S1_complete_DE_and_expression
=============================

Complete differential expression results at probe and gene level, PCA and t-SNE
coordinates, and the sample correlation matrix. Primary results come from OLS
adjusted for the other factor: sex for the ancestry contrast, ancestry for the
sex contrast. The unadjusted Welch sensitivity analysis is included alongside.

Generated 2026-07-30T14:27:12+00:00 from GSE69683 (series matrix SHA-256 417dc3e348588a49...)
Random seed 42

Contents (9 files):

  MS1_S1A_primary_ancestry_adjusted_OLS.tsv.gz                      3,975,516 bytes
      sha256 330ee9559272a3723c7914067510197fbbc408eab8863cf742f5666dd72ba672
  MS1_S1B_sensitivity_ancestry_welch.tsv.gz                         3,205,701 bytes
      sha256 8d5d40d442e9c2fbf82292a7e2225eb1bf69185d40cd5edaf0729d8963ac8a84
  MS1_S1C_primary_sex_adjusted_OLS.tsv.gz                           3,944,742 bytes
      sha256 8d7bdbcb699064754d5b0fae34f690cb71a1666d3ebeda5b4091a0e6ee2769e2
  MS1_S1D_ancestry_probe_level_annotated.tsv.gz                     4,791,636 bytes
      sha256 6515797487f9a5e1dae2895f42e273cedfcdae87536fec5fb1e8a7f92df8060c
  MS1_S1E_representative_probe_per_gene.tsv.gz                      1,930,384 bytes
      sha256 f3354ea888811b54f24f17a5c0e2926abe675059ffed2589b5f182bb9ade4128
  MS1_S1F_gene_level_ancestry_adjusted_OLS.tsv.gz                   1,588,306 bytes
      sha256 ffe358b3e5a7be96f4a84727a285ba728f9ea50188323cd64e67fdde422a93c3
  MS1_S1_PCA_coordinates.tsv                                            2,021 bytes
      sha256 8bfc9d12403520f31d0fdf863b5bcb980b23c6ac221c4b76d94a3955f006f010
  MS1_S1_sample_correlation_matrix.tsv                                 11,056 bytes
      sha256 dc14909c62cfbb186534641faa09628a34d8abf7a6423d0791bb748a2df6fa82
  MS1_S1_tSNE_coordinates.tsv                                           1,147 bytes
      sha256 47c679dc5c58c6b5ec6839a4475e04b032a54a1883aab0f456ff0a8d25c00a1c