2026-07-28 10:42:56,666 Running on GPU
2026-07-28 10:42:57,123 Found 6 citations for tools or databases
2026-07-28 10:42:57,123 Query 1/1: A0A8S2BEP2_Pmarincola_89c39 (length 376)
2026-07-28 10:43:12,856 Setting max_seq=512, max_extra_seq=5120
2026-07-28 10:44:29,184 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=85.1 pTM=0.79
2026-07-28 10:45:05,300 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=85.4 pTM=0.8 tol=3.09
2026-07-28 10:45:42,871 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=85.6 pTM=0.798 tol=1.67
2026-07-28 10:46:21,338 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=85.8 pTM=0.8 tol=1.72
2026-07-28 10:46:21,339 alphafold2_ptm_model_1_seed_000 took 176.8s (3 recycles)
2026-07-28 10:47:01,330 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=85.1 pTM=0.804
2026-07-28 10:47:41,610 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=85.3 pTM=0.804 tol=2.25
2026-07-28 10:48:20,999 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=85.2 pTM=0.802 tol=0.626
2026-07-28 10:49:00,813 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=85 pTM=0.798 tol=0.302
2026-07-28 10:49:00,814 alphafold2_ptm_model_2_seed_000 took 159.2s (3 recycles)
2026-07-28 10:49:40,536 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=85.9 pTM=0.819
2026-07-28 10:50:20,185 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=86.4 pTM=0.824 tol=2.4
2026-07-28 10:51:00,268 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=86.5 pTM=0.825 tol=1.68
2026-07-28 10:51:39,968 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=86.6 pTM=0.824 tol=1.94
2026-07-28 10:51:39,969 alphafold2_ptm_model_3_seed_000 took 158.9s (3 recycles)
2026-07-28 10:52:19,830 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=85.8 pTM=0.819
2026-07-28 10:52:59,617 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=85.8 pTM=0.818 tol=0.978
2026-07-28 10:53:39,210 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=85.6 pTM=0.816 tol=0.779
2026-07-28 10:54:18,828 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=85.6 pTM=0.816 tol=0.81
2026-07-28 10:54:18,829 alphafold2_ptm_model_4_seed_000 took 158.6s (3 recycles)
2026-07-28 10:54:58,749 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=86.6 pTM=0.829
2026-07-28 10:55:38,697 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=87.6 pTM=0.836 tol=1.51
2026-07-28 10:56:18,197 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=87.8 pTM=0.839 tol=0.458
2026-07-28 10:56:58,108 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=88 pTM=0.84 tol=1.19
2026-07-28 10:56:58,109 alphafold2_ptm_model_5_seed_000 took 159.0s (3 recycles)
2026-07-28 10:56:58,464 reranking models by 'plddt' metric
2026-07-28 10:57:27,306 Relaxation took 28.8s
2026-07-28 10:57:27,306 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=88 pTM=0.84
2026-07-28 10:57:27,307 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=86.6 pTM=0.824
2026-07-28 10:57:27,307 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=85.8 pTM=0.8
2026-07-28 10:57:27,307 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=85.6 pTM=0.816
2026-07-28 10:57:27,308 rank_005_alphafold2_ptm_model_2_seed_000 pLDDT=85 pTM=0.798
2026-07-28 10:57:28,671 Done
