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["Table S9. CLE motifs used for finding the optimal amino acid substitution matrix."]
["Gene ID","Species","CLE motif*"]
["AT1G05065_CLE20","A. thaliana","RKVKTGSNPLHN"]
["AT1G06225_CLE3","A. thaliana","RLSPGGPDPRHH"]
["AT1G25425_CLE43","A. thaliana","RRIPSSPDRLHN"]
["AT1G26600_CLE9","A. thaliana","RLVPSGPNPLHN"]
["AT1G49005_CLE11","A. thaliana","RVVPSGPNPLHH"]
["AT1G63245_CLE14","A. thaliana","RLVPKGPNPLHN"]
["AT1G66145_CLE18","A. thaliana","RQIPTGPDPLHN"]
["AT1G67775_CLE8","A. thaliana","RRVPTGPNPLHH"]
["AT1G68795_CLE12","A. thaliana","RRVPSGPNPLHH"]
["AT1G69320_CLE10","A. thaliana","RLVPSGPNPLHN"]
["AT1G69588_CLE45","A. thaliana","RRVRRGSDPIHN"]
["AT1G69970_CLE26","A. thaliana","RKVPRGPDPIHN"]
["AT1G70895_CLE17","A. thaliana","RVVHTGPNPLHN"]
["AT1G73165_CLE1","A. thaliana","RLSPGGPDPRHH"]
["AT1G73965_CLE13","A. thaliana","RLVPSGPNPLHH"]
["AT2G01505_CLE16","A. thaliana","RLVHTGPNPLHN"]
["AT2G27250_CLV3","A. thaliana","RTVPSGPDPLHH"]
["AT2G31081_CLE4","A. thaliana","RLSPGGPDPRHH"]
["AT2G31082_CLE7","A. thaliana","RFSPGGPDPQHH"]
["AT2G31083_CLE5","A. thaliana","RVSPGGPDPQHH"]
["AT2G31085_CLE6","A. thaliana","RVSPGGPDPQHH"]
["AT2G34925_CLE42","A. thaliana","HGVPSGPNPISN"]
["AT3G24225_CLE19","A. thaliana","RVIPTGPNPLHN"]
["AT3G24770_CLE41","A. thaliana","HEVPSGPNPISN"]
["AT3G25905_CLE27","A. thaliana","RIVPSCPDPLHN"]
["AT3G28455_CLE25","A. thaliana","RKVPNGPDPIHN"]
["AT4G13195_CLE44","A. thaliana","HEVPSGPNPISN"]
["AT4G18510_CLE2","A. thaliana","RLSPGGPDPQHH"]
["AT5G12235_CLE22","A. thaliana","RRVFTGPNPLHN"]
["AT5G12990_CLE40","A. thaliana","RQVPTGSDPLHH"]
["AT5G59305_CLE46","A. thaliana","HKHPSGPNPTGN"]
["AT5G64800_CLE21","A. thaliana","RSIPTGPNPLHN"]
["ATMG01400.1","A. thaliana","NSLNSGPNPLEN"]
["LOC_Os01g03900.1","O. sativa","RRIPSCPDALHN"]
["LOC_Os01g07620.1","O. sativa","RLAPTGSNPLHN"]
["LOC_Os01g23705.1","O. sativa","HQVPTGANPDSN"]
["LOC_Os01g32560.1","O. sativa","RRIPSCPDPLHN"]
["LOC_Os01g48230.1","O. sativa","RLSPGGPDPQHH"]
["LOC_Os01g48260.1","O. sativa","RLSPGGPDPQHH"]
["LOC_Os01g55060.1","O. sativa","REVPGGPDPQHH"]
["LOC_Os01g55080.1","O. sativa","RLSPGGPDPQHH"]
["LOC_Os01g55850.1","O. sativa","RVVPSGPNPLHN"]
["LOC_Os02g05650.1","O. sativa","RVVPTGSNPLHN"]
["LOC_Os02g15200.1","O. sativa","RLSPGGPNPQHH"]
["LOC_Os02g21890.1","O. sativa","RLVPTGPNPLHH"]
["LOC_Os02g36730.1","O. sativa","RRVRRGSDPIHN"]
["LOC_Os02g56490.1","O. sativa","HEVPSGPNPDSN"]
["LOC_Os02g58000.1","O. sativa","RMVPQGPNPLHN"]
["LOC_Os03g25060.1","O. sativa","REVLTGPNPLHN"]
["LOC_Os03g26180.1","O. sativa","WRVRRGSDPIHN"]
["LOC_Os03g48570.1","O. sativa","RKVPNGPDPIHN"]
["LOC_Os03g58870.1","O. sativa","RRVPNGPDPIHN"]
["LOC_Os04g38650.1","O. sativa","RRVRRGSDPIHN"]
["LOC_Os04g39770.1","O. sativa","REVPTGPDPIHH"]
["LOC_Os04g44880.1","O. sativa","RLVPQGSNPLHN"]
["LOC_Os04g56370.1","O. sativa","RRVPTGPNPLHN"]
["LOC_Os05g02620.1","O. sativa","RSVPTGPNPITS"]
["LOC_Os05g02630.1","O. sativa","REVPSGPDPITS"]
["LOC_Os05g07840.1","O. sativa","RFSPTGSNPLHN"]
["LOC_Os05g29870.1","O. sativa","RLTPTGPNPVHN"]
["LOC_Os05g43030.1","O. sativa","RRIPKGPDPIHN"]
["LOC_Os05g43660.1","O. sativa","RLVPTGPNPLHN"]
["LOC_Os05g43895.1","O. sativa","RLSPGGPDPQHH"]
["LOC_Os05g43900.1","O. sativa","RTVPGGPDPQHH"]
["LOC_Os05g48730.1","O. sativa","RRSPGGPDPQHH"]
["LOC_Os05g48740.1","O. sativa","WEVPGGPDPQHH"]
["LOC_Os06g12539.1","O. sativa","RHVPLGPDPAHH"]
["LOC_Os06g34180.1","O. sativa","REVPSGPDPIHH"]
["LOC_Os06g34280.1","O. sativa","RLSPGGPNPQHH"]
["LOC_Os06g34330.1","O. sativa","RLSPGGPNPQHH"]
["LOC_Os06g48220.1","O. sativa","RVVPTGPNPLHN"]
["LOC_Os07g09625.1","O. sativa","RRVPNGPDPIHN"]
["LOC_Os07g26595.1","O. sativa","RRPPPAPDPTHR"]
["LOC_Os08g34030.1","O. sativa","RRVRRGSDPIHN"]
["Sm408679","S. moellendorffii","RLVPSGPDPLHH"]
["Sm409888","S. moellendorffii","HYVRSAPNPMHN"]
["Sm411648","S. moellendorffii","RYVPGGPDPLHH"]
["Sm412987","S. moellendorffii","HSVPSGPNPVGN"]
["Sm416983","S. moellendorffii","HLVPAGPNPLHN"]
["Sm420331","S. moellendorffii","HLVPAGPNPLHN"]
["Sm422369","S. moellendorffii","KLAPAGLDPVHD"]
["Sm86322","S. moellendorffii","RQVPSGADPIHH"]
["MA_10207985g0010","P. abies","HEVPSGPNPISN"]
["MA_10212474g0010","P. abies","HEVAAGPNPTRN"]
["MA_10250564g0010","P. abies","HSVPSNPNPIQN"]
["MA_10260687g0010","P. abies","RTVPTGSNPLHN"]
["MA_10325684g0020","P. abies","REIPGGPDGQHH"]
["MA_10356943g0010","P. abies","HVAPSGPNPGGN"]
["MA_10428646g0010","P. abies","HNVPSGPNPIGN"]
["MA_10431125g0020","P. abies","RRVPNCPDPLHN"]
["MA_112217g0010","P. abies","RKIPGGPDGQHH"]
["MA_126688g0010","P. abies","HEVPSGPNPISN"]
["MA_15112g0010","P. abies","RKVHTGPNPLHN"]
["MA_18107g0030","P. abies","HEVVSGPNPRRS"]
["MA_18841g0010","P. abies","RQIPGGPDPHHH"]
["MA_195857g0010","P. abies","RKVPTGPNPLHN"]
["MA_24844g0010","P. abies","DVAPSGPNPGGN"]
["MA_248710g0010","P. abies","RLVPTGPDPLHN"]
["MA_35076g0010","P. abies","RGYPRGPNPTRY"]
["MA_36132g0010","P. abies","RGYPIGPDPTRY"]
["MA_41364g0010","P. abies","RQVPTGPDPLHH"]
["MA_417256g0010","P. abies","RMVPNGSDPLHN"]
["MA_45023g0010","P. abies","RQIPRGPDGQHH"]
["MA_51564g0010","P. abies","RPRPSGPRPTQN"]
["MA_523338g0010","P. abies","RVVPTGPNPLHN"]
["MA_55741g0010","P. abies","HDVPSGPNPISN"]
["MA_61343g0010","P. abies","DVPPSGPSPCHN"]
["MA_671792g0010","P. abies","HEVPSGPNPISD"]
["MA_71114g0010","P. abies","RNVPSTPNPTQN"]
["MA_7233g0010","P. abies","HEVHSGPNPISN"]
["MA_72760g0010","P. abies","XXVPTGSNPLHN"]
["MA_8623178g0010","P. abies","HDVPSGPNPIGN"]
["MA_878g0010","P. abies","RRVPNGSDPIHN"]
["MA_8926332g0010","P. abies","RQIPRGPDGQHH"]
["MA_9094901g0010","P. abies","PVPPSGPSPCHN"]
["MA_9667g0010","P. abies","HEVDSGPNPTRN"]
["* The listed CLE motifs were used in testing the amino acid substitution matrices."]