1]
[]
["Protein hits","--------------------------------------------------------"]
[]
["prot_hit_num","prot_acc","prot_desc","prot_score","prot_mass","prot_matches","prot_matches_sig","prot_sequences","prot_sequences_sig"]
[1,"VIME_RAT","Vimentin OS=Rattus norvegicus GN=Vim PE=1 SV=2",1323,53700,14,14,12,12]
[]
[2,"K1C17_RAT","Keratin, type I cytoskeletal 17 OS=Rattus norvegicus GN=Krt17 PE=2 SV=1",823,48093,7,7,7,7]
[]
[3,"H4_RAT","Histone H4 OS=Rattus norvegicus GN=Hist1h4b PE=1 SV=2",701,11360,9,9,6,6]
[]
[4,"K1C42_RAT","Keratin, type I cytoskeletal 42 OS=Rattus norvegicus GN=Krt42 PE=3 SV=1",683,50182,6,6,6,6]
[]
[5,"K2C1_RAT","Keratin, type II cytoskeletal 1 OS=Rattus norvegicus GN=Krt1 PE=2 SV=1",594,64791,8,8,7,7]
[]
[6,"K1C10_RAT","Keratin, type I cytoskeletal 10 OS=Rattus norvegicus GN=Krt10 PE=3 SV=1",434,56470,6,6,6,6]
[]
[7,"COF1_RAT","Cofilin-1 OS=Rattus norvegicus GN=Cfl1 PE=1 SV=3",402,18521,4,4,4,4]
[]
[8,"RL18_RAT","60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=2 SV=2",381,21645,4,4,4,4]
[]
[9,"H2A1C_RAT","Histone H2A type 1-C OS=Rattus norvegicus PE=1 SV=2",355,14097,4,4,3,3]
[]
[10,"TBA1A_RAT","Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1",335,50104,3,3,3,3]
[]
[11,"MYL6_RAT","Myosin light polypeptide 6 OS=Rattus norvegicus GN=Myl6 PE=1 SV=3",330,16964,3,3,3,3]
[]
[12,"RL32_RAT","60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2",323,15850,3,3,2,2]
[]
[13,"RL36_RAT","60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2",321,12260,3,3,2,2]
[]
[14,"H2B1_RAT","Histone H2B type 1 OS=Rattus norvegicus PE=1 SV=2",321,13982,6,6,3,3]
[]
[15,"RL23A_RAT","60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1",316,17684,3,3,3,3]
[]
[16,"TCTP_RAT","Translationally-controlled tumor protein OS=Rattus norvegicus GN=Tpt1 PE=1 SV=1",293,19450,2,2,2,2]
[]
[17,"RL19_RAT","60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1",293,23451,2,2,2,2]
[]
[18,"PPIA_RAT","Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2",291,17863,2,2,2,2]
[]
[19,"ACTB_RAT","Actin, cytoplasmic 1 OS=Rattus norvegicus GN=Actb PE=1 SV=1",289,41710,2,2,2,2]
[]
[20,"K2C5_RAT","Keratin, type II cytoskeletal 5 OS=Rattus norvegicus GN=Krt5 PE=1 SV=1",286,61788,6,6,6,6]
[]
[21,"NDKA_RAT","Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1 SV=1",285,17182,3,3,3,3]
[]
[22,"RS10_RAT","40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1",272,18904,2,2,2,2]
[]
[23,"PRDX1_RAT","Peroxiredoxin-1 OS=Rattus norvegicus GN=Prdx1 PE=1 SV=1",257,22095,3,3,3,3]
[]
[24,"H2A1_RAT","Histone H2A type 1 OS=Rattus norvegicus PE=1 SV=2",243,14069,4,4,3,3]
[]
[25,"RL24_RAT","60S ribosomal protein L24 OS=Rattus norvegicus GN=Rpl24 PE=2 SV=1",240,17768,2,2,1,1]
[]
[26,"K2C73_RAT","Keratin, type II cytoskeletal 73 OS=Rattus norvegicus GN=Krt73 PE=1 SV=1",230,60349,3,3,3,3]
[]
[27,"K2C75_RAT","Keratin, type II cytoskeletal 75 OS=Rattus norvegicus GN=Krt75 PE=3 SV=2",229,58991,5,5,5,5]
[]
[28,"K2C8_RAT","Keratin, type II cytoskeletal 8 OS=Rattus norvegicus GN=Krt8 PE=1 SV=3",216,53985,5,5,5,5]
[]
[29,"RL17_RAT","60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3",199,21383,3,3,3,3]
[]
[30,"RAB1A_RAT","Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3",182,22663,2,2,2,2]
[]
[31,"K2C1B_RAT","Keratin, type II cytoskeletal 1b OS=Rattus norvegicus GN=Krt77 PE=3 SV=1",172,57220,3,3,3,3]
[]
[32,"H14_RAT","Histone H1.4 OS=Rattus norvegicus GN=Hist1h1e PE=1 SV=3",163,21974,2,2,2,2]
[]
[33,"TAGL2_RAT","Transgelin-2 OS=Rattus norvegicus GN=Tagln2 PE=2 SV=1",158,22379,3,3,3,3]
[]
[34,"RAB1B_RAT","Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1",153,22149,2,2,2,2]
[]
[35,"ATPO_RAT","ATP synthase subunit O, mitochondrial OS=Rattus norvegicus GN=Atp5o PE=1 SV=1",153,23383,1,1,1,1]
[]
[36,"MRLCA_RAT","Myosin regulatory light chain RLC-A OS=Rattus norvegicus GN=Rlc-a PE=2 SV=2",153,19883,1,1,1,1]
[]
[37,"THIO_RAT","Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2",153,11666,1,1,1,1]
[]
[38,"UBB_RAT","Polyubiquitin-B OS=Rattus norvegicus GN=Ubb PE=1 SV=1",153,34348,1,1,1,1]
[]
[39,"EF1A1_RAT","Elongation factor 1-alpha 1 OS=Rattus norvegicus GN=Eef1a1 PE=1 SV=1",153,50082,1,1,1,1]
[]
[40,"GSTP1_RAT","Glutathione S-transferase P OS=Rattus norvegicus GN=Gstp1 PE=1 SV=2",153,23424,1,1,1,1]
[]
[41,"RLA1_RAT","60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1",153,11491,1,1,1,1]
[]
[42,"TRY1_RAT","Anionic trypsin-1 OS=Rattus norvegicus GN=Prss1 PE=1 SV=1",153,25943,1,1,1,1]
[]
[43,"RAB2A_RAT","Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1",153,23521,1,1,1,1]
[]
[44,"RLA2_RAT","60S acidic ribosomal protein P2 OS=Rattus norvegicus GN=Rplp2 PE=1 SV=2",153,11685,1,1,1,1]
[]
[45,"UB2V2_RAT","Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus GN=Ube2v2 PE=1 SV=3",153,16342,1,1,1,1]
[]
[46,"RAB6A_RAT","Ras-related protein Rab-6A OS=Rattus norvegicus GN=Rab6a PE=2 SV=2",153,23575,1,1,1,1]
[]
[47,"RS9_RAT","40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 PE=1 SV=4",153,22578,1,1,1,1]
[]
[48,"RS14_RAT","40S ribosomal protein S14 OS=Rattus norvegicus GN=Rps14 PE=2 SV=3",153,16249,1,1,1,1]
[]
[49,"RAB15_RAT","Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1",153,24268,1,1,1,1]
[]
[50,"RS18_RAT","40S ribosomal protein S18 OS=Rattus norvegicus GN=Rps18 PE=1 SV=3",153,17708,1,1,1,1]
[]
[51,"K22E_RAT","Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus GN=Krt2 PE=3 SV=1",153,69085,1,1,1,1]
[]
[52,"RL27A_RAT","60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3",153,16608,1,1,1,1]
[]
[53,"H31_RAT","Histone H3.1 OS=Rattus norvegicus PE=1 SV=3",153,15394,1,1,1,1]
[]
[54,"K2C6A_RAT","Keratin, type II cytoskeletal 6A OS=Rattus norvegicus GN=Krt6a PE=1 SV=1",149,59213,3,3,3,3]
[]
[55,"RL12_RAT","60S ribosomal protein L12 OS=Rattus norvegicus GN=Rpl12 PE=2 SV=1",122,17835,1,1,1,1]
[]
[56,"DEST_RAT","Destrin OS=Rattus norvegicus GN=Dstn PE=1 SV=3",112,18522,1,1,1,1]
[]
[57,"RS25_RAT","40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 PE=2 SV=1",108,13734,2,2,2,2]
[]
[58,"PADI2_RAT","Protein-arginine deiminase type-2 OS=Rattus norvegicus GN=Padi2 PE=1 SV=1",104,75308,1,1,1,1]
[]
[59,"RL35_RAT","60S ribosomal protein L35 OS=Rattus norvegicus GN=Rpl35 PE=1 SV=3",93,14544,3,3,2,2]
[]
[60,"RL11_RAT","60S ribosomal protein L11 OS=Rattus norvegicus GN=Rpl11 PE=1 SV=2",84,20240,1,1,1,1]
[]
[61,"PPIB_RAT","Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=1 SV=3",75,23788,1,1,1,1]
[]
[62,"RL31_RAT","60S ribosomal protein L31 OS=Rattus norvegicus GN=Rpl31 PE=2 SV=1",70,14454,1,1,1,1]
[]
[63,"RL14_RAT","60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3",60,23324,1,1,1,1]
[]
[64,"RL23_RAT","60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1",53,14856,1,1,1,1]
[]
[65,"RL27_RAT","60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2",50,15788,2,2,2,2]
[]
[66,"RS8_RAT","40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2",47,24190,1,1,1,1]
[]
[67,"RS26_RAT","40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3",44,13007,2,2,2,2]
[]
[68,"TEP1_RAT","Telomerase protein component 1 OS=Rattus norvegicus GN=Tep1 PE=1 SV=1",43,291524,1,1,1,1]
[]
[69,"TCP4_RAT","Activated RNA polymerase II transcriptional coactivator p15 OS=Rattus norvegicus GN=Sub1 PE=2 SV=3",41,14432,1,1,1,1]
[]
[70,"RL13_RAT","60S ribosomal protein L13 OS=Rattus norvegicus GN=Rpl13 PE=1 SV=2",41,24294,1,1,1,1]
[]
[71,"RL13A_RAT","60S ribosomal protein L13a OS=Rattus norvegicus GN=Rpl13a PE=1 SV=2",39,23461,1,1,1,1]
[]
[72,"RS20_RAT","40S ribosomal protein S20 OS=Rattus norvegicus GN=Rps20 PE=3 SV=1",33,13364,1,1,1,1]
[]
[73,"TBB2A_RAT","Tubulin beta-2A chain OS=Rattus norvegicus GN=Tubb2a PE=1 SV=1",30,49875,1,1,1,1]
[]
[74,"ARF4_RAT","ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2",30,20384,1,1,1,1]
[]
[75,"K2C72_RAT","Keratin, type II cytoskeletal 72 OS=Rattus norvegicus GN=Krt72 PE=3 SV=2",27,56816,2,2,2,2]
[]
[76,"RL29_RAT","60S ribosomal protein L29 OS=Rattus norvegicus GN=Rpl29 PE=1 SV=3",27,17315,1,1,1,1]
[]
[77,"RS19_RAT","40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3",19,16076,1,1,1,1]
[]
[78,"REEP5_RAT","Receptor expression-enhancing protein 5 OS=Rattus norvegicus GN=Reep5 PE=1 SV=1",17,21417,1,1,1,1]