{"text_format":"3","workbook":"xls","n_sheets":2,"sheets":["GO_enrichment","KEGG_enrichment"],"not_rendered":{"external_links":2},"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"GO_enrichment","index":0,"n_rows":30,"n_cols":11,"rows_kept":30,"merged":[[0,0,0,10]],"flags":["formulas_cached_only"]}
["Table S3.a: GO enrichment of directionally expressed DEG sets with p < 0.005"]
["GO.ID","Ontology","Description","Gene_Ratio","Background_Ratio","p-value","p.adjust","q-value","gene_ID","Gene Count","gene set"]
["GO:0004672","MF","protein kinase activity  ","12/255","52/6255",{"v":7.84057531470071e-07,"d":"7.84E-07"},0.00011212022700022,0.000107292083253799,"Verticillium_dahliae_newGene_313/VDAG_06124/VDAG_03167/VDAG_05247/VDAG_09170/VDAG_02636/VDAG_08504/VDAG_05273/VDAG_07495/VDAG_05171/VDAG_05585/VDAG_01072",12,"H_up"]
["GO:0006468","BP","protein phosphorylation  ","17/255","158/6255",0.000217646290673293,0.014740954473531,0.0141061765296947,"Verticillium_dahliae_newGene_313/VDAG_06124/VDAG_05160/VDAG_06935/VDAG_07224/VDAG_03167/VDAG_01775/VDAG_05247/VDAG_09170/VDAG_02636/VDAG_05748/VDAG_05273/VDAG_07495/VDAG_05171/VDAG_05585/VDAG_01072/VDAG_02865",17,"H_up"]
["GO:0016491","MF","oxidoreductase activity  ","29/255","361/6255",0.000309250793151,0.014740954473531,0.0141061765296947,"VDAG_07256/VDAG_00496/VDAG_08290/VDAG_00549/VDAG_05839/VDAG_04810/VDAG_06812/VDAG_04722/VDAG_00199/VDAG_08689/VDAG_05838/VDAG_07223/VDAG_01051/VDAG_09043/VDAG_01121/VDAG_09367/VDAG_01565/VDAG_03072/VDAG_09294/VDAG_02991/VDAG_03665/VDAG_03397/VDAG_07771/VDAG_03613/VDAG_07237/VDAG_05923/VDAG_03466/VDAG_07251/VDAG_03326",29,"H_up"]
["GO:0010181","MF","FMN binding  ","7/255","36/6255",0.000521075361793981,0.0186284441841348,0.0178262623771625,"VDAG_07256/VDAG_04810/VDAG_01121/VDAG_03072/VDAG_07177/VDAG_03613/VDAG_07237",7,"H_up"]
["GO:0005618","CC","cell wall  ","4/255","15/6255",0.00257973101155143,0.0737803069303708,0.0706031645266706,"VDAG_07881/VDAG_03685/VDAG_05799/VDAG_05375",4,"H_up"]
["GO:0006950","BP","response to stress  ","11/378","42/6255",{"v":2.64895075476917e-05,"d":"2.65E-05"},0.00229719387235469,0.0021012444857836,"VDAG_04365/VDAG_03902/VDAG_08898/VDAG_08743/VDAG_07616/VDAG_02154/VDAG_00442/VDAG_09146/VDAG_10067/VDAG_05829/VDAG_00375",11,"H_down"]
["GO:0015074","BP","DNA integration  ","6/378","12/6255",{"v":3.16854327221337e-05,"d":"3.17E-05"},0.00229719387235469,0.0021012444857836,"Verticillium_dahliae_newGene_460/Verticillium_dahliae_newGene_1058/Verticillium_dahliae_newGene_844/Verticillium_dahliae_newGene_918/Verticillium_dahliae_newGene_652/Verticillium_dahliae_newGene_61",6,"H_down"]
["GO:0016491","MF","oxidoreductase activity  ","39/378","361/6255",0.000235329802679264,0.0113742737961644,0.0104040544342412,"VDAG_02389/VDAG_02116/VDAG_07329/VDAG_09528/VDAG_05564/VDAG_03344/VDAG_04531/VDAG_06181/VDAG_02801/VDAG_07799/VDAG_07109/VDAG_03485/VDAG_07587/VDAG_07923/VDAG_02519/VDAG_08892/VDAG_05297/VDAG_00779/VDAG_02863/VDAG_07936/VDAG_02413/VDAG_07272/VDAG_04825/VDAG_01830/VDAG_08214/VDAG_02132/VDAG_07797/VDAG_01425/VDAG_04967/VDAG_00849/VDAG_07542/VDAG_04892/VDAG_09228/VDAG_07607/VDAG_03874/VDAG_01655/VDAG_08967/VDAG_01791/VDAG_06143",39,"H_down"]
["GO:0051082","MF","unfolded protein binding  ","6/378","27/6255",0.00467906683666345,0.145671278674349,0.133245597916283,"VDAG_04292/VDAG_00095/VDAG_08489/VDAG_00442/VDAG_04127/VDAG_08967",6,"H_down"]
["GO:0003735","MF","structural constituent of ribosome  ","24/290","124/6255",{"v":1.48952513421386e-09,"d":"1.49E-09"},{"v":2.29386870668934e-07,"d":"2.29E-07"},{"v":2.13237282371668e-07,"d":"2.13E-07"},"VDAG_07089/VDAG_07517/VDAG_04609/VDAG_02507/VDAG_00234/VDAG_10348/VDAG_10225/VDAG_02440/VDAG_09722/VDAG_05679/VDAG_10491/VDAG_02494/VDAG_02602/VDAG_07051/VDAG_09948/VDAG_04358/VDAG_01336/VDAG_06045/VDAG_05786/VDAG_03283/VDAG_00364/VDAG_04766/VDAG_04294/VDAG_09547",24,"M_up"]
["GO:0006412","BP","translation  ","19/290","119/6255",{"v":1.84068598919599e-06,"d":"1.84E-06"},0.000141732821168091,0.000131754365542449,"VDAG_07089/VDAG_04609/VDAG_02507/VDAG_10348/VDAG_10225/VDAG_02440/VDAG_09722/VDAG_05679/VDAG_10491/VDAG_02494/VDAG_07051/VDAG_09948/VDAG_04358/VDAG_01336/VDAG_06045/VDAG_05786/VDAG_00364/VDAG_04766/VDAG_09547",19,"M_up"]
["GO:0005840","CC","ribosome  ","17/290","122/6255",{"v":4.09294031948664e-05,"d":"4.09E-05"},0.00210104269733648,0.00195312239807082,"VDAG_02507/VDAG_00234/VDAG_10348/VDAG_10225/VDAG_05679/VDAG_10491/VDAG_02494/VDAG_07051/VDAG_04358/VDAG_02518/VDAG_01336/VDAG_03283/VDAG_00364/VDAG_04766/VDAG_07533/VDAG_04294/VDAG_09547",17,"M_up"]
["GO:0006414","BP","translational elongation  ","6/290","26/6255",0.000988550115681066,0.0380591794537211,0.0353796883506908,"VDAG_07517/VDAG_08356/VDAG_00234/VDAG_02602/VDAG_03283/VDAG_04294",6,"M_up"]
["GO:0015074","BP","DNA integration  ","7/476","12/6255",{"v":8.00518170735126e-06,"d":"8.01E-06"},0.00120077725610269,0.00105331338254622,"Verticillium_dahliae_newGene_831/Verticillium_dahliae_newGene_656/Verticillium_dahliae_newGene_460/Verticillium_dahliae_newGene_1058/Verticillium_dahliae_newGene_918/Verticillium_dahliae_newGene_652/Verticillium_dahliae_newGene_61",7,"M_down"]
["GO:0004497","MF","monooxygenase activity  ","17/476","90/6255",0.000367774620010001,0.0275830965007501,0.0241956986848685,"VDAG_03932/VDAG_07865/VDAG_01173/VDAG_02119/VDAG_07321/VDAG_06023/VDAG_02181/VDAG_01188/VDAG_07843/VDAG_04690/VDAG_03967/VDAG_05420/VDAG_07888/VDAG_09212/VDAG_04686/VDAG_01663/VDAG_07138",17,"M_down"]
["GO:0050660","MF","flavin adenine dinucleotide binding  ","19/476","111/6255",0.000623434964838313,0.0311717482419157,0.027343638808698,"VDAG_04532/VDAG_05094/VDAG_05979/VDAG_05328/VDAG_08106/VDAG_03968/VDAG_03611/VDAG_02832/VDAG_03495/VDAG_09583/VDAG_08901/VDAG_01698/VDAG_05780/VDAG_08230/VDAG_03899/VDAG_07320/VDAG_03119/VDAG_05357/VDAG_03896",19,"M_down"]
["GO:0008812","MF","choline dehydrogenase activity  ","6/476","20/6255",0.00290091947553931,0.108784480332724,0.0954249827480035,"VDAG_04532/VDAG_05979/VDAG_05328/VDAG_03611/VDAG_09583/VDAG_03896",6,"M_down"]
["GO:0004181","MF","metallocarboxypeptidase activity  ","5/476","15/6255",0.00395131465111346,0.118539439533404,0.103981964502986,"VDAG_07134/VDAG_07290/VDAG_05115/VDAG_07136/VDAG_07183",5,"M_down"]
["GO:0016491","MF","oxidoreductase activity  ","28/204","361/6255",{"v":1.37715526629505e-05,"d":"1.38E-05"},0.00163881476689111,0.00152211897853664,"VDAG_04973/VDAG_07256/VDAG_05053/VDAG_00549/VDAG_07569/VDAG_10133/VDAG_09528/VDAG_05388/VDAG_04810/VDAG_04692/VDAG_06226/VDAG_02801/VDAG_00199/VDAG_08689/VDAG_07223/VDAG_01051/VDAG_09070/VDAG_01121/VDAG_07197/VDAG_04825/VDAG_02991/VDAG_03397/VDAG_07771/VDAG_03613/VDAG_05923/VDAG_02312/VDAG_07251/VDAG_03683",28,"S_up"]
["GO:0042626","MF","ATPase activity, coupled to transmembrane movement of substances  ","6/204","35/6255",0.000822520977123086,0.0489399981388236,0.0454551066304863,"VDAG_04467/VDAG_00514/VDAG_04004/VDAG_04585/VDAG_08191/VDAG_06387",6,"S_up"]
["GO:0004672","MF","protein kinase activity  ","7/204","52/6255",0.00136134868525349,0.054000164515055,0.0501549515619706,"Verticillium_dahliae_newGene_313/VDAG_03167/VDAG_05247/VDAG_09170/VDAG_05171/Verticillium_dahliae_newGene_93/Verticillium_dahliae_newGene_92",7,"S_up"]
["GO:0004252","MF","serine-type endopeptidase activity  ","5/204","34/6255",0.00452184931003919,0.128475219222595,0.119326828999314,"VDAG_03685/VDAG_07176/VDAG_00070/VDAG_03803/VDAG_07131",5,"S_up"]
["GO:0015074","BP","DNA integration  ","6/357","12/6255",{"v":2.28427478174571e-05,"d":"2.28E-05"},0.00326651293789637,0.00290944472201296,"Verticillium_dahliae_newGene_831/Verticillium_dahliae_newGene_656/Verticillium_dahliae_newGene_1058/Verticillium_dahliae_newGene_918/Verticillium_dahliae_newGene_652/Verticillium_dahliae_newGene_61",6,"S_down"]
["GO:0004497","MF","monooxygenase activity  ","14/357","90/6255",0.000514809053808645,0.028305734850344,0.0252115856966627,"VDAG_03932/VDAG_00797/VDAG_01173/VDAG_03813/VDAG_03355/VDAG_07843/VDAG_03967/VDAG_05420/VDAG_04444/VDAG_02868/VDAG_09212/VDAG_05313/VDAG_07138/VDAG_10486",14,"S_down"]
["GO:0020037","MF","heme binding  ","17/357","126/6255",0.000744547205873205,0.028305734850344,0.0252115856966627,"VDAG_02241/VDAG_00797/VDAG_01173/VDAG_05564/VDAG_09115/VDAG_03813/VDAG_03355/VDAG_07843/VDAG_07396/VDAG_03705/VDAG_03967/VDAG_06183/VDAG_05420/VDAG_02868/VDAG_09212/VDAG_05792/VDAG_10486",17,"S_down"]
["GO:0005576","CC","extracellular region  ","14/357","94/6255",0.000806357025036152,0.028305734850344,0.0252115856966627,"VDAG_05030/VDAG_09366/VDAG_09500/VDAG_08139/VDAG_07225/VDAG_03117/VDAG_07238/VDAG_08956/VDAG_07851/VDAG_00808/VDAG_04336/VDAG_01586/VDAG_07406/VDAG_02273",14,"S_down"]
["GO:0016705","MF","oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  ","12/357","75/6255",0.000989711008753287,0.028305734850344,0.0252115856966627,"VDAG_02241/VDAG_03932/VDAG_00797/VDAG_01173/VDAG_03813/VDAG_03355/VDAG_07843/VDAG_03967/VDAG_05420/VDAG_02868/VDAG_09212/VDAG_10486",12,"S_down"]
["GO:0050660","MF","flavin adenine dinucleotide binding  ","15/357","111/6255",0.00148139346875907,0.0353065443387577,0.0314471245122539,"VDAG_09524/VDAG_03861/VDAG_05094/VDAG_05710/VDAG_08106/VDAG_03961/VDAG_03611/VDAG_02832/VDAG_06106/VDAG_08901/VDAG_07424/VDAG_08230/VDAG_03119/VDAG_01149/VDAG_03896",15,"S_down"]

{"sheet":"KEGG_enrichment","index":1,"n_rows":11,"n_cols":10,"rows_kept":11,"merged":[[0,0,0,9]],"flags":["formulas_cached_only"]}
["Table S3.b: KEGG enrichment of directionally expressed DEG sets with q (FDR) < 0.05"]
["KEGG.ID","Description","Gene_Ratio","Background_Ratio","p-value","p.adjust","q-value","gene_ID","Gene Count","Gene set"]
["ko00040","Pentose and glucuronate interconversions","7/50","43/1979",{"v":6.88264175157374e-05,"d":"6.88E-05"},0.00378545296336555,0.0031153010033439,"VDAG_07881/VDAG_00549/VDAG_05344/VDAG_04977/VDAG_07759/VDAG_05799/VDAG_02709",7,"H_up"]
["ko03010","Ribosome","25/111","110/1979",{"v":2.8299469528634e-10,"d":"2.83E-10"},{"v":1.69796817171804e-08,"d":"1.70E-08"},{"v":1.40007901878505e-08,"d":"1.40E-08"},"VDAG_07089/VDAG_07517/VDAG_04609/VDAG_02507/VDAG_00234/VDAG_10348/VDAG_10225/VDAG_02440/VDAG_05679/VDAG_10491/VDAG_02494/VDAG_02602/VDAG_07051/VDAG_09948/VDAG_04358/VDAG_02518/VDAG_01336/VDAG_06045/VDAG_05786/VDAG_03283/VDAG_00364/VDAG_04766/VDAG_07533/VDAG_04294/VDAG_09547",25,"M_up"]
["ko01230","Biosynthesis of amino acids","16/111","121/1979",0.000816192273330381,0.0244857681999114,0.0201900193929094,"VDAG_09751/VDAG_10449/VDAG_10038/VDAG_09037/VDAG_01958/VDAG_02628/VDAG_08289/VDAG_06784/VDAG_00251/VDAG_08589/VDAG_01152/VDAG_03073/VDAG_09297/VDAG_00564/VDAG_01254/VDAG_03037",16,"M_up"]
["ko00380","Tryptophan metabolism","8/73","33/1979",{"v":1.54110601761098e-05,"d":"1.54E-05"},0.000924663610566586,0.000778664093108704,"VDAG_04826/VDAG_07710/VDAG_09115/VDAG_07327/VDAG_10523/VDAG_03079/VDAG_10524/VDAG_07177",8,"M_down"]
["ko00071","Fatty acid degradation","5/73","24/1979",0.00146186034585024,0.0438558103755071,0.0369312087372692,"VDAG_07710/VDAG_07327/VDAG_03969/VDAG_10528/VDAG_07177",5,"M_down"]
["ko00360","Phenylalanine metabolism","5/45","28/1979",0.000322573405029369,0.0104570204298356,0.00929512927096498,"VDAG_02834/VDAG_06372/VDAG_03922/VDAG_06374/VDAG_07251",5,"S_up"]
["ko00350","Tyrosine metabolism","6/45","46/1979",0.000464756463548249,0.0104570204298356,0.00929512927096498,"VDAG_02057/VDAG_06372/VDAG_07414/VDAG_03922/VDAG_06374/VDAG_07251",6,"S_up"]
["ko00410","beta-Alanine metabolism","4/45","26/1979",0.00242143006030492,0.0275511192223082,0.0244898837531629,"VDAG_02801/VDAG_06372/VDAG_08189/VDAG_06374",4,"S_up"]
["ko00040","Pentose and glucuronate interconversions","5/45","43/1979",0.00244898837531629,0.0275511192223082,0.0244898837531629,"VDAG_07881/VDAG_00549/VDAG_06079/VDAG_07759/VDAG_03683",5,"S_up"]