{"text_format":"3","workbook":"xlsx","n_sheets":3,"sheets":["Sheet1","lncRNA_mRNA_co_location","lncRNA_mRNA_co_expression"],"read":"whole","date_system":"1900"}

{"sheet":"Sheet1","index":0,"n_rows":2,"n_cols":2,"rows_kept":2}
[]
[null,"Supporting Table 2. The targets of lncRNAs predicted by co-location and co-expression"]

{"sheet":"lncRNA_mRNA_co_location","index":1,"n_rows":92541,"n_cols":15,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["Chromosome","lncRNA_ID","lncRNA_Gene_ID","lncRNA_Status","lncRNA_Start","lncRNA_End","lncRNA_Strand","mRNA_ID","mRNA_Gene_Id","mRNA_Gene_Description","mRNA_Start","mRNA_End","mRNA_Strand","Distance","Location"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016230_T001","Zm00001d016230","sp|Q8LB08|ADT4_ARATH ADP,ATP carrier protein ER-ANT1 OS=Arabidopsis thaliana GN=ER-ANT1 PE=2 SV=2//6.17064e-79",151213035,151216982,"-",2088,"downstream"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016228_T001","Zm00001d016228",null,151137109,151142706,"-",62285,"upstream"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016228_T003","Zm00001d016228",null,151137128,151142600,"-",62391,"upstream"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016228_T002","Zm00001d016228",null,151137109,151142706,"-",62285,"upstream"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016228_T005","Zm00001d016228",null,151137279,151140497,"-",64494,"upstream"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016228_T004","Zm00001d016228",null,151137129,151142664,"-",62327,"upstream"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016228_T006","Zm00001d016228",null,151137279,151142704,"-",62287,"upstream"]
["chr5","LNC_003902","XLOC_039634","lncRNA",151204992,151210946,"-","Zm00001d016229_T001","Zm00001d016229","sp|Q6PV67|SNZ_ARATH AP2-like ethylene-responsive transcription factor SNZ OS=Arabidopsis thaliana GN=SNZ PE=2 SV=1//1.41651e-07",151210417,151211022,"+",-530,"antisense"]
["chr5","LNC_003903","XLOC_039641","lncRNA",151548554,151553452,"-","Zm00001d016234_T001","Zm00001d016234","sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPJ696.02 PE=1 SV=1//1.43555e-33",151507764,151512142,"-",36411,"upstream"]
["chr5","LNC_003903","XLOC_039641","lncRNA",151548554,151553452,"-","Zm00001d016235_T001","Zm00001d016235","sp|P0C1G8|PSA4A_ORYSJ Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1//1.05593e-06",151552379,151552993,"+",-615,"antisense"]
["chr5","LNC_003900","XLOC_039626","lncRNA",150782408,150782641,"-","Zm00001d016217_T001","Zm00001d016217",null,150753673,150756808,"-",25599,"upstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016230_T001","Zm00001d016230","sp|Q8LB08|ADT4_ARATH ADP,ATP carrier protein ER-ANT1 OS=Arabidopsis thaliana GN=ER-ANT1 PE=2 SV=2//6.17064e-79",151213035,151216982,"-",96694,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016228_T001","Zm00001d016228",null,151137109,151142706,"-",20768,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016228_T003","Zm00001d016228",null,151137128,151142600,"-",20787,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016228_T002","Zm00001d016228",null,151137109,151142706,"-",20768,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016228_T005","Zm00001d016228",null,151137279,151140497,"-",20938,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016227_T001","Zm00001d016227","sp|Q9FJ80|P2A14_ARATH F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1//1.03777e-08",151100013,151100423,"+",15704,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016228_T004","Zm00001d016228",null,151137129,151142664,"-",20788,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016225_T001","Zm00001d016225","sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=PUB4 PE=2 SV=1//0",151044249,151046438,"-",69689,"upstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016228_T006","Zm00001d016228",null,151137279,151142704,"-",20938,"downstream"]
["chr5","LNC_003901","XLOC_039632","lncRNA",151116128,151116340,"-","Zm00001d016229_T001","Zm00001d016229","sp|Q6PV67|SNZ_ARATH AP2-like ethylene-responsive transcription factor SNZ OS=Arabidopsis thaliana GN=SNZ PE=2 SV=1//1.41651e-07",151210417,151211022,"+",94076,"upstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T008","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680770,155697753,"-",40126,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T010","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680770,155697788,"-",40126,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T011","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680780,155697788,"-",40136,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T016","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680792,155697767,"-",40148,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T017","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680836,155683179,"-",40192,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T014","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680792,155697699,"-",40148,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016285_T001","Zm00001d016285","sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1//3.76907e-179",155592092,155595494,"-",44928,"upstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016288_T003","Zm00001d016288","sp|Q10F39|AGO11_ORYSJ Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2//9.71562e-36",155700571,155702544,"-",59927,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016287_T001","Zm00001d016287",null,155680965,155682213,"+",40321,"upstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016284_T001","Zm00001d016284","sp|Q9LUI1|LRX6_ARATH Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana GN=LRX6 PE=2 SV=1//2.12894e-54",155586800,155587668,"-",52754,"upstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016288_T002","Zm00001d016288","sp|Q10F39|AGO11_ORYSJ Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2//9.71562e-36",155699605,155704113,"-",58961,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T005","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680713,155697788,"-",40069,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T004","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680713,155697788,"-",40069,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T007","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680768,155697777,"-",40124,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T001","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680713,155697694,"-",40069,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016288_T001","Zm00001d016288","sp|Q10F39|AGO11_ORYSJ Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2//9.71562e-36",155699605,155704113,"-",58961,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T003","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680713,155697788,"-",40069,"downstream"]
["chr5","LNC_003906","XLOC_039666","lncRNA",155640423,155640643,"-","Zm00001d016286_T002","Zm00001d016286","sp|Q7U3W4|YBEY_SYNPX Endoribonuclease YbeY OS=Synechococcus sp. (strain WH8102) GN=ybeY PE=3 SV=1//4.39757e-19",155680713,155697788,"-",40069,"downstream"]
["chr5","LNC_003907","XLOC_039685","lncRNA",157122249,157122494,"-","Zm00001d016325_T001","Zm00001d016325",null,157204135,157205082,"-",81640,"downstream"]
["chr5","LNC_003907","XLOC_039685","lncRNA",157122249,157122494,"-","Zm00001d001669_T001","Zm00001d001669",null,157135876,157136336,"-",13381,"downstream"]
["chr5","LNC_003907","XLOC_039685","lncRNA",157122249,157122494,"-","Zm00001d016322_T001","Zm00001d016322",null,157111017,157120204,"+",2044,"downstream"]
["chr5","LNC_003904","XLOC_039648","lncRNA",153439707,153441238,"-","Zm00001d016252_T001","Zm00001d016252","sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1//1.26749e-70",153401527,153403274,"-",36432,"upstream"]
["chr5","LNC_003904","XLOC_039648","lncRNA",153439707,153441238,"-","Zm00001d016253_T001","Zm00001d016253","sp|Q8VWH2|HD3B_ORYSJ Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B PE=2 SV=1//1.9686e-75",153523441,153524604,"-",82202,"downstream"]
["chr5","LNC_003905","XLOC_039654","lncRNA",154091221,154091864,"-","Zm00001d016259_T001","Zm00001d016259","sp|Q8BGB2|TTC7A_MOUSE Tetratricopeptide repeat protein 7A OS=Mus musculus GN=Ttc7a PE=1 SV=1//3.7567e-15",154044507,154062350,"+",28870,"downstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016336_T001","Zm00001d016336",null,158072488,158072560,"+",39692,"downstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016341_T001","Zm00001d016341",null,158133318,158133776,"+",20790,"upstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016340_T004","Zm00001d016340","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.28289e-54",158132436,158133874,"-",19908,"downstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016340_T005","Zm00001d016340","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.28289e-54",158134673,158138901,"-",22145,"downstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016340_T001","Zm00001d016340","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.28289e-54",158127726,158138901,"-",15198,"downstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016340_T002","Zm00001d016340","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.28289e-54",158127726,158138901,"-",15198,"downstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016340_T003","Zm00001d016340","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.28289e-54",158127867,158138927,"-",15339,"downstream"]
["chr5","LNC_003908","XLOC_039713","lncRNA",158112253,158112527,"-","Zm00001d016337_T001","Zm00001d016337",null,158073238,158073310,"-",38942,"upstream"]
["chr5","LNC_003909","XLOC_039716","lncRNA",158355695,158355897,"-","Zm00001d016345_T001","Zm00001d016345",null,158415486,158416379,"+",59588,"upstream"]
["chr5","LNC_003909","XLOC_039716","lncRNA",158355695,158355897,"-","Zm00001d016342_T001","Zm00001d016342",null,158258923,158259528,"-",96166,"upstream"]
["chr5","LNC_003909","XLOC_039716","lncRNA",158355695,158355897,"-","Zm00001d016343_T001","Zm00001d016343","sp|Q9SYI3|AB5B_ARATH ABC transporter B family member 5 OS=Arabidopsis thaliana GN=ABCB5 PE=3 SV=1//1.3176e-17",158391441,158400908,"-",35543,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T005","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189856376,189860131,"+",16223,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T004","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189856343,189861921,"+",14433,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T007","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189860555,189862099,"+",14255,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T006","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189856945,189859904,"+",16450,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T001","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189856343,189861921,"+",14433,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T003","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189856343,189861921,"+",14433,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T002","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189856343,189861921,"+",14433,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031431_T001","Zm00001d031431",null,189876139,189876501,"-",-147,"antisense"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031429_T008","Zm00001d031429","sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1//7.5624e-36",189860654,189861805,"+",14549,"downstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031430_T003","Zm00001d031430",null,189862644,189867555,"-",8799,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031427_T001","Zm00001d031427","sp|Q9FZ59|PEPR2_ARATH Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1//5.79742e-72",189777969,189781413,"-",94941,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031428_T002","Zm00001d031428","sp|Q6UTZ2|MGDG2_ORYSJ Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2//0",189808691,189811383,"-",64971,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031430_T002","Zm00001d031430",null,189862644,189867514,"-",8840,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031430_T001","Zm00001d031430",null,189862644,189864050,"-",12304,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031428_T001","Zm00001d031428","sp|Q6UTZ2|MGDG2_ORYSJ Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2//0",189808671,189811445,"-",64909,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031430_T007","Zm00001d031430",null,189862709,189865455,"-",10899,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031430_T006","Zm00001d031430",null,189862676,189865913,"-",10441,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031430_T005","Zm00001d031430",null,189862668,189867440,"-",8914,"upstream"]
["chr1","LNC_000256","XLOC_002558","lncRNA",189876355,189876698,"+","Zm00001d031430_T004","Zm00001d031430",null,189862644,189867912,"-",8442,"upstream"]
["chr1","LNC_000109","XLOC_001424","lncRNA",77444522,77444885,"+","Zm00001d029577_T002","Zm00001d029577","sp|Q0D4Z6|GH38_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1//0",77398644,77401212,"+",43309,"downstream"]
["chr1","LNC_000109","XLOC_001424","lncRNA",77444522,77444885,"+","Zm00001d029577_T003","Zm00001d029577","sp|Q0D4Z6|GH38_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1//0",77398644,77401233,"+",43288,"downstream"]
["chr1","LNC_000109","XLOC_001424","lncRNA",77444522,77444885,"+","Zm00001d029578_T001","Zm00001d029578",null,77449634,77455875,"-",4748,"downstream"]
["chr1","LNC_000109","XLOC_001424","lncRNA",77444522,77444885,"+","Zm00001d029577_T001","Zm00001d029577","sp|Q0D4Z6|GH38_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1//0",77398644,77401189,"+",43332,"downstream"]
["chr1","LNC_000108","XLOC_001418","lncRNA",77040943,77041178,"+","Zm00001d022762_T001","Zm00001d022762",null,77001696,77002256,"-",38686,"upstream"]
["chr1","LNC_000108","XLOC_001418","lncRNA",77040943,77041178,"+","Zm00001d029575_T001","Zm00001d029575","sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B OS=Arabidopsis thaliana GN=SEC31B PE=1 SV=1//4.4875e-57",77122775,77123626,"+",81596,"upstream"]
["chr1","LNC_000108","XLOC_001418","lncRNA",77040943,77041178,"+","Zm00001d029574_T001","Zm00001d029574","sp|Q9FG37|GACP3_ARATH Gamma-tubulin complex component 3 OS=Arabidopsis thaliana GN=GCP3 PE=1 SV=1//4.41775e-35",77114982,77117031,"+",73803,"upstream"]
["chr1","LNC_000108","XLOC_001418","lncRNA",77040943,77041178,"+","Zm00001d029573_T001","Zm00001d029573","sp|Q75HC2|AGO7_ORYSJ Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2 SV=2//0",77065338,77070098,"+",24159,"upstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T010","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74098957,74101916,"+",22901,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029518_T001","Zm00001d029518",null,74201488,74202158,"-",75935,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029516_T002","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158771,74164282,"-",33218,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029516_T001","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158653,74164219,"-",33100,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029516_T004","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158881,74164166,"-",33328,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029516_T003","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158775,74164204,"-",33222,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T008","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095582,74098092,"+",26725,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T009","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74098955,74101916,"+",22901,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T006","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095552,74098089,"+",26728,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T007","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095558,74098261,"+",26556,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T004","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095499,74098080,"+",26737,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T005","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095547,74101975,"+",22842,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T002","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095473,74102001,"+",22816,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T003","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095496,74098080,"+",26737,"downstream"]
["chr1","LNC_000103","XLOC_001381","lncRNA",74124818,74125552,"+","Zm00001d029515_T001","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095473,74098201,"+",26616,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T010","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74098957,74101916,"+",21479,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029518_T001","Zm00001d029518",null,74201488,74202158,"-",77244,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029516_T002","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158771,74164282,"-",34527,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029516_T001","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158653,74164219,"-",34409,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029516_T004","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158881,74164166,"-",34637,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029516_T003","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158775,74164204,"-",34531,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T008","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095582,74098092,"+",25303,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T009","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74098955,74101916,"+",21479,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T006","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095552,74098089,"+",25306,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T007","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095558,74098261,"+",25134,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T004","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095499,74098080,"+",25315,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T005","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095547,74101975,"+",21420,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T002","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095473,74102001,"+",21394,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T003","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095496,74098080,"+",25315,"downstream"]
["chr1","LNC_000102","XLOC_001380","lncRNA",74123396,74124243,"+","Zm00001d029515_T001","Zm00001d029515","sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1//0",74095473,74098201,"+",25194,"downstream"]
["chr1","LNC_000101","XLOC_001375","lncRNA",73751137,73752493,"+","Zm00001d029510_T001","Zm00001d029510","sp|B9GCH9|UREA_ORYSJ Urease OS=Oryza sativa subsp. japonica GN=Os12g0234800 PE=3 SV=2//2.42437e-82",73770319,73772509,"-",17825,"downstream"]
["chr1","LNC_000101","XLOC_001375","lncRNA",73751137,73752493,"+","Zm00001d029507_T001","Zm00001d029507","sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1//2.47447e-10",73753509,73757673,"+",1015,"upstream"]
["chr1","LNC_000101","XLOC_001375","lncRNA",73751137,73752493,"+","Zm00001d029507_T003","Zm00001d029507","sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1//2.47447e-10",73753546,73757673,"+",1052,"upstream"]
["chr1","LNC_000101","XLOC_001375","lncRNA",73751137,73752493,"+","Zm00001d029507_T002","Zm00001d029507","sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1//2.47447e-10",73753509,73757673,"+",1015,"upstream"]
["chr1","LNC_000101","XLOC_001375","lncRNA",73751137,73752493,"+","Zm00001d029508_T001","Zm00001d029508","sp|Q6K5K2|Y2982_ORYSJ B3 domain-containing protein Os02g0598200 OS=Oryza sativa subsp. japonica GN=Os02g0598200 PE=2 SV=1//1.84712e-19",73763001,73764221,"-",10507,"downstream"]
["chr1","LNC_000101","XLOC_001375","lncRNA",73751137,73752493,"+","Zm00001d029506_T001","Zm00001d029506","sp|Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1//4.03124e-61",73706673,73707614,"-",43522,"upstream"]
["chr1","LNC_000100","XLOC_001374","lncRNA",73739378,73739604,"+","Zm00001d029510_T001","Zm00001d029510","sp|B9GCH9|UREA_ORYSJ Urease OS=Oryza sativa subsp. japonica GN=Os12g0234800 PE=3 SV=2//2.42437e-82",73770319,73772509,"-",30714,"downstream"]
["chr1","LNC_000100","XLOC_001374","lncRNA",73739378,73739604,"+","Zm00001d029507_T001","Zm00001d029507","sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1//2.47447e-10",73753509,73757673,"+",13904,"upstream"]
["chr1","LNC_000100","XLOC_001374","lncRNA",73739378,73739604,"+","Zm00001d029507_T003","Zm00001d029507","sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1//2.47447e-10",73753546,73757673,"+",13941,"upstream"]
["chr1","LNC_000100","XLOC_001374","lncRNA",73739378,73739604,"+","Zm00001d029507_T002","Zm00001d029507","sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1//2.47447e-10",73753509,73757673,"+",13904,"upstream"]
["chr1","LNC_000100","XLOC_001374","lncRNA",73739378,73739604,"+","Zm00001d029508_T001","Zm00001d029508","sp|Q6K5K2|Y2982_ORYSJ B3 domain-containing protein Os02g0598200 OS=Oryza sativa subsp. japonica GN=Os02g0598200 PE=2 SV=1//1.84712e-19",73763001,73764221,"-",23396,"downstream"]
["chr1","LNC_000100","XLOC_001374","lncRNA",73739378,73739604,"+","Zm00001d029506_T001","Zm00001d029506","sp|Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1//4.03124e-61",73706673,73707614,"-",31763,"upstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T001","Zm00001d029566",null,76607988,76611495,"-",4179,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T002","Zm00001d029566",null,76607988,76611495,"-",4179,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T003","Zm00001d029566",null,76607988,76612469,"-",4179,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T004","Zm00001d029566",null,76607988,76612585,"-",4179,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T005","Zm00001d029566",null,76608370,76612509,"-",4561,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T006","Zm00001d029566",null,76608375,76612585,"-",4566,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T007","Zm00001d029566",null,76608387,76611495,"-",4578,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T008","Zm00001d029566",null,76608387,76612469,"-",4578,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T009","Zm00001d029566",null,76608396,76612511,"-",4587,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d022760_T001","Zm00001d022760",null,76521443,76521692,"+",81197,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029567_T003","Zm00001d029567",null,76613992,76617712,"-",10183,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d022761_T001","Zm00001d022761",null,76611152,76612512,"-",7343,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029567_T001","Zm00001d029567",null,76613896,76617755,"-",10087,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T010","Zm00001d029566",null,76609630,76612529,"-",5821,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029567_T002","Zm00001d029567",null,76613899,76617703,"-",10090,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029566_T011","Zm00001d029566",null,76611152,76612512,"-",7343,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029564_T001","Zm00001d029564","sp|Q93WU7|WRK58_ARATH Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=2//1.45783e-14",76584638,76589606,"+",13283,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029568_T001","Zm00001d029568","sp|Q9FJ47|SAG12_ARATH Senescence-specific cysteine protease SAG12 OS=Arabidopsis thaliana GN=SAG12 PE=1 SV=1//4.2164e-73",76658393,76659887,"+",54584,"upstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029563_T002","Zm00001d029563","sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1//1.14378e-117",76521493,76526416,"+",76473,"downstream"]
["chr1","LNC_000107","XLOC_001410","lncRNA",76602890,76603808,"+","Zm00001d029563_T001","Zm00001d029563","sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1//1.14378e-117",76518613,76526323,"+",76566,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T001","Zm00001d029566",null,76607988,76611495,"-",9864,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T002","Zm00001d029566",null,76607988,76611495,"-",9864,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T003","Zm00001d029566",null,76607988,76612469,"-",9864,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T004","Zm00001d029566",null,76607988,76612585,"-",9864,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T005","Zm00001d029566",null,76608370,76612509,"-",10246,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T006","Zm00001d029566",null,76608375,76612585,"-",10251,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T007","Zm00001d029566",null,76608387,76611495,"-",10263,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T008","Zm00001d029566",null,76608387,76612469,"-",10263,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T009","Zm00001d029566",null,76608396,76612511,"-",10272,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d022760_T001","Zm00001d022760",null,76521443,76521692,"+",75149,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029567_T003","Zm00001d029567",null,76613992,76617712,"-",15868,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d022761_T001","Zm00001d022761",null,76611152,76612512,"-",13028,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029567_T001","Zm00001d029567",null,76613896,76617755,"-",15772,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T010","Zm00001d029566",null,76609630,76612529,"-",11506,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029567_T002","Zm00001d029567",null,76613899,76617703,"-",15775,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029566_T011","Zm00001d029566",null,76611152,76612512,"-",13028,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029564_T001","Zm00001d029564","sp|Q93WU7|WRK58_ARATH Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=2//1.45783e-14",76584638,76589606,"+",7235,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029568_T001","Zm00001d029568","sp|Q9FJ47|SAG12_ARATH Senescence-specific cysteine protease SAG12 OS=Arabidopsis thaliana GN=SAG12 PE=1 SV=1//4.2164e-73",76658393,76659887,"+",60269,"upstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029563_T002","Zm00001d029563","sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1//1.14378e-117",76521493,76526416,"+",70425,"downstream"]
["chr1","LNC_000106","XLOC_001409","lncRNA",76596842,76598123,"+","Zm00001d029563_T001","Zm00001d029563","sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1//1.14378e-117",76518613,76526323,"+",70518,"downstream"]
["chr1","LNC_000105","XLOC_001392","lncRNA",75183742,75183964,"+","Zm00001d029534_T002","Zm00001d029534","sp|Q1RMU4|ERLN2_BOVIN Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1//4.13111e-113",75283297,75289737,"-",99332,"downstream"]
["chr1","LNC_000105","XLOC_001392","lncRNA",75183742,75183964,"+","Zm00001d029534_T001","Zm00001d029534","sp|Q1RMU4|ERLN2_BOVIN Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1//4.13111e-113",75283292,75289737,"-",99327,"downstream"]
["chr1","LNC_000105","XLOC_001392","lncRNA",75183742,75183964,"+","Zm00001d029531_T001","Zm00001d029531",null,75094561,75099294,"-",84447,"upstream"]
["chr1","LNC_000105","XLOC_001392","lncRNA",75183742,75183964,"+","Zm00001d029531_T002","Zm00001d029531",null,75094561,75101160,"-",82581,"upstream"]
["chr1","LNC_000105","XLOC_001392","lncRNA",75183742,75183964,"+","Zm00001d029531_T003","Zm00001d029531",null,75096956,75101160,"-",82581,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029520_T002","Zm00001d029520","sp|A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1//1.31185e-57",74272463,74274286,"+",23977,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029520_T001","Zm00001d029520","sp|A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1//1.31185e-57",74272011,74274286,"+",23525,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029519_T001","Zm00001d029519","sp|Q7X7X4|C99A2_ORYSJ Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2//0",74249436,74251275,"+",950,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029516_T003","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158775,74164204,"-",84009,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029516_T002","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158771,74164282,"-",83931,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029516_T001","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158653,74164219,"-",83994,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029518_T001","Zm00001d029518",null,74201488,74202158,"-",46055,"upstream"]
["chr1","LNC_000104","XLOC_001382","lncRNA",74248214,74248485,"+","Zm00001d029516_T004","Zm00001d029516","sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1//0",74158881,74164166,"-",84047,"upstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038661_T002","Zm00001d038661","sp|P49971|SR541_SOLLC Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1//1.019e-44",161973344,161977653,"-",10840,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038661_T003","Zm00001d038661","sp|P49971|SR541_SOLLC Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1//1.019e-44",161973360,161977652,"-",10856,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038661_T001","Zm00001d038661","sp|P49971|SR541_SOLLC Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1//1.019e-44",161973344,161977653,"-",10840,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038657_T001","Zm00001d038657",null,161938045,161943212,"+",18635,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038658_T001","Zm00001d038658","sp|O22769|NDUV2_ARATH NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Arabidopsis thaliana GN=At4g02580 PE=2 SV=3//4.42848e-139",161945970,161951107,"+",10740,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038660_T005","Zm00001d038660","sp|Q8L548|TCX3_ARATH Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana GN=TCX3 PE=1 SV=1//8.48626e-33",161968087,161971256,"-",5583,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038660_T004","Zm00001d038660","sp|Q8L548|TCX3_ARATH Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana GN=TCX3 PE=1 SV=1//8.48626e-33",161968084,161971277,"-",5580,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038660_T006","Zm00001d038660","sp|Q8L548|TCX3_ARATH Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana GN=TCX3 PE=1 SV=1//8.48626e-33",161968087,161971256,"-",5583,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038660_T001","Zm00001d038660","sp|Q8L548|TCX3_ARATH Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana GN=TCX3 PE=1 SV=1//8.48626e-33",161968078,161971254,"-",5574,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038660_T003","Zm00001d038660","sp|Q8L548|TCX3_ARATH Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana GN=TCX3 PE=1 SV=1//8.48626e-33",161968078,161971256,"-",5574,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038660_T002","Zm00001d038660","sp|Q8L548|TCX3_ARATH Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana GN=TCX3 PE=1 SV=1//8.48626e-33",161968078,161971256,"-",5574,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T030","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922797,161936223,"+",25624,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T031","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922797,161936270,"+",25577,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T032","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922829,161936223,"+",25624,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T019","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922069,161936269,"+",25578,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T035","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922875,161936268,"+",25579,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T037","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161926111,161936269,"+",25578,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T012","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922046,161936225,"+",25622,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T013","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922053,161936196,"+",25651,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T017","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922069,161936210,"+",25637,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T014","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922058,161936225,"+",25622,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T015","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922062,161936268,"+",25579,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T041","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161929703,161936195,"+",25652,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T040","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161928843,161936268,"+",25579,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038656_T001","Zm00001d038656",null,161924907,161924980,"-",36867,"upstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038654_T001","Zm00001d038654",null,161898536,161899315,"+",62532,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T005","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922006,161936226,"+",25621,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T004","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161921947,161936269,"+",25578,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038657_T005","Zm00001d038657",null,161939177,161943212,"+",18635,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T006","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922017,161936210,"+",25637,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T001","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161921883,161936224,"+",25623,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T026","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922797,161936210,"+",25637,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T003","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161921883,161936270,"+",25577,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T002","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161921883,161936270,"+",25577,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038652_T003","Zm00001d038652","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//7.8397e-54",161892117,161896560,"+",65287,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T044","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161933940,161936225,"+",25622,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038653_T002","Zm00001d038653","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//3.98983e-27",161892179,161896077,"+",65770,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038653_T001","Zm00001d038653","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//3.98983e-27",161892150,161896354,"+",65493,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T018","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161922069,161936224,"+",25623,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038655_T039","Zm00001d038655","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//4.38738e-09",161927768,161936224,"+",25623,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038657_T003","Zm00001d038657",null,161938045,161943212,"+",18635,"downstream"]
["chr6","LNC_004275","XLOC_043211","lncRNA",161961848,161962503,"+","Zm00001d038657_T002","Zm00001d038657",null,161938045,161943212,"+",18635,"downstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T013","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622805,161635694,"+",63924,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T020","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161625845,161636038,"+",66964,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038642_T001","Zm00001d038642","sp|Q8L730|SDI2_ARATH Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis thaliana GN=At1g04770 PE=2 SV=1//4.13538e-120",161549380,161551931,"+",6605,"downstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T023","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161628256,161636006,"+",69375,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038640_T001","Zm00001d038640","sp|P43214|MPAP2_PHLPR Pollen allergen Phl p 2 OS=Phleum pratense GN=PHLPII PE=1 SV=1//1.23663e-14",161505645,161506007,"+",52529,"downstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038645_T001","Zm00001d038645","sp|Q9FJ45|GDL83_ARATH GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana GN=At5g45910 PE=2 SV=1//7.33485e-66",161639242,161641010,"+",80361,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T022","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161628135,161635694,"+",69254,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T009","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622761,161635694,"+",63880,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T008","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622758,161635694,"+",63877,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T003","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622743,161636125,"+",63862,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T002","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622743,161636125,"+",63862,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T001","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622743,161636125,"+",63862,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T026","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161629500,161635988,"+",70619,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T007","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622752,161635694,"+",63871,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T006","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622752,161635694,"+",63871,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T005","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622743,161636125,"+",63862,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T004","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622743,161636125,"+",63862,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d001469_T001","Zm00001d001469",null,161633410,161636031,"+",74529,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T018","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161625443,161636017,"+",66562,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T019","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161625575,161629236,"+",66694,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038641_T001","Zm00001d038641",null,161517683,161518361,"-",40175,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T011","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622790,161636007,"+",63909,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038643_T001","Zm00001d038643",null,161552342,161553494,"-",5042,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T014","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161622805,161635694,"+",63924,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T016","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161625440,161636125,"+",66559,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T024","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161628960,161635694,"+",70079,"upstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038646_T001","Zm00001d038646","sp|Q9AWM9|RPF2_ORYSJ Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica GN=Os01g0513800 PE=2 SV=1//0",161644067,161647774,"-",85186,"downstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038646_T003","Zm00001d038646","sp|Q9AWM9|RPF2_ORYSJ Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica GN=Os01g0513800 PE=2 SV=1//0",161644268,161647641,"-",85387,"downstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038646_T002","Zm00001d038646","sp|Q9AWM9|RPF2_ORYSJ Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica GN=Os01g0513800 PE=2 SV=1//0",161644067,161647957,"-",85186,"downstream"]
["chr6","LNC_004274","XLOC_043198","lncRNA",161558537,161558880,"+","Zm00001d038644_T027","Zm00001d038644","sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana GN=RDM3 PE=1 SV=1//1.43204e-43",161633410,161636031,"+",74529,"upstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003333_T002","Zm00001d003333",null,40554847,40561652,"+",63682,"downstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003333_T003","Zm00001d003333",null,40554847,40561652,"+",63682,"downstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003333_T005","Zm00001d003333",null,40554878,40561505,"+",63829,"downstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003333_T008","Zm00001d003333",null,40554910,40561505,"+",63829,"downstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003333_T010","Zm00001d003333",null,40554955,40561508,"+",63826,"downstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003334_T003","Zm00001d003334",null,40565943,40567867,"+",57467,"downstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003335_T001","Zm00001d003335","sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1//4.55275e-08",40605988,40607442,"-",17892,"upstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003334_T001","Zm00001d003334",null,40564802,40567941,"+",57393,"downstream"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003336_T002","Zm00001d003336",null,40620430,40625476,"-",-142,"antisense"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003336_T001","Zm00001d003336",null,40620430,40625476,"-",-142,"antisense"]
["chr2","LNC_001430","XLOC_014389","lncRNA",40625335,40625693,"+","Zm00001d003334_T002","Zm00001d003334",null,40564810,40567943,"+",57391,"downstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033803_T001","Zm00001d033803","sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1//1.34075e-99",274190393,274191331,"-",2816,"downstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033804_T001","Zm00001d033804","sp|P0C0L1|APX6_ORYSJ Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1//2.0681e-46",274194078,274205476,"+",6501,"upstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033800_T002","Zm00001d033800","sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana GN=NPF8.3 PE=1 SV=1//1.38243e-114",274110086,274115179,"-",71930,"upstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033800_T001","Zm00001d033800","sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana GN=NPF8.3 PE=1 SV=1//1.38243e-114",274110065,274115060,"-",72049,"upstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033805_T001","Zm00001d033805","sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2//0",274230300,274242798,"+",42723,"upstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033805_T002","Zm00001d033805","sp|Q42521|DCE1_ARATH Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2//0",274241546,274242759,"+",53969,"upstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033802_T001","Zm00001d033802",null,274188856,274189557,"+",1279,"upstream"]
["chr1","LNC_000818","XLOC_008474","lncRNA",274187110,274187576,"-","Zm00001d033806_T001","Zm00001d033806","sp|A0A078CGE6|M3KE1_BRANA MAP3K epsilon protein kinase 1 OS=Brassica napus GN=M3KE1 PE=1 SV=1//3.90592e-40",274286604,274287932,"+",99027,"upstream"]
["chr2","LNC_001432","XLOC_014396","lncRNA",40871901,40872158,"+","Zm00001d003341_T001","Zm00001d003341",null,40886744,40888162,"-",14585,"downstream"]
["chr2","LNC_001432","XLOC_014396","lncRNA",40871901,40872158,"+","Zm00001d003342_T001","Zm00001d003342","sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1//8.1521e-10",40909561,40911078,"-",37402,"downstream"]
["chr2","LNC_001432","XLOC_014396","lncRNA",40871901,40872158,"+","Zm00001d003343_T001","Zm00001d003343","sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1//4.09454e-15",40922658,40925501,"+",50499,"upstream"]
["chr2","LNC_001432","XLOC_014396","lncRNA",40871901,40872158,"+","Zm00001d003343_T002","Zm00001d003343","sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1//4.09454e-15",40923086,40925501,"+",50927,"upstream"]
["chr2","LNC_001433","XLOC_014406","lncRNA",41407036,41407426,"+","Zm00001d003354_T002","Zm00001d003354","sp|Q8S628|AB51G_ORYSJ ABC transporter G family member 51 OS=Oryza sativa subsp. japonica GN=ABCG51 PE=3 SV=1//0",41358363,41370652,"+",36383,"downstream"]
["chr2","LNC_001433","XLOC_014406","lncRNA",41407036,41407426,"+","Zm00001d003354_T001","Zm00001d003354","sp|Q8S628|AB51G_ORYSJ ABC transporter G family member 51 OS=Oryza sativa subsp. japonica GN=ABCG51 PE=3 SV=1//0",41358363,41370652,"+",36383,"downstream"]
["chr2","LNC_001433","XLOC_014406","lncRNA",41407036,41407426,"+","Zm00001d003357_T001","Zm00001d003357",null,41461759,41462169,"+",54332,"upstream"]
["chr2","LNC_001433","XLOC_014406","lncRNA",41407036,41407426,"+","Zm00001d003356_T001","Zm00001d003356",null,41420700,41421676,"+",13273,"upstream"]
["chr2","LNC_001433","XLOC_014406","lncRNA",41407036,41407426,"+","Zm00001d003355_T001","Zm00001d003355",null,41415358,41415827,"+",7931,"upstream"]
["chr2","LNC_001433","XLOC_014406","lncRNA",41407036,41407426,"+","Zm00001d003356_T002","Zm00001d003356",null,41420700,41432968,"+",13273,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003363_T001","Zm00001d003363",null,41640053,41640900,"+",70855,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003359_T001","Zm00001d003359","sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3 SV=1//1.02776e-06",41555229,41556283,"-",10343,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T001","Zm00001d003367",null,41654511,41666461,"+",85313,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003364_T001","Zm00001d003364",null,41645508,41646269,"+",76310,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T003","Zm00001d003367",null,41655315,41666461,"+",86117,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T002","Zm00001d003367",null,41654574,41666461,"+",85376,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T004","Zm00001d003367",null,41664879,41666461,"+",95681,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003358_T001","Zm00001d003358",null,41528347,41529687,"+",36939,"downstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003365_T001","Zm00001d003365",null,41647913,41648861,"+",78715,"upstream"]
["chr2","LNC_001434","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003366_T001","Zm00001d003366",null,41650584,41653382,"+",81386,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003363_T001","Zm00001d003363",null,41640053,41640900,"+",70855,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003359_T001","Zm00001d003359","sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3 SV=1//1.02776e-06",41555229,41556283,"-",10343,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T001","Zm00001d003367",null,41654511,41666461,"+",85313,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003364_T001","Zm00001d003364",null,41645508,41646269,"+",76310,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T003","Zm00001d003367",null,41655315,41666461,"+",86117,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T002","Zm00001d003367",null,41654574,41666461,"+",85376,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003367_T004","Zm00001d003367",null,41664879,41666461,"+",95681,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003358_T001","Zm00001d003358",null,41528347,41529687,"+",36939,"downstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003365_T001","Zm00001d003365",null,41647913,41648861,"+",78715,"upstream"]
["chr2","LNC_001435","XLOC_014412","lncRNA",41566627,41569197,"+","Zm00001d003366_T001","Zm00001d003366",null,41650584,41653382,"+",81386,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003363_T001","Zm00001d003363",null,41640053,41640900,"+",64113,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003359_T001","Zm00001d003359","sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3 SV=1//1.02776e-06",41555229,41556283,"-",12977,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003367_T001","Zm00001d003367",null,41654511,41666461,"+",78571,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003364_T001","Zm00001d003364",null,41645508,41646269,"+",69568,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003367_T003","Zm00001d003367",null,41655315,41666461,"+",79375,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003367_T002","Zm00001d003367",null,41654574,41666461,"+",78634,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003367_T004","Zm00001d003367",null,41664879,41666461,"+",88939,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003358_T001","Zm00001d003358",null,41528347,41529687,"+",39573,"downstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003365_T001","Zm00001d003365",null,41647913,41648861,"+",71973,"upstream"]
["chr2","LNC_001436","XLOC_014415","lncRNA",41569261,41575939,"+","Zm00001d003366_T001","Zm00001d003366",null,41650584,41653382,"+",74644,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003363_T001","Zm00001d003363",null,41640053,41640900,"+",64113,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003359_T001","Zm00001d003359","sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3 SV=1//1.02776e-06",41555229,41556283,"-",15245,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003367_T001","Zm00001d003367",null,41654511,41666461,"+",78571,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003364_T001","Zm00001d003364",null,41645508,41646269,"+",69568,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003367_T003","Zm00001d003367",null,41655315,41666461,"+",79375,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003367_T002","Zm00001d003367",null,41654574,41666461,"+",78634,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003367_T004","Zm00001d003367",null,41664879,41666461,"+",88939,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003358_T001","Zm00001d003358",null,41528347,41529687,"+",41841,"downstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003365_T001","Zm00001d003365",null,41647913,41648861,"+",71973,"upstream"]
["chr2","LNC_001437","XLOC_014415","lncRNA",41571529,41575939,"+","Zm00001d003366_T001","Zm00001d003366",null,41650584,41653382,"+",74644,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T011","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673862,269682546,"-",14139,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T010","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673846,269682620,"-",14123,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T013","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269674587,269682670,"-",14864,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T012","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673901,269682628,"-",14178,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033650_T001","Zm00001d033650","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.9727e-65",269669159,269672469,"-",9436,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033650_T002","Zm00001d033650","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.9727e-65",269669160,269672469,"-",9437,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033648_T001","Zm00001d033648","sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1//2.04057e-62",269566343,269572708,"+",86774,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033648_T002","Zm00001d033648","sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1//2.04057e-62",269566387,269572708,"+",86774,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033648_T003","Zm00001d033648","sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1//2.04057e-62",269566407,269572640,"+",86842,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T009","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615992,269617298,"-",42184,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T008","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615199,269618712,"-",40770,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T008","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673793,269682674,"-",14070,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T003","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615075,269618712,"-",40770,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T002","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615026,269618990,"-",40492,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T001","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615026,269618990,"-",40492,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T009","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673815,269675107,"-",14092,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T007","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615173,269618717,"-",40765,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T006","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615172,269618717,"-",40765,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T005","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615108,269618693,"-",40789,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033649_T004","Zm00001d033649","sp|Q75I93|BGL07_ORYSJ Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1//7.11403e-108",269615076,269618712,"-",40770,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033653_T001","Zm00001d033653","sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2//2.69956e-07",269692437,269694571,"+",32714,"upstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T006","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673793,269682674,"-",14070,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T007","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673793,269682674,"-",14070,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T004","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673793,269676630,"-",14070,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T005","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673793,269682674,"-",14070,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T009","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269557258,269564146,"+",95336,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T008","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556385,269564147,"+",95335,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T001","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673768,269682600,"-",14045,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T005","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556362,269564100,"+",95382,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T004","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556321,269564180,"+",95302,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T007","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556369,269564145,"+",95337,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T006","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556368,269564173,"+",95309,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T001","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556220,269564208,"+",95274,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T003","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556300,269564169,"+",95313,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033647_T002","Zm00001d033647","sp|Q9SR15|SYWC_ARATH Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At3g04600 PE=2 SV=1//7.17103e-26",269556261,269564100,"+",95382,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033652_T002","Zm00001d033652","sp|C0LGT1|Y5129_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1//0",269683309,269688890,"-",23586,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033652_T001","Zm00001d033652","sp|C0LGT1|Y5129_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1//0",269683309,269688864,"-",23586,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T002","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673793,269676289,"-",14070,"downstream"]
["chr1","LNC_000811","XLOC_008394","lncRNA",269659483,269659722,"-","Zm00001d033651_T003","Zm00001d033651","sp|Q75I94|BGL08_ORYSJ Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1//1.83521e-16",269673793,269676630,"-",14070,"downstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033531_T001","Zm00001d033531",null,265972247,265972528,"-",49813,"upstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033532_T001","Zm00001d033532",null,266017391,266020729,"-",1612,"upstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033533_T002","Zm00001d033533","sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1//3.43404e-15",266045970,266061318,"-",22968,"downstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033533_T001","Zm00001d033533","sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1//3.43404e-15",266045970,266060804,"-",22968,"downstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033533_T004","Zm00001d033533","sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1//3.43404e-15",266047048,266061212,"-",24046,"downstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033533_T007","Zm00001d033533","sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1//3.43404e-15",266048077,266061213,"-",25075,"downstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033533_T005","Zm00001d033533","sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1//3.43404e-15",266047048,266061318,"-",24046,"downstream"]
["chr1","LNC_000810","XLOC_008332","lncRNA",266022342,266023001,"-","Zm00001d033530_T001","Zm00001d033530",null,265934294,265934575,"-",87766,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T007","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719247,270726826,"-",74553,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T006","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719245,270726818,"-",74561,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T005","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719238,270726813,"-",74566,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T004","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719181,270726935,"-",74444,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T003","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719181,270726935,"-",74444,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T002","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719181,270726935,"-",74444,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T001","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719181,270726935,"-",74444,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033676_T001","Zm00001d033676",null,270865267,270865339,"+",63363,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033677_T001","Zm00001d033677",null,270866104,270866176,"-",64200,"downstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T009","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719253,270726820,"-",74559,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T008","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719253,270726820,"-",74559,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033678_T001","Zm00001d033678",null,270872513,270872585,"+",70609,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033675_T001","Zm00001d033675","sp|O29470|Y788_ARCFU Uncharacterized transporter AF_0788 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0788 PE=3 SV=1//2.82725e-11",270856580,270859741,"+",54676,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033679_T001","Zm00001d033679",null,270873180,270873252,"-",71276,"downstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T010","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719261,270723340,"-",78039,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T012","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719267,270726722,"-",74657,"upstream"]
["chr1","LNC_000813","XLOC_008407","lncRNA",270801380,270801903,"-","Zm00001d033674_T011","Zm00001d033674","sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2//6.31791e-07",270719265,270726826,"-",74553,"upstream"]
["chr1","LNC_000812","XLOC_008405","lncRNA",270386785,270387023,"-","Zm00001d033672_T001","Zm00001d033672","sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=topA PE=3 SV=1//2.7906e-11",270396058,270399665,"+",9034,"upstream"]
["chr1","LNC_000812","XLOC_008405","lncRNA",270386785,270387023,"-","Zm00001d033671_T001","Zm00001d033671","sp|Q0V865|FAFL_ARATH Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1//1.1157e-06",270391709,270392980,"+",4685,"upstream"]
["chr1","LNC_000812","XLOC_008405","lncRNA",270386785,270387023,"-","Zm00001d033672_T002","Zm00001d033672","sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=topA PE=3 SV=1//2.7906e-11",270396058,270399665,"+",9034,"upstream"]
["chr1","LNC_000815","XLOC_008430","lncRNA",272161459,272161723,"-","Zm00001d033719_T001","Zm00001d033719","sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2//6.19178e-46",272190270,272192279,"+",28546,"upstream"]
["chr1","LNC_000815","XLOC_008430","lncRNA",272161459,272161723,"-","Zm00001d033721_T001","Zm00001d033721","sp|Q9LHF1|LRX4_ARATH Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=LRX4 PE=2 SV=1//6.18432e-91",272218064,272219057,"+",56340,"upstream"]
["chr1","LNC_000815","XLOC_008430","lncRNA",272161459,272161723,"-","Zm00001d033722_T001","Zm00001d033722","sp|Q9LHF1|LRX4_ARATH Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=LRX4 PE=2 SV=1//3.05675e-84",272218077,272219421,"-",56353,"downstream"]
["chr1","LNC_000815","XLOC_008430","lncRNA",272161459,272161723,"-","Zm00001d033717_T001","Zm00001d033717",null,272123492,272125627,"-",35831,"upstream"]
["chr1","LNC_000815","XLOC_008430","lncRNA",272161459,272161723,"-","Zm00001d033718_T001","Zm00001d033718","sp|Q8L7U7|ACDH_ARATH ACD11 homolog protein OS=Arabidopsis thaliana GN=At4g39670 PE=2 SV=1//5.02078e-72",272130665,272132998,"-",28460,"upstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033713_T002","Zm00001d033713","sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3//1.19725e-07",271986535,271991029,"+",22877,"downstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033713_T001","Zm00001d033713","sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3//1.19725e-07",271988760,271991029,"+",22877,"downstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033714_T001","Zm00001d033714","sp|Q54I39|IST1L_DICDI IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1//1.65955e-15",271994541,271996227,"+",17679,"downstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033709_T001","Zm00001d033709","sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2//4.09415e-32",271942636,271943635,"-",70271,"upstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033710_T001","Zm00001d033710","sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1//3.37494e-44",271948830,271949783,"-",64123,"upstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033711_T001","Zm00001d033711","sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1//2.93599e-42",271957661,271958619,"-",55287,"upstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033712_T001","Zm00001d033712","sp|Q402F3|TOM3_TOBAC Tobamovirus multiplication protein 3 OS=Nicotiana tabacum GN=TOM3 PE=1 SV=1//2.78498e-44",271987272,271987875,"+",26031,"downstream"]
["chr1","LNC_000814","XLOC_008427","lncRNA",272013907,272014134,"-","Zm00001d033716_T001","Zm00001d033716","sp|Q9FX64|HOP2_ARATH Homologous-pairing protein 2 homolog OS=Arabidopsis thaliana GN=HOP2 PE=1 SV=1//3.49054e-95",272005935,272007220,"-",6686,"upstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033765_T001","Zm00001d033765","sp|Q9LPQ3|M2K7_ARATH Mitogen-activated protein kinase kinase 7 OS=Arabidopsis thaliana GN=MKK7 PE=1 SV=1//2.12615e-75",273052013,273053002,"+",20588,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T007","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997608,273005246,"+",68344,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T006","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997608,273005236,"+",68354,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T001","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997605,273005147,"+",68443,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033767_T001","Zm00001d033767","sp|O48557|RL17_MAIZE 60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1//3.42515e-110",273087151,273089800,"-",13242,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033767_T002","Zm00001d033767","sp|O48557|RL17_MAIZE 60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1//3.42515e-110",273087151,273089867,"-",13242,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033767_T003","Zm00001d033767","sp|O48557|RL17_MAIZE 60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1//3.42515e-110",273087355,273089712,"-",13446,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T003","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997607,273005246,"+",68344,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033769_T001","Zm00001d033769","sp|Q7XP59|GLR31_ORYSJ Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1//0",273099857,273102264,"-",25948,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033770_T001","Zm00001d033770",null,273104285,273108186,"-",30376,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033768_T001","Zm00001d033768",null,273093684,273094220,"-",19775,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T009","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997658,273003550,"+",70040,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T008","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997619,273005116,"+",68474,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T005","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997608,273005231,"+",68359,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T004","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997608,273005118,"+",68472,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033766_T005","Zm00001d033766","sp|Q9LFD5|BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=1//3.2175e-71",273078129,273081073,"-",4220,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033766_T004","Zm00001d033766","sp|Q9LFD5|BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=1//3.2175e-71",273077980,273082630,"-",4071,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033766_T003","Zm00001d033766","sp|Q9LFD5|BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=1//3.2175e-71",273077966,273082841,"-",4057,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033766_T002","Zm00001d033766","sp|Q9LFD5|BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=1//3.2175e-71",273077966,273082841,"-",4057,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033766_T001","Zm00001d033766","sp|Q9LFD5|BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=1//3.2175e-71",273077945,273082636,"-",4036,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T002","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997607,273005231,"+",68359,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T016","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997697,273005246,"+",68344,"downstream"]
["chr1","LNC_000817","XLOC_008450","lncRNA",273073591,273073908,"-","Zm00001d033764_T018","Zm00001d033764","sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=2 SV=1//0",272997824,273005196,"+",68394,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033749_T001","Zm00001d033749","sp|Q8VZE4|PP299_ARATH Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1//0",272717186,272719728,"+",23090,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033748_T001","Zm00001d033748","sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2//3.97068e-174",272708766,272711777,"-",14670,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d022979_T001","Zm00001d022979",null,272713050,272713478,"+",18954,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033744_T001","Zm00001d033744","sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1//5.42713e-74",272666382,272672688,"+",20970,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033741_T001","Zm00001d033741","sp|C4K3I5|DNAJ_HAMD5 Chaperone protein DnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1//4.51602e-25",272606017,272615128,"+",78530,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033741_T002","Zm00001d033741","sp|C4K3I5|DNAJ_HAMD5 Chaperone protein DnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1//4.51602e-25",272606017,272615128,"+",78530,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033740_T001","Zm00001d033740",null,272604808,272605787,"-",87871,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033742_T001","Zm00001d033742","sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1//8.70818e-29",272623996,272631500,"+",62158,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033750_T002","Zm00001d033750","sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1//0",272770296,272780685,"+",76200,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033750_T003","Zm00001d033750","sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1//0",272770303,272780665,"+",76207,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033750_T001","Zm00001d033750","sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1//0",272770260,272780677,"+",76164,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033750_T004","Zm00001d033750","sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1//0",272770306,272780596,"+",76210,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033750_T005","Zm00001d033750","sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1//0",272772409,272780685,"+",78313,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033746_T005","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",272699616,272704266,"+",5520,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033746_T004","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",272699616,272704224,"+",5520,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033746_T007","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",272703538,272704175,"+",9442,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033746_T006","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",272702733,272704306,"+",8637,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033746_T001","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",272697870,272704330,"+",3774,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033746_T003","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",272697870,272704606,"+",3774,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033746_T002","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",272697870,272704606,"+",3774,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033738_T004","Zm00001d033738","sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=2//9.65119e-09",272593366,272594773,"+",98885,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033738_T001","Zm00001d033738","sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=2//9.65119e-09",272592762,272594826,"+",98832,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033738_T002","Zm00001d033738","sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=2//9.65119e-09",272592762,272594932,"+",98726,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033738_T003","Zm00001d033738","sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=2//9.65119e-09",272592762,272594932,"+",98726,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033745_T001","Zm00001d033745","sp|Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=2 SV=1//2.36801e-172",272677505,272681013,"-",12645,"upstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033747_T002","Zm00001d033747","sp|P38560|GLNA2_MAIZE Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1//1.98713e-14",272704780,272706883,"-",10684,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033747_T003","Zm00001d033747","sp|P38560|GLNA2_MAIZE Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1//1.98713e-14",272704850,272707955,"-",10754,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033747_T001","Zm00001d033747","sp|P38560|GLNA2_MAIZE Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1//1.98713e-14",272704775,272707957,"-",10679,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033747_T004","Zm00001d033747","sp|P38560|GLNA2_MAIZE Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1//1.98713e-14",272704869,272707951,"-",10773,"downstream"]
["chr1","LNC_000816","XLOC_008445","lncRNA",272693659,272694095,"-","Zm00001d033747_T005","Zm00001d033747","sp|P38560|GLNA2_MAIZE Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1//1.98713e-14",272704869,272707957,"-",10773,"downstream"]
["chr9","LNC_006112","XLOC_060721","lncRNA",125248714,125249379,"-","Zm00001d047275_T001","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125243894,"-",4819,"upstream"]
["chr9","LNC_006112","XLOC_060721","lncRNA",125248714,125249379,"-","Zm00001d047276_T001","Zm00001d047276","sp|Q10JL1|COBL5_ORYSJ COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1//0",125270207,125272239,"+",20827,"upstream"]
["chr9","LNC_006112","XLOC_060721","lncRNA",125248714,125249379,"-","Zm00001d047275_T003","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125245017,"-",3696,"upstream"]
["chr9","LNC_006112","XLOC_060721","lncRNA",125248714,125249379,"-","Zm00001d047275_T002","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125244799,"-",3914,"upstream"]
["chr9","LNC_006112","XLOC_060721","lncRNA",125248714,125249379,"-","Zm00001d047275_T004","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125243988,125245017,"-",3696,"upstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047281_T001","Zm00001d047281","sp|Q9SVH3|PP328_ARATH Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana GN=At4g20740 PE=3 SV=1//2.75367e-11",125402411,125403326,"+",69888,"upstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T001","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125243894,"-",86359,"upstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047276_T001","Zm00001d047276","sp|Q10JL1|COBL5_ORYSJ COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1//0",125270207,125272239,"+",58014,"downstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T003","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125245017,"-",85236,"upstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T002","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125244799,"-",85454,"upstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T004","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125243988,125245017,"-",85236,"upstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047278_T001","Zm00001d047278","sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1//6.74326e-22",125362228,125362929,"-",29705,"downstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047280_T001","Zm00001d047280",null,125381209,125381287,"+",48686,"upstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047279_T001","Zm00001d047279","sp|Q9LMX7|C78A5_ARATH Cytochrome P450 78A5 OS=Arabidopsis thaliana GN=CYP78A5 PE=2 SV=1//6.88594e-15",125381053,125382929,"-",48530,"downstream"]
["chr9","LNC_006113","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047279_T002","Zm00001d047279","sp|Q9LMX7|C78A5_ARATH Cytochrome P450 78A5 OS=Arabidopsis thaliana GN=CYP78A5 PE=2 SV=1//6.88594e-15",125381375,125382877,"-",48852,"downstream"]
["chr9","LNC_006110","XLOC_060684","lncRNA",122942399,122942741,"-","Zm00001d047224_T003","Zm00001d047224","sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1//0",122891336,122920999,"-",21399,"upstream"]
["chr9","LNC_006110","XLOC_060684","lncRNA",122942399,122942741,"-","Zm00001d047224_T002","Zm00001d047224","sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1//0",122891336,122920090,"-",22308,"upstream"]
["chr9","LNC_006110","XLOC_060684","lncRNA",122942399,122942741,"-","Zm00001d047224_T001","Zm00001d047224","sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1//0",122891336,122919814,"-",22584,"upstream"]
["chr9","LNC_006110","XLOC_060684","lncRNA",122942399,122942741,"-","Zm00001d047224_T005","Zm00001d047224","sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1//0",122891336,122920999,"-",21399,"upstream"]
["chr9","LNC_006110","XLOC_060684","lncRNA",122942399,122942741,"-","Zm00001d047224_T004","Zm00001d047224","sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1//0",122891336,122920999,"-",21399,"upstream"]
["chr9","LNC_006110","XLOC_060684","lncRNA",122942399,122942741,"-","Zm00001d047226_T001","Zm00001d047226",null,122939298,122940717,"-",1681,"upstream"]
["chr9","LNC_006110","XLOC_060684","lncRNA",122942399,122942741,"-","Zm00001d047225_T001","Zm00001d047225",null,122895946,122896017,"+",46381,"downstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T003","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108202268,108211849,"+",27084,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T002","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108202268,108211849,"+",27084,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T001","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108202268,108211830,"+",27084,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036982_T005","Zm00001d036982","sp|Q9SLD2|DGAT1_ARATH Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2//2.41366e-49",108212499,108219350,"-",37315,"downstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T007","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108202273,108211764,"+",27089,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T006","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108202268,108211871,"+",27084,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T005","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108202268,108211849,"+",27084,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T004","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108202268,108211849,"+",27084,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T009","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108204290,108211829,"+",29106,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T008","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108203850,108211803,"+",28666,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036982_T004","Zm00001d036982","sp|Q9SLD2|DGAT1_ARATH Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2//2.41366e-49",108212482,108219350,"-",37298,"downstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T012","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108207242,108211849,"+",32058,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036978_T001","Zm00001d036978","sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1//3.62938e-68",108109102,108113917,"-",60464,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036977_T001","Zm00001d036977","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//0",108070822,108076516,"-",97865,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036982_T006","Zm00001d036982","sp|Q9SLD2|DGAT1_ARATH Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2//2.41366e-49",108212506,108219308,"-",37322,"downstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d001410_T001","Zm00001d001410",null,108221500,108222034,"+",46316,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T011","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108206341,108211833,"+",31157,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036981_T010","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108205736,108211761,"+",30552,"upstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036982_T002","Zm00001d036982","sp|Q9SLD2|DGAT1_ARATH Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2//2.41366e-49",108212462,108219350,"-",37278,"downstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036982_T001","Zm00001d036982","sp|Q9SLD2|DGAT1_ARATH Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2//2.41366e-49",108212462,108218971,"-",37278,"downstream"]
["chr6","LNC_004482","XLOC_044827","lncRNA",108174382,108175183,"-","Zm00001d036982_T003","Zm00001d036982","sp|Q9SLD2|DGAT1_ARATH Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2//2.41366e-49",108212462,108219350,"-",37278,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T002","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108327528,108338061,"+",59691,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T003","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108327646,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T001","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108327528,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T007","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108329556,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T005","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108327658,108338061,"+",59691,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T009","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108329888,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036987_T001","Zm00001d036987","sp|Q8W1Y3|KP1_ARATH Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2//1.31089e-16",108388200,108395354,"-",2398,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036990_T001","Zm00001d036990","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//3.06521e-26",108474391,108475155,"+",76429,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036990_T002","Zm00001d036990","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//3.06521e-26",108474391,108475244,"+",76429,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036988_T001","Zm00001d036988",null,108404948,108409071,"-",6986,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036989_T001","Zm00001d036989",null,108445740,108450130,"+",47778,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036991_T001","Zm00001d036991",null,108476790,108477476,"+",78828,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T028","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108335920,108337856,"+",59896,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T021","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108331289,108337960,"+",59792,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T022","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108332262,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T023","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108332381,108337992,"+",59760,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T027","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108332549,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036985_T001","Zm00001d036985","sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=2//1.10456e-65",108317523,108319096,"-",78656,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036983_T001","Zm00001d036983",null,108299528,108303263,"-",94489,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036984_T001","Zm00001d036984","sp|Q42400|AAP1_ARATH Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1//0",108314918,108317096,"-",80656,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036984_T002","Zm00001d036984","sp|Q42400|AAP1_ARATH Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1//0",108315048,108316992,"-",80760,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036984_T003","Zm00001d036984","sp|Q42400|AAP1_ARATH Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1//0",108315077,108317030,"-",80722,"upstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d001411_T001","Zm00001d001411",null,108403800,108405591,"-",5838,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T018","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108331289,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T015","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108330739,108337962,"+",59790,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T017","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108331287,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T016","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108330896,108337934,"+",59818,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T010","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108330106,108337927,"+",59825,"downstream"]
["chr6","LNC_004483","XLOC_044833","lncRNA",108397753,108397961,"-","Zm00001d036986_T012","Zm00001d036986","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",108330491,108337963,"+",59789,"downstream"]
["chr6","LNC_004480","XLOC_044804","lncRNA",106496421,106496723,"-","Zm00001d036919_T018","Zm00001d036919","sp|Q9SJE2|FATB_ARATH Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana GN=FATB PE=1 SV=1//1.08876e-152",106395247,106396953,"-",99467,"upstream"]
["chr6","LNC_004480","XLOC_044804","lncRNA",106496421,106496723,"-","Zm00001d036919_T005","Zm00001d036919","sp|Q9SJE2|FATB_ARATH Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana GN=FATB PE=1 SV=1//1.08876e-152",106386865,106396953,"-",99467,"upstream"]
["chr6","LNC_004480","XLOC_044804","lncRNA",106496421,106496723,"-","Zm00001d036922_T001","Zm00001d036922","sp|Q3ZPN4|ACMAT_VITLA Methanol O-anthraniloyltransferase OS=Vitis labrusca GN=AMAT PE=1 SV=1//1.24655e-38",106563890,106566238,"+",67166,"upstream"]
["chr6","LNC_004480","XLOC_044804","lncRNA",106496421,106496723,"-","Zm00001d036920_T001","Zm00001d036920",null,106398277,106400487,"-",95933,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036956_T002","Zm00001d036956","sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1//1.4924e-65",107321960,107324231,"+",99142,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036956_T001","Zm00001d036956","sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1//1.4924e-65",107321960,107324184,"+",99189,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T008","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107439142,107445248,"+",15484,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036959_T002","Zm00001d036959","sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2//3.84412e-06",107398589,107403318,"+",20055,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036959_T003","Zm00001d036959","sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2//3.84412e-06",107398888,107403297,"+",20076,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036963_T001","Zm00001d036963","sp|Q9ASX9|BH144_ARATH Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144 PE=1 SV=1//3.02326e-18",107494688,107495368,"+",71030,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036959_T001","Zm00001d036959","sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2//3.84412e-06",107398589,107403316,"+",20057,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036959_T006","Zm00001d036959","sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2//3.84412e-06",107400977,107403316,"+",20057,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036959_T007","Zm00001d036959","sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2//3.84412e-06",107400977,107403316,"+",20057,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036959_T004","Zm00001d036959","sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2//3.84412e-06",107398988,107403297,"+",20076,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036959_T005","Zm00001d036959","sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2//3.84412e-06",107398996,107403288,"+",20085,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036957_T001","Zm00001d036957","sp|Q6P819|RCD1_XENTR Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1//5.79537e-08",107329572,107334526,"+",88847,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036958_T001","Zm00001d036958","sp|Q6Z6L4|APM1A_ORYSJ Aminopeptidase M1-A OS=Oryza sativa subsp. japonica GN=Os02g0218200 PE=2 SV=1//5.23548e-59",107339840,107340667,"+",82706,"downstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T001","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107436798,107445278,"+",13140,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036962_T001","Zm00001d036962","sp|Q9LIC2|TMN7_ARATH Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1//3.30957e-139",107445718,107449609,"+",22060,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T003","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107437936,107445170,"+",14278,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T002","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107436798,107445278,"+",13140,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T005","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107439142,107445060,"+",15484,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T004","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107437936,107445192,"+",14278,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T007","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107439142,107445186,"+",15484,"upstream"]
["chr6","LNC_004481","XLOC_044814","lncRNA",107423374,107423657,"-","Zm00001d036961_T006","Zm00001d036961","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//3.9778e-94",107439142,107445173,"+",15484,"upstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037051_T001","Zm00001d037051","sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2//0",110497827,110502466,"+",43583,"downstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037051_T002","Zm00001d037051","sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2//0",110501031,110501993,"+",44056,"downstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d001414_T001","Zm00001d001414",null,110620376,110620964,"+",74109,"upstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037052_T005","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110627527,110628297,"+",81260,"upstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037052_T004","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110627514,110628366,"+",81247,"upstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037052_T003","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110620597,110622772,"+",74330,"upstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037052_T001","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110619969,110628343,"+",73702,"upstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037050_T002","Zm00001d037050","sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=2 SV=2//1.24528e-52",110492271,110494448,"+",51601,"downstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037050_T001","Zm00001d037050","sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=2 SV=2//1.24528e-52",110481817,110494448,"+",51601,"downstream"]
["chr6","LNC_004486","XLOC_044862","lncRNA",110546050,110546266,"-","Zm00001d037052_T002","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110620000,110622770,"+",73733,"upstream"]
["chr6","LNC_004487","XLOC_044869","lncRNA",111185392,111185677,"-","Zm00001d037064_T001","Zm00001d037064",null,111096907,111096980,"-",88411,"upstream"]
["chr6","LNC_004487","XLOC_044869","lncRNA",111185392,111185677,"-","Zm00001d037065_T001","Zm00001d037065","sp|P33544|YM23_MAIZE Uncharacterized 33.9 kDa protein in mitochondrial linear 2.3 KB plasmid OS=Zea mays PE=4 SV=1//0",111097381,111098265,"-",87126,"upstream"]
["chr6","LNC_004487","XLOC_044869","lncRNA",111185392,111185677,"-","Zm00001d037063_T001","Zm00001d037063",null,111096691,111096764,"-",88627,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T005","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110231082,"-",82435,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T004","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110231082,"-",82435,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T007","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110231910,"-",81607,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T018","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223890,110232746,"-",80771,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T006","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110231082,"-",82435,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T012","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223872,110231648,"-",81869,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T013","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223873,110226454,"-",87063,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T010","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223858,110232690,"-",80827,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T016","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223888,110232694,"-",80823,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T015","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223873,110232693,"-",80824,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T002","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110231082,"-",82435,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T025","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223953,110232694,"-",80823,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037044_T001","Zm00001d037044","sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1//3.14218e-06",110216081,110216708,"-",96809,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T019","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223891,110231715,"-",81802,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T023","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223949,110232693,"-",80824,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T022","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223949,110231082,"-",82435,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T021","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223949,110231082,"-",82435,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T020","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223946,110231915,"-",81602,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T026","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223954,110232686,"-",80831,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T003","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110231082,"-",82435,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T024","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223953,110232694,"-",80823,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T009","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110232694,"-",80823,"upstream"]
["chr6","LNC_004484","XLOC_044859","lncRNA",110313518,110315096,"-","Zm00001d037045_T008","Zm00001d037045","sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1//3.21967e-09",110223819,110232686,"-",80831,"upstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d037051_T001","Zm00001d037051","sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2//0",110497827,110502466,"+",20319,"downstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d037051_T002","Zm00001d037051","sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2//0",110501031,110501993,"+",20792,"downstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d001414_T001","Zm00001d001414",null,110620376,110620964,"+",97137,"upstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d037052_T003","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110620597,110622772,"+",97358,"upstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d037052_T001","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110619969,110628343,"+",96730,"upstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d037050_T002","Zm00001d037050","sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=2 SV=2//1.24528e-52",110492271,110494448,"+",28337,"downstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d037050_T001","Zm00001d037050","sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=2 SV=2//1.24528e-52",110481817,110494448,"+",28337,"downstream"]
["chr6","LNC_004485","XLOC_044861","lncRNA",110522786,110523238,"-","Zm00001d037052_T002","Zm00001d037052","sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1//1.23008e-65",110620000,110622770,"+",96761,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T002","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738152,"+",5026,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T003","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",5026,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T001","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738152,"+",5026,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T006","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",5026,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T007","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731197,127738134,"+",5032,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T004","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",5026,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T005","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",5026,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T009","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731352,127738152,"+",5187,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047361_T005","Zm00001d047361",null,127688202,127693139,"-",32787,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047361_T004","Zm00001d047361",null,127688200,127693192,"-",32734,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047361_T003","Zm00001d047361",null,127688165,127693192,"-",32734,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047361_T002","Zm00001d047361",null,127688165,127693192,"-",32734,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047361_T001","Zm00001d047361",null,127688165,127693147,"-",32779,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047364_T001","Zm00001d047364",null,127777265,127778338,"-",51100,"downstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047363_T001","Zm00001d047363",null,127740198,127740497,"-",14033,"downstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T010","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127732479,127738162,"+",6314,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T013","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127735594,127738131,"+",9429,"upstream"]
["chr9","LNC_006116","XLOC_060763","lncRNA",127725927,127726164,"-","Zm00001d047362_T012","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127732605,127738132,"+",6440,"upstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037091_T001","Zm00001d037091","sp|O48786|C734A_ARATH Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2 SV=1//5.21094e-125",111833522,111835548,"-",6901,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037087_T001","Zm00001d037087","sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1//0",111762433,111763755,"-",62614,"upstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037092_T004","Zm00001d037092","sp|Q1EG72|TPS11_MAIZE (S)-beta-macrocarpene synthase OS=Zea mays GN=TPS11 PE=1 SV=1//1.45815e-144",111878423,111883065,"-",51802,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037089_T001","Zm00001d037089","sp|B9X287|C7346_ORYSJ Cytochrome P450 734A6 OS=Oryza sativa subsp. japonica GN=CYP734A6 PE=2 SV=1//3.49914e-126",111806506,111808586,"-",17783,"upstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037088_T001","Zm00001d037088",null,111803363,111803435,"-",22934,"upstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037092_T001","Zm00001d037092","sp|Q1EG72|TPS11_MAIZE (S)-beta-macrocarpene synthase OS=Zea mays GN=TPS11 PE=1 SV=1//1.45815e-144",111878360,111883069,"-",51739,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T001","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753580,111762127,"+",64242,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T002","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753646,111762117,"+",64252,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T003","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753646,111762124,"+",64245,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T004","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753646,111762124,"+",64245,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T005","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753650,111762113,"+",64256,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T006","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753650,111762115,"+",64254,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T007","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753650,111762124,"+",64245,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T008","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111753694,111762095,"+",64274,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037086_T009","Zm00001d037086","sp|Q5SMU7|ORC1_ORYSJ Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica GN=ORC1 PE=2 SV=1//6.32127e-19",111754943,111762112,"+",64257,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037092_T003","Zm00001d037092","sp|Q1EG72|TPS11_MAIZE (S)-beta-macrocarpene synthase OS=Zea mays GN=TPS11 PE=1 SV=1//1.45815e-144",111878361,111883059,"-",51740,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037092_T002","Zm00001d037092","sp|Q1EG72|TPS11_MAIZE (S)-beta-macrocarpene synthase OS=Zea mays GN=TPS11 PE=1 SV=1//1.45815e-144",111878360,111883069,"-",51739,"downstream"]
["chr6","LNC_004488","XLOC_044887","lncRNA",111826370,111826620,"-","Zm00001d037090_T001","Zm00001d037090",null,111810222,111810979,"+",15390,"downstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037143_T001","Zm00001d037143","sp|Q8GXG1|ASPGB_ARATH Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2//3.82304e-19",113824084,113831011,"-",32973,"downstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T009","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765705,113776345,"-",14430,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T008","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765692,113776370,"-",14405,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T003","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765692,113776268,"-",14507,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T002","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765692,113776268,"-",14507,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T001","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765593,113776411,"-",14364,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T026","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113770328,113776343,"-",14432,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T007","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765692,113776268,"-",14507,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T006","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765692,113776268,"-",14507,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T005","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765692,113776268,"-",14507,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T022","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113776370,"-",14405,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T004","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765692,113776268,"-",14507,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037140_T001","Zm00001d037140","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//0",113744465,113748815,"-",41960,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037140_T003","Zm00001d037140","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//0",113744470,113748815,"-",41960,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037140_T002","Zm00001d037140","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//0",113744470,113747386,"-",43389,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037140_T005","Zm00001d037140","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//0",113744887,113748041,"-",42734,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037140_T004","Zm00001d037140","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//0",113744501,113748815,"-",41960,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037141_T001","Zm00001d037141",null,113759867,113760413,"+",30362,"downstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T021","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113776363,"-",14412,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037139_T001","Zm00001d037139","sp|Q9LZA6|SDP1_ARATH Triacylglycerol lipase SDP1 OS=Arabidopsis thaliana GN=SDP1 PE=1 SV=1//0",113727429,113734809,"-",55966,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T019","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113776348,"-",14427,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T023","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113776411,"-",14364,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T010","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765706,113776411,"-",14364,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T011","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765707,113773292,"-",17483,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T012","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113767067,"-",23708,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T013","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113776018,"-",14757,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T015","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113776344,"-",14431,"upstream"]
["chr6","LNC_004489","XLOC_044914","lncRNA",113790776,113791110,"-","Zm00001d037142_T017","Zm00001d037142","sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2//5.84184e-60",113765713,113776346,"-",14429,"upstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T002","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738152,"+",35273,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T003","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",35263,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T001","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738152,"+",35273,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T006","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",35263,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T007","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731197,127738134,"+",35291,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T004","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",35263,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T005","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731191,127738162,"+",35263,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T009","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127731352,127738152,"+",35273,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047361_T005","Zm00001d047361",null,127688202,127693139,"-",80286,"upstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047361_T004","Zm00001d047361",null,127688200,127693192,"-",80233,"upstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047361_T003","Zm00001d047361",null,127688165,127693192,"-",80233,"upstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047361_T002","Zm00001d047361",null,127688165,127693192,"-",80233,"upstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047361_T001","Zm00001d047361",null,127688165,127693147,"-",80278,"upstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047364_T001","Zm00001d047364",null,127777265,127778338,"-",1453,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047363_T001","Zm00001d047363",null,127740198,127740497,"-",32928,"upstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047366_T002","Zm00001d047366",null,127842431,127846903,"-",66619,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047366_T001","Zm00001d047366",null,127833105,127846903,"-",57293,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T010","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127732479,127738162,"+",35263,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T013","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127735594,127738131,"+",35294,"downstream"]
["chr9","LNC_006117","XLOC_060765","lncRNA",127773426,127775811,"-","Zm00001d047362_T012","Zm00001d047362","sp|Q9ZUM2|TOM3_ARATH Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2//2.89644e-06",127732605,127738132,"+",35293,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046257_T001","Zm00001d046257",null,77039201,77039274,"+",41330,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046261_T001","Zm00001d046261","sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1//1.45232e-61",77150413,77154114,"+",66097,"upstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T027","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T022","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T023","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T007","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T004","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T005","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T002","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T001","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035405,"+",45199,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T008","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T009","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046261_T002","Zm00001d046261","sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1//1.45232e-61",77150416,77154118,"+",66100,"upstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T039","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027208,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T038","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027123,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T037","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035806,"+",44798,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T036","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035757,"+",44847,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T035","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035751,"+",44853,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T034","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035751,"+",44853,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T033","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T031","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T010","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T013","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T015","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T014","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T016","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T019","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046255_T018","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",44893,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046258_T001","Zm00001d046258",null,77039417,77039490,"+",41114,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046262_T001","Zm00001d046262","sp|Q9SRZ6|ICDHC_ARATH Cytosolic isocitrate dehydrogenase [NADP] OS=Arabidopsis thaliana GN=CICDH PE=2 SV=1//6.8972e-129",77157097,77159734,"-",72781,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046256_T001","Zm00001d046256","sp|P33544|YM23_MAIZE Uncharacterized 33.9 kDa protein in mitochondrial linear 2.3 KB plasmid OS=Zea mays PE=4 SV=1//0",77037916,77038800,"+",41804,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046260_T002","Zm00001d046260","sp|Q36450|NDUS2_NICSY NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1//0",77047294,77053291,"+",27313,"downstream"]
["chr9","LNC_006035","XLOC_060098","lncRNA",77080605,77084315,"-","Zm00001d046260_T001","Zm00001d046260","sp|Q36450|NDUS2_NICSY NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1//0",77047294,77051889,"+",28715,"downstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047281_T001","Zm00001d047281","sp|Q9SVH3|PP328_ARATH Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana GN=At4g20740 PE=3 SV=1//2.75367e-11",125402411,125403326,"+",69888,"upstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T001","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125243894,"-",86359,"upstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047276_T001","Zm00001d047276","sp|Q10JL1|COBL5_ORYSJ COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1//0",125270207,125272239,"+",58014,"downstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T003","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125245017,"-",85236,"upstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T002","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125242433,125244799,"-",85454,"upstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047275_T004","Zm00001d047275","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//9.90848e-133",125243988,125245017,"-",85236,"upstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047278_T001","Zm00001d047278","sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1//6.74326e-22",125362228,125362929,"-",29705,"downstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047280_T001","Zm00001d047280",null,125381209,125381287,"+",48686,"upstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047279_T001","Zm00001d047279","sp|Q9LMX7|C78A5_ARATH Cytochrome P450 78A5 OS=Arabidopsis thaliana GN=CYP78A5 PE=2 SV=1//6.88594e-15",125381053,125382929,"-",48530,"downstream"]
["chr9","LNC_006114","XLOC_060722","lncRNA",125330254,125332522,"-","Zm00001d047279_T002","Zm00001d047279","sp|Q9LMX7|C78A5_ARATH Cytochrome P450 78A5 OS=Arabidopsis thaliana GN=CYP78A5 PE=2 SV=1//6.88594e-15",125381375,125382877,"-",48852,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046257_T001","Zm00001d046257",null,77039201,77039274,"+",38264,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046261_T001","Zm00001d046261","sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1//1.45232e-61",77150413,77154114,"+",66097,"upstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T027","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T022","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T023","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T007","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T004","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T005","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T002","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T001","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035405,"+",42133,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T008","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T009","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046261_T002","Zm00001d046261","sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1//1.45232e-61",77150416,77154118,"+",66100,"upstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T039","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027208,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T038","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027123,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T037","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035806,"+",41732,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T036","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035757,"+",41781,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T035","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035751,"+",41787,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T034","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035751,"+",41787,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T033","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T031","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T010","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T013","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T015","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T014","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
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["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046255_T018","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",41827,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046258_T001","Zm00001d046258",null,77039417,77039490,"+",38048,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046262_T001","Zm00001d046262","sp|Q9SRZ6|ICDHC_ARATH Cytosolic isocitrate dehydrogenase [NADP] OS=Arabidopsis thaliana GN=CICDH PE=2 SV=1//6.8972e-129",77157097,77159734,"-",72781,"downstream"]
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["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046260_T002","Zm00001d046260","sp|Q36450|NDUS2_NICSY NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1//0",77047294,77053291,"+",24247,"downstream"]
["chr9","LNC_006034","XLOC_060098","lncRNA",77077539,77084315,"-","Zm00001d046260_T001","Zm00001d046260","sp|Q36450|NDUS2_NICSY NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1//0",77047294,77051889,"+",25649,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047349_T001","Zm00001d047349","sp|Q336X9|MPK6_ORYSJ Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1//0",127177134,127181687,"+",10743,"upstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047352_T001","Zm00001d047352","sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus GN=LIN PE=1 SV=1//1.04445e-20",127264585,127268652,"-",98194,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047350_T002","Zm00001d047350",null,127190235,127190979,"-",23844,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T035","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127072685,127075745,"+",90405,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047352_T005","Zm00001d047352","sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus GN=LIN PE=1 SV=1//1.04445e-20",127264585,127268652,"-",98194,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047351_T001","Zm00001d047351",null,127223553,127225332,"+",57162,"upstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T029","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070700,127074563,"+",91587,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T028","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070686,127076009,"+",90141,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T007","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127076220,"+",89930,"downstream"]
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["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T005","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127075745,"+",90405,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T004","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127075745,"+",90405,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T003","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127075046,"+",91104,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T002","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070598,127075745,"+",90405,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T001","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070598,127075047,"+",91103,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T021","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070636,127075745,"+",90405,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T020","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070636,127075042,"+",91108,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T023","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070638,127076315,"+",89835,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T022","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070636,127075745,"+",90405,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T025","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070684,127075047,"+",91103,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T024","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070645,127076473,"+",89677,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T009","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127076473,"+",89677,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T008","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127076220,"+",89930,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047350_T001","Zm00001d047350",null,127190089,127191039,"-",23698,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047351_T002","Zm00001d047351",null,127223555,127225308,"+",57164,"upstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047351_T003","Zm00001d047351",null,127223557,127225332,"+",57166,"upstream"]
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["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047352_T003","Zm00001d047352","sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus GN=LIN PE=1 SV=1//1.04445e-20",127264585,127268652,"-",98194,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047352_T004","Zm00001d047352","sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus GN=LIN PE=1 SV=1//1.04445e-20",127264585,127268652,"-",98194,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T027","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070684,127076473,"+",89677,"downstream"]
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["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T014","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127076473,"+",89677,"downstream"]
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["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T026","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070684,127076473,"+",89677,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T018","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127076473,"+",89677,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T019","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070633,127075695,"+",90455,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T030","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070711,127076473,"+",89677,"downstream"]
["chr9","LNC_006115","XLOC_060757","lncRNA",127166151,127166390,"-","Zm00001d047347_T031","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070789,127076473,"+",89677,"downstream"]
["chr9","LNC_006037","XLOC_060124","lncRNA",81318103,81318308,"-","Zm00001d046333_T001","Zm00001d046333","sp|O49639|CDS2_ARATH Phosphatidate cytidylyltransferase 2 OS=Arabidopsis thaliana GN=CDS2 PE=1 SV=1//2.81732e-32",81219767,81228535,"-",89567,"upstream"]
["chr9","LNC_006037","XLOC_060124","lncRNA",81318103,81318308,"-","Zm00001d046334_T001","Zm00001d046334","sp|Q43135|C79A1_SORBI Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3//0",81310177,81311766,"-",6336,"upstream"]
["chr9","LNC_006036","XLOC_060119","lncRNA",80669419,80669703,"-","Zm00001d046331_T001","Zm00001d046331","sp|Q9UT23|MPH1_SCHPO ATP-dependent DNA helicase fml1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fml1 PE=1 SV=2//4.30507e-20",80740571,80743399,"-",70867,"downstream"]
["chr9","LNC_006036","XLOC_060119","lncRNA",80669419,80669703,"-","Zm00001d046330_T001","Zm00001d046330","sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1//2.1261e-67",80614574,80619993,"+",49425,"downstream"]
["chr9","LNC_006036","XLOC_060119","lncRNA",80669419,80669703,"-","Zm00001d046330_T002","Zm00001d046330","sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1//2.1261e-67",80614574,80620004,"+",49414,"downstream"]
["chr9","LNC_006036","XLOC_060119","lncRNA",80669419,80669703,"-","Zm00001d046330_T003","Zm00001d046330","sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1//2.1261e-67",80614913,80619992,"+",49426,"downstream"]
["chr9","LNC_006036","XLOC_060119","lncRNA",80669419,80669703,"-","Zm00001d046330_T005","Zm00001d046330","sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1//2.1261e-67",80614938,80620113,"+",49305,"downstream"]
["chr9","LNC_006036","XLOC_060119","lncRNA",80669419,80669703,"-","Zm00001d046330_T007","Zm00001d046330","sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1//2.1261e-67",80614965,80619992,"+",49426,"downstream"]
["chr9","LNC_006031","XLOC_060081","lncRNA",74434777,74435044,"-","Zm00001d046236_T005","Zm00001d046236","sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1//0",74515401,74516664,"+",80356,"upstream"]
["chr9","LNC_006031","XLOC_060081","lncRNA",74434777,74435044,"-","Zm00001d046236_T004","Zm00001d046236","sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1//0",74512904,74516670,"+",77859,"upstream"]
["chr9","LNC_006031","XLOC_060081","lncRNA",74434777,74435044,"-","Zm00001d046236_T001","Zm00001d046236","sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1//0",74512901,74516419,"+",77856,"upstream"]
["chr9","LNC_006031","XLOC_060081","lncRNA",74434777,74435044,"-","Zm00001d046236_T003","Zm00001d046236","sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1//0",74512904,74516657,"+",77859,"upstream"]
["chr9","LNC_006031","XLOC_060081","lncRNA",74434777,74435044,"-","Zm00001d046236_T002","Zm00001d046236","sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1//0",74512902,74516419,"+",77857,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T010","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244264,73250096,"-",81831,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T017","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244443,73250558,"-",81369,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046229_T001","Zm00001d046229","sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog OS=Arabidopsis thaliana GN=VAC14 PE=1 SV=2//2.29427e-50",73357616,73358633,"+",24617,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T016","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244287,73250551,"-",81376,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T008","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244263,73250556,"-",81371,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T009","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244263,73250560,"-",81367,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046230_T001","Zm00001d046230","sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana GN=ESD4 PE=1 SV=1//1.28692e-07",73361517,73365345,"+",28518,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T014","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244285,73250556,"-",81371,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T018","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73248230,73250675,"-",81252,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T015","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244285,73250556,"-",81371,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T013","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244271,73250556,"-",81371,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T001","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244262,73250556,"-",81371,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T002","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244262,73250675,"-",81252,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T003","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244262,73250675,"-",81252,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T004","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244263,73249939,"-",81988,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T011","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244271,73248318,"-",83609,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T006","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244263,73250556,"-",81371,"upstream"]
["chr9","LNC_006030","XLOC_060074","lncRNA",73331928,73332998,"-","Zm00001d046226_T007","Zm00001d046226","sp|Q8LGU1|AB8C_ARATH ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3//1.09241e-15",73244263,73250556,"-",81371,"upstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046257_T001","Zm00001d046257",null,77039201,77039274,"+",27077,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046261_T001","Zm00001d046261","sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1//1.45232e-61",77150413,77154114,"+",66098,"upstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T027","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T022","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T023","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T007","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T004","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T005","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T002","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T001","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035405,"+",30946,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T008","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T009","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046261_T002","Zm00001d046261","sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1//1.45232e-61",77150416,77154118,"+",66101,"upstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T039","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027208,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T038","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027123,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T037","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035806,"+",30545,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T036","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035757,"+",30594,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T035","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035751,"+",30600,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T034","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035751,"+",30600,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T033","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T031","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T010","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T013","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T015","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T014","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T016","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T019","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046255_T018","Zm00001d046255","sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana GN=PAPS4 PE=1 SV=1//3.48467e-39",77027118,77035711,"+",30640,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046258_T001","Zm00001d046258",null,77039417,77039490,"+",26861,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046262_T001","Zm00001d046262","sp|Q9SRZ6|ICDHC_ARATH Cytosolic isocitrate dehydrogenase [NADP] OS=Arabidopsis thaliana GN=CICDH PE=2 SV=1//6.8972e-129",77157097,77159734,"-",72782,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046256_T001","Zm00001d046256","sp|P33544|YM23_MAIZE Uncharacterized 33.9 kDa protein in mitochondrial linear 2.3 KB plasmid OS=Zea mays PE=4 SV=1//0",77037916,77038800,"+",27551,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046260_T002","Zm00001d046260","sp|Q36450|NDUS2_NICSY NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1//0",77047294,77053291,"+",13060,"downstream"]
["chr9","LNC_006033","XLOC_060098","lncRNA",77066352,77084314,"-","Zm00001d046260_T001","Zm00001d046260","sp|Q36450|NDUS2_NICSY NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1//0",77047294,77051889,"+",14462,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021546_T004","Zm00001d021546","sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana GN=NAD-ME1 PE=1 SV=1//1.26424e-18",155518833,155528833,"-",89962,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T021","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404492,155420323,"+",7626,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T020","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404480,155420324,"+",7625,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021545_T006","Zm00001d021545","sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1//7.67677e-82",155508040,155512108,"+",79169,"upstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021545_T005","Zm00001d021545","sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1//7.67677e-82",155508040,155511606,"+",79169,"upstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021545_T003","Zm00001d021545","sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1//7.67677e-82",155508012,155511612,"+",79141,"upstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T005","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404228,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021545_T001","Zm00001d021545","sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1//7.67677e-82",155507985,155511612,"+",79114,"upstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021540_T001","Zm00001d021540",null,155401002,155403922,"+",24027,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T004","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404188,155416453,"+",11496,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021542_T001","Zm00001d021542",null,155445924,155447228,"-",17053,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021538_T001","Zm00001d021538",null,155394966,155395664,"+",32285,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021545_T008","Zm00001d021545","sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1//7.67677e-82",155508095,155512108,"+",79224,"upstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T009","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404251,155417515,"+",10434,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T008","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404229,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T028","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155405881,155420276,"+",7673,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T003","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404186,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T002","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404186,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T001","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404186,155420275,"+",7674,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T007","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404229,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T006","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404229,155420276,"+",7673,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T023","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404648,155420277,"+",7672,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T022","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404508,155420305,"+",7644,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T042","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155410616,155420312,"+",7637,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d001261_T001","Zm00001d001261",null,155422661,155422885,"+",5064,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T018","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404480,155409918,"+",18031,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021544_T001","Zm00001d021544","sp|O82176|EXOL7_ARATH Protein EXORDIUM-like 7 OS=Arabidopsis thaliana GN=EXL7 PE=2 SV=2//7.12587e-89",155503583,155504602,"-",74712,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T010","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404256,155409918,"+",18031,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021546_T003","Zm00001d021546","sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana GN=NAD-ME1 PE=1 SV=1//1.26424e-18",155518832,155528949,"-",89961,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021546_T001","Zm00001d021546","sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana GN=NAD-ME1 PE=1 SV=1//1.26424e-18",155518816,155528668,"-",89945,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021546_T006","Zm00001d021546","sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana GN=NAD-ME1 PE=1 SV=1//1.26424e-18",155519017,155528833,"-",90146,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T015","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404441,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T016","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155404453,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021546_T005","Zm00001d021546","sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana GN=NAD-ME1 PE=1 SV=1//1.26424e-18",155518863,155528843,"-",89992,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T032","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155405883,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021546_T002","Zm00001d021546","sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana GN=NAD-ME1 PE=1 SV=1//1.26424e-18",155518816,155528949,"-",89945,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T036","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155405956,155420357,"+",7592,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T034","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155405887,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T024","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155405881,155418984,"+",8965,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T038","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155406764,155420422,"+",7527,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T039","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155407543,155420308,"+",7641,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021537_T002","Zm00001d021537","sp|Q9SPG3|MYB26_ARATH Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1//7.52452e-52",155328711,155330345,"+",97604,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021541_T027","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155405881,155420276,"+",7673,"downstream"]
["chr7","LNC_005035","XLOC_050475","lncRNA",155427950,155428870,"-","Zm00001d021537_T001","Zm00001d021537","sp|Q9SPG3|MYB26_ARATH Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1//7.52452e-52",155328673,155330151,"+",97798,"downstream"]
["chr9","LNC_006032","XLOC_060095","lncRNA",76546617,76546887,"-","Zm00001d046249_T005","Zm00001d046249","sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1//2.51477e-06",76621985,76629303,"-",75097,"downstream"]
["chr9","LNC_006032","XLOC_060095","lncRNA",76546617,76546887,"-","Zm00001d046249_T004","Zm00001d046249","sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1//2.51477e-06",76621742,76629241,"-",74854,"downstream"]
["chr9","LNC_006032","XLOC_060095","lncRNA",76546617,76546887,"-","Zm00001d046249_T003","Zm00001d046249","sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1//2.51477e-06",76621742,76628305,"-",74854,"downstream"]
["chr9","LNC_006032","XLOC_060095","lncRNA",76546617,76546887,"-","Zm00001d046249_T002","Zm00001d046249","sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1//2.51477e-06",76621682,76629303,"-",74794,"downstream"]
["chr9","LNC_006032","XLOC_060095","lncRNA",76546617,76546887,"-","Zm00001d046249_T001","Zm00001d046249","sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1//2.51477e-06",76621682,76629303,"-",74794,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051564_T002","Zm00001d051564","sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1//1.74519e-108",162881281,162886758,"-",20313,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051566_T001","Zm00001d051566","sp|Q9C658|DCP5_ARATH Protein decapping 5 OS=Arabidopsis thaliana GN=DCP5 PE=1 SV=1//1.35289e-24",162920158,162921863,"-",59190,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051561_T001","Zm00001d051561","sp|Q6NQL6|LPPE2_ARATH Lipid phosphate phosphatase epsilon 2, chloroplastic OS=Arabidopsis thaliana GN=LPPE2 PE=1 SV=1//1.12494e-38",162767963,162770959,"+",89781,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051567_T001","Zm00001d051567","sp|Q9FFZ1|PPH_ARATH Pheophytinase, chloroplastic OS=Arabidopsis thaliana GN=PPH PE=1 SV=1//3.15782e-22",162923074,162924909,"-",62106,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T013","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887407,162902290,"-",26439,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T034","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162895278,162902294,"-",34310,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T011","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T010","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T016","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887429,162902341,"-",26461,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T033","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162895077,162902290,"-",34109,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T032","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162894218,162896975,"-",33250,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T018","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887441,162902021,"-",26473,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T030","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887477,162902341,"-",26509,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051563_T002","Zm00001d051563","sp|Q43814|OTC_PEA Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1//0",162873948,162877670,"+",12980,"upstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051563_T003","Zm00001d051563","sp|Q43814|OTC_PEA Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1//0",162875461,162877609,"+",14493,"upstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051564_T001","Zm00001d051564","sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1//1.74519e-108",162881281,162886744,"-",20313,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051563_T001","Zm00001d051563","sp|Q43814|OTC_PEA Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1//0",162873948,162877609,"+",12980,"upstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051563_T004","Zm00001d051563","sp|Q43814|OTC_PEA Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1//0",162875575,162877605,"+",14607,"upstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051562_T001","Zm00001d051562",null,162800349,162804413,"-",56327,"upstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051562_T002","Zm00001d051562",null,162800351,162804404,"-",56336,"upstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T023","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887459,162897953,"-",26491,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051557_T001","Zm00001d051557","sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=1 SV=1//1.80488e-16",162758601,162761906,"-",98834,"upstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T001","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902080,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T028","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887477,162902281,"-",26509,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T003","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902289,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T004","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T005","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T006","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T007","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T008","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T009","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887403,162902341,"-",26435,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T020","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887446,162902238,"-",26478,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T021","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887447,162902243,"-",26479,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T026","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887471,162902290,"-",26503,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T027","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887476,162902235,"-",26508,"downstream"]
["chr4","LNC_003289","XLOC_032680","lncRNA",162860741,162860967,"-","Zm00001d051565_T024","Zm00001d051565","sp|Q8VXX4|RFC3_ARATH Replication factor C subunit 3 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1//3.07874e-74",162887460,162902306,"-",26492,"downstream"]
["chr4","LNC_003288","XLOC_032674","lncRNA",162691171,162691586,"-","Zm00001d051557_T001","Zm00001d051557","sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=1 SV=1//1.80488e-16",162758601,162761906,"-",67014,"downstream"]
["chr4","LNC_003288","XLOC_032674","lncRNA",162691171,162691586,"-","Zm00001d051554_T001","Zm00001d051554","sp|Q05JG2|ABAH1_ORYSJ Abscisic acid 8&apos;-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1//1.36759e-61",162654597,162657123,"+",34047,"downstream"]
["chr4","LNC_003288","XLOC_032674","lncRNA",162691171,162691586,"-","Zm00001d051554_T002","Zm00001d051554","sp|Q05JG2|ABAH1_ORYSJ Abscisic acid 8&apos;-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1//1.36759e-61",162654597,162657413,"+",33757,"downstream"]
["chr4","LNC_003288","XLOC_032674","lncRNA",162691171,162691586,"-","Zm00001d051561_T001","Zm00001d051561","sp|Q6NQL6|LPPE2_ARATH Lipid phosphate phosphatase epsilon 2, chloroplastic OS=Arabidopsis thaliana GN=LPPE2 PE=1 SV=1//1.12494e-38",162767963,162770959,"+",76376,"upstream"]
["chr4","LNC_003288","XLOC_032674","lncRNA",162691171,162691586,"-","Zm00001d051556_T001","Zm00001d051556","sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1//0",162737448,162739364,"-",45861,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d026922_T001","Zm00001d026922",null,158609318,158609883,"-",32776,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051439_T002","Zm00001d051439","sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2//2.57864e-28",158534257,158535102,"-",40699,"upstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051439_T001","Zm00001d051439","sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2//2.57864e-28",158534101,158536459,"-",39342,"upstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051438_T005","Zm00001d051438","sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1//6.84467e-13",158511600,158522711,"+",53090,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051438_T004","Zm00001d051438","sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1//6.84467e-13",158511594,158522715,"+",53086,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051438_T007","Zm00001d051438","sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1//6.84467e-13",158511771,158522710,"+",53091,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051438_T006","Zm00001d051438","sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1//6.84467e-13",158511652,158522710,"+",53091,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051438_T001","Zm00001d051438","sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1//6.84467e-13",158511587,158513440,"+",62361,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051438_T003","Zm00001d051438","sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1//6.84467e-13",158511587,158522751,"+",53050,"downstream"]
["chr4","LNC_003281","XLOC_032612","lncRNA",158575802,158576541,"-","Zm00001d051438_T002","Zm00001d051438","sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1//6.84467e-13",158511587,158522726,"+",53075,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T033","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157205299,157214250,"-",15093,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T028","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204614,157214252,"-",14408,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T005","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204516,157214270,"-",14310,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T015","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204556,157209949,"-",14350,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T014","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204537,157214368,"-",14331,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T030","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204619,157214102,"-",14413,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T011","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204537,157214253,"-",14331,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T010","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204537,157214213,"-",14331,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051397_T001","Zm00001d051397","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//3.18694e-37",157102240,157105793,"+",68603,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051403_T003","Zm00001d051403","sp|Q9AQU5|PIP13_MAIZE Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1//0",157200585,157203987,"+",10379,"upstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051403_T002","Zm00001d051403","sp|Q9AQU5|PIP13_MAIZE Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1//0",157200485,157203817,"+",10279,"upstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051403_T001","Zm00001d051403","sp|Q9AQU5|PIP13_MAIZE Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1//0",157200400,157203987,"+",10194,"upstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T029","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204614,157214292,"-",14408,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T018","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204558,157214219,"-",14352,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051400_T001","Zm00001d051400",null,157135550,157135921,"+",38475,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T016","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082422,157089052,"+",85344,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T015","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082419,157089002,"+",85394,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T014","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082356,157089051,"+",85345,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T012","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082350,157089077,"+",85319,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T010","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082350,157089020,"+",85376,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T019","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082423,157089025,"+",85371,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T018","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082422,157089075,"+",85321,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T020","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204562,157214361,"-",14356,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T003","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204494,157214368,"-",14288,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T026","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204614,157214252,"-",14408,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T023","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204594,157214271,"-",14388,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051399_T005","Zm00001d051399","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//2.68215e-25",157114767,157120550,"+",53846,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051399_T001","Zm00001d051399","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//2.68215e-25",157106497,157120288,"+",54108,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T021","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204592,157214255,"-",14386,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051399_T003","Zm00001d051399","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//2.68215e-25",157106521,157112985,"+",61411,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051399_T002","Zm00001d051399","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//2.68215e-25",157106497,157120550,"+",53846,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051395_T001","Zm00001d051395","sp|Q0JBH9|ERG3_ORYSJ Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1//3.15757e-09",157078133,157079253,"+",95143,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051399_T004","Zm00001d051399","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//2.68215e-25",157114767,157120550,"+",53846,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051399_T007","Zm00001d051399","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//2.68215e-25",157114894,157120550,"+",53846,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051399_T006","Zm00001d051399","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//2.68215e-25",157114894,157120550,"+",53846,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T002","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204494,157214368,"-",14288,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T008","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082324,157089154,"+",85242,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T001","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204494,157214258,"-",14288,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051404_T004","Zm00001d051404","sp|Q9CAD5|YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1//0",157204494,157214368,"-",14288,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T009","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082324,157089154,"+",85242,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T004","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082319,157089154,"+",85242,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T005","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082319,157089154,"+",85242,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T006","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082324,157087051,"+",87345,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T007","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082324,157089154,"+",85242,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T002","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082319,157089152,"+",85244,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T003","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082319,157089152,"+",85244,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051401_T001","Zm00001d051401",null,157151648,157153169,"+",21227,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T022","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082752,157089050,"+",85346,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T023","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157083539,157088966,"+",85430,"downstream"]
["chr4","LNC_003280","XLOC_032586","lncRNA",157174397,157190205,"-","Zm00001d051396_T021","Zm00001d051396","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//5.31071e-07",157082427,157089073,"+",85323,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051457_T002","Zm00001d051457","sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1//0",159345014,159347448,"+",74448,"upstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051457_T001","Zm00001d051457","sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1//0",159341143,159347527,"+",70577,"upstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051453_T001","Zm00001d051453",null,159243303,159244550,"+",25751,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T003","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348381,159350338,"-",77815,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T002","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348371,159355580,"-",77805,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T001","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348371,159350453,"-",77805,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051456_T001","Zm00001d051456","sp|Q6EPP9|GRF10_ORYSJ Growth-regulating factor 10 OS=Oryza sativa subsp. japonica GN=GRF10 PE=2 SV=1//2.68259e-88",159322444,159323547,"+",51878,"upstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T006","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159350786,159355666,"-",80220,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051454_T001","Zm00001d051454","sp|Q9XIC7|SERK2_ARATH Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1//9.41225e-18",159245449,159248592,"+",21709,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T004","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348382,159350458,"-",77816,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T008","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159352938,159355373,"-",82372,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T007","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159350788,159355666,"-",80222,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051458_T005","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159350786,159355580,"-",80220,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051455_T001","Zm00001d051455","sp|M4MR97|RNJ_SINM2 Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) GN=rnj PE=3 SV=1//1.2124e-21",159251080,159254705,"+",15596,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051455_T002","Zm00001d051455","sp|M4MR97|RNJ_SINM2 Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) GN=rnj PE=3 SV=1//1.2124e-21",159251080,159254747,"+",15554,"downstream"]
["chr4","LNC_003283","XLOC_032623","lncRNA",159270302,159270565,"-","Zm00001d051455_T003","Zm00001d051455","sp|M4MR97|RNJ_SINM2 Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) GN=rnj PE=3 SV=1//1.2124e-21",159253690,159254695,"+",15606,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051457_T002","Zm00001d051457","sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1//0",159345014,159347448,"+",76058,"upstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051457_T001","Zm00001d051457","sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1//0",159341143,159347527,"+",72187,"upstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051453_T001","Zm00001d051453",null,159243303,159244550,"+",24128,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T003","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348381,159350338,"-",79425,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T002","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348371,159355580,"-",79415,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T001","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348371,159350453,"-",79415,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051456_T001","Zm00001d051456","sp|Q6EPP9|GRF10_ORYSJ Growth-regulating factor 10 OS=Oryza sativa subsp. japonica GN=GRF10 PE=2 SV=1//2.68259e-88",159322444,159323547,"+",53488,"upstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T006","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159350786,159355666,"-",81830,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051454_T001","Zm00001d051454","sp|Q9XIC7|SERK2_ARATH Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1//9.41225e-18",159245449,159248592,"+",20086,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T004","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159348382,159350458,"-",79426,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T008","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159352938,159355373,"-",83982,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T007","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159350788,159355666,"-",81832,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051458_T005","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",159350786,159355580,"-",81830,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051455_T001","Zm00001d051455","sp|M4MR97|RNJ_SINM2 Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) GN=rnj PE=3 SV=1//1.2124e-21",159251080,159254705,"+",13973,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051455_T002","Zm00001d051455","sp|M4MR97|RNJ_SINM2 Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) GN=rnj PE=3 SV=1//1.2124e-21",159251080,159254747,"+",13931,"downstream"]
["chr4","LNC_003282","XLOC_032622","lncRNA",159268679,159268955,"-","Zm00001d051455_T003","Zm00001d051455","sp|M4MR97|RNJ_SINM2 Ribonuclease J OS=Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011) GN=rnj PE=3 SV=1//1.2124e-21",159253690,159254695,"+",13983,"downstream"]
["chr4","LNC_003285","XLOC_032665","lncRNA",161782026,161782322,"-","Zm00001d051535_T001","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161759716,161766998,"+",15027,"downstream"]
["chr4","LNC_003285","XLOC_032665","lncRNA",161782026,161782322,"-","Zm00001d051535_T003","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161759771,161766532,"+",15493,"downstream"]
["chr4","LNC_003285","XLOC_032665","lncRNA",161782026,161782322,"-","Zm00001d051535_T002","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161759716,161766998,"+",15027,"downstream"]
["chr4","LNC_003285","XLOC_032665","lncRNA",161782026,161782322,"-","Zm00001d051539_T001","Zm00001d051539",null,161859452,161863983,"+",77129,"upstream"]
["chr4","LNC_003285","XLOC_032665","lncRNA",161782026,161782322,"-","Zm00001d051535_T004","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161760336,161766998,"+",15027,"downstream"]
["chr4","LNC_003285","XLOC_032665","lncRNA",161782026,161782322,"-","Zm00001d051534_T001","Zm00001d051534","sp|Q689D6|RPD1_ARATH Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1//1.97249e-25",161756938,161758313,"-",23712,"upstream"]
["chr4","LNC_003285","XLOC_032665","lncRNA",161782026,161782322,"-","Zm00001d051538_T001","Zm00001d051538",null,161854203,161855748,"+",71880,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051535_T001","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161759716,161766998,"+",94668,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051529_T001","Zm00001d051529","sp|Q42982|4CL2_ORYSJ Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2//3.41585e-103",161594500,161598787,"-",66021,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051529_T002","Zm00001d051529","sp|Q42982|4CL2_ORYSJ Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2//3.41585e-103",161594500,161598787,"-",66021,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051529_T003","Zm00001d051529","sp|Q42982|4CL2_ORYSJ Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2//3.41585e-103",161594506,161598938,"-",65870,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051535_T004","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161760336,161766998,"+",95288,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051534_T001","Zm00001d051534","sp|Q689D6|RPD1_ARATH Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1//1.97249e-25",161756938,161758313,"-",91890,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051532_T001","Zm00001d051532","sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1//1.09583e-172",161648710,161650879,"-",13929,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051532_T002","Zm00001d051532","sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1//1.09583e-172",161648710,161651033,"-",13775,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051535_T003","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161759771,161766532,"+",94723,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T003","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161586091,161589523,"+",75285,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T002","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161585947,161594533,"+",70275,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T001","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161585947,161594533,"+",70275,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051535_T002","Zm00001d051535","sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis GN=atad3-b PE=2 SV=1//9.10711e-95",161759716,161766998,"+",94668,"upstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T007","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161591841,161594430,"+",70378,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T006","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161591180,161594409,"+",70399,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T005","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161590863,161594533,"+",70275,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T004","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161586125,161589518,"+",75290,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T009","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161591844,161594403,"+",70405,"downstream"]
["chr4","LNC_003284","XLOC_032662","lncRNA",161664809,161665047,"-","Zm00001d051528_T008","Zm00001d051528","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.90083e-26",161591841,161594490,"+",70318,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051553_T005","Zm00001d051553","sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14 OS=Arabidopsis thaliana GN=ROPGEF14 PE=1 SV=1//3.0448e-124",162532611,162535067,"-",92502,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051553_T004","Zm00001d051553","sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14 OS=Arabidopsis thaliana GN=ROPGEF14 PE=1 SV=1//3.0448e-124",162532578,162537805,"-",92469,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051553_T006","Zm00001d051553","sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14 OS=Arabidopsis thaliana GN=ROPGEF14 PE=1 SV=1//3.0448e-124",162532612,162535067,"-",92503,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051553_T001","Zm00001d051553","sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14 OS=Arabidopsis thaliana GN=ROPGEF14 PE=1 SV=1//3.0448e-124",162532245,162537805,"-",92136,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051551_T001","Zm00001d051551",null,162409039,162410028,"+",29510,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051553_T003","Zm00001d051553","sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14 OS=Arabidopsis thaliana GN=ROPGEF14 PE=1 SV=1//3.0448e-124",162532545,162535067,"-",92436,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051553_T002","Zm00001d051553","sp|Q56WM6|ROGFE_ARATH Rop guanine nucleotide exchange factor 14 OS=Arabidopsis thaliana GN=ROPGEF14 PE=1 SV=1//3.0448e-124",162532542,162535067,"-",92433,"downstream"]
["chr4","LNC_003287","XLOC_032672","lncRNA",162439539,162440108,"-","Zm00001d051552_T001","Zm00001d051552","sp|Q0WRJ2|TC10A_ARATH 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana GN=TSC10A PE=1 SV=1//3.9185e-103",162529433,162531336,"+",89324,"upstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T007","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946590,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T028","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946605,161954287,"+",37017,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T005","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946556,161952655,"+",38649,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T004","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946553,161954535,"+",36769,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T003","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946553,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T001","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946553,161954315,"+",36989,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T073","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161948740,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T021","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946604,161954231,"+",37073,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T020","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946603,161953267,"+",38037,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T023","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946604,161954309,"+",36995,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T025","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946605,161954255,"+",37049,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T009","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946590,161954336,"+",36968,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T071","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161948515,161954231,"+",37073,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051546_T002","Zm00001d051546","sp|P91924|ARF_DUGJA ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3//2.40962e-80",162063438,162066609,"-",71861,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051546_T003","Zm00001d051546","sp|P91924|ARF_DUGJA ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3//2.40962e-80",162063550,162066583,"-",71973,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051540_T001","Zm00001d051540","sp|Q59RQ0|PIF1_CANAL ATP-dependent DNA helicase PIF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PIF1 PE=3 SV=1//3.59156e-10",161895526,161904774,"+",86530,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051545_T004","Zm00001d051545","sp|P74007|SPOT_SYNY3 Probable guanosine-3&apos;,5&apos;-bis(diphosphate) 3&apos;-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1//3.62167e-07",162051574,162062835,"-",59997,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051544_T002","Zm00001d051544",null,162017524,162021747,"-",25947,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051545_T002","Zm00001d051545","sp|P74007|SPOT_SYNY3 Probable guanosine-3&apos;,5&apos;-bis(diphosphate) 3&apos;-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1//3.62167e-07",162051563,162062835,"-",59986,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051545_T003","Zm00001d051545","sp|P74007|SPOT_SYNY3 Probable guanosine-3&apos;,5&apos;-bis(diphosphate) 3&apos;-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1//3.62167e-07",162051563,162062835,"-",59986,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051545_T001","Zm00001d051545","sp|P74007|SPOT_SYNY3 Probable guanosine-3&apos;,5&apos;-bis(diphosphate) 3&apos;-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1//3.62167e-07",162051563,162057825,"-",59986,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051545_T005","Zm00001d051545","sp|P74007|SPOT_SYNY3 Probable guanosine-3&apos;,5&apos;-bis(diphosphate) 3&apos;-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1//3.62167e-07",162051698,162059434,"-",60121,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051544_T001","Zm00001d051544",null,162017524,162021747,"-",25947,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051544_T003","Zm00001d051544",null,162017566,162021614,"-",25989,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T039","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954335,"+",36969,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051544_T004","Zm00001d051544",null,162017606,162021747,"-",26029,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T049","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946625,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T069","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161947125,161952892,"+",38412,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T068","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946816,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T043","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954355,"+",36949,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T064","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946738,161952490,"+",38814,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T041","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954335,"+",36969,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T040","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954335,"+",36969,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T047","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946607,161954354,"+",36950,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T046","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954535,"+",36769,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T015","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946601,161954248,"+",37056,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T017","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946601,161954314,"+",36990,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T010","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946595,161954313,"+",36991,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T011","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946600,161954334,"+",36970,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T013","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946600,161954336,"+",36968,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T037","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T034","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954309,"+",36995,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T035","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954310,"+",36994,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T032","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161954309,"+",36995,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T030","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946606,161952490,"+",38814,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051543_T001","Zm00001d051543","sp|O50003|RL12_PRUAR 60S ribosomal protein L12 OS=Prunus armeniaca GN=RPL12 PE=2 SV=1//1.49646e-104",162016341,162016841,"-",24764,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T075","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161950837,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051541_T001","Zm00001d051541","sp|Q9SJP2|FUT4_ARATH Probable fucosyltransferase 4 OS=Arabidopsis thaliana GN=FUT4 PE=2 SV=2//5.8825e-26",161909367,161914340,"+",76964,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051546_T001","Zm00001d051546","sp|P91924|ARF_DUGJA ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3//2.40962e-80",162063429,162066577,"-",71852,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T066","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946746,161954222,"+",37082,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T076","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161950962,161954255,"+",37049,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T058","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946663,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T059","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946663,161954333,"+",36971,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T050","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946629,161954485,"+",36819,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T051","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946634,161954253,"+",37051,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T052","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946637,161954254,"+",37050,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T054","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946663,161952491,"+",38813,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T056","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946663,161952889,"+",38415,"downstream"]
["chr4","LNC_003286","XLOC_032666","lncRNA",161991305,161991576,"-","Zm00001d051542_T057","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",161946663,161954333,"+",36971,"downstream"]
["chr1","LNC_000741","XLOC_007628","lncRNA",223806179,223806643,"-","Zm00001d032359_T002","Zm00001d032359","sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1//2.00441e-26",223828341,223831895,"-",21697,"downstream"]
["chr1","LNC_000741","XLOC_007628","lncRNA",223806179,223806643,"-","Zm00001d032359_T003","Zm00001d032359","sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1//2.00441e-26",223828407,223831857,"-",21763,"downstream"]
["chr1","LNC_000741","XLOC_007628","lncRNA",223806179,223806643,"-","Zm00001d032359_T001","Zm00001d032359","sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1//2.00441e-26",223828341,223831801,"-",21697,"downstream"]
["chr1","LNC_000741","XLOC_007628","lncRNA",223806179,223806643,"-","Zm00001d032358_T001","Zm00001d032358","sp|Q94BT2|AIR12_ARATH Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3//1.42534e-27",223748469,223751668,"-",54510,"upstream"]
["chr1","LNC_000741","XLOC_007628","lncRNA",223806179,223806643,"-","Zm00001d032357_T001","Zm00001d032357","sp|Q8LCY2|ISAM2_ARATH Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2//6.63736e-15",223732522,223733692,"+",72486,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T007","Zm00001d032350",null,223440645,223444719,"-",45898,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T006","Zm00001d032350",null,223440628,223444781,"-",45881,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d022922_T001","Zm00001d022922",null,223352559,223353409,"-",41062,"upstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T004","Zm00001d032350",null,223440463,223444783,"-",45716,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032345_T001","Zm00001d032345","sp|Q8GYB1|NUD15_ARATH Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana GN=NUDT15 PE=1 SV=2//4.50041e-40",223305606,223306777,"-",87694,"upstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T001","Zm00001d032350",null,223440445,223444779,"-",45698,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032347_T001","Zm00001d032347","sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3//4.05147e-51",223350470,223352163,"+",42308,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T005","Zm00001d032350",null,223440616,223444616,"-",45869,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T009","Zm00001d032350",null,223440699,223444698,"-",45952,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T008","Zm00001d032350",null,223440693,223443528,"-",45946,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d022923_T001","Zm00001d022923",null,223444349,223444553,"+",49602,"upstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032346_T001","Zm00001d032346","sp|Q6ZDJ7|UGE2_ORYSJ UDP-glucose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UGE-2 PE=2 SV=1//0",223326874,223334279,"+",60192,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032346_T002","Zm00001d032346","sp|Q6ZDJ7|UGE2_ORYSJ UDP-glucose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UGE-2 PE=2 SV=1//0",223326874,223334279,"+",60192,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032348_T001","Zm00001d032348",null,223363214,223365428,"+",29043,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T010","Zm00001d032350",null,223440764,223444561,"-",46017,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T003","Zm00001d032350",null,223440457,223444783,"-",45710,"downstream"]
["chr1","LNC_000740","XLOC_007622","lncRNA",223394472,223394746,"-","Zm00001d032350_T002","Zm00001d032350",null,223440457,223444553,"-",45710,"downstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032375_T004","Zm00001d032375",null,224463352,224465862,"+",92554,"downstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T011","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515491,224521696,"-",36720,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T012","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515562,224521743,"-",36673,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T006","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515451,224521210,"-",37206,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032378_T001","Zm00001d032378",null,224572120,224573679,"-",13397,"downstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032375_T001","Zm00001d032375",null,224460932,224465862,"+",92554,"downstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032380_T001","Zm00001d032380","sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0575 PE=4 SV=1//2.95738e-23",224652544,224684417,"-",93821,"downstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032379_T002","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",224580609,224585370,"+",21886,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032379_T003","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",224580650,224585246,"+",21927,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032379_T001","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",224580609,224585281,"+",21886,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032379_T004","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",224580668,224585282,"+",21945,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032379_T005","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",224580700,224585280,"+",21977,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032377_T001","Zm00001d032377",null,224559413,224563087,"+",690,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032377_T002","Zm00001d032377",null,224559413,224563087,"+",690,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032377_T003","Zm00001d032377",null,224559413,224563087,"+",690,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032377_T004","Zm00001d032377",null,224559413,224563087,"+",690,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032377_T005","Zm00001d032377",null,224559413,224563087,"+",690,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032377_T006","Zm00001d032377",null,224559435,224562961,"+",712,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032377_T007","Zm00001d032377",null,224559440,224562954,"+",717,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T002","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515447,224521700,"-",36716,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T001","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515447,224521700,"-",36716,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032375_T002","Zm00001d032375",null,224460932,224465862,"+",92554,"downstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032375_T003","Zm00001d032375",null,224460932,224465862,"+",92554,"downstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T004","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515450,224521700,"-",36716,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T009","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515467,224521563,"-",36853,"upstream"]
["chr1","LNC_000743","XLOC_007640","lncRNA",224558417,224558722,"-","Zm00001d032376_T008","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",224515453,224521719,"-",36697,"upstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T008","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244880,224257011,"-",18128,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T009","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244890,224256544,"-",18138,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T004","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244775,224257054,"-",18023,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T005","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244775,224257054,"-",18023,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T006","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244870,224257054,"-",18118,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T007","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244880,224257007,"-",18128,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d022924_T001","Zm00001d022924",null,224240616,224242659,"+",13864,"upstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T001","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244775,224257054,"-",18023,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T002","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244775,224257054,"-",18023,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T003","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244775,224257054,"-",18023,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032371_T002","Zm00001d032371","sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1//1.95779e-39",224163323,224164714,"+",61212,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032371_T003","Zm00001d032371","sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1//1.95779e-39",224163323,224168489,"+",57437,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032371_T001","Zm00001d032371","sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1//1.95779e-39",224163203,224164739,"+",61187,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T011","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244890,224256986,"-",18138,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032373_T010","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",224244890,224256983,"-",18138,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032370_T001","Zm00001d032370","sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2//2.37792e-47",224157746,224162834,"-",63092,"upstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032372_T001","Zm00001d032372",null,224206626,224207189,"+",18737,"downstream"]
["chr1","LNC_000742","XLOC_007635","lncRNA",224225927,224226751,"-","Zm00001d032370_T002","Zm00001d032370","sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2//2.37792e-47",224157967,224162760,"-",63166,"upstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d022925_T001","Zm00001d022925",null,227274460,227274929,"+",8666,"upstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d032454_T002","Zm00001d032454",null,227220061,227226083,"-",39388,"upstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d032454_T003","Zm00001d032454",null,227220064,227226083,"-",39388,"upstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d032454_T001","Zm00001d032454",null,227220061,227226083,"-",39388,"upstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d032454_T004","Zm00001d032454",null,227220064,227226179,"-",39292,"upstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d032455_T001","Zm00001d032455","sp|Q337B8|ETFQO_ORYSJ Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os10g0516300 PE=3 SV=1//0",227281639,227288594,"-",15845,"downstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d032455_T003","Zm00001d032455","sp|Q337B8|ETFQO_ORYSJ Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os10g0516300 PE=3 SV=1//0",227281640,227288496,"-",15846,"downstream"]
["chr1","LNC_000745","XLOC_007678","lncRNA",227265472,227265793,"-","Zm00001d032455_T002","Zm00001d032455","sp|Q337B8|ETFQO_ORYSJ Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os10g0516300 PE=3 SV=1//0",227281639,227288608,"-",15845,"downstream"]
["chr1","LNC_000744","XLOC_007676","lncRNA",227127050,227127291,"-","Zm00001d032453_T003","Zm00001d032453","sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1//8.75417e-08",227157631,227159833,"+",30339,"upstream"]
["chr1","LNC_000744","XLOC_007676","lncRNA",227127050,227127291,"-","Zm00001d032453_T002","Zm00001d032453","sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1//8.75417e-08",227156629,227159833,"+",29337,"upstream"]
["chr1","LNC_000744","XLOC_007676","lncRNA",227127050,227127291,"-","Zm00001d032453_T001","Zm00001d032453","sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1//8.75417e-08",227155946,227159833,"+",28654,"upstream"]
["chr1","LNC_000744","XLOC_007676","lncRNA",227127050,227127291,"-","Zm00001d032454_T001","Zm00001d032454",null,227220061,227226083,"-",92769,"downstream"]
["chr1","LNC_000744","XLOC_007676","lncRNA",227127050,227127291,"-","Zm00001d032454_T004","Zm00001d032454",null,227220064,227226179,"-",92772,"downstream"]
["chr1","LNC_000744","XLOC_007676","lncRNA",227127050,227127291,"-","Zm00001d032454_T002","Zm00001d032454",null,227220061,227226083,"-",92769,"downstream"]
["chr1","LNC_000744","XLOC_007676","lncRNA",227127050,227127291,"-","Zm00001d032454_T003","Zm00001d032454",null,227220064,227226083,"-",92772,"downstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032500_T003","Zm00001d032500","sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1//2.35702e-105",228443001,228447048,"-",76760,"upstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032500_T001","Zm00001d032500","sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1//2.35702e-105",228443001,228447048,"-",76760,"upstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032500_T002","Zm00001d032500","sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1//2.35702e-105",228443001,228447048,"-",76760,"upstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032498_T001","Zm00001d032498","sp|Q8L5R3|TBCD_ARATH Tubulin-folding cofactor D OS=Arabidopsis thaliana GN=TFCD PE=2 SV=1//1.31543e-06",228418762,228431630,"+",92178,"downstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032499_T001","Zm00001d032499","sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1//3.12706e-92",228432456,228434442,"-",89366,"upstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032501_T003","Zm00001d032501","sp|Q9SXA6|ENDO1_ARATH Endonuclease 1 OS=Arabidopsis thaliana GN=ENDO1 PE=1 SV=1//9.48169e-142",228551113,228552785,"-",5207,"downstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032501_T002","Zm00001d032501","sp|Q9SXA6|ENDO1_ARATH Endonuclease 1 OS=Arabidopsis thaliana GN=ENDO1 PE=1 SV=1//9.48169e-142",228551087,228553143,"-",5181,"downstream"]
["chr1","LNC_000747","XLOC_007701","lncRNA",228523809,228545905,"-","Zm00001d032501_T001","Zm00001d032501","sp|Q9SXA6|ENDO1_ARATH Endonuclease 1 OS=Arabidopsis thaliana GN=ENDO1 PE=1 SV=1//9.48169e-142",228550973,228553155,"-",5067,"downstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032472_T002","Zm00001d032472","sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2 OS=Arabidopsis thaliana GN=EDA2 PE=2 SV=2//0",227853887,227862240,"-",81687,"upstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032472_T003","Zm00001d032472","sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2 OS=Arabidopsis thaliana GN=EDA2 PE=2 SV=2//0",227854004,227856502,"-",87425,"upstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032475_T001","Zm00001d032475","sp|Q9ZUZ3|SAU32_ARATH Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1//2.94118e-18",227990837,227991226,"+",46635,"upstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032472_T001","Zm00001d032472","sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2 OS=Arabidopsis thaliana GN=EDA2 PE=2 SV=2//0",227853798,227862240,"-",81687,"upstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032478_T001","Zm00001d032478","sp|Q689D6|RPD1_ARATH Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1//2.48667e-42",228035780,228036940,"+",91578,"upstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032472_T004","Zm00001d032472","sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2 OS=Arabidopsis thaliana GN=EDA2 PE=2 SV=2//0",227854004,227862240,"-",81687,"upstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032476_T001","Zm00001d032476","sp|Q9ZPH9|PMTF_ARATH Probable methyltransferase PMT15 OS=Arabidopsis thaliana GN=At4g00750 PE=2 SV=1//2.09416e-11",227994103,227996895,"-",49901,"downstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032473_T001","Zm00001d032473","sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=1 SV=1//0",227870996,227876186,"+",67741,"downstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032473_T003","Zm00001d032473","sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=1 SV=1//0",227871937,227876111,"+",67816,"downstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032473_T002","Zm00001d032473","sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=1 SV=1//0",227871219,227876110,"+",67817,"downstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032474_T001","Zm00001d032474","sp|Q9LK21|CXE11_ARATH Probable carboxylesterase 11 OS=Arabidopsis thaliana GN=CXE11 PE=2 SV=1//8.38689e-13",227961252,227961566,"-",17050,"downstream"]
["chr1","LNC_000746","XLOC_007689","lncRNA",227943928,227944201,"-","Zm00001d032479_T001","Zm00001d032479",null,228038295,228039122,"-",94093,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032518_T001","Zm00001d032518","sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1//1.00629e-172",229150242,229151756,"-",1414,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T017","Zm00001d032520",null,229238505,229243711,"-",89677,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T016","Zm00001d032520",null,229238505,229243711,"-",89677,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T011","Zm00001d032520",null,229238505,229243604,"-",89677,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032517_T001","Zm00001d032517",null,229147482,229149102,"+",-1346,"antisense"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032517_T002","Zm00001d032517",null,229147615,229149100,"+",-1213,"antisense"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032515_T002","Zm00001d032515","sp|Q32LM2|SGTA_BOVIN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1//2.13542e-08",229135671,229137282,"+",9442,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032515_T001","Zm00001d032515","sp|Q32LM2|SGTA_BOVIN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1//2.13542e-08",229135671,229137282,"+",9442,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T018","Zm00001d032520",null,229238505,229243711,"-",89677,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032519_T002","Zm00001d032519",null,229233718,229235906,"-",84890,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032519_T001","Zm00001d032519",null,229233530,229236014,"-",84702,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032516_T005","Zm00001d032516",null,229138354,229141932,"+",4792,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032516_T003","Zm00001d032516",null,229137340,229142063,"+",4661,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032516_T002","Zm00001d032516",null,229137340,229142063,"+",4661,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032516_T001","Zm00001d032516",null,229137340,229142063,"+",4661,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T008","Zm00001d032520",null,229238505,229243161,"-",89677,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T024","Zm00001d032520",null,229239591,229243546,"-",90763,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T002","Zm00001d032520",null,229238341,229243660,"-",89513,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T003","Zm00001d032520",null,229238342,229243830,"-",89514,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T001","Zm00001d032520",null,229238335,229244014,"-",89507,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T006","Zm00001d032520",null,229238438,229243808,"-",89610,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T004","Zm00001d032520",null,229238354,229243487,"-",89526,"downstream"]
["chr1","LNC_000749","XLOC_007709","lncRNA",229146725,229148827,"-","Zm00001d032520_T005","Zm00001d032520",null,229238370,229243635,"-",89542,"downstream"]
["chr1","LNC_000748","XLOC_007701","lncRNA",228539320,228546059,"-","Zm00001d032500_T001","Zm00001d032500","sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1//2.35702e-105",228443001,228447048,"-",92271,"upstream"]
["chr1","LNC_000748","XLOC_007701","lncRNA",228539320,228546059,"-","Zm00001d032500_T002","Zm00001d032500","sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1//2.35702e-105",228443001,228447048,"-",92271,"upstream"]
["chr1","LNC_000748","XLOC_007701","lncRNA",228539320,228546059,"-","Zm00001d032500_T003","Zm00001d032500","sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1//2.35702e-105",228443001,228447048,"-",92271,"upstream"]
["chr1","LNC_000748","XLOC_007701","lncRNA",228539320,228546059,"-","Zm00001d032501_T003","Zm00001d032501","sp|Q9SXA6|ENDO1_ARATH Endonuclease 1 OS=Arabidopsis thaliana GN=ENDO1 PE=1 SV=1//9.48169e-142",228551113,228552785,"-",5053,"downstream"]
["chr1","LNC_000748","XLOC_007701","lncRNA",228539320,228546059,"-","Zm00001d032501_T002","Zm00001d032501","sp|Q9SXA6|ENDO1_ARATH Endonuclease 1 OS=Arabidopsis thaliana GN=ENDO1 PE=1 SV=1//9.48169e-142",228551087,228553143,"-",5027,"downstream"]
["chr1","LNC_000748","XLOC_007701","lncRNA",228539320,228546059,"-","Zm00001d032501_T001","Zm00001d032501","sp|Q9SXA6|ENDO1_ARATH Endonuclease 1 OS=Arabidopsis thaliana GN=ENDO1 PE=1 SV=1//9.48169e-142",228550973,228553155,"-",4913,"downstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T001","Zm00001d045938",null,47945117,47954925,"-",33296,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T003","Zm00001d045938",null,47945117,47971712,"-",16509,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T002","Zm00001d045938",null,47945117,47955994,"-",32227,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T005","Zm00001d045938",null,47945117,47971767,"-",16454,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T004","Zm00001d045938",null,47945117,47971767,"-",16454,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T007","Zm00001d045938",null,47965867,47971731,"-",16490,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T006","Zm00001d045938",null,47965850,47971731,"-",16490,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T009","Zm00001d045938",null,47965870,47971767,"-",16454,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T008","Zm00001d045938",null,47965870,47971764,"-",16457,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T011","Zm00001d045938",null,47965880,47971731,"-",16490,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d027095_T001","Zm00001d027095",null,47904195,47904427,"+",83794,"downstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045937_T001","Zm00001d045937",null,47916398,47916850,"+",71371,"downstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T010","Zm00001d045938",null,47965877,47971767,"-",16454,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T012","Zm00001d045938",null,47965880,47971768,"-",16453,"upstream"]
["chr9","LNC_005999","XLOC_059862","lncRNA",47988222,47988479,"-","Zm00001d045938_T013","Zm00001d045938",null,47965886,47971007,"-",17214,"upstream"]
["chr9","LNC_005998","XLOC_059833","lncRNA",46709839,46711076,"-","Zm00001d027090_T001","Zm00001d027090",null,46802757,46802970,"-",91680,"downstream"]
["chr3","LNC_002523","XLOC_025132","lncRNA",54431979,54432453,"-","Zm00001d040621_T002","Zm00001d040621","sp|P27898|MYBP_MAIZE Myb-related protein P OS=Zea mays GN=P PE=2 SV=1//5.96004e-61",54361997,54365806,"+",66172,"downstream"]
["chr3","LNC_002523","XLOC_025132","lncRNA",54431979,54432453,"-","Zm00001d040621_T001","Zm00001d040621","sp|P27898|MYBP_MAIZE Myb-related protein P OS=Zea mays GN=P PE=2 SV=1//5.96004e-61",54361997,54365770,"+",66208,"downstream"]
["chr3","LNC_002523","XLOC_025132","lncRNA",54431979,54432453,"-","Zm00001d040622_T001","Zm00001d040622",null,54366428,54368879,"-",63099,"upstream"]
["chr3","LNC_002522","XLOC_025130","lncRNA",54335782,54336077,"-","Zm00001d040621_T002","Zm00001d040621","sp|P27898|MYBP_MAIZE Myb-related protein P OS=Zea mays GN=P PE=2 SV=1//5.96004e-61",54361997,54365806,"+",25919,"upstream"]
["chr3","LNC_002522","XLOC_025130","lncRNA",54335782,54336077,"-","Zm00001d040621_T001","Zm00001d040621","sp|P27898|MYBP_MAIZE Myb-related protein P OS=Zea mays GN=P PE=2 SV=1//5.96004e-61",54361997,54365770,"+",25919,"upstream"]
["chr3","LNC_002522","XLOC_025130","lncRNA",54335782,54336077,"-","Zm00001d040622_T001","Zm00001d040622",null,54366428,54368879,"-",30350,"downstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040585_T001","Zm00001d040585","sp|Q84LK3|BADH2_ORYSJ Betaine aldehyde dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=BADH2 PE=1 SV=1//2.68025e-82",51589371,51590821,"+",97719,"downstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040589_T001","Zm00001d040589","sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1//8.70458e-143",51740462,51742521,"+",51668,"upstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040588_T002","Zm00001d040588","sp|B2IK81|RL15_BEII9 50S ribosomal protein L15 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplO PE=3 SV=1//7.21541e-10",51611326,51616310,"+",72230,"downstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040584_T008","Zm00001d040584","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//1.2258e-20",51590568,51598500,"-",90040,"upstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040584_T003","Zm00001d040584","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//1.2258e-20",51573436,51598500,"-",90040,"upstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040584_T002","Zm00001d040584","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//1.2258e-20",51573436,51597719,"-",90821,"upstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040588_T005","Zm00001d040588","sp|B2IK81|RL15_BEII9 50S ribosomal protein L15 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplO PE=3 SV=1//7.21541e-10",51611648,51616310,"+",72230,"downstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040588_T004","Zm00001d040588","sp|B2IK81|RL15_BEII9 50S ribosomal protein L15 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplO PE=3 SV=1//7.21541e-10",51611355,51616382,"+",72158,"downstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040588_T003","Zm00001d040588","sp|B2IK81|RL15_BEII9 50S ribosomal protein L15 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplO PE=3 SV=1//7.21541e-10",51611330,51616372,"+",72168,"downstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040584_T006","Zm00001d040584","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//1.2258e-20",51574451,51597719,"-",90821,"upstream"]
["chr3","LNC_002521","XLOC_025106","lncRNA",51688541,51688793,"-","Zm00001d040588_T001","Zm00001d040588","sp|B2IK81|RL15_BEII9 50S ribosomal protein L15 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplO PE=3 SV=1//7.21541e-10",51611323,51616452,"+",72088,"downstream"]
["chr3","LNC_002520","XLOC_025103","lncRNA",51382928,51383785,"-","Zm00001d040581_T001","Zm00001d040581","sp|Q9FEQ8|PER2_MAIZE Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1//4.23843e-71",51339912,51341352,"+",41575,"downstream"]
["chr3","LNC_002527","XLOC_025152","lncRNA",56818697,56818921,"-","Zm00001d040656_T001","Zm00001d040656","sp|Q84WN3|SWT17_ARATH Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=2 SV=2//3.05267e-60",56766328,56774054,"+",44642,"downstream"]
["chr3","LNC_002527","XLOC_025152","lncRNA",56818697,56818921,"-","Zm00001d040656_T003","Zm00001d040656","sp|Q84WN3|SWT17_ARATH Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=2 SV=2//3.05267e-60",56770601,56771467,"+",47229,"downstream"]
["chr3","LNC_002527","XLOC_025152","lncRNA",56818697,56818921,"-","Zm00001d040656_T002","Zm00001d040656","sp|Q84WN3|SWT17_ARATH Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=2 SV=2//3.05267e-60",56766328,56774152,"+",44544,"downstream"]
["chr3","LNC_002527","XLOC_025152","lncRNA",56818697,56818921,"-","Zm00001d040659_T001","Zm00001d040659","sp|P46522|LEA5D_GOSHI Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1//1.62219e-09",56852785,56854547,"-",33863,"downstream"]
["chr3","LNC_002527","XLOC_025152","lncRNA",56818697,56818921,"-","Zm00001d040657_T001","Zm00001d040657","sp|Q949N0|NAC53_ARATH NAC domain-containing protein 53 OS=Arabidopsis thaliana GN=NAC053 PE=2 SV=1//2.71852e-22",56843809,56844336,"+",24887,"upstream"]
["chr3","LNC_002526","XLOC_025141","lncRNA",55169834,55170220,"-","Zm00001d040629_T003","Zm00001d040629","sp|Q8L7R3|LPCT1_ARATH Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1//1.94377e-127",55076674,55088155,"-",81678,"upstream"]
["chr3","LNC_002526","XLOC_025141","lncRNA",55169834,55170220,"-","Zm00001d040629_T002","Zm00001d040629","sp|Q8L7R3|LPCT1_ARATH Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1//1.94377e-127",55075888,55088174,"-",81659,"upstream"]
["chr3","LNC_002526","XLOC_025141","lncRNA",55169834,55170220,"-","Zm00001d040629_T001","Zm00001d040629","sp|Q8L7R3|LPCT1_ARATH Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1//1.94377e-127",55075888,55088152,"-",81681,"upstream"]
["chr3","LNC_002526","XLOC_025141","lncRNA",55169834,55170220,"-","Zm00001d040630_T001","Zm00001d040630","sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2//1.9106e-09",55088527,55091474,"+",78359,"downstream"]
["chr3","LNC_002525","XLOC_025140","lncRNA",55114522,55114815,"-","Zm00001d040629_T003","Zm00001d040629","sp|Q8L7R3|LPCT1_ARATH Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1//1.94377e-127",55076674,55088155,"-",26366,"upstream"]
["chr3","LNC_002525","XLOC_025140","lncRNA",55114522,55114815,"-","Zm00001d040629_T002","Zm00001d040629","sp|Q8L7R3|LPCT1_ARATH Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1//1.94377e-127",55075888,55088174,"-",26347,"upstream"]
["chr3","LNC_002525","XLOC_025140","lncRNA",55114522,55114815,"-","Zm00001d040629_T001","Zm00001d040629","sp|Q8L7R3|LPCT1_ARATH Lysophospholipid acyltransferase LPEAT1 OS=Arabidopsis thaliana GN=LPEAT1 PE=1 SV=1//1.94377e-127",55075888,55088152,"-",26369,"upstream"]
["chr3","LNC_002525","XLOC_025140","lncRNA",55114522,55114815,"-","Zm00001d040628_T001","Zm00001d040628",null,55023821,55026070,"+",88451,"downstream"]
["chr3","LNC_002525","XLOC_025140","lncRNA",55114522,55114815,"-","Zm00001d040628_T002","Zm00001d040628",null,55024722,55026070,"+",88451,"downstream"]
["chr3","LNC_002525","XLOC_025140","lncRNA",55114522,55114815,"-","Zm00001d040628_T003","Zm00001d040628",null,55024768,55025942,"+",88579,"downstream"]
["chr3","LNC_002525","XLOC_025140","lncRNA",55114522,55114815,"-","Zm00001d040630_T001","Zm00001d040630","sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2//1.9106e-09",55088527,55091474,"+",23047,"downstream"]
["chr3","LNC_002524","XLOC_025135","lncRNA",54509536,54509771,"-","Zm00001d040623_T001","Zm00001d040623",null,54606634,54607098,"-",96862,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040717_T001","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836378,59845920,"+",29653,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040717_T003","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836378,59845920,"+",29653,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040717_T002","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836378,59845920,"+",29653,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040717_T005","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836393,59845793,"+",29780,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040717_T004","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836393,59843021,"+",32552,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040717_T007","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836792,59838272,"+",37301,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040717_T006","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836437,59844588,"+",30985,"downstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040721_T001","Zm00001d040721","sp|Q9M5K3|DLDH1_ARATH Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2//0",59860481,59869514,"-",6059,"upstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040721_T002","Zm00001d040721","sp|Q9M5K3|DLDH1_ARATH Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2//0",59860481,59869531,"-",6042,"upstream"]
["chr3","LNC_002529","XLOC_025182","lncRNA",59875574,59875813,"-","Zm00001d040720_T001","Zm00001d040720",null,59856753,59860252,"+",15321,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040717_T001","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836378,59845920,"+",4750,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040717_T003","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836378,59845920,"+",4750,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040717_T002","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836378,59845920,"+",4750,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040717_T005","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836393,59845793,"+",4877,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040717_T004","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836393,59843021,"+",7649,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040717_T007","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836792,59838272,"+",12398,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040717_T006","Zm00001d040717","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//1.57272e-14",59836437,59844588,"+",6082,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040721_T001","Zm00001d040721","sp|Q9M5K3|DLDH1_ARATH Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2//0",59860481,59869514,"-",9397,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040721_T002","Zm00001d040721","sp|Q9M5K3|DLDH1_ARATH Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2//0",59860481,59869531,"-",9397,"downstream"]
["chr3","LNC_002528","XLOC_025180","lncRNA",59850671,59851083,"-","Zm00001d040720_T001","Zm00001d040720",null,59856753,59860252,"+",5669,"upstream"]
["chr4","LNC_003133","XLOC_031180","lncRNA",19353690,19353965,"-","Zm00001d049178_T001","Zm00001d049178",null,19296978,19299347,"-",54342,"upstream"]
["chr4","LNC_003133","XLOC_031180","lncRNA",19353690,19353965,"-","Zm00001d049180_T001","Zm00001d049180",null,19415550,19415990,"+",61584,"upstream"]
["chr4","LNC_003133","XLOC_031180","lncRNA",19353690,19353965,"-","Zm00001d049179_T002","Zm00001d049179","sp|B1P123|BX7_MAIZE TRIBOA-glucoside O-methyltransferase BX7 OS=Zea mays GN=BX7 PE=1 SV=1//0",19409404,19410924,"+",55438,"upstream"]
["chr4","LNC_003133","XLOC_031180","lncRNA",19353690,19353965,"-","Zm00001d049177_T001","Zm00001d049177",null,19295286,19295790,"+",57899,"downstream"]
["chr4","LNC_003133","XLOC_031180","lncRNA",19353690,19353965,"-","Zm00001d049179_T001","Zm00001d049179","sp|B1P123|BX7_MAIZE TRIBOA-glucoside O-methyltransferase BX7 OS=Zea mays GN=BX7 PE=1 SV=1//0",19409404,19410790,"+",55438,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T008","Zm00001d049153",null,17984031,17992241,"+",26217,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T009","Zm00001d049153",null,17984078,17992302,"+",26264,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T006","Zm00001d049153",null,17983937,17992461,"+",26123,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T007","Zm00001d049153",null,17983937,17992461,"+",26123,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T005","Zm00001d049153",null,17983937,17991412,"+",26123,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T002","Zm00001d049153",null,17983891,17992303,"+",26077,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T003","Zm00001d049153",null,17983935,17992336,"+",26121,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049153_T010","Zm00001d049153",null,17984085,17991399,"+",26271,"upstream"]
["chr4","LNC_003132","XLOC_031165","lncRNA",17957281,17957813,"-","Zm00001d049152_T001","Zm00001d049152",null,17892779,17899598,"-",57682,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T008","Zm00001d049153",null,17984031,17992241,"+",35334,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T009","Zm00001d049153",null,17984078,17992302,"+",35381,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T006","Zm00001d049153",null,17983937,17992461,"+",35240,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T007","Zm00001d049153",null,17983937,17992461,"+",35240,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T005","Zm00001d049153",null,17983937,17991412,"+",35240,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T002","Zm00001d049153",null,17983891,17992303,"+",35194,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T003","Zm00001d049153",null,17983935,17992336,"+",35238,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049153_T010","Zm00001d049153",null,17984085,17991399,"+",35388,"upstream"]
["chr4","LNC_003131","XLOC_031164","lncRNA",17947541,17948696,"-","Zm00001d049152_T001","Zm00001d049152",null,17892779,17899598,"-",47942,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T008","Zm00001d049153",null,17984031,17992241,"+",57017,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T009","Zm00001d049153",null,17984078,17992302,"+",57064,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T006","Zm00001d049153",null,17983937,17992461,"+",56923,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T007","Zm00001d049153",null,17983937,17992461,"+",56923,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T005","Zm00001d049153",null,17983937,17991412,"+",56923,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T002","Zm00001d049153",null,17983891,17992303,"+",56877,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T003","Zm00001d049153",null,17983935,17992336,"+",56921,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049153_T010","Zm00001d049153",null,17984085,17991399,"+",57071,"upstream"]
["chr4","LNC_003130","XLOC_031156","lncRNA",17926721,17927013,"-","Zm00001d049152_T001","Zm00001d049152",null,17892779,17899598,"-",27122,"upstream"]
["chr4","LNC_003137","XLOC_031226","lncRNA",23081006,23081495,"-","Zm00001d026764_T001","Zm00001d026764",null,22997074,22997506,"+",83499,"downstream"]
["chr4","LNC_003137","XLOC_031226","lncRNA",23081006,23081495,"-","Zm00001d049255_T001","Zm00001d049255","sp|Q9SD82|RFA1B_ARATH Replication protein A 70 kDa DNA-binding subunit B OS=Arabidopsis thaliana GN=RPA1B PE=3 SV=1//8.94153e-12",23001557,23003585,"-",77420,"upstream"]
["chr4","LNC_003137","XLOC_031226","lncRNA",23081006,23081495,"-","Zm00001d049256_T001","Zm00001d049256",null,23084615,23087441,"-",3119,"downstream"]
["chr4","LNC_003136","XLOC_031215","lncRNA",22486292,22486570,"-","Zm00001d049243_T001","Zm00001d049243","sp|P04700|ZEAX_MAIZE Zein-alpha PZ22.1/22A1 OS=Zea mays PE=2 SV=1//8.05745e-114",22579361,22580152,"-",92790,"downstream"]
["chr4","LNC_003136","XLOC_031215","lncRNA",22486292,22486570,"-","Zm00001d049242_T001","Zm00001d049242",null,22485112,22485966,"+",325,"downstream"]
["chr4","LNC_003136","XLOC_031215","lncRNA",22486292,22486570,"-","Zm00001d049241_T001","Zm00001d049241",null,22433030,22435378,"+",50913,"downstream"]
["chr4","LNC_003136","XLOC_031215","lncRNA",22486292,22486570,"-","Zm00001d049240_T001","Zm00001d049240","sp|O04846|ATCA1_ARATH Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=2//7.92818e-62",22429721,22431457,"-",54834,"upstream"]
["chr4","LNC_003135","XLOC_031209","lncRNA",21955308,21955564,"-","Zm00001d049233_T001","Zm00001d049233","sp|Q9SRY3|RLF1_ARATH Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1//2.77462e-19",21990923,21991252,"+",35358,"upstream"]
["chr4","LNC_003135","XLOC_031209","lncRNA",21955308,21955564,"-","Zm00001d049231_T001","Zm00001d049231","sp|Q65X23|WNK2_ORYSJ Probable serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica GN=WNK2 PE=2 SV=1//2.09967e-133",21926866,21928847,"+",26460,"downstream"]
["chr4","LNC_003135","XLOC_031209","lncRNA",21955308,21955564,"-","Zm00001d049232_T002","Zm00001d049232",null,21985960,21989985,"+",30395,"upstream"]
["chr4","LNC_003135","XLOC_031209","lncRNA",21955308,21955564,"-","Zm00001d049234_T001","Zm00001d049234","sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1//0",22022728,22027004,"-",67163,"downstream"]
["chr4","LNC_003135","XLOC_031209","lncRNA",21955308,21955564,"-","Zm00001d049232_T001","Zm00001d049232",null,21985960,21989783,"+",30395,"upstream"]
["chr4","LNC_003134","XLOC_031181","lncRNA",19355095,19355553,"-","Zm00001d049178_T001","Zm00001d049178",null,19296978,19299347,"-",55747,"upstream"]
["chr4","LNC_003134","XLOC_031181","lncRNA",19355095,19355553,"-","Zm00001d049180_T001","Zm00001d049180",null,19415550,19415990,"+",59996,"upstream"]
["chr4","LNC_003134","XLOC_031181","lncRNA",19355095,19355553,"-","Zm00001d049179_T002","Zm00001d049179","sp|B1P123|BX7_MAIZE TRIBOA-glucoside O-methyltransferase BX7 OS=Zea mays GN=BX7 PE=1 SV=1//0",19409404,19410924,"+",53850,"upstream"]
["chr4","LNC_003134","XLOC_031181","lncRNA",19355095,19355553,"-","Zm00001d049177_T001","Zm00001d049177",null,19295286,19295790,"+",59304,"downstream"]
["chr4","LNC_003134","XLOC_031181","lncRNA",19355095,19355553,"-","Zm00001d049179_T001","Zm00001d049179","sp|B1P123|BX7_MAIZE TRIBOA-glucoside O-methyltransferase BX7 OS=Zea mays GN=BX7 PE=1 SV=1//0",19409404,19410790,"+",53850,"upstream"]
["chr4","LNC_003139","XLOC_031236","lncRNA",24318940,24319244,"-","Zm00001d049283_T001","Zm00001d049283",null,24390317,24390898,"-",71072,"downstream"]
["chr4","LNC_003139","XLOC_031236","lncRNA",24318940,24319244,"-","Zm00001d049284_T002","Zm00001d049284",null,24392457,24396837,"+",73212,"upstream"]
["chr4","LNC_003139","XLOC_031236","lncRNA",24318940,24319244,"-","Zm00001d049284_T001","Zm00001d049284",null,24392457,24396837,"+",73212,"upstream"]
["chr4","LNC_003139","XLOC_031236","lncRNA",24318940,24319244,"-","Zm00001d049282_T001","Zm00001d049282","sp|Q9SCP6|U73D1_ARATH UDP-glycosyltransferase 73D1 OS=Arabidopsis thaliana GN=UGT73D1 PE=3 SV=1//1.22996e-48",24379653,24381203,"+",60408,"upstream"]
["chr4","LNC_003139","XLOC_031236","lncRNA",24318940,24319244,"-","Zm00001d049277_T001","Zm00001d049277","sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1//3.69701e-48",24284053,24290303,"+",28636,"downstream"]
["chr4","LNC_003139","XLOC_031236","lncRNA",24318940,24319244,"-","Zm00001d049285_T001","Zm00001d049285","sp|C5Y376|CSPLB_SORBI CASP-like protein 1U2 OS=Sorghum bicolor GN=Sb05g019440 PE=2 SV=1//2.71359e-62",24400546,24401198,"-",81301,"downstream"]
["chr4","LNC_003138","XLOC_031235","lncRNA",23960282,23960541,"-","Zm00001d049273_T001","Zm00001d049273","sp|Q8RWD5|SCD2_ARATH Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana GN=SCD2 PE=1 SV=1//6.07722e-114",23998240,24004490,"+",37698,"upstream"]
["chr4","LNC_003138","XLOC_031235","lncRNA",23960282,23960541,"-","Zm00001d049270_T001","Zm00001d049270","sp|P36623|PMGY_SCHPO Phosphoglycerate mutase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpm1 PE=1 SV=1//2.13025e-07",23889240,23892407,"+",67874,"downstream"]
["chr4","LNC_003138","XLOC_031235","lncRNA",23960282,23960541,"-","Zm00001d049270_T002","Zm00001d049270","sp|P36623|PMGY_SCHPO Phosphoglycerate mutase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpm1 PE=1 SV=1//2.13025e-07",23889240,23899918,"+",60363,"downstream"]
["chr8","LNC_005199","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005199","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005199","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005199","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005199","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59689,"downstream"]
["chr8","LNC_005199","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005199","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005198","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005198","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005198","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005198","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005198","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59689,"downstream"]
["chr8","LNC_005198","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005198","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005193","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005193","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005193","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005193","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005193","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59687,"downstream"]
["chr8","LNC_005193","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005193","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005192","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005192","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005192","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005192","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005192","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59685,"downstream"]
["chr8","LNC_005192","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005192","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005191","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005191","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005191","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005191","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005191","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59685,"downstream"]
["chr8","LNC_005191","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005191","XLOC_052079","lncRNA",69305025,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005190","XLOC_052079","lncRNA",69304965,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005190","XLOC_052079","lncRNA",69304965,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005190","XLOC_052079","lncRNA",69304965,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005190","XLOC_052079","lncRNA",69304965,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005190","XLOC_052079","lncRNA",69304965,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59625,"downstream"]
["chr8","LNC_005190","XLOC_052079","lncRNA",69304965,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005190","XLOC_052079","lncRNA",69304965,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005197","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005197","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005197","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005197","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005197","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59689,"downstream"]
["chr8","LNC_005197","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005197","XLOC_052079","lncRNA",69305029,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005196","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005196","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005196","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005196","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005196","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59687,"downstream"]
["chr8","LNC_005196","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005196","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005195","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005195","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005195","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005195","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005195","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59687,"downstream"]
["chr8","LNC_005195","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005195","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr8","LNC_005194","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T001","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69412966,"-",83481,"downstream"]
["chr8","LNC_005194","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T001","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393483,"+",78266,"upstream"]
["chr8","LNC_005194","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009539_T002","Zm00001d009539","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//0",69390011,69393490,"+",78266,"upstream"]
["chr8","LNC_005194","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009540_T001","Zm00001d009540",null,69394589,69394972,"+",82844,"upstream"]
["chr8","LNC_005194","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009533_T001","Zm00001d009533","sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1//1.585e-16",69244325,69245339,"+",59687,"downstream"]
["chr8","LNC_005194","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009538_T001","Zm00001d009538",null,69358258,69358803,"-",46513,"downstream"]
["chr8","LNC_005194","XLOC_052079","lncRNA",69305027,69311744,"+","Zm00001d009541_T002","Zm00001d009541","sp|Q0WVL7|GOGC5_ARATH Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1//0",69395226,69413106,"-",83481,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T004","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227328765,"+",50514,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044407_T001","Zm00001d044407",null,227367681,227371262,"+",8017,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044407_T003","Zm00001d044407",null,227367681,227371262,"+",8017,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044406_T001","Zm00001d044406","sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2//7.18388e-150",227343296,227344737,"-",34542,"upstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T018","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320635,227328765,"+",50514,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044411_T001","Zm00001d044411","sp|Q5ZD81|CML12_ORYSJ Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica GN=CML12 PE=2 SV=1//5.56199e-74",227442004,227442708,"-",62431,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T014","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320399,227324539,"+",54740,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T015","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320495,227324576,"+",54703,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T017","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320635,227328524,"+",50755,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T010","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319695,227328421,"+",50858,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T012","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319718,227324576,"+",54703,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T013","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319748,227324573,"+",54706,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044410_T001","Zm00001d044410",null,227435951,227437216,"-",56378,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044407_T006","Zm00001d044407",null,227367793,227371229,"+",8050,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044409_T001","Zm00001d044409","sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1//3.47917e-23",227433298,227435079,"+",53725,"upstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044412_T003","Zm00001d044412",null,227443749,227447568,"-",64176,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044412_T002","Zm00001d044412",null,227443747,227447572,"-",64174,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044412_T001","Zm00001d044412",null,227443732,227447458,"-",64159,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T009","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319695,227328355,"+",50924,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T008","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319660,227328392,"+",50887,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T007","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319549,227324547,"+",54732,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T005","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319436,227324573,"+",54706,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044402_T001","Zm00001d044402","sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2//1.23064e-171",227279692,227280658,"+",98621,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T003","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227328765,"+",50514,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T002","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227328765,"+",50514,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044405_T001","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227324579,"+",54700,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044403_T001","Zm00001d044403","sp|O23492|INT4_ARATH Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1//6.13175e-61",227292558,227294312,"-",84967,"upstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044407_T004","Zm00001d044407",null,227367732,227368905,"+",10374,"downstream"]
["chr3","LNC_002428","XLOC_024110","lncRNA",227379280,227379572,"+","Zm00001d044404_T001","Zm00001d044404","sp|Q9LFV6|RPOT2_ARATH DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=RPOT2 PE=1 SV=1//3.49485e-64",227295424,227296435,"+",82844,"downstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044412_T003","Zm00001d044412",null,227443749,227447568,"-",90412,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044412_T002","Zm00001d044412",null,227443747,227447572,"-",90408,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044412_T001","Zm00001d044412",null,227443732,227447458,"-",90522,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044415_T001","Zm00001d044415","sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2//1.06206e-16",227490616,227495187,"-",42793,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044411_T001","Zm00001d044411","sp|Q5ZD81|CML12_ORYSJ Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica GN=CML12 PE=2 SV=1//5.56199e-74",227442004,227442708,"-",95272,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044421_T001","Zm00001d044421","sp|A2WSD3|SWT6B_ORYSI Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica GN=SWEET6B PE=3 SV=1//8.85745e-129",227515476,227518586,"+",19394,"downstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044415_T003","Zm00001d044415","sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2//1.06206e-16",227493599,227495130,"-",42850,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044414_T001","Zm00001d044414",null,227490226,227490299,"-",47681,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044415_T002","Zm00001d044415","sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2//1.06206e-16",227493569,227495187,"-",42793,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044416_T001","Zm00001d044416","sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1//6.9611e-35",227491480,227493229,"+",44751,"downstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044419_T001","Zm00001d044419","sp|Q9LFS2|GEX3_ARATH Protein GAMETE EXPRESSED 3 OS=Arabidopsis thaliana GN=GEX3 PE=2 SV=1//1.45419e-117",227503967,227507148,"+",30832,"downstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044425_T001","Zm00001d044425",null,227598222,227599196,"-",60006,"downstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044413_T001","Zm00001d044413",null,227489259,227489329,"+",48651,"downstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044420_T001","Zm00001d044420","sp|Q2TAC6|KIF19_HUMAN Kinesin-like protein KIF19 OS=Homo sapiens GN=KIF19 PE=2 SV=2//9.47034e-91",227506923,227511292,"-",26688,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044423_T001","Zm00001d044423",null,227583900,227584274,"+",45684,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044418_T001","Zm00001d044418","sp|Q941B6|UBC37_ARATH Probable ubiquitin-conjugating enzyme E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=2//1.1093e-78",227499878,227503129,"+",34851,"downstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044422_T001","Zm00001d044422",null,227572095,227574742,"+",33879,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044417_T001","Zm00001d044417","sp|Q8K3A0|HSC20_MOUSE Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Mus musculus GN=Hscb PE=2 SV=2//9.84141e-37",227495710,227499719,"-",38261,"upstream"]
["chr3","LNC_002429","XLOC_024117","lncRNA",227537981,227538215,"+","Zm00001d044422_T002","Zm00001d044422",null,227572162,227574742,"+",33946,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044375_T001","Zm00001d044375",null,226411955,226413242,"-",2485,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T005","Zm00001d044379",null,226473961,226482463,"+",64491,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T007","Zm00001d044379",null,226473977,226480603,"+",64507,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T006","Zm00001d044379",null,226473961,226482614,"+",64491,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T001","Zm00001d044379",null,226473959,226480603,"+",64489,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T003","Zm00001d044379",null,226473959,226482614,"+",64489,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T002","Zm00001d044379",null,226473959,226482507,"+",64489,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T009","Zm00001d044379",null,226477249,226480603,"+",67779,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T008","Zm00001d044379",null,226474008,226482560,"+",64538,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044378_T001","Zm00001d044378",null,226469844,226470898,"-",60374,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044380_T001","Zm00001d044380","sp|P0C1M0|ATPG_MAIZE ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1//1.92688e-10",226483219,226483716,"-",73749,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044376_T001","Zm00001d044376",null,226415790,226416996,"-",6320,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044377_T001","Zm00001d044377","sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1 OS=Arabidopsis thaliana GN=PAPS1 PE=1 SV=1//2.47202e-54",226463068,226464394,"-",53598,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044370_T001","Zm00001d044370",null,226330737,226331378,"-",77830,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044374_T001","Zm00001d044374",null,226363228,226365057,"-",44151,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T010","Zm00001d044379",null,226477818,226482590,"+",68348,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T011","Zm00001d044379",null,226477865,226482507,"+",68395,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044372_T001","Zm00001d044372","sp|Q9LHF1|LRX4_ARATH Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=LRX4 PE=2 SV=1//7.14387e-139",226336386,226338243,"-",70965,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044381_T001","Zm00001d044381","sp|Q54IH8|NDRB_DICDI Probable serine/threonine-protein kinase ndrB OS=Dictyostelium discoideum GN=ndrB PE=3 SV=1//6.19964e-08",226483766,226485051,"+",74296,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044367_T002","Zm00001d044367","sp|Q55E69|SYS1_DICDI Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1//3.91278e-33",226310444,226315323,"+",93885,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044367_T001","Zm00001d044367","sp|Q55E69|SYS1_DICDI Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1//3.91278e-33",226310412,226315341,"+",93867,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044379_T004","Zm00001d044379",null,226473959,226482614,"+",64489,"upstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044368_T001","Zm00001d044368","sp|O34569|YOAA_BACSU Uncharacterized N-acetyltransferase YoaA OS=Bacillus subtilis (strain 168) GN=yoaA PE=3 SV=2//1.72087e-13",226325648,226326241,"+",82967,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044371_T001","Zm00001d044371",null,226331492,226333036,"+",76172,"downstream"]
["chr3","LNC_002426","XLOC_024081","lncRNA",226409209,226409469,"+","Zm00001d044373_T001","Zm00001d044373","sp|Q9LHF1|LRX4_ARATH Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=LRX4 PE=2 SV=1//8.4579e-138",226336497,226338425,"+",70783,"downstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T004","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227328765,"+",17059,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044407_T001","Zm00001d044407",null,227367681,227371262,"+",65310,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044407_T003","Zm00001d044407",null,227367681,227371262,"+",65310,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044406_T001","Zm00001d044406","sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2//7.18388e-150",227343296,227344737,"-",40925,"downstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T018","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320635,227328765,"+",18264,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T014","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320399,227324539,"+",18028,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T015","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320495,227324576,"+",18124,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T017","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227320635,227328524,"+",18264,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T010","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319695,227328421,"+",17324,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T012","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319718,227324576,"+",17347,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T013","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319748,227324573,"+",17377,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044407_T006","Zm00001d044407",null,227367793,227371229,"+",65422,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T009","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319695,227328355,"+",17324,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T008","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319660,227328392,"+",17289,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T007","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319549,227324547,"+",17178,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T005","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319436,227324573,"+",17065,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044402_T001","Zm00001d044402","sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2//1.23064e-171",227279692,227280658,"+",21486,"downstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T003","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227328765,"+",17059,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T002","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227328765,"+",17059,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044405_T001","Zm00001d044405","sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1//6.22452e-91",227319430,227324579,"+",17059,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044403_T001","Zm00001d044403","sp|O23492|INT4_ARATH Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1//6.13175e-61",227292558,227294312,"-",7832,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044407_T004","Zm00001d044407",null,227367732,227368905,"+",65361,"upstream"]
["chr3","LNC_002427","XLOC_024102","lncRNA",227302145,227302370,"+","Zm00001d044404_T001","Zm00001d044404","sp|Q9LFV6|RPOT2_ARATH DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=RPOT2 PE=1 SV=1//3.49485e-64",227295424,227296435,"+",5709,"downstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T008","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T009","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T010","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T013","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225850852,225863822,"-",92029,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T001","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T002","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T003","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T004","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T005","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T006","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T007","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044359_T001","Zm00001d044359",null,225991448,225991898,"+",35336,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T014","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225861427,225863873,"-",91978,"upstream"]
["chr3","LNC_002424","XLOC_024069","lncRNA",225955852,225956111,"+","Zm00001d044358_T011","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",91978,"upstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044364_T005","Zm00001d044364","sp|E1BLZ4|ZFY26_BOVIN Zinc finger FYVE domain-containing protein 26 OS=Bos taurus GN=ZFYVE26 PE=3 SV=1//2.11346e-30",226146845,226225366,"+",61668,"upstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044364_T004","Zm00001d044364","sp|E1BLZ4|ZFY26_BOVIN Zinc finger FYVE domain-containing protein 26 OS=Bos taurus GN=ZFYVE26 PE=3 SV=1//2.11346e-30",226146845,226222831,"+",61668,"upstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044364_T002","Zm00001d044364","sp|E1BLZ4|ZFY26_BOVIN Zinc finger FYVE domain-containing protein 26 OS=Bos taurus GN=ZFYVE26 PE=3 SV=1//2.11346e-30",226146845,226225366,"+",61668,"upstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044364_T001","Zm00001d044364","sp|E1BLZ4|ZFY26_BOVIN Zinc finger FYVE domain-containing protein 26 OS=Bos taurus GN=ZFYVE26 PE=3 SV=1//2.11346e-30",226157108,226225366,"+",71931,"upstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044362_T001","Zm00001d044362","sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2//2.36366e-53",226115016,226115588,"-",29839,"downstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044359_T001","Zm00001d044359",null,225991448,225991898,"+",92976,"downstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044363_T002","Zm00001d044363",null,226147197,226155647,"+",62020,"upstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044363_T003","Zm00001d044363",null,226147197,226155647,"+",62020,"upstream"]
["chr3","LNC_002425","XLOC_024072","lncRNA",226084875,226085176,"+","Zm00001d044363_T001","Zm00001d044363",null,226147197,226155647,"+",62020,"upstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044348_T002","Zm00001d044348",null,225602254,225603239,"-",78856,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T008","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447348,225451949,"+",71207,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T009","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447363,225451954,"+",71202,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T006","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447318,225452147,"+",71009,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T007","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447333,225451948,"+",71208,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T004","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447318,225452147,"+",71009,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T005","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447318,225452147,"+",71009,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T002","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447318,225452147,"+",71009,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T003","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447318,225452147,"+",71009,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T001","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447318,225451949,"+",71207,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044344_T001","Zm00001d044344","sp|Q9LSD5|TCP20_ARATH Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1//1.43494e-16",225528269,225529761,"+",4871,"upstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044340_T001","Zm00001d044340","sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2//0",225468766,225476879,"+",46277,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044343_T001","Zm00001d044343","sp|Q0J4I1|CKB21_ORYSJ Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1//1.18069e-64",225524848,225526211,"-",1450,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d000718_T001","Zm00001d000718",null,225463716,225464518,"+",58638,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044342_T004","Zm00001d044342","sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1//1.43871e-49",225515419,225519609,"-",3547,"upstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T019","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447706,225451575,"+",71581,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T018","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447703,225451930,"+",71226,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044348_T001","Zm00001d044348",null,225602227,225603386,"-",78829,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T011","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447422,225452146,"+",71010,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T010","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447389,225451927,"+",71229,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T013","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447428,225451949,"+",71207,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T012","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447422,225452279,"+",70877,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T015","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447486,225451952,"+",71204,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T014","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447486,225451949,"+",71207,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T017","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447698,225451949,"+",71207,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044338_T016","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447503,225451947,"+",71209,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044342_T003","Zm00001d044342","sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1//1.43871e-49",225515419,225519609,"-",3547,"upstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044342_T002","Zm00001d044342","sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1//1.43871e-49",225515419,225519609,"-",3547,"upstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044342_T001","Zm00001d044342","sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1//1.43871e-49",225515419,225517968,"-",5188,"upstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044345_T001","Zm00001d044345",null,225530008,225530707,"-",6610,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044342_T005","Zm00001d044342","sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1//1.43871e-49",225515419,225519609,"-",3547,"upstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044341_T001","Zm00001d044341",null,225471793,225471874,"+",51282,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044339_T001","Zm00001d044339","sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2//0",225456709,225460590,"+",62566,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044339_T003","Zm00001d044339","sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2//0",225456709,225460729,"+",62427,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044339_T002","Zm00001d044339","sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2//0",225456709,225460644,"+",62512,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044339_T005","Zm00001d044339","sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2//0",225458487,225460638,"+",62518,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044339_T004","Zm00001d044339","sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2//0",225456709,225460729,"+",62427,"downstream"]
["chr3","LNC_002422","XLOC_024062","lncRNA",225523157,225523397,"+","Zm00001d044339_T006","Zm00001d044339","sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2//0",225458668,225460720,"+",62436,"downstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T008","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T009","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T010","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T013","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225850852,225863822,"-",90440,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T001","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T002","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T003","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T004","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T005","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T006","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T007","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225841652,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044359_T001","Zm00001d044359",null,225991448,225991898,"+",36665,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T014","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225861427,225863873,"-",90389,"upstream"]
["chr3","LNC_002423","XLOC_024068","lncRNA",225954263,225954782,"+","Zm00001d044358_T011","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",225847968,225863873,"-",90389,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T025","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978079,224011903,"+",80028,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T024","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978079,224011903,"+",80028,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T033","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978095,224011952,"+",80044,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T030","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978091,224011903,"+",80040,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T031","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978091,224011903,"+",80040,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T018","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,224011947,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T019","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,224011947,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T034","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978112,224007789,"+",80061,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T036","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978128,224011904,"+",80077,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T037","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978784,223981409,"+",80733,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T012","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,223990496,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T013","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,224011903,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T010","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,223981409,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T011","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,223981409,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T016","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,224011939,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T017","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,224011947,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T014","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,224011903,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T015","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978012,224011916,"+",79961,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T041","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978947,224011953,"+",80896,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T040","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978942,224011903,"+",80891,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T038","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978784,224011903,"+",80733,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T042","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978991,224011903,"+",80940,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T044","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223979397,224011844,"+",81346,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T046","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223979775,224011826,"+",81724,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T049","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223980185,224011904,"+",82134,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T048","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223979791,224011914,"+",81740,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T027","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978083,224011842,"+",80032,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044280_T001","Zm00001d044280","sp|Q84TA3|LKHA4_ORYSJ Leukotriene A-4 hydrolase homolog OS=Oryza sativa subsp. japonica GN=LKHA4 PE=2 SV=1//1.09662e-104",223966910,223971189,"-",68859,"downstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T039","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978784,224011947,"+",80733,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044277_T001","Zm00001d044277","sp|B4FHF0|EFTS_MAIZE Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1//4.78557e-91",223829598,223834173,"+",63597,"downstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044277_T002","Zm00001d044277","sp|B4FHF0|EFTS_MAIZE Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1//4.78557e-91",223829598,223834192,"+",63578,"downstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044277_T003","Zm00001d044277","sp|B4FHF0|EFTS_MAIZE Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1//4.78557e-91",223829598,223834192,"+",63578,"downstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044277_T004","Zm00001d044277","sp|B4FHF0|EFTS_MAIZE Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1//4.78557e-91",223829629,223833990,"+",63780,"downstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044277_T005","Zm00001d044277","sp|B4FHF0|EFTS_MAIZE Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1//4.78557e-91",223829629,223834049,"+",63721,"downstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044277_T006","Zm00001d044277","sp|B4FHF0|EFTS_MAIZE Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1//4.78557e-91",223829640,223834058,"+",63712,"downstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T005","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223977960,224011902,"+",79909,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T004","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223977960,223981409,"+",79909,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T007","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223977960,224011947,"+",79909,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T006","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223977960,224011947,"+",79909,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T001","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223977953,224011913,"+",79902,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T026","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978082,224011903,"+",80031,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T003","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223977955,224011903,"+",79904,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T002","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223977953,224011947,"+",79902,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T029","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978091,224011903,"+",80040,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T028","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978091,224011902,"+",80040,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T009","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978002,224011940,"+",79951,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T008","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978002,223989114,"+",79951,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T056","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223989283,224011923,"+",91232,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T023","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978070,223989117,"+",80019,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T054","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223987466,223989119,"+",89415,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T055","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223987495,224011903,"+",89444,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T052","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223981986,224011938,"+",83935,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T053","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223986589,224011913,"+",88538,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T050","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223981208,224011903,"+",83157,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T022","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978058,224011903,"+",80007,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T051","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223981350,224011903,"+",83299,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T021","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978057,224011904,"+",80006,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T032","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978091,224011904,"+",80040,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044281_T020","Zm00001d044281","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//9.54125e-31",223978027,224011903,"+",79976,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044278_T005","Zm00001d044278","sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2//1.37045e-11",223869830,223874157,"-",23613,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044278_T004","Zm00001d044278","sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2//1.37045e-11",223869830,223874157,"-",23613,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044278_T007","Zm00001d044278","sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2//1.37045e-11",223869876,223874133,"-",23637,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044278_T006","Zm00001d044278","sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2//1.37045e-11",223869831,223874133,"-",23637,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044278_T001","Zm00001d044278","sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2//1.37045e-11",223869824,223874133,"-",23637,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044278_T003","Zm00001d044278","sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2//1.37045e-11",223869830,223874129,"-",23641,"upstream"]
["chr3","LNC_002420","XLOC_024025","lncRNA",223897771,223898050,"+","Zm00001d044278_T002","Zm00001d044278","sp|Q8GXF0|RA51C_ARATH DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2//1.37045e-11",223869824,223874157,"-",23613,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T003","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362586,224370568,"+",77947,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T002","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362586,224370568,"+",77947,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T001","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362586,224370555,"+",77947,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T007","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362597,224370548,"+",77958,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T020","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224365345,224370568,"+",80706,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T005","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362587,224370548,"+",77948,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T004","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362586,224370568,"+",77947,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T009","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362597,224370567,"+",77958,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T029","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224366898,224370568,"+",82259,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T028","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224366898,224370568,"+",82259,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T032","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224368689,224370541,"+",84050,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T019","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224364327,224370567,"+",79688,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T009","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212972,224216726,"+",67479,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T008","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212931,224216386,"+",67819,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T001","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212852,224216709,"+",67496,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T003","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212852,224216726,"+",67479,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T002","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212852,224216726,"+",67479,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T005","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212852,224216726,"+",67479,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T004","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212852,224216726,"+",67479,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T007","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212852,224216726,"+",67479,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T006","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224212852,224216726,"+",67479,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044288_T001","Zm00001d044288",null,224349905,224352639,"+",65266,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044289_T001","Zm00001d044289",null,224353596,224360093,"-",68957,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044289_T002","Zm00001d044289",null,224353633,224357131,"-",68994,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T010","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362698,224370566,"+",78059,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T011","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362749,224368208,"+",78110,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T012","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362817,224370568,"+",78178,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T015","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362868,224370568,"+",78229,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T017","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224362943,224370548,"+",78304,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T018","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224363520,224368209,"+",78881,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044286_T001","Zm00001d044286",null,224220311,224224393,"-",59812,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T030","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224366983,224370547,"+",82344,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T031","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224367637,224370566,"+",82998,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T025","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224366184,224370568,"+",81545,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T024","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224365410,224370560,"+",80771,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044287_T002","Zm00001d044287","sp|Q9LUQ6|RL192_ARATH 60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1//5.30212e-14",224228135,224230670,"-",53535,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044287_T001","Zm00001d044287","sp|Q9LUQ6|RL192_ARATH 60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1//5.30212e-14",224227926,224230653,"-",53552,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044290_T027","Zm00001d044290","sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1//3.68747e-48",224366692,224370554,"+",82053,"upstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T014","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224213101,224216588,"+",67617,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T015","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224213101,224216725,"+",67480,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T012","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224213101,224216575,"+",67630,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T013","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224213101,224216587,"+",67618,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T010","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224213101,224216514,"+",67691,"downstream"]
["chr3","LNC_002421","XLOC_024031","lncRNA",224284206,224284638,"+","Zm00001d044285_T011","Zm00001d044285","sp|Q3HRN8|CNBL9_ORYSJ Calcineurin B-like protein 9 OS=Oryza sativa subsp. japonica GN=CBL9 PE=2 SV=2//8.05392e-14",224213101,224216534,"+",67671,"downstream"]
["chr8","LNC_005429","XLOC_054638","lncRNA",40596813,40597038,"-","Zm00001d009167_T001","Zm00001d009167","sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1//2.7208e-163",40630094,40633047,"+",33055,"upstream"]
["chr8","LNC_005429","XLOC_054638","lncRNA",40596813,40597038,"-","Zm00001d009165_T001","Zm00001d009165",null,40557977,40558258,"-",38554,"upstream"]
["chr8","LNC_005429","XLOC_054638","lncRNA",40596813,40597038,"-","Zm00001d009167_T002","Zm00001d009167","sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1//2.7208e-163",40630094,40633047,"+",33055,"upstream"]
["chr8","LNC_005429","XLOC_054638","lncRNA",40596813,40597038,"-","Zm00001d009167_T003","Zm00001d009167","sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1//2.7208e-163",40630977,40632941,"+",33938,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009149_T001","Zm00001d009149","sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1//8.33845e-14",39616534,39618846,"+",58415,"downstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009149_T002","Zm00001d009149","sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1//8.33845e-14",39617585,39618451,"+",58810,"downstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","zma-mir408b","zma-MIR408b",null,39583938,39584084,"-",93177,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009147_T002","Zm00001d009147",null,39585095,39588845,"-",88416,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009147_T001","Zm00001d009147",null,39585054,39588843,"-",88418,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T011","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615494,39626324,"-",50937,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T010","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615483,39627678,"-",49583,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T013","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615504,39627531,"-",49730,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T012","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615496,39627532,"-",49729,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T014","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39625130,39627090,"-",50171,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009150_T003","Zm00001d009150","sp|Q758M7|SEC23_ASHGO Protein transport protein SEC23 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC23 PE=3 SV=1//1.9004e-32",39635044,39636276,"+",40985,"downstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009150_T002","Zm00001d009150","sp|Q758M7|SEC23_ASHGO Protein transport protein SEC23 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC23 PE=3 SV=1//1.9004e-32",39632049,39636351,"+",40910,"downstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009150_T001","Zm00001d009150","sp|Q758M7|SEC23_ASHGO Protein transport protein SEC23 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC23 PE=3 SV=1//1.9004e-32",39632049,39636351,"+",40910,"downstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T008","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615483,39627479,"-",49782,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T009","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615483,39627532,"-",49729,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T006","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615413,39627509,"-",49752,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T007","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615483,39627167,"-",50094,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T004","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615409,39627672,"-",49589,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T005","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615409,39627678,"-",49583,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T002","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615409,39627190,"-",50071,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T003","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615409,39627554,"-",49707,"upstream"]
["chr8","LNC_005428","XLOC_054623","lncRNA",39677262,39677541,"-","Zm00001d009148_T001","Zm00001d009148","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//9.95286e-10",39615377,39627532,"-",49729,"upstream"]
["chr8","LNC_005423","XLOC_054567","lncRNA",33109095,33110099,"-","Zm00001d009047_T001","Zm00001d009047",null,33044431,33051727,"-",57367,"upstream"]
["chr8","LNC_005423","XLOC_054567","lncRNA",33109095,33110099,"-","Zm00001d009049_T001","Zm00001d009049",null,33111400,33111642,"+",1300,"upstream"]
["chr8","LNC_005422","XLOC_054564","lncRNA",31185340,31185685,"-","Zm00001d008014_T001","Zm00001d008014",null,31155861,31158152,"+",27187,"downstream"]
["chr8","LNC_005422","XLOC_054564","lncRNA",31185340,31185685,"-","Zm00001d009041_T002","Zm00001d009041",null,31182067,31184734,"-",605,"upstream"]
["chr8","LNC_005422","XLOC_054564","lncRNA",31185340,31185685,"-","Zm00001d009041_T001","Zm00001d009041",null,31177281,31183852,"-",1487,"upstream"]
["chr8","LNC_005421","XLOC_054541","lncRNA",29842931,29843774,"-","Zm00001d009007_T001","Zm00001d009007","sp|Q8GY87|UBC26_ARATH Probable ubiquitin-conjugating enzyme E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2//3.44929e-94",29784004,29790217,"+",52713,"downstream"]
["chr8","LNC_005420","XLOC_054532","lncRNA",29337590,29339037,"-","Zm00001d008999_T001","Zm00001d008999",null,29415117,29416751,"+",76079,"upstream"]
["chr8","LNC_005420","XLOC_054532","lncRNA",29337590,29339037,"-","Zm00001d008011_T001","Zm00001d008011",null,29419941,29420590,"-",80903,"downstream"]
["chr8","LNC_005420","XLOC_054532","lncRNA",29337590,29339037,"-","Zm00001d008010_T001","Zm00001d008010",null,29403162,29405957,"+",64124,"upstream"]
["chr8","LNC_005420","XLOC_054532","lncRNA",29337590,29339037,"-","Zm00001d008998_T001","Zm00001d008998",null,29412723,29414042,"+",73685,"upstream"]
["chr8","LNC_005427","XLOC_054619","lncRNA",39336630,39336970,"-","Zm00001d009144_T002","Zm00001d009144",null,39286267,39286991,"-",49638,"upstream"]
["chr8","LNC_005427","XLOC_054619","lncRNA",39336630,39336970,"-","Zm00001d009144_T001","Zm00001d009144",null,39286124,39286991,"-",49638,"upstream"]
["chr8","LNC_005427","XLOC_054619","lncRNA",39336630,39336970,"-","Zm00001d009145_T001","Zm00001d009145",null,39288232,39288716,"-",47913,"upstream"]
["chr8","LNC_005427","XLOC_054619","lncRNA",39336630,39336970,"-","Zm00001d008024_T001","Zm00001d008024",null,39421973,39422345,"+",85002,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009132_T001","Zm00001d009132",null,38686117,38690110,"-",99555,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009135_T001","Zm00001d009135",null,38701815,38702120,"-",87545,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009134_T001","Zm00001d009134","sp|Q9SJA7|SOX_ARATH Probable sarcosine oxidase OS=Arabidopsis thaliana GN=At2g24580 PE=2 SV=1//2.88023e-108",38699884,38701116,"-",88549,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009139_T001","Zm00001d009139",null,38872665,38874088,"+",82607,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009133_T001","Zm00001d009133",null,38693672,38693971,"-",95694,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009140_T001","Zm00001d009140","sp|A5H8G4|PER1_MAIZE Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1//9.94933e-134",38889088,38892860,"-",99030,"downstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009138_T001","Zm00001d009138","sp|A5H8G4|PER1_MAIZE Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1//2.75563e-110",38826801,38828721,"+",36743,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009137_T001","Zm00001d009137",null,38778738,38782518,"-",7147,"upstream"]
["chr8","LNC_005426","XLOC_054614","lncRNA",38789666,38790057,"-","Zm00001d009137_T002","Zm00001d009137",null,38778738,38782518,"-",7147,"upstream"]
["chr8","LNC_005425","XLOC_054586","lncRNA",35312549,35312984,"-","Zm00001d009081_T001","Zm00001d009081",null,35350262,35350852,"+",37277,"upstream"]
["chr8","LNC_005424","XLOC_054575","lncRNA",33880539,33880914,"-","Zm00001d009060_T001","Zm00001d009060","sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1//0",33883210,33886191,"+",2295,"upstream"]
["chr8","LNC_005424","XLOC_054575","lncRNA",33880539,33880914,"-","Zm00001d008016_T001","Zm00001d008016",null,33806530,33807235,"+",73303,"downstream"]
["chr8","LNC_005424","XLOC_054575","lncRNA",33880539,33880914,"-","Zm00001d009059_T001","Zm00001d009059","sp|Q8S4P5|EZ2_MAIZE Histone-lysine N-methyltransferase EZ2 OS=Zea mays GN=EZ2 PE=2 SV=1//2.55292e-31",33810189,33812308,"+",68230,"downstream"]
["chr8","LNC_005424","XLOC_054575","lncRNA",33880539,33880914,"-","Zm00001d009060_T002","Zm00001d009060","sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1//0",33883212,33886114,"+",2297,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037861_T001","Zm00001d037861","sp|Q2KNB5|HXK10_ORYSJ Hexokinase-10 OS=Oryza sativa subsp. japonica GN=HXK10 PE=2 SV=1//0",140078685,140083862,"+",78143,"downstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T001","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140113133,140132641,"-",29364,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T002","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140113133,140137233,"-",24772,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T003","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140113133,140137233,"-",24772,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T004","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124706,140137233,"-",24772,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T005","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124892,140137149,"-",24856,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T006","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124913,140137180,"-",24825,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T022","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140125054,140136109,"-",25896,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T026","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140130371,140137233,"-",24772,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T027","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140130380,140137252,"-",24753,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T024","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140130370,140135117,"-",26888,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T025","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140130371,140137233,"-",24772,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T028","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140130381,140137256,"-",24749,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T019","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140125051,140136032,"-",25973,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T018","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124993,140136501,"-",25504,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T012","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124961,140137192,"-",24813,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T011","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124961,140137188,"-",24817,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T031","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140134259,140137215,"-",24790,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T030","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140131772,140136225,"-",25780,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T014","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124961,140137233,"-",24772,"upstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037862_T001","Zm00001d037862","sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1//6.16932e-71",140093334,140094260,"+",67745,"downstream"]
["chr6","LNC_004248","XLOC_042787","lncRNA",140162006,140162212,"+","Zm00001d037864_T016","Zm00001d037864","sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1//4.78336e-08",140124966,140136305,"-",25700,"upstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T012","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447454,141450540,"-",77047,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T007","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447174,141450471,"-",76767,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T008","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447175,141450195,"-",76768,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T011","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447454,141450540,"-",77047,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037897_T002","Zm00001d037897",null,141442351,141445588,"-",71944,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T010","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447191,141448538,"-",76784,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T009","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447190,141450540,"-",76783,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037897_T001","Zm00001d037897",null,141442249,141445624,"-",71842,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037893_T002","Zm00001d037893","sp|Q6Z3U3|Y7797_ORYSJ B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1//4.83044e-08",141279637,141281275,"+",88911,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T005","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447173,141450482,"-",76766,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037893_T001","Zm00001d037893","sp|Q6Z3U3|Y7797_ORYSJ B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1//4.83044e-08",141279637,141281251,"+",88935,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T003","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447172,141450490,"-",76765,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T002","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447171,141450449,"-",76764,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T001","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447130,141450540,"-",76723,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037896_T001","Zm00001d037896",null,141421821,141421893,"+",51414,"upstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T006","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447173,141450536,"-",76766,"downstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037894_T001","Zm00001d037894","sp|P12950|DHN1_MAIZE Dehydrin DHN1 OS=Zea mays GN=DHN1 PE=1 SV=2//5.75723e-28",141324495,141325549,"-",44637,"upstream"]
["chr6","LNC_004249","XLOC_042796","lncRNA",141370187,141370406,"+","Zm00001d037898_T004","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447173,141449058,"-",76766,"downstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037658_T001","Zm00001d037658",null,133192852,133194981,"+",95578,"upstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037653_T001","Zm00001d037653","sp|Q7GCM7|XIP1_ORYSJ Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1//1.70753e-93",133069804,133070751,"+",23156,"downstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037651_T002","Zm00001d037651","sp|Q9MAP5|SBT33_ARATH Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana GN=SBT3.3 PE=2 SV=1//0",133037591,133043190,"+",50717,"downstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037656_T001","Zm00001d037656","sp|Q7GCM7|XIP1_ORYSJ Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1//7.23449e-109",133140745,133141716,"+",43471,"upstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037651_T001","Zm00001d037651","sp|Q9MAP5|SBT33_ARATH Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana GN=SBT3.3 PE=2 SV=1//0",133037545,133043210,"+",50697,"downstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037655_T001","Zm00001d037655",null,133125536,133126336,"+",28262,"upstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037652_T002","Zm00001d037652","sp|Q9FPK7|INO1_MAIZE Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2//3.67041e-147",133048532,133049925,"-",43982,"upstream"]
["chr6","LNC_004240","XLOC_042664","lncRNA",133093908,133097273,"+","Zm00001d037652_T001","Zm00001d037652","sp|Q9FPK7|INO1_MAIZE Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2//3.67041e-147",133048475,133050067,"-",43840,"upstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037658_T001","Zm00001d037658",null,133192852,133194981,"+",94940,"upstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037653_T001","Zm00001d037653","sp|Q7GCM7|XIP1_ORYSJ Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1//1.70753e-93",133069804,133070751,"+",23156,"downstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037651_T002","Zm00001d037651","sp|Q9MAP5|SBT33_ARATH Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana GN=SBT3.3 PE=2 SV=1//0",133037591,133043190,"+",50717,"downstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037656_T001","Zm00001d037656","sp|Q7GCM7|XIP1_ORYSJ Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1//7.23449e-109",133140745,133141716,"+",42833,"upstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037651_T001","Zm00001d037651","sp|Q9MAP5|SBT33_ARATH Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana GN=SBT3.3 PE=2 SV=1//0",133037545,133043210,"+",50697,"downstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037655_T001","Zm00001d037655",null,133125536,133126336,"+",27624,"upstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037652_T002","Zm00001d037652","sp|Q9FPK7|INO1_MAIZE Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2//3.67041e-147",133048532,133049925,"-",43982,"upstream"]
["chr6","LNC_004241","XLOC_042664","lncRNA",133093908,133097911,"+","Zm00001d037652_T001","Zm00001d037652","sp|Q9FPK7|INO1_MAIZE Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2//3.67041e-147",133048475,133050067,"-",43840,"upstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037683_T001","Zm00001d037683",null,133913245,133913876,"+",89776,"downstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037690_T001","Zm00001d037690",null,134071257,134072021,"+",67226,"upstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037688_T001","Zm00001d037688",null,134047638,134049666,"-",43607,"downstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037691_T001","Zm00001d037691","sp|P0C127|IAA16_ORYSJ Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1//9.38766e-45",134088831,134092670,"-",84800,"downstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037684_T001","Zm00001d037684",null,133964806,133965066,"-",38586,"upstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037686_T001","Zm00001d037686","sp|P22989|LDHB_HORVU L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare PE=1 SV=1//2.59578e-60",133977265,133977651,"-",26001,"upstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037691_T002","Zm00001d037691","sp|P0C127|IAA16_ORYSJ Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1//9.38766e-45",134088981,134090699,"-",84950,"downstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037691_T003","Zm00001d037691","sp|P0C127|IAA16_ORYSJ Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1//9.38766e-45",134088981,134092670,"-",84950,"downstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037682_T001","Zm00001d037682","sp|Q9LHF1|LRX4_ARATH Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=LRX4 PE=2 SV=1//1.70685e-80",133908212,133909537,"-",94115,"upstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037689_T002","Zm00001d037689","sp|Q1WM16|HXK7_ORYSJ Hexokinase-7 OS=Oryza sativa subsp. japonica GN=HXK7 PE=2 SV=2//0",134063485,134066237,"+",59454,"upstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037689_T001","Zm00001d037689","sp|Q1WM16|HXK7_ORYSJ Hexokinase-7 OS=Oryza sativa subsp. japonica GN=HXK7 PE=2 SV=2//0",134063370,134066401,"+",59339,"upstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037687_T001","Zm00001d037687","sp|Q4G2J5|DER12_MAIZE Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1//2.45006e-173",133982114,133986795,"+",16857,"downstream"]
["chr6","LNC_004242","XLOC_042683","lncRNA",134003653,134004030,"+","Zm00001d037685_T001","Zm00001d037685","sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3//2.58654e-20",133972566,133974657,"-",28995,"upstream"]
["chr6","LNC_004243","XLOC_042706","lncRNA",135384023,135384499,"+","Zm00001d037727_T001","Zm00001d037727","sp|Q9C5M0|DTC_ARATH Mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Arabidopsis thaliana GN=DTC PE=1 SV=1//3.2679e-169",135296144,135300165,"-",83857,"upstream"]
["chr6","LNC_004243","XLOC_042706","lncRNA",135384023,135384499,"+","Zm00001d037729_T001","Zm00001d037729",null,135445270,135446760,"+",60770,"upstream"]
["chr6","LNC_004243","XLOC_042706","lncRNA",135384023,135384499,"+","Zm00001d037728_T001","Zm00001d037728","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//5.13089e-12",135411231,135415832,"-",26731,"downstream"]
["chr6","LNC_004243","XLOC_042706","lncRNA",135384023,135384499,"+","Zm00001d037728_T003","Zm00001d037728","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//5.13089e-12",135411291,135415750,"-",26791,"downstream"]
["chr6","LNC_004243","XLOC_042706","lncRNA",135384023,135384499,"+","Zm00001d037728_T002","Zm00001d037728","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//5.13089e-12",135411282,135415832,"-",26782,"downstream"]
["chr6","LNC_004243","XLOC_042706","lncRNA",135384023,135384499,"+","Zm00001d037728_T005","Zm00001d037728","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//5.13089e-12",135411619,135415716,"-",27119,"downstream"]
["chr6","LNC_004243","XLOC_042706","lncRNA",135384023,135384499,"+","Zm00001d037728_T004","Zm00001d037728","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//5.13089e-12",135411619,135415698,"-",27119,"downstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037779_T001","Zm00001d037779","sp|Q9ATL6|TIP41_MAIZE Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1//3.85331e-154",137396807,137399127,"+",57934,"downstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037782_T001","Zm00001d037782","sp|Q9LTW5|AGC15_ARATH Serine/threonine-protein kinase AGC1-5 OS=Arabidopsis thaliana GN=AGC1-5 PE=1 SV=1//2.87102e-177",137540925,137542583,"+",83588,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037781_T001","Zm00001d037781","sp|Q6F353|MCM6_ORYSJ DNA replication licensing factor MCM6 OS=Oryza sativa subsp. japonica GN=Os05g0235800 PE=3 SV=1//4.36847e-34",137503065,137509357,"+",45728,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037781_T002","Zm00001d037781","sp|Q6F353|MCM6_ORYSJ DNA replication licensing factor MCM6 OS=Oryza sativa subsp. japonica GN=Os05g0235800 PE=3 SV=1//4.36847e-34",137503065,137509357,"+",45728,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037781_T003","Zm00001d037781","sp|Q6F353|MCM6_ORYSJ DNA replication licensing factor MCM6 OS=Oryza sativa subsp. japonica GN=Os05g0235800 PE=3 SV=1//4.36847e-34",137503099,137509279,"+",45762,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037781_T005","Zm00001d037781","sp|Q6F353|MCM6_ORYSJ DNA replication licensing factor MCM6 OS=Oryza sativa subsp. japonica GN=Os05g0235800 PE=3 SV=1//4.36847e-34",137507756,137509279,"+",50419,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037780_T003","Zm00001d037780",null,137463107,137465879,"+",5770,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037780_T002","Zm00001d037780",null,137462830,137465879,"+",5493,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037780_T001","Zm00001d037780",null,137462829,137465862,"+",5492,"upstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d001433_T001","Zm00001d001433",null,137367374,137368008,"+",89053,"downstream"]
["chr6","LNC_004244","XLOC_042735","lncRNA",137457062,137457336,"+","Zm00001d037780_T004","Zm00001d037780",null,137463401,137465876,"+",6064,"upstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037784_T002","Zm00001d037784","sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1//0",137680643,137684176,"+",19975,"downstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037784_T001","Zm00001d037784","sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1//0",137680490,137684176,"+",19975,"downstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037785_T004","Zm00001d037785","sp|Q5BJC2|KISHA_DANRE Protein kish-A OS=Danio rerio GN=tmem167a PE=3 SV=1//1.0631e-10",137686742,137692928,"-",11223,"upstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037785_T005","Zm00001d037785","sp|Q5BJC2|KISHA_DANRE Protein kish-A OS=Danio rerio GN=tmem167a PE=3 SV=1//1.0631e-10",137686744,137693019,"-",11132,"upstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037785_T006","Zm00001d037785","sp|Q5BJC2|KISHA_DANRE Protein kish-A OS=Danio rerio GN=tmem167a PE=3 SV=1//1.0631e-10",137686754,137693064,"-",11087,"upstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037785_T001","Zm00001d037785","sp|Q5BJC2|KISHA_DANRE Protein kish-A OS=Danio rerio GN=tmem167a PE=3 SV=1//1.0631e-10",137686672,137693051,"-",11100,"upstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037785_T002","Zm00001d037785","sp|Q5BJC2|KISHA_DANRE Protein kish-A OS=Danio rerio GN=tmem167a PE=3 SV=1//1.0631e-10",137686672,137693217,"-",10934,"upstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037785_T003","Zm00001d037785","sp|Q5BJC2|KISHA_DANRE Protein kish-A OS=Danio rerio GN=tmem167a PE=3 SV=1//1.0631e-10",137686672,137693217,"-",10934,"upstream"]
["chr6","LNC_004245","XLOC_042742","lncRNA",137704152,137704409,"+","Zm00001d037783_T001","Zm00001d037783","sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2//0",137664274,137666727,"+",37424,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T018","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138533613,138543947,"-",39352,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T002","Zm00001d037808",null,138453460,138484610,"-",9400,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T003","Zm00001d037808",null,138453463,138484569,"-",9441,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T025","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138541091,138543365,"-",46830,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T015","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532356,138543946,"-",38095,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T016","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532476,138543946,"-",38215,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T026","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138541101,138543938,"-",46840,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T020","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138533651,138543958,"-",39390,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T004","Zm00001d037808",null,138453464,138484610,"-",9400,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T024","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138538813,138543946,"-",44552,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T005","Zm00001d037808",null,138453476,138484581,"-",9429,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037811_T001","Zm00001d037811","sp|Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=2 SV=1//1.30626e-146",138545312,138550589,"-",51051,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T009","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532354,138543893,"-",38093,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T008","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532354,138543893,"-",38093,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T003","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532222,138543946,"-",37961,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T002","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532222,138543893,"-",37961,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T001","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532222,138538654,"-",37961,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T001","Zm00001d037808",null,138453460,138484569,"-",9441,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T006","Zm00001d037808",null,138453485,138484606,"-",9404,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T007","Zm00001d037808",null,138453487,138468586,"-",25424,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T005","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532353,138543945,"-",38092,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T004","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138532262,138543946,"-",38001,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037810_T019","Zm00001d037810","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//8.07697e-23",138533651,138543946,"-",39390,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T008","Zm00001d037808",null,138453487,138468844,"-",25166,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037807_T003","Zm00001d037807","sp|Q54G80|TF2AA_DICDI Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum GN=gtf2a1 PE=3 SV=1//2.79635e-11",138381396,138396105,"+",97905,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037807_T002","Zm00001d037807","sp|Q54G80|TF2AA_DICDI Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum GN=gtf2a1 PE=3 SV=1//2.79635e-11",138381297,138396127,"+",97883,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037807_T001","Zm00001d037807","sp|Q54G80|TF2AA_DICDI Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum GN=gtf2a1 PE=3 SV=1//2.79635e-11",138381297,138396121,"+",97889,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037808_T009","Zm00001d037808",null,138453487,138480641,"-",13369,"upstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037807_T006","Zm00001d037807","sp|Q54G80|TF2AA_DICDI Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum GN=gtf2a1 PE=3 SV=1//2.79635e-11",138382294,138396062,"+",97948,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037807_T005","Zm00001d037807","sp|Q54G80|TF2AA_DICDI Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum GN=gtf2a1 PE=3 SV=1//2.79635e-11",138381400,138396104,"+",97906,"downstream"]
["chr6","LNC_004246","XLOC_042754","lncRNA",138494011,138494260,"+","Zm00001d037807_T004","Zm00001d037807","sp|Q54G80|TF2AA_DICDI Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum GN=gtf2a1 PE=3 SV=1//2.79635e-11",138381400,138396062,"+",97948,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037847_T001","Zm00001d037847","sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2//1.93769e-32",139626653,139627309,"+",37832,"upstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T008","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569246,139584130,"+",4120,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T004","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569172,139584110,"+",4140,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T005","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569223,139584128,"+",4122,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T006","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569243,139584128,"+",4122,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T007","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569243,139584152,"+",4098,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T001","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569167,139584152,"+",4098,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T002","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569167,139584177,"+",4073,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037846_T003","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569167,139584177,"+",4073,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037849_T001","Zm00001d037849","sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1//0",139653712,139655851,"+",64891,"upstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037849_T003","Zm00001d037849","sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1//0",139653712,139656071,"+",64891,"upstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037849_T002","Zm00001d037849","sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1//0",139653712,139655942,"+",64891,"upstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037849_T004","Zm00001d037849","sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1//0",139654882,139655942,"+",66061,"upstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T008","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632994,139635632,"-",44173,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T009","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139634397,139635368,"-",45576,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T006","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632940,139635697,"-",44119,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T007","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632971,139635697,"-",44150,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T004","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632939,139635752,"-",44118,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T005","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632939,139635759,"-",44118,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T002","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632912,139635629,"-",44091,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T003","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632912,139635629,"-",44091,"downstream"]
["chr6","LNC_004247","XLOC_042774","lncRNA",139588251,139588820,"+","Zm00001d037848_T001","Zm00001d037848","sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1//5.23504e-10",139632912,139635368,"-",44091,"downstream"]
["chr10","LNC_001199","XLOC_011910","lncRNA",60088597,60088955,"-","Zm00001d024265_T001","Zm00001d024265","sp|Q9M0U9|SKI19_ARATH F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1//1.79036e-15",60015948,60017307,"-",71289,"upstream"]
["chr10","LNC_001199","XLOC_011910","lncRNA",60088597,60088955,"-","Zm00001d024266_T001","Zm00001d024266",null,60045206,60046381,"-",42215,"upstream"]
["chr10","LNC_001199","XLOC_011910","lncRNA",60088597,60088955,"-","Zm00001d024267_T001","Zm00001d024267","sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1//1.70238e-44",60073377,60074308,"+",14288,"downstream"]
["chr10","LNC_001198","XLOC_011900","lncRNA",59362294,59362578,"-","Zm00001d024245_T001","Zm00001d024245","sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2//3.14516e-169",59264330,59271577,"-",90716,"upstream"]
["chr10","LNC_001198","XLOC_011900","lncRNA",59362294,59362578,"-","Zm00001d024248_T001","Zm00001d024248","sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2//1.61946e-07",59441463,59446450,"+",78884,"upstream"]
["chr10","LNC_001198","XLOC_011900","lncRNA",59362294,59362578,"-","Zm00001d024248_T002","Zm00001d024248","sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2//1.61946e-07",59441463,59446450,"+",78884,"upstream"]
["chr10","LNC_001198","XLOC_011900","lncRNA",59362294,59362578,"-","Zm00001d024246_T001","Zm00001d024246","sp|Q9SX38|DRL4_ARATH Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=3 SV=2//3.00011e-10",59323337,59324722,"-",37571,"upstream"]
["chr10","LNC_001198","XLOC_011900","lncRNA",59362294,59362578,"-","Zm00001d024248_T003","Zm00001d024248","sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2//1.61946e-07",59441482,59446446,"+",78903,"upstream"]
["chr10","LNC_001198","XLOC_011900","lncRNA",59362294,59362578,"-","Zm00001d024244_T001","Zm00001d024244",null,59263359,59263667,"+",98626,"downstream"]
["chr10","LNC_001198","XLOC_011900","lncRNA",59362294,59362578,"-","Zm00001d023107_T001","Zm00001d023107",null,59355020,59356349,"+",5944,"downstream"]
["chr10","LNC_001197","XLOC_011895","lncRNA",58976481,58976770,"-","Zm00001d024239_T001","Zm00001d024239","sp|Q6Z1D5|ATG8C_ORYSJ Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1//2.88709e-69",59002720,59004799,"+",25949,"upstream"]
["chr10","LNC_001197","XLOC_011895","lncRNA",58976481,58976770,"-","Zm00001d024238_T001","Zm00001d024238","sp|P93527|PHYB_SORBI Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2//3.29214e-95",58940661,58959893,"+",16587,"downstream"]
["chr10","LNC_001197","XLOC_011895","lncRNA",58976481,58976770,"-","Zm00001d024239_T002","Zm00001d024239","sp|Q6Z1D5|ATG8C_ORYSJ Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1//2.88709e-69",59002720,59005171,"+",25949,"upstream"]
["chr10","LNC_001197","XLOC_011895","lncRNA",58976481,58976770,"-","zma-mir171j","zma-MIR171j",null,59006552,59006680,"+",29781,"upstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024230_T001","Zm00001d024230","sp|Q8LCG7|NFYC2_ARATH Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2 SV=2//1.24305e-62",58448599,58449354,"+",44004,"upstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024231_T001","Zm00001d024231","sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=1 SV=1//8.53538e-68",58449887,58454061,"-",45292,"downstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024228_T001","Zm00001d024228","sp|Q9UJ78|ZMYM5_HUMAN Zinc finger MYM-type protein 5 OS=Homo sapiens GN=ZMYM5 PE=1 SV=4//3.49957e-22",58347617,58349489,"+",54713,"downstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024229_T005","Zm00001d024229","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//1.15491e-71",58417193,58422086,"+",12598,"upstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024229_T004","Zm00001d024229","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//1.15491e-71",58417186,58422086,"+",12591,"upstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024227_T001","Zm00001d024227",null,58342554,58343244,"+",60958,"downstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024229_T006","Zm00001d024229","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//1.15491e-71",58417230,58422085,"+",12635,"upstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024229_T001","Zm00001d024229","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//1.15491e-71",58417186,58421805,"+",12591,"upstream"]
["chr10","LNC_001196","XLOC_011892","lncRNA",58404203,58404594,"-","Zm00001d024229_T002","Zm00001d024229","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//1.15491e-71",58417186,58421828,"+",12591,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T034","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58198041,58208105,"+",4144,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T035","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58198366,58208203,"+",4469,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T036","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58198847,58208267,"+",4950,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T037","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58199544,58208103,"+",5647,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T031","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58197868,58208197,"+",3971,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T018","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196410,58208194,"+",2513,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T019","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196410,58208254,"+",2513,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T017","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196410,58208194,"+",2513,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T015","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196410,58202872,"+",2513,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T012","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196366,58208203,"+",2469,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T013","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196392,58208196,"+",2495,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T010","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196344,58208196,"+",2447,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T011","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58196366,58208194,"+",2469,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T064","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58202705,58208102,"+",8808,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T054","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58201878,58208197,"+",7981,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T057","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58201922,58208208,"+",8025,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T050","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58200676,58208204,"+",6779,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T032","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58197877,58208196,"+",3980,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024223_T001","Zm00001d024223",null,58143098,58144926,"-",48598,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T033","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58198028,58208254,"+",4131,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T059","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58202110,58208203,"+",8213,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024224_T001","Zm00001d024224",null,58144857,58147909,"+",45615,"downstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T027","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58197009,58208254,"+",3112,"upstream"]
["chr10","LNC_001195","XLOC_011891","lncRNA",58193525,58193896,"-","Zm00001d024225_T052","Zm00001d024225","sp|O23372|ATXR3_ARATH Histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=2 SV=2//0",58200874,58207350,"+",6977,"upstream"]
["chr10","LNC_001192","XLOC_011876","lncRNA",55643389,55643686,"-","Zm00001d024203_T001","Zm00001d024203","sp|Q9LD61|PYRB_ORYSJ Aspartate carbamoyltransferase, chloroplastic OS=Oryza sativa subsp. japonica GN=PYRB PE=2 SV=1//0",55739987,55744441,"+",96300,"upstream"]
["chr6","LNC_004100","XLOC_041479","lncRNA",48121362,48121577,"+","Zm00001d035777_T001","Zm00001d035777",null,48101050,48101842,"-",19519,"upstream"]
["chr2","LNC_001990","XLOC_019535","lncRNA",175435973,175436322,"-","Zm00001d005478_T004","Zm00001d005478","sp|Q6YVM4|CESA6_ORYSJ Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1//0",175506208,175511686,"+",69885,"upstream"]
["chr2","LNC_001999","XLOC_019620","lncRNA",181392031,181392312,"-","Zm00001d005636_T001","Zm00001d005636","sp|O23144|PPI1_ARATH Proton pump-interactor 1 OS=Arabidopsis thaliana GN=PPI1 PE=1 SV=2//5.61603e-95",181459859,181465569,"+",67546,"upstream"]
["chr5","LNC_003739","XLOC_037992","lncRNA",10336967,10339203,"-","Zm00001d013389_T003","Zm00001d013389","sp|O65902|ACAP1_ARATH Cyclase-associated protein 1 OS=Arabidopsis thaliana GN=CAP1 PE=2 SV=1//1.63432e-08",10253647,10261507,"+",75459,"downstream"]
["chr5","LNC_003738","XLOC_037992","lncRNA",10333854,10339203,"-","Zm00001d013399_T001","Zm00001d013399","sp|Q9FDW1|MYB44_ARATH Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1//2.94564e-33",10404922,10407154,"-",65718,"downstream"]
["chr5","LNC_003731","XLOC_037832","lncRNA",5154002,5154528,"-","Zm00001d013119_T001","Zm00001d013119","sp|A2XMN1|PCF6_ORYSI Transcription factor PCF6 OS=Oryza sativa subsp. indica GN=PCF6 PE=3 SV=1//4.4725e-33",5078404,5079549,"-",74452,"upstream"]
["chr5","LNC_003733","XLOC_037914","lncRNA",7634813,7635181,"-","Zm00001d013276_T013","Zm00001d013276","sp|F4IRU3|MYO12_ARATH Myosin-12 OS=Arabidopsis thaliana GN=XI-F PE=2 SV=1//0",7615294,7623941,"-",10871,"upstream"]
["chr5","LNC_003733","XLOC_037914","lncRNA",7634813,7635181,"-","Zm00001d013274_T070","Zm00001d013274","sp|B6SFA4|MAA3_ARATH Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana GN=MAA3 PE=2 SV=1//2.51468e-15",7548592,7559173,"-",75639,"upstream"]
["chr5","LNC_003733","XLOC_037914","lncRNA",7634813,7635181,"-","Zm00001d013274_T033","Zm00001d013274","sp|B6SFA4|MAA3_ARATH Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana GN=MAA3 PE=2 SV=1//2.51468e-15",7548514,7559124,"-",75688,"upstream"]
["chr5","LNC_003733","XLOC_037914","lncRNA",7634813,7635181,"-","Zm00001d013278_T083","Zm00001d013278","sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1 OS=Arabidopsis thaliana GN=IDM1 PE=1 SV=1//3.7627e-11",7707270,7714769,"-",72088,"downstream"]
["chr5","LNC_003735","XLOC_037928","lncRNA",7973264,7973587,"-","Zm00001d013299_T001","Zm00001d013299","sp|Q2QSL4|CDKF2_ORYSJ Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica GN=CDKF-2 PE=3 SV=1//4.09542e-63",8011882,8013009,"+",38294,"upstream"]
["chr5","LNC_003737","XLOC_037988","lncRNA",10324660,10327601,"-","Zm00001d013391_T004","Zm00001d013391","sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3//1.79834e-13",10268268,10276931,"-",47728,"upstream"]
["chr5","LNC_003736","XLOC_037966","lncRNA",9544538,9544865,"-","Zm00001d013358_T012","Zm00001d013358","sp|Q6ATJ8|RH16_ORYSJ DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa subsp. japonica GN=Os03g0728800 PE=2 SV=1//4.89892e-45",9523617,9534351,"-",10186,"upstream"]
["chr5","LNC_003454","XLOC_034782","lncRNA",20478227,20478469,"+","Zm00001d013796_T038","Zm00001d013796","sp|Q10HL3|DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica GN=DCL2A PE=2 SV=1//1.53238e-18",20375132,20391834,"-",86392,"upstream"]
["chr5","LNC_003457","XLOC_034787","lncRNA",21057013,21068431,"+","Zm00001d013804_T003","Zm00001d013804","sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1//4.97487e-168",20982616,20986752,"+",70260,"downstream"]
["chr5","LNC_003450","XLOC_034671","lncRNA",15047249,15047655,"+","Zm00001d013596_T001","Zm00001d013596","sp|O34569|YOAA_BACSU Uncharacterized N-acetyltransferase YoaA OS=Bacillus subtilis (strain 168) GN=yoaA PE=3 SV=2//1.00352e-11",15094771,15095668,"-",47115,"downstream"]
["chr5","LNC_003451","XLOC_034674","lncRNA",15095017,15095376,"+","Zm00001d013599_T018","Zm00001d013599","sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1 OS=Arabidopsis thaliana GN=PAPS1 PE=1 SV=1//0",15110521,15119676,"-",15144,"downstream"]
["chr5","LNC_003453","XLOC_034735","lncRNA",18101505,18101773,"+","Zm00001d013707_T001","Zm00001d013707","sp|Q75GK1|IAA12_ORYSJ Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1//1.02559e-47",18196300,18197763,"-",94526,"downstream"]
["chr5","LNC_003459","XLOC_034807","lncRNA",21930799,21931003,"+","Zm00001d013836_T003","Zm00001d013836","sp|Q551H4|FRAY2_DICDI Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1//1.40332e-94",21955530,21983392,"-",24526,"downstream"]
["chr9","LNC_005674","XLOC_056918","lncRNA",11467893,11468118,"+","Zm00001d045072_T020","Zm00001d045072",null,11555084,11562202,"-",86965,"downstream"]
["chr9","LNC_005675","XLOC_056922","lncRNA",11695966,11696181,"+","Zm00001d045076_T009","Zm00001d045076","sp|Q69KL9|RZ21A_ORYSJ Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica GN=RSZ21A PE=2 SV=1//4.12835e-53",11781685,11784656,"-",85503,"downstream"]
["chr2","LNC_001606","XLOC_015479","lncRNA",150608207,150608497,"+","Zm00001d004955_T006","Zm00001d004955","sp|Q9SFB8|PI5K6_ARATH Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana GN=PIP5K6 PE=2 SV=1//2.55804e-48",150557656,150558746,"+",49460,"downstream"]
["chr2","LNC_001602","XLOC_015412","lncRNA",142823632,142827455,"+","Zm00001d004837_T001","Zm00001d004837","sp|Q99JH1|RP25L_MOUSE Ribonuclease P protein subunit p25-like protein OS=Mus musculus GN=Rpp25l PE=2 SV=1//3.61117e-14",142729514,142739676,"-",83955,"upstream"]
["chr7","LNC_005079","XLOC_051020","lncRNA",178203385,178203973,"-","Zm00001d022467_T001","Zm00001d022467","sp|F8WKW8|UGT9_GARJA Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase OS=Gardenia jasminoides GN=UGT94E5 PE=1 SV=1//4.01849e-85",178218340,178219782,"+",14366,"upstream"]
["chr7","LNC_005074","XLOC_050976","lncRNA",176513220,176513610,"-","Zm00001d022387_T005","Zm00001d022387","sp|Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7 OS=Arabidopsis thaliana GN=ROPGAP7 PE=2 SV=1//0",176575779,176586783,"+",62168,"upstream"]
["chr7","LNC_005074","XLOC_050976","lncRNA",176513220,176513610,"-","Zm00001d022388_T017","Zm00001d022388","sp|P23225|GLTB_MAIZE Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1//2.22116e-08",176589331,176593182,"-",75720,"downstream"]
["chr7","LNC_005074","XLOC_050976","lncRNA",176513220,176513610,"-","Zm00001d022378_T127","Zm00001d022378","sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B OS=Arabidopsis thaliana GN=SEC31B PE=1 SV=1//1.74813e-38",176437761,176443870,"+",69349,"downstream"]
["chr1","LNC_000550","XLOC_006075","lncRNA",84936930,84937142,"-","Zm00001d029740_T002","Zm00001d029740","sp|Q42551|SCE1_ARATH SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1//1.12676e-82",84849115,84851294,"-",85635,"upstream"]
["chr7","LNC_005072","XLOC_050949","lncRNA",175729443,175729833,"-","Zm00001d022335_T005","Zm00001d022335","sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1//0",175629925,175635300,"-",94142,"upstream"]
["chr8","LNC_005133","XLOC_051540","lncRNA",21815130,21815377,"+","Zm00001d008826_T130","Zm00001d008826","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//0",21787340,21793720,"-",21409,"upstream"]
["chr8","LNC_005133","XLOC_051540","lncRNA",21815130,21815377,"+","Zm00001d008824_T001","Zm00001d008824",null,21740739,21742287,"-",72842,"upstream"]
["chr8","LNC_005132","XLOC_051534","lncRNA",21280352,21280756,"+","Zm00001d008814_T001","Zm00001d008814","sp|Q41247|AL7A1_BRANA Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3//4.03024e-27",21374741,21378820,"-",93984,"downstream"]
["chr5","LNC_003926","XLOC_039923","lncRNA",174484681,174485035,"-","Zm00001d016731_T002","Zm00001d016731","sp|Q6DW74|DGDG1_LOTJA Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1//0",174488048,174489138,"-",3012,"downstream"]
["chr8","LNC_005136","XLOC_051576","lncRNA",23600395,23602220,"+","Zm00001d008874_T006","Zm00001d008874","sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1//0",23543674,23549631,"+",50763,"downstream"]
["chr2","LNC_001388","XLOC_013940","lncRNA",16358292,16358778,"+","Zm00001d002600_T008","Zm00001d002600","sp|Q7XUH5|POED1_ORYSJ Polyprenol reductase 1 OS=Oryza sativa subsp. japonica GN=Os04g0576800 PE=2 SV=2//9.45382e-42",16448217,16455294,"-",89438,"downstream"]
["chr2","LNC_001388","XLOC_013940","lncRNA",16358292,16358778,"+","Zm00001d002594_T001","Zm00001d002594","sp|Q3EAL1|OFP6_ARATH Transcription repressor OFP6 OS=Arabidopsis thaliana GN=OFP6 PE=1 SV=1//3.84265e-18",16330379,16331572,"-",26719,"upstream"]
["chr2","LNC_001389","XLOC_013953","lncRNA",16923399,16923615,"+","Zm00001d002621_T003","Zm00001d002621","sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2 SV=1//2.3829e-11",16980364,16988258,"-",56748,"downstream"]
["chr2","LNC_001382","XLOC_013860","lncRNA",13310006,13310451,"+","Zm00001d002462_T074","Zm00001d002462","sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6 PE=1 SV=1//0",13297985,13307610,"+",2395,"downstream"]
["chr2","LNC_001382","XLOC_013860","lncRNA",13310006,13310451,"+","Zm00001d002462_T083","Zm00001d002462","sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6 PE=1 SV=1//0",13298031,13307605,"+",2400,"downstream"]
["chr2","LNC_001382","XLOC_013860","lncRNA",13310006,13310451,"+","Zm00001d002462_T046","Zm00001d002462","sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6 PE=1 SV=1//0",13296654,13303489,"+",6516,"downstream"]
["chr2","LNC_001383","XLOC_013882","lncRNA",14065628,14066320,"+","Zm00001d002499_T004","Zm00001d002499","sp|Q7KWM5|ALG2_DICDI Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Dictyostelium discoideum GN=alg2 PE=3 SV=1//2.75511e-82",14086385,14100162,"-",20064,"downstream"]
["chr2","LNC_001380","XLOC_013737","lncRNA",8561338,8561601,"+","Zm00001d002239_T223","Zm00001d002239",null,8607893,8614687,"-",46291,"downstream"]
["chr2","LNC_001380","XLOC_013737","lncRNA",8561338,8561601,"+","Zm00001d002239_T122","Zm00001d002239",null,8607657,8615232,"-",46055,"downstream"]
["chr2","LNC_001380","XLOC_013737","lncRNA",8561338,8561601,"+","Zm00001d002239_T041","Zm00001d002239",null,8607619,8615298,"-",46017,"downstream"]
["chr2","LNC_001380","XLOC_013737","lncRNA",8561338,8561601,"+","Zm00001d002239_T167","Zm00001d002239",null,8607790,8613592,"-",46188,"downstream"]
["chr2","LNC_001380","XLOC_013737","lncRNA",8561338,8561601,"+","Zm00001d002239_T075","Zm00001d002239",null,8607636,8615350,"-",46034,"downstream"]
["chr2","LNC_001385","XLOC_013922","lncRNA",15613434,15613677,"+","Zm00001d002568_T001","Zm00001d002568","sp|Q9P7E1|YOF7_SCHPO Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP4H10.07 PE=1 SV=1//9.69282e-11",15589097,15589561,"+",23872,"downstream"]
["chr7","LNC_004719","XLOC_047228","lncRNA",96122320,96129628,"+","Zm00001d020152_T002","Zm00001d020152","sp|Q60482|RPC9_CAVPO DNA-directed RNA polymerase III subunit RPC9 OS=Cavia porcellus GN=CRCP PE=2 SV=1//9.19029e-08",96117991,96121522,"+",797,"downstream"]
["chr1","LNC_000832","XLOC_008575","lncRNA",279338020,279339655,"-","Zm00001d033945_T011","Zm00001d033945","sp|Q7XPE8|NRX3_ORYSJ Probable nucleoredoxin 3 OS=Oryza sativa subsp. japonica GN=Os04g0608600 PE=3 SV=2//2.66353e-07",279349460,279365014,"-",9804,"downstream"]
["chr1","LNC_000830","XLOC_008564","lncRNA",278606766,278613100,"-","Zm00001d033922_T003","Zm00001d033922","sp|Q42687|ATPD_CHLRE ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1//3.51121e-13",278618585,278620001,"+",5484,"upstream"]
["chr1","LNC_000835","XLOC_008613","lncRNA",281084251,281087398,"-","Zm00001d034010_T008","Zm00001d034010","sp|P36616|DSK1_SCHPO Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dsk1 PE=3 SV=2//1.92446e-19",281125405,281129744,"+",38006,"upstream"]
["chr1","LNC_000835","XLOC_008613","lncRNA",281084251,281087398,"-","Zm00001d034013_T007","Zm00001d034013","sp|Q8VHK9|DHX36_MOUSE ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36 PE=1 SV=2//0",281170430,281177118,"-",83031,"downstream"]
["chr1","LNC_000838","XLOC_008657","lncRNA",283583087,283583622,"-","Zm00001d034080_T030","Zm00001d034080","sp|F4I241|BUB33_ARATH Mitotic checkpoint protein BUB3.3 OS=Arabidopsis thaliana GN=BUB3.3 PE=2 SV=1//2.60619e-62",283563450,283579999,"+",3087,"downstream"]
["chr2","LNC_002093","XLOC_020832","lncRNA",239940641,239940975,"-","Zm00001d007806_T007","Zm00001d007806","sp|Q8LGI3|ARC2A_ARATH Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana GN=ARPC2A PE=1 SV=1//4.89439e-48",239998883,240007107,"-",57907,"downstream"]
["chr2","LNC_002092","XLOC_020821","lncRNA",239471035,239471413,"-","Zm00001d007783_T001","Zm00001d007783","sp|P51281|YCF45_PORPU Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1//8.15222e-150",239500396,239505004,"-",28982,"downstream"]
["chr2","LNC_002095","XLOC_020837","lncRNA",240033908,240034342,"-","Zm00001d007810_T003","Zm00001d007810","sp|P31674|RS15_ORYSJ 40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2//2.2205e-27",240071661,240073376,"+",37318,"upstream"]
["chr2","LNC_002094","XLOC_020836","lncRNA",240023630,240023865,"-","Zm00001d007806_T001","Zm00001d007806","sp|Q8LGI3|ARC2A_ARATH Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana GN=ARPC2A PE=1 SV=1//4.89439e-48",239998752,240009866,"-",13763,"upstream"]
["chr2","LNC_002094","XLOC_020836","lncRNA",240023630,240023865,"-","Zm00001d007807_T011","Zm00001d007807","sp|Q7F1M0|KU70_ORYSJ ATP-dependent DNA helicase 2 subunit KU70 OS=Oryza sativa subsp. japonica GN=KU70 PE=1 SV=1//7.61453e-19",240011428,240022438,"-",1191,"upstream"]
["chr1","LNC_000819","XLOC_008511","lncRNA",275485677,275491973,"-","Zm00001d033843_T010","Zm00001d033843","sp|F4KDH9|FIPS5_ARATH FIP1[V]-like protein OS=Arabidopsis thaliana GN=FIPS5 PE=1 SV=1//1.63554e-33",275588505,275609463,"+",96531,"upstream"]
["chr1","LNC_000762","XLOC_007918","lncRNA",239671109,239671380,"-","Zm00001d032832_T001","Zm00001d032832","sp|Q9LDD4|ARID2_ARATH AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana GN=ARID2 PE=2 SV=1//1.12015e-26",239629217,239639245,"-",31863,"upstream"]
["chr1","LNC_000761","XLOC_007905","lncRNA",239186761,239187991,"-","Zm00001d032815_T013","Zm00001d032815","sp|P38094|FLUG_EMENI Protein fluG OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fluG PE=1 SV=1//1.22096e-11",239121654,239145304,"-",41456,"upstream"]
["chr1","LNC_000767","XLOC_007938","lncRNA",241297328,241297780,"-","Zm00001d032883_T001","Zm00001d032883","sp|Q75I75|EXP31_ORYSJ Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2//1.25393e-109",241396118,241397644,"-",98337,"downstream"]
["chr3","LNC_002547","XLOC_025284","lncRNA",73111632,73112010,"-","Zm00001d040864_T005","Zm00001d040864","sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog OS=Arabidopsis thaliana GN=At2g48040/At2g48050/At2g48060 PE=2 SV=1//0",73203870,73233532,"-",91859,"downstream"]
["chr4","LNC_003150","XLOC_031407","lncRNA",37660997,37661247,"-","Zm00001d049614_T001","Zm00001d049614","sp|Q84V39|ALL10_OLEEU Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1//1.67821e-21",37641162,37642079,"-",18917,"upstream"]
["chr4","LNC_003153","XLOC_031432","lncRNA",38971685,38972217,"-","Zm00001d049656_T001","Zm00001d049656","sp|Q6DRC4|EIF3G_DANRE Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=1 SV=1//3.75799e-42",38886286,38888978,"+",82706,"downstream"]
["chr1","LNC_000498","XLOC_005564","lncRNA",49095274,49096541,"-","Zm00001d028870_T001","Zm00001d028870",null,49176439,49177083,"-",79897,"downstream"]
["chr1","LNC_000495","XLOC_005534","lncRNA",47680058,47680332,"-","Zm00001d028818_T051","Zm00001d028818","sp|Q8RVL1|DEK1_MAIZE Calpain-type cysteine protease DEK1 OS=Zea mays GN=DEK1 PE=1 SV=2//0",47580266,47589475,"+",90582,"downstream"]
["chr1","LNC_000496","XLOC_005539","lncRNA",48140807,48141153,"-","Zm00001d028834_T001","Zm00001d028834","sp|Q10MN2|PX113_ORYSJ Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica GN=PEX11-3 PE=2 SV=1//2.15005e-102",48128232,48128960,"+",11846,"downstream"]
["chr1","LNC_000490","XLOC_005459","lncRNA",43368076,43368378,"-","Zm00001d028692_T001","Zm00001d028692","sp|Q8H8U5|IN21B_ORYSJ Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1//6.48031e-70",43328452,43331255,"-",36820,"upstream"]
["chr3","LNC_002402","XLOC_023751","lncRNA",210277167,210277959,"+","Zm00001d043785_T002","Zm00001d043785",null,210178246,210185201,"-",91965,"upstream"]
["chr3","LNC_002403","XLOC_023757","lncRNA",210517739,210518164,"+","Zm00001d043805_T018","Zm00001d043805","sp|O14099|YERG_SCHPO Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.16 PE=3 SV=1//4.81264e-16",210581551,210592153,"+",63386,"upstream"]
["chr3","LNC_002404","XLOC_023782","lncRNA",211981464,211982032,"+","Zm00001d043845_T004","Zm00001d043845","sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0681900 PE=2 SV=1//1.10361e-131",211901793,211913669,"+",67794,"downstream"]
["chr3","LNC_002405","XLOC_023791","lncRNA",212491015,212492513,"+","Zm00001d043868_T001","Zm00001d043868",null,212516107,212517456,"+",23593,"upstream"]
["chr3","LNC_002408","XLOC_023847","lncRNA",215426021,215427473,"+","Zm00001d043969_T001","Zm00001d043969","sp|Q6QPM2|GAT19_ARATH GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2//8.21368e-14",215346971,215347825,"-",78195,"upstream"]
["chr10","LNC_001011","XLOC_010266","lncRNA",101492089,101492449,"+","Zm00001d025048_T003","Zm00001d025048","sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus GN=Tbl1xr1 PE=1 SV=1//3.20297e-17",101561345,101582556,"-",68895,"downstream"]
["chr10","LNC_001011","XLOC_010266","lncRNA",101492089,101492449,"+","Zm00001d025047_T001","Zm00001d025047","sp|Q0JEQ2|APX3_ORYSJ Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=3 SV=1//2.06929e-159",101525953,101527964,"-",33503,"downstream"]
["chr10","LNC_001017","XLOC_010347","lncRNA",108390433,108391470,"+","Zm00001d025190_T001","Zm00001d025190","sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1 OS=Danio rerio GN=pif1 PE=2 SV=1//2.68785e-23",108451310,108454336,"+",59839,"upstream"]
["chr10","LNC_001176","XLOC_011760","lncRNA",39081465,39082028,"-","Zm00001d024041_T009","Zm00001d024041","sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1//4.62256e-09",39073396,39078073,"-",3391,"upstream"]
["chr6","LNC_004279","XLOC_043308","lncRNA",165672968,165673361,"+","Zm00001d038839_T001","Zm00001d038839","sp|Q8LDK3|NDUB2_ARATH NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 OS=Arabidopsis thaliana GN=At1g76200 PE=3 SV=1//1.94926e-13",165594007,165597229,"-",75738,"upstream"]
["chr6","LNC_004278","XLOC_043295","lncRNA",165281684,165282019,"+","Zm00001d038817_T001","Zm00001d038817",null,165181796,165182279,"-",99404,"upstream"]
["chr6","LNC_004278","XLOC_043295","lncRNA",165281684,165282019,"+","Zm00001d038819_T024","Zm00001d038819","sp|F4JET1|NSE4B_ARATH Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana GN=NSE4B PE=2 SV=1//7.1756e-52",165191925,165199082,"-",82601,"upstream"]
["chr5","LNC_003712","XLOC_037606","lncRNA",221695376,221696087,"+","Zm00001d018490_T002","Zm00001d018490","sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1//7.29556e-15",221706613,221713343,"+",10525,"upstream"]
["chr5","LNC_003712","XLOC_037606","lncRNA",221695376,221696087,"+","Zm00001d018487_T003","Zm00001d018487","sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2//1.30785e-54",221688156,221691939,"-",3436,"upstream"]
["chr5","LNC_003710","XLOC_037535","lncRNA",219633872,219634074,"+","Zm00001d018384_T004","Zm00001d018384","sp|Q6KAJ4|MCM5_ORYSJ DNA replication licensing factor MCM5 OS=Oryza sativa subsp. japonica GN=MCM5 PE=2 SV=1//0",219713761,219718519,"-",79686,"downstream"]
["chr5","LNC_003717","XLOC_037657","lncRNA",26456,26662,"-","Zm00001d012799_T009","Zm00001d012799",null,92547,93529,"+",65884,"upstream"]
["chr5","LNC_003716","XLOC_037656","lncRNA",23282,24530,"-","Zm00001d012799_T001","Zm00001d012799",null,92538,93192,"+",68007,"upstream"]
["chr5","LNC_003716","XLOC_037656","lncRNA",23282,24530,"-","Zm00001d012794_T005","Zm00001d012794","sp|B0JUK5|TRMB_MICAN tRNA (guanine-N(7)-)-methyltransferase OS=Microcystis aeruginosa (strain NIES-843) GN=trmB PE=3 SV=1//1.02419e-06",32762,35544,"-",8231,"downstream"]
["chr5","LNC_003714","XLOC_037622","lncRNA",222342727,222342979,"+","Zm00001d018516_T001","Zm00001d018516","sp|Q6K7R9|RH48_ORYSJ DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica GN=Os02g0826100 PE=2 SV=1//0",222352424,222357010,"-",9444,"downstream"]
["chr5","LNC_003719","XLOC_037692","lncRNA",1194822,1195661,"-","Zm00001d012851_T008","Zm00001d012851","sp|Q921L5|COG2_MOUSE Conserved oligomeric Golgi complex subunit 2 OS=Mus musculus GN=Cog2 PE=2 SV=2//1.09763e-08",1094818,1098779,"+",96042,"downstream"]
["chr8","LNC_005386","XLOC_054277","lncRNA",15605538,15606021,"-","Zm00001d008640_T005","Zm00001d008640","sp|Q9FYP9|IMAP2_ORYSJ Importin subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os01g0158000 PE=2 SV=1//2.21888e-66",15541974,15543988,"+",61549,"downstream"]
["chr8","LNC_005383","XLOC_054255","lncRNA",14439657,14440925,"-","Zm00001d008614_T006","Zm00001d008614","sp|A2ZP58|ARP5_ORYSJ Actin-related protein 5 OS=Oryza sativa subsp. japonica GN=ARP5 PE=3 SV=2//0",14481872,14491065,"-",40946,"downstream"]
["chr8","LNC_005380","XLOC_054216","lncRNA",12173296,12173547,"-","Zm00001d007992_T001","Zm00001d007992",null,12206708,12207526,"-",33160,"downstream"]
["chr5","LNC_003439","XLOC_034576","lncRNA",11770274,11770844,"+","Zm00001d013442_T083","Zm00001d013442","sp|Q9SXA1|P4KA1_ARATH Phosphatidylinositol 4-kinase alpha 1 OS=Arabidopsis thaliana GN=PI4KA1 PE=1 SV=2//0",11682361,11708965,"+",61308,"downstream"]
["chr5","LNC_003439","XLOC_034576","lncRNA",11770274,11770844,"+","Zm00001d013442_T027","Zm00001d013442","sp|Q9SXA1|P4KA1_ARATH Phosphatidylinositol 4-kinase alpha 1 OS=Arabidopsis thaliana GN=PI4KA1 PE=1 SV=2//0",11681846,11708540,"+",61733,"downstream"]
["chr5","LNC_003437","XLOC_034540","lncRNA",10151393,10152075,"+","Zm00001d013380_T033","Zm00001d013380","sp|F4KDH9|FIPS5_ARATH FIP1[V]-like protein OS=Arabidopsis thaliana GN=FIPS5 PE=1 SV=1//3.65137e-13",10052693,10059201,"+",92191,"downstream"]
["chr5","LNC_003437","XLOC_034540","lncRNA",10151393,10152075,"+","Zm00001d013380_T022","Zm00001d013380","sp|F4KDH9|FIPS5_ARATH FIP1[V]-like protein OS=Arabidopsis thaliana GN=FIPS5 PE=1 SV=1//3.65137e-13",10041504,10059601,"+",91791,"downstream"]
["chr5","LNC_003431","XLOC_034480","lncRNA",7314225,7314512,"+","Zm00001d013262_T001","Zm00001d013262","sp|P93528|PHYC_SORBI Phytochrome C OS=Sorghum bicolor GN=PHYC PE=2 SV=1//0",7372367,7382139,"-",57854,"downstream"]
["chr5","LNC_003431","XLOC_034480","lncRNA",7314225,7314512,"+","Zm00001d013259_T001","Zm00001d013259",null,7240613,7257775,"+",56449,"downstream"]
["chr8","LNC_005651","XLOC_056622","lncRNA",177557533,177557889,"-","Zm00001d012634_T012","Zm00001d012634","sp|Q9Z160|COG1_MOUSE Conserved oligomeric Golgi complex subunit 1 OS=Mus musculus GN=Cog1 PE=1 SV=3//7.9904e-17",177537476,177544363,"-",13169,"upstream"]
["chr8","LNC_005651","XLOC_056622","lncRNA",177557533,177557889,"-","Zm00001d008163_T001","Zm00001d008163",null,177501275,177501638,"+",55894,"downstream"]
["chr8","LNC_005652","XLOC_056655","lncRNA",178987320,178987572,"-","Zm00001d012708_T003","Zm00001d012708","sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana GN=EMB1417 PE=2 SV=1//1.13502e-80",179043618,179046513,"+",56045,"upstream"]
["chr8","LNC_005655","XLOC_056681","lncRNA",179886209,179886416,"-","Zm00001d012752_T001","Zm00001d012752","sp|F4HPR5|DRP5A_ARATH Dynamin-related protein 5A OS=Arabidopsis thaliana GN=DRP5A PE=2 SV=1//1.84016e-65",179798348,179803543,"+",82665,"downstream"]
["chr8","LNC_005655","XLOC_056681","lncRNA",179886209,179886416,"-","Zm00001d012755_T047","Zm00001d012755","sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE=1 SV=3//4.28116e-26",179871428,179883607,"+",2601,"downstream"]
["chr3","LNC_002391","XLOC_023677","lncRNA",205898703,205899010,"+","Zm00001d043649_T033","Zm00001d043649","sp|Q9ASQ6|Y1972_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3//5.05693e-21",205975517,205980069,"-",76506,"downstream"]
["chr3","LNC_002391","XLOC_023677","lncRNA",205898703,205899010,"+","Zm00001d043649_T062","Zm00001d043649","sp|Q9ASQ6|Y1972_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3//5.05693e-21",205975633,205980100,"-",76622,"downstream"]
["chr3","LNC_002397","XLOC_023698","lncRNA",207082167,207082441,"+","Zm00001d043676_T001","Zm00001d043676",null,206998604,206998675,"-",83491,"upstream"]
["chr3","LNC_002398","XLOC_023715","lncRNA",208044551,208052023,"+","Zm00001d043707_T002","Zm00001d043707","sp|Q8VZV9|PTA7_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1//3.44218e-35",207957925,207962301,"+",82249,"downstream"]
["chr4","LNC_003383","XLOC_033792","lncRNA",232101901,232102151,"-","Zm00001d053450_T028","Zm00001d053450","sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2//3.12511e-17",232067340,232077040,"+",24860,"downstream"]
["chr4","LNC_003383","XLOC_033792","lncRNA",232101901,232102151,"-","Zm00001d053450_T019","Zm00001d053450","sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2//3.12511e-17",232067340,232076982,"+",24918,"downstream"]
["chr4","LNC_003384","XLOC_033846","lncRNA",232530825,232531414,"-","Zm00001d053467_T001","Zm00001d053467",null,232446967,232447039,"-",83785,"upstream"]
["chr4","LNC_003387","XLOC_033873","lncRNA",233618154,233618534,"-","Zm00001d053544_T001","Zm00001d053544","sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=PUB4 PE=2 SV=1//0",233597108,233599306,"+",18847,"downstream"]
["chr4","LNC_003389","XLOC_033877","lncRNA",233634706,233634961,"-","Zm00001d053546_T001","Zm00001d053546",null,233602099,233602170,"+",32535,"downstream"]
["chr9","LNC_006099","XLOC_060571","lncRNA",117154931,117155236,"-","Zm00001d047068_T001","Zm00001d047068","sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2//1.86536e-14",117142956,117144113,"-",10817,"upstream"]
["chr9","LNC_006095","XLOC_060541","lncRNA",116038822,116039209,"-","Zm00001d047030_T082","Zm00001d047030",null,115978086,115984075,"-",54746,"upstream"]
["chr9","LNC_006092","XLOC_060529","lncRNA",115011295,115011889,"-","Zm00001d047003_T002","Zm00001d047003",null,114946402,114947166,"-",64128,"upstream"]
["chr6","LNC_004529","XLOC_045288","lncRNA",137742671,137743104,"-","Zm00001d037788_T001","Zm00001d037788",null,137841316,137841387,"-",98211,"downstream"]
["chr6","LNC_004525","XLOC_045265","lncRNA",136112825,136113795,"-","Zm00001d037743_T001","Zm00001d037743",null,136122781,136123527,"+",8985,"upstream"]
["chr1","LNC_000537","XLOC_005939","lncRNA",76494916,76495213,"-","Zm00001d022760_T001","Zm00001d022760",null,76521443,76521692,"+",26229,"upstream"]
["chr1","LNC_000530","XLOC_005872","lncRNA",70224722,70225757,"-","Zm00001d029432_T001","Zm00001d029432","sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2//2.95383e-24",70227975,70231684,"+",2217,"upstream"]
["chr5","LNC_003946","XLOC_040111","lncRNA",184907650,184909701,"-","Zm00001d017086_T001","Zm00001d017086",null,184913749,184914231,"+",4047,"upstream"]
["chr5","LNC_003944","XLOC_040103","lncRNA",184435882,184436123,"-","Zm00001d017072_T001","Zm00001d017072","sp|Q5RC94|NBR1_PONAB Next to BRCA1 gene 1 protein OS=Pongo abelii GN=NBR1 PE=2 SV=1//2.96738e-16",184389616,184394455,"-",41426,"upstream"]
["chr1","LNC_000147","XLOC_001773","lncRNA",110395678,110416825,"+","Zm00001d030173_T016","Zm00001d030173","sp|Q9ASQ5|CRCK3_ARATH Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana GN=CRCK3 PE=2 SV=1//5.36389e-52",110381782,110388153,"-",7524,"upstream"]
["chr1","LNC_000146","XLOC_001751","lncRNA",108199566,108200503,"+","Zm00001d030133_T002","Zm00001d030133","sp|Q9FVQ5|CSCL1_ARATH CSC1-like protein At1g32090 OS=Arabidopsis thaliana GN=At1g32090 PE=1 SV=1//1.75402e-27",108282884,108288953,"-",82380,"downstream"]
["chr9","LNC_005995","XLOC_059820","lncRNA",45640546,45641192,"-","Zm00001d045887_T004","Zm00001d045887","sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1//3.12148e-59",45732153,45749295,"+",90960,"upstream"]
["chr2","LNC_001810","XLOC_018020","lncRNA",37353687,37358620,"-","Zm00001d003236_T001","Zm00001d003236",null,37257614,37257940,"+",95746,"downstream"]
["chr7","LNC_004735","XLOC_047389","lncRNA",110063878,110064354,"+","Zm00001d020378_T002","Zm00001d020378","sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9 OS=Arabidopsis thaliana GN=IP5P9 PE=1 SV=1//9.16422e-42",110059148,110061879,"-",1998,"upstream"]
["chr7","LNC_004731","XLOC_047363","lncRNA",108349756,108350024,"+","Zm00001d020348_T001","Zm00001d020348",null,108322505,108323755,"+",26000,"downstream"]
["chr1","LNC_000855","XLOC_008805","lncRNA",290191627,290192941,"-","Zm00001d034340_T001","Zm00001d034340","sp|Q8H5D4|PLP3_ORYSJ Patatin-like protein 3 OS=Oryza sativa subsp. japonica GN=PLP3 PE=3 SV=1//8.30355e-88",290229241,290231041,"-",36299,"downstream"]
["chr1","LNC_000854","XLOC_008805","lncRNA",290191627,290192941,"-","Zm00001d034336_T001","Zm00001d034336",null,290154656,290158881,"+",32745,"downstream"]
["chr1","LNC_000856","XLOC_008805","lncRNA",290192556,290192941,"-","Zm00001d034337_T004","Zm00001d034337","sp|O23685|AP1S2_ARATH AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana GN=AAP19-2 PE=2 SV=1//6.56128e-10",290196987,290202180,"-",4045,"downstream"]
["chr1","LNC_000850","XLOC_008723","lncRNA",286703378,286703606,"-","Zm00001d034204_T002","Zm00001d034204","sp|Q38914|ANT_ARATH AP2-like ethylene-responsive transcription factor ANT OS=Arabidopsis thaliana GN=ANT PE=1 SV=2//1.27647e-07",286726372,286730435,"+",22765,"upstream"]
["chr1","LNC_000859","XLOC_008834","lncRNA",291771860,291772554,"-","Zm00001d034394_T001","Zm00001d034394","sp|Q8RWF4|NIPA8_ARATH Probable magnesium transporter NIPA8 OS=Arabidopsis thaliana GN=At3g26670 PE=2 SV=1//1.96594e-50",291815839,291817246,"+",43284,"upstream"]
["chr5","LNC_003787","XLOC_038480","lncRNA",41046650,41048188,"-","Zm00001d014330_T014","Zm00001d014330","sp|Q9C5J9|Y5483_ARATH Uncharacterized GTP-binding protein At5g64813 OS=Arabidopsis thaliana GN=At5g64813 PE=1 SV=1//3.07364e-99",41110661,41123892,"-",62472,"downstream"]
["chr5","LNC_003787","XLOC_038480","lncRNA",41046650,41048188,"-","Zm00001d014324_T005","Zm00001d014324","sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana GN=At1g02270 PE=2 SV=2//1.03031e-133",41031211,41035865,"+",10784,"downstream"]
["chr1","LNC_000709","XLOC_007276","lncRNA",199524162,199526722,"-","Zm00001d031723_T002","Zm00001d031723","sp|Q6S4P4|RF2B_ORYSJ Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=2//3.00288e-47",199502427,199506388,"+",17773,"downstream"]
["chr1","LNC_000708","XLOC_007276","lncRNA",199524162,199525741,"-","Zm00001d031724_T025","Zm00001d031724","sp|Q8GU82|AB45G_ORYSJ ABC transporter G family member 45 OS=Oryza sativa subsp. japonica GN=ABCG45 PE=2 SV=2//0",199521586,199526297,"+",-1580,"antisense"]
["chr1","LNC_000706","XLOC_007255","lncRNA",198495116,198495349,"-","Zm00001d031678_T003","Zm00001d031678","sp|Q3LXA7|RBR3_MAIZE Retinoblastoma-related protein 3 OS=Zea mays GN=RBR3 PE=2 SV=1//0",198531549,198538490,"-",36199,"downstream"]
["chr1","LNC_000701","XLOC_007230","lncRNA",196536441,196540386,"-","Zm00001d031621_T003","Zm00001d031621","sp|Q9T0I8|MTN1_ARATH 5&apos;-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 OS=Arabidopsis thaliana GN=MTN1 PE=1 SV=1//3.09985e-12",196575104,196584218,"+",34717,"upstream"]
["chr1","LNC_000703","XLOC_007232","lncRNA",196857532,196857860,"-","Zm00001d031628_T001","Zm00001d031628","sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1//4.68983e-32",196885706,196886306,"+",27845,"upstream"]
["chr1","LNC_000703","XLOC_007232","lncRNA",196857532,196857860,"-","Zm00001d031632_T019","Zm00001d031632","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//1.17097e-129",196895361,196904756,"+",37500,"upstream"]
["chr1","LNC_000702","XLOC_007231","lncRNA",196847600,196847882,"-","Zm00001d031632_T015","Zm00001d031632","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//1.17097e-129",196895361,196904755,"+",47478,"upstream"]
["chr1","LNC_000702","XLOC_007231","lncRNA",196847600,196847882,"-","Zm00001d031632_T037","Zm00001d031632","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//1.17097e-129",196895361,196908018,"+",47478,"upstream"]
["chr3","LNC_002566","XLOC_025389","lncRNA",88813818,88814075,"-","Zm00001d040990_T001","Zm00001d040990",null,88731145,88731754,"-",82063,"upstream"]
["chr9","LNC_005746","XLOC_057553","lncRNA",58076318,58076594,"+","Zm00001d046039_T035","Zm00001d046039","sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1//2.23826e-19",58107514,58194898,"-",30919,"downstream"]
["chr4","LNC_003175","XLOC_031610","lncRNA",52917147,52917350,"-","Zm00001d049922_T002","Zm00001d049922","sp|Q67Y83|SCP51_ARATH Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2//2.62366e-146",52871529,52875357,"-",41789,"upstream"]
["chr1","LNC_000255","XLOC_002556","lncRNA",189761702,189762387,"+","Zm00001d031428_T002","Zm00001d031428","sp|Q6UTZ2|MGDG2_ORYSJ Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2//0",189808691,189811383,"-",46303,"downstream"]
["chr10","LNC_001303","XLOC_012953","lncRNA",133375559,133376624,"-","Zm00001d025902_T001","Zm00001d025902",null,133410372,133410444,"+",33747,"upstream"]
["chr10","LNC_001305","XLOC_012983","lncRNA",134980429,134981773,"-","Zm00001d025963_T002","Zm00001d025963","sp|Q9LRB0|LCBK1_ARATH Sphingoid long-chain bases kinase 1 OS=Arabidopsis thaliana GN=LCBK1 PE=1 SV=1//0",134955202,134961784,"+",18644,"downstream"]
["chr10","LNC_001305","XLOC_012983","lncRNA",134980429,134981773,"-","Zm00001d025960_T004","Zm00001d025960","sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1//1.85141e-13",134919047,134922822,"-",57606,"upstream"]
["chr10","LNC_001038","XLOC_010453","lncRNA",114084501,114084716,"+","Zm00001d025323_T004","Zm00001d025323","sp|Q7XVF9|P2C39_ORYSJ Probable protein phosphatase 2C 39 OS=Oryza sativa subsp. japonica GN=Os04g0403701 PE=2 SV=2//0",114052842,114057299,"-",27201,"upstream"]
["chr10","LNC_001039","XLOC_010463","lncRNA",114721874,114722080,"+","Zm00001d025340_T006","Zm00001d025340","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//4.39237e-36",114737539,114738325,"-",15458,"downstream"]
["chr6","LNC_004284","XLOC_043394","lncRNA",168360979,168363238,"+","Zm00001d038995_T001","Zm00001d038995","sp|Q9FZ48|UBC36_ARATH Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1//4.31981e-103",168419978,168422942,"+",56739,"upstream"]
["chr6","LNC_004285","XLOC_043425","lncRNA",169333200,169334489,"+","Zm00001d039051_T003","Zm00001d039051","sp|Q93YP9|ERDL4_ARATH Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1//0",169294006,169306436,"+",26763,"downstream"]
["chr10","LNC_001159","XLOC_011667","lncRNA",26120630,26121123,"-","Zm00001d023882_T001","Zm00001d023882",null,26204689,26207745,"-",83565,"downstream"]
["chr6","LNC_004281","XLOC_043334","lncRNA",166623185,166623836,"+","Zm00001d038894_T002","Zm00001d038894","sp|Q9S713|STT7_ARATH Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana GN=STN7 PE=1 SV=1//0",166576973,166590299,"-",32885,"upstream"]
["chr6","LNC_004283","XLOC_043362","lncRNA",167331724,167333292,"+","Zm00001d038936_T001","Zm00001d038936","sp|Q6I628|PSS2_ORYSJ CDP-diacylglycerol--serine O-phosphatidyltransferase 2 OS=Oryza sativa subsp. japonica GN=PSS2 PE=2 SV=2//5.30929e-09",167317799,167323586,"+",8137,"downstream"]
["chr10","LNC_001156","XLOC_011630","lncRNA",23607266,23607590,"-","Zm00001d023825_T002","Zm00001d023825","sp|Q8RWU5|FBL3_ARATH F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2 SV=1//2.86032e-07",23585499,23587795,"-",19470,"upstream"]
["chr5","LNC_003881","XLOC_039402","lncRNA",124886564,124887703,"-","Zm00001d015837_T002","Zm00001d015837","sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2//1.02178e-28",124870872,124878713,"+",7850,"downstream"]
["chr5","LNC_003774","XLOC_038413","lncRNA",35801372,35801581,"-","Zm00001d014189_T002","Zm00001d014189",null,35716861,35723681,"+",77690,"downstream"]
["chr5","LNC_003771","XLOC_038363","lncRNA",32709873,32710380,"-","Zm00001d014109_T007","Zm00001d014109",null,32778149,32811659,"-",67768,"downstream"]
["chr1","LNC_000281","XLOC_002866","lncRNA",208174451,208174671,"+","Zm00001d031963_T003","Zm00001d031963","sp|Q55535|Y328_SYNY3 Putative low molecular weight protein-tyrosine-phosphatase slr0328 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0328 PE=3 SV=1//5.61886e-43",208073601,208078200,"-",96250,"upstream"]
["chr1","LNC_000283","XLOC_002895","lncRNA",209694045,209694364,"+","Zm00001d032022_T004","Zm00001d032022","sp|Q6ZJJ0|BGA11_ORYSJ Beta-galactosidase 11 OS=Oryza sativa subsp. japonica GN=Os08g0549200 PE=2 SV=1//5.18034e-87",209620860,209625239,"-",68805,"upstream"]
["chr5","LNC_003778","XLOC_038460","lncRNA",39733075,39738046,"-","Zm00001d014291_T001","Zm00001d014291","sp|Q339D2|P2C71_ORYSJ Probable protein phosphatase 2C 71 OS=Oryza sativa subsp. japonica GN=Os10g0370000 PE=2 SV=1//1.23637e-09",39715418,39722456,"+",10618,"downstream"]
["chr4","LNC_002829","XLOC_028219","lncRNA",42043697,42043994,"+","Zm00001d049734_T003","Zm00001d049734","sp|Q9XID0|FAB1D_ARATH Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana GN=FAB1D PE=3 SV=1//3.5418e-63",42094954,42102137,"+",50959,"upstream"]
["chr4","LNC_002826","XLOC_028208","lncRNA",41292211,41292432,"+","Zm00001d049719_T001","Zm00001d049719",null,41374215,41375112,"-",81782,"downstream"]
["chr4","LNC_003410","XLOC_034059","lncRNA",242253852,242254198,"-","Zm00001d053857_T005","Zm00001d053857","sp|Q9SF16|TCPH_ARATH T-complex protein 1 subunit eta OS=Arabidopsis thaliana GN=CCT7 PE=1 SV=1//1.39431e-46",242293385,242298479,"-",39186,"downstream"]
["chr4","LNC_003411","XLOC_034065","lncRNA",242571669,242572294,"-","Zm00001d053872_T004","Zm00001d053872","sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1//0",242631236,242643530,"+",58941,"upstream"]
["chr4","LNC_003413","XLOC_034132","lncRNA",244807192,244810077,"-","Zm00001d053994_T005","Zm00001d053994","sp|F4IHJ0|SFH8_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1//0",244798741,244803302,"+",3889,"downstream"]
["chr4","LNC_003413","XLOC_034132","lncRNA",244807192,244810077,"-","Zm00001d054001_T009","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244881916,244901087,"+",71838,"upstream"]
["chr4","LNC_003414","XLOC_034132","lncRNA",244807192,244810082,"-","Zm00001d053990_T001","Zm00001d053990",null,244767767,244767853,"+",39338,"downstream"]
["chr4","LNC_003414","XLOC_034132","lncRNA",244807192,244810082,"-","Zm00001d054001_T017","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244889026,244901087,"+",78943,"upstream"]
["chr4","LNC_003414","XLOC_034132","lncRNA",244807192,244810082,"-","Zm00001d054001_T029","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244893472,244901052,"+",83389,"upstream"]
["chr4","LNC_003415","XLOC_034132","lncRNA",244807192,244810114,"-","Zm00001d053994_T005","Zm00001d053994","sp|F4IHJ0|SFH8_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1//0",244798741,244803302,"+",3889,"downstream"]
["chr4","LNC_003415","XLOC_034132","lncRNA",244807192,244810114,"-","Zm00001d054001_T009","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244881916,244901087,"+",71801,"upstream"]
["chr4","LNC_003416","XLOC_034132","lncRNA",244807192,244810114,"-","Zm00001d053990_T001","Zm00001d053990",null,244767767,244767853,"+",39338,"downstream"]
["chr4","LNC_003416","XLOC_034132","lncRNA",244807192,244810114,"-","Zm00001d054001_T017","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244889026,244901087,"+",78911,"upstream"]
["chr4","LNC_003417","XLOC_034132","lncRNA",244807192,244810144,"-","Zm00001d053997_T012","Zm00001d053997","sp|Q5Z9J0|MPK12_ORYSJ Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2//4.06229e-11",244821793,244829727,"-",11648,"downstream"]
["chr4","LNC_003417","XLOC_034132","lncRNA",244807192,244810144,"-","Zm00001d053994_T005","Zm00001d053994","sp|F4IHJ0|SFH8_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1//0",244798741,244803302,"+",3889,"downstream"]
["chr4","LNC_003417","XLOC_034132","lncRNA",244807192,244810144,"-","Zm00001d054001_T028","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244891439,244901002,"+",81294,"upstream"]
["chr4","LNC_003418","XLOC_034141","lncRNA",245012507,245012831,"-","Zm00001d054005_T004","Zm00001d054005","sp|F4I562|AP3M_ARATH AP-3 complex subunit mu OS=Arabidopsis thaliana GN=AP3M PE=1 SV=1//0",245031731,245044871,"+",18899,"upstream"]
["chr4","LNC_003419","XLOC_034203","lncRNA",246840903,246841172,"-","Zm00001d054106_T011","Zm00001d054106","sp|Q67IX6|PDI14_ORYSJ Protein disulfide isomerase-like 1-4 OS=Oryza sativa subsp. japonica GN=PDIL1-4 PE=2 SV=1//1.12212e-11",246775544,246780801,"-",60101,"upstream"]
["chr9","LNC_006073","XLOC_060350","lncRNA",102234574,102234928,"-","Zm00001d046683_T019","Zm00001d046683","sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2//4.86741e-28",102315432,102321440,"+",80503,"upstream"]
["chr9","LNC_006076","XLOC_060373","lncRNA",103570071,103570279,"-","Zm00001d046722_T002","Zm00001d046722","sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3//3.82456e-50",103539957,103559119,"+",10951,"downstream"]
["chr6","LNC_004501","XLOC_045019","lncRNA",120671476,120673255,"-","Zm00001d037315_T020","Zm00001d037315","sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1//1.29823e-75",120627376,120635128,"+",36347,"downstream"]
["chr6","LNC_004506","XLOC_045075","lncRNA",124979637,124979863,"-","Zm00001d037415_T001","Zm00001d037415","sp|Q9SZ15|LIP5_ARATH Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Arabidopsis thaliana GN=LIP5 PE=1 SV=1//2.91533e-10",124907191,124909785,"-",69851,"upstream"]
["chr6","LNC_004504","XLOC_045051","lncRNA",123544770,123545046,"-","Zm00001d037377_T052","Zm00001d037377","sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3//1.29102e-51",123567788,123583960,"-",22741,"downstream"]
["chr6","LNC_004509","XLOC_045084","lncRNA",125348219,125348430,"-","Zm00001d037437_T001","Zm00001d037437","sp|O48653|DPOLA_ORYSJ DNA polymerase alpha catalytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0868300 PE=2 SV=2//1.83196e-08",125370712,125373061,"+",22281,"upstream"]
["chr7","LNC_005041","XLOC_050517","lncRNA",158012370,158012602,"-","Zm00001d021609_T043","Zm00001d021609","sp|Q3UQU0|BRD9_MOUSE Bromodomain-containing protein 9 OS=Mus musculus GN=Brd9 PE=2 SV=1//7.50382e-11",158038658,158043826,"+",26055,"upstream"]
["chr7","LNC_005043","XLOC_050534","lncRNA",158600954,158601244,"-","Zm00001d021633_T005","Zm00001d021633","sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1//1.82528e-22",158634600,158639124,"+",33355,"upstream"]
["chr7","LNC_005046","XLOC_050545","lncRNA",159029617,159030694,"-","Zm00001d021648_T064","Zm00001d021648",null,159047638,159052378,"+",16943,"upstream"]
["chr7","LNC_005046","XLOC_050545","lncRNA",159029617,159030694,"-","Zm00001d021648_T043","Zm00001d021648",null,159047586,159052455,"+",16891,"upstream"]
["chr1","LNC_000518","XLOC_005741","lncRNA",61631769,61632041,"-","Zm00001d029190_T001","Zm00001d029190","sp|Q8L9C4|KCR1_ARATH Very-long-chain 3-oxoacyl-CoA reductase 1 OS=Arabidopsis thaliana GN=KCR1 PE=1 SV=1//2.31302e-73",61638930,61642292,"+",6888,"upstream"]
["chr1","LNC_000518","XLOC_005741","lncRNA",61631769,61632041,"-","Zm00001d029188_T003","Zm00001d029188","sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1//6.2518e-11",61566224,61570367,"+",61401,"downstream"]
["chr1","LNC_000510","XLOC_005646","lncRNA",54556142,54556387,"-","Zm00001d029004_T113","Zm00001d029004","sp|Q8SAB7|SPK1_ARATH Guanine nucleotide exchange factor SPIKE 1 OS=Arabidopsis thaliana GN=SPK1 PE=1 SV=1//0",54465756,54480298,"+",75843,"downstream"]
["chr1","LNC_000511","XLOC_005654","lncRNA",55095471,55095741,"-","Zm00001d029020_T001","Zm00001d029020","sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1//5.17904e-40",55053507,55060129,"+",35341,"downstream"]
["chr7","LNC_005032","XLOC_050441","lncRNA",153410505,153410996,"-","Zm00001d021484_T005","Zm00001d021484","sp|Q9FFB3|VP241_ARATH Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana GN=VPS24-1 PE=1 SV=1//1.98e-67",153509816,153516659,"-",98819,"downstream"]
["chr7","LNC_005036","XLOC_050476","lncRNA",155430169,155430965,"-","Zm00001d021541_T042","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155410616,155420312,"+",9856,"downstream"]
["chr7","LNC_005036","XLOC_050476","lncRNA",155430169,155430965,"-","Zm00001d021541_T038","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155406764,155420422,"+",9746,"downstream"]
["chr5","LNC_003963","XLOC_040251","lncRNA",192143263,192143656,"-","Zm00001d017296_T003","Zm00001d017296","sp|Q9ZQ34|Y2433_ARATH Uncharacterized protein At2g24330 OS=Arabidopsis thaliana GN=At2g24330 PE=2 SV=1//1.46752e-16",192042699,192048000,"+",95262,"downstream"]
["chr5","LNC_003963","XLOC_040251","lncRNA",192143263,192143656,"-","Zm00001d017303_T004","Zm00001d017303","sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2 OS=Arabidopsis thaliana GN=UPF2 PE=2 SV=1//0",192174078,192193509,"-",30421,"downstream"]
["chr5","LNC_003965","XLOC_040264","lncRNA",192841357,192841571,"-","Zm00001d017326_T001","Zm00001d017326","sp|Q9LHJ2|U82A1_ARATH UDP-glycosyltransferase 82A1 OS=Arabidopsis thaliana GN=UGT82A1 PE=2 SV=1//8.39603e-115",192888885,192890618,"-",47313,"downstream"]
["chr5","LNC_003967","XLOC_040298","lncRNA",193870157,193870423,"-","Zm00001d017377_T001","Zm00001d017377","sp|Q0DZ85|EXB16_ORYSJ Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=3 SV=1//1.0127e-135",193862002,193866500,"+",3656,"downstream"]
["chr5","LNC_003967","XLOC_040298","lncRNA",193870157,193870423,"-","Zm00001d017382_T002","Zm00001d017382","sp|O80839|PLI2A_ARATH LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1//8.62051e-21",193931037,193932598,"-",60613,"downstream"]
["chr3","LNC_002612","XLOC_025722","lncRNA",127234436,127234636,"-","Zm00001d041563_T001","Zm00001d041563","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//6.87981e-22",127274051,127280589,"+",39414,"upstream"]
["chr3","LNC_002619","XLOC_025796","lncRNA",134441123,134441426,"-","Zm00001d041710_T007","Zm00001d041710","sp|O23732|GSHB_BRAJU Glutathione synthetase, chloroplastic OS=Brassica juncea GN=GSH2 PE=2 SV=1//5.53241e-13",134445202,134457471,"+",3775,"upstream"]
["chr6","LNC_004344","XLOC_043798","lncRNA",23692629,23701115,"-","Zm00001d035375_T002","Zm00001d035375","sp|P69242|RPOT3_NICSY DNA-directed RNA polymerase 3, chloroplastic OS=Nicotiana sylvestris GN=RPOT3 PE=2 SV=1//7.6245e-17",23621898,23622998,"+",69630,"downstream"]
["chr2","LNC_001987","XLOC_019508","lncRNA",173466261,173467275,"-","Zm00001d005421_T014","Zm00001d005421","sp|Q9ATM8|PIP22_MAIZE Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1//0",173379017,173382467,"+",83793,"downstream"]
["chr2","LNC_001830","XLOC_018249","lncRNA",53089076,53089334,"-","Zm00001d003663_T001","Zm00001d003663","sp|Q8DJB3|GRPE_THEEB Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1//3.15912e-37",53137983,53140425,"+",48648,"upstream"]
["chr2","LNC_001838","XLOC_018322","lncRNA",56799078,56799295,"-","Zm00001d003731_T001","Zm00001d003731",null,56794172,56794244,"+",4833,"downstream"]
["chr7","LNC_004757","XLOC_047520","lncRNA",124360621,124360892,"+","Zm00001d020603_T008","Zm00001d020603","sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1//2.06025e-11",124344594,124350978,"+",9642,"downstream"]
["chr7","LNC_004751","XLOC_047470","lncRNA",119981053,119981424,"+","Zm00001d020516_T001","Zm00001d020516","sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2//4.66969e-94",119982387,119992486,"-",962,"downstream"]
["chr9","LNC_006107","XLOC_060646","lncRNA",121088019,121088823,"-","Zm00001d047178_T004","Zm00001d047178","sp|O80612|APY6_ARATH Probable apyrase 6 OS=Arabidopsis thaliana GN=APY6 PE=2 SV=2//1.67485e-41",121078169,121082527,"+",5491,"downstream"]
["chr9","LNC_006106","XLOC_060631","lncRNA",120492658,120493198,"-","Zm00001d047166_T004","Zm00001d047166","sp|P55217|CGS1_ARATH Cystathionine gamma-synthase 1, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=1 SV=3//1.68288e-12",120520323,120525268,"-",27124,"downstream"]
["chr1","LNC_000876","XLOC_009069","lncRNA",303374622,303375913,"-","Zm00001d034832_T006","Zm00001d034832","sp|Q9LK39|AAE16_ARATH Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana GN=AAE16 PE=2 SV=1//4.3148e-16",303279393,303289233,"-",85388,"upstream"]
["chr1","LNC_000875","XLOC_009068","lncRNA",303373464,303373671,"-","Zm00001d034837_T001","Zm00001d034837","sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1 OS=Arabidopsis thaliana GN=KPNB1 PE=1 SV=1//1.77132e-22",303457380,303464429,"+",83708,"upstream"]
["chr1","LNC_000875","XLOC_009068","lncRNA",303373464,303373671,"-","Zm00001d034835_T001","Zm00001d034835",null,303405547,303411273,"+",31875,"upstream"]
["chr1","LNC_000872","XLOC_009047","lncRNA",302503167,302503419,"-","Zm00001d034804_T003","Zm00001d034804",null,302468906,302475499,"+",27667,"downstream"]
["chr1","LNC_000872","XLOC_009047","lncRNA",302503167,302503419,"-","Zm00001d034809_T021","Zm00001d034809","sp|Q9USM4|LUC7_SCHPO U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=usp106 PE=1 SV=1//6.78347e-12",302535613,302541338,"-",32193,"downstream"]
["chr1","LNC_000871","XLOC_009043","lncRNA",302450036,302450451,"-","Zm00001d034802_T001","Zm00001d034802","sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1//1.56177e-90",302452574,302453711,"-",2122,"downstream"]
["chr1","LNC_000871","XLOC_009043","lncRNA",302450036,302450451,"-","Zm00001d034808_T001","Zm00001d034808","sp|Q8VY91|RR6_ARATH 30S ribosomal protein S6 alpha, chloroplastic OS=Arabidopsis thaliana GN=RPS6 PE=2 SV=1//1.00198e-52",302533836,302535390,"+",83384,"upstream"]
["chr9","LNC_005933","XLOC_059358","lncRNA",12060224,12060809,"-","Zm00001d045085_T001","Zm00001d045085","sp|P55748|CBP22_HORVU Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1//2.02874e-20",12048353,12056997,"+",3226,"downstream"]
["chr9","LNC_005935","XLOC_059366","lncRNA",12450205,12450455,"-","Zm00001d045095_T001","Zm00001d045095",null,12380413,12381436,"-",68768,"upstream"]
["chr9","LNC_005939","XLOC_059395","lncRNA",14322207,14322666,"-","Zm00001d045147_T021","Zm00001d045147","sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa GN=DHX16 PE=3 SV=1//2.02784e-26",14236406,14273689,"-",48517,"upstream"]
["chr9","LNC_005938","XLOC_059385","lncRNA",14211214,14212100,"-","Zm00001d045147_T003","Zm00001d045147","sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa GN=DHX16 PE=3 SV=1//2.02784e-26",14236136,14273814,"-",24035,"downstream"]
["chr3","LNC_002583","XLOC_025486","lncRNA",100335513,100335801,"-","Zm00001d041142_T002","Zm00001d041142","sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1//8.8303e-53",100232730,100240533,"+",94979,"downstream"]
["chr3","LNC_002584","XLOC_025496","lncRNA",102143739,102144005,"-","Zm00001d041174_T001","Zm00001d041174",null,102147008,102147454,"+",3002,"upstream"]
["chr4","LNC_003197","XLOC_031810","lncRNA",73475908,73478025,"-","Zm00001d050208_T006","Zm00001d050208","sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1//0",73550518,73555353,"-",72492,"downstream"]
["chr4","LNC_003198","XLOC_031810","lncRNA",73476533,73478032,"-","Zm00001d050201_T001","Zm00001d050201","sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2//7.94041e-85",73396073,73397331,"+",79201,"downstream"]
["chr2","LNC_001584","XLOC_015262","lncRNA",124632577,124637060,"+","Zm00001d004641_T001","Zm00001d004641","sp|Q41852|RS21_MAIZE 40S ribosomal protein S21 OS=Zea mays GN=RPS21 PE=3 SV=1//3.25387e-28",124685332,124686327,"-",48271,"downstream"]
["chr10","LNC_001056","XLOC_010610","lncRNA",122554008,122554541,"+","Zm00001d025570_T004","Zm00001d025570","sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana GN=UBP4 PE=1 SV=2//8.81691e-10",122602836,122612949,"-",48294,"downstream"]
["chr10","LNC_001052","XLOC_010581","lncRNA",121065107,121065394,"+","Zm00001d025519_T002","Zm00001d025519","sp|Q9ZUF7|LOR6_ARATH Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910 PE=2 SV=1//1.76119e-60",121061028,121062528,"+",2578,"downstream"]
["chr10","LNC_001138","XLOC_011406","lncRNA",6041008,6044351,"-","Zm00001d023046_T001","Zm00001d023046",null,5950817,5951626,"+",89381,"downstream"]
["chr10","LNC_001135","XLOC_011381","lncRNA",4766414,4766843,"-","Zm00001d023404_T001","Zm00001d023404","sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1//2.74642e-156",4839680,4842257,"+",72836,"upstream"]
["chr10","LNC_001136","XLOC_011395","lncRNA",5321060,5321498,"-","Zm00001d023425_T001","Zm00001d023425","sp|O24585|CRI4_MAIZE Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1//0",5235583,5238288,"+",82771,"downstream"]
["chr10","LNC_001131","XLOC_011336","lncRNA",3633172,3633594,"-","Zm00001d023337_T007","Zm00001d023337","sp|Q8LG98|OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=2//4.2324e-12",3652022,3660708,"+",18427,"upstream"]
["chr10","LNC_001130","XLOC_011332","lncRNA",3491609,3491906,"-","Zm00001d023326_T049","Zm00001d023326","sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1//1.79131e-98",3431619,3434997,"-",56611,"upstream"]
["chr10","LNC_001132","XLOC_011342","lncRNA",3812524,3813011,"-","Zm00001d023343_T002","Zm00001d023343","sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1//1.6709e-42",3824778,3825701,"-",11766,"downstream"]
["chr5","LNC_003759","XLOC_038247","lncRNA",24414360,24414895,"-","Zm00001d013907_T001","Zm00001d013907","sp|P82900|NLT2G_WHEAT Non-specific lipid-transfer protein 2G OS=Triticum aestivum PE=1 SV=2//8.41411e-19",24372950,24373240,"+",41119,"downstream"]
["chr5","LNC_003757","XLOC_038239","lncRNA",24023899,24024174,"-","Zm00001d013890_T005","Zm00001d013890",null,23979995,23989310,"+",34588,"downstream"]
["chr5","LNC_003757","XLOC_038239","lncRNA",24023899,24024174,"-","Zm00001d013891_T026","Zm00001d013891","sp|Q8L5R3|TBCD_ARATH Tubulin-folding cofactor D OS=Arabidopsis thaliana GN=TFCD PE=2 SV=1//9.79203e-108",23992568,24008604,"+",15294,"downstream"]
["chr5","LNC_003753","XLOC_038190","lncRNA",20427174,20427523,"-","Zm00001d013796_T026","Zm00001d013796","sp|Q10HL3|DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica GN=DCL2A PE=2 SV=1//1.53238e-18",20375113,20391320,"-",35853,"upstream"]
["chr5","LNC_003753","XLOC_038190","lncRNA",20427174,20427523,"-","Zm00001d013796_T010","Zm00001d013796","sp|Q10HL3|DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica GN=DCL2A PE=2 SV=1//1.53238e-18",20375095,20392085,"-",35088,"upstream"]
["chr8","LNC_005343","XLOC_053782","lncRNA",173076615,173076908,"+","Zm00001d012360_T001","Zm00001d012360",null,172998398,172999372,"-",77242,"upstream"]
["chr1","LNC_000260","XLOC_002619","lncRNA",192888109,192888346,"+","Zm00001d031529_T005","Zm00001d031529","sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2//1.05903e-21",192960961,192969064,"-",72614,"downstream"]
["chr8","LNC_005341","XLOC_053771","lncRNA",172720285,172721614,"+","Zm00001d012346_T001","Zm00001d012346","sp|Q84JU6|HOS1_ARATH E3 ubiquitin-protein ligase HOS1 OS=Arabidopsis thaliana GN=HOS1 PE=1 SV=1//4.3249e-25",172799166,172803581,"+",77551,"upstream"]
["chr8","LNC_005344","XLOC_053788","lncRNA",173332262,173332867,"+","Zm00001d012381_T002","Zm00001d012381",null,173254593,173259963,"-",72298,"upstream"]
["chr8","LNC_005345","XLOC_053790","lncRNA",173375148,173377605,"+","Zm00001d012391_T010","Zm00001d012391","sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2//2.22349e-138",173415235,173422877,"-",37629,"downstream"]
["chr8","LNC_005349","XLOC_053927","lncRNA",177733459,177733742,"+","Zm00001d012643_T007","Zm00001d012643","sp|Q9FG93|MNS4_ARATH Probable alpha-mannosidase I MNS4 OS=Arabidopsis thaliana GN=MNS4 PE=2 SV=1//1.24806e-07",177712284,177732830,"-",628,"upstream"]
["chr4","LNC_002807","XLOC_027939","lncRNA",24458433,24458685,"+","Zm00001d049282_T001","Zm00001d049282","sp|Q9SCP6|U73D1_ARATH UDP-glycosyltransferase 73D1 OS=Arabidopsis thaliana GN=UGT73D1 PE=3 SV=1//1.22996e-48",24379653,24381203,"+",77229,"downstream"]
["chr4","LNC_002802","XLOC_027884","lncRNA",19769019,19774773,"+","Zm00001d049188_T006","Zm00001d049188","sp|O81395|DRTS_MAIZE Bifunctional dihydrofolate reductase-thymidylate synthase OS=Zea mays GN=DRTS PE=2 SV=1//0",19758451,19764993,"-",4025,"upstream"]
["chr4","LNC_002802","XLOC_027884","lncRNA",19769019,19774773,"+","Zm00001d049190_T009","Zm00001d049190","sp|B8BKI8|MCM2_ORYSI DNA replication licensing factor MCM2 OS=Oryza sativa subsp. indica GN=OsI_36121 PE=3 SV=1//3.72763e-37",19769833,19776143,"-",-4941,"antisense"]
["chr9","LNC_005691","XLOC_057117","lncRNA",20238188,20238494,"+","Zm00001d045379_T003","Zm00001d045379","sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta&apos;-1 OS=Oryza sativa subsp. japonica GN=Os06g0143900 PE=2 SV=1//0",20170773,20183175,"-",55012,"upstream"]
["chr9","LNC_005691","XLOC_057117","lncRNA",20238188,20238494,"+","Zm00001d045382_T001","Zm00001d045382","sp|Q80SY5|PR38B_MOUSE Pre-mRNA-splicing factor 38B OS=Mus musculus GN=Prpf38b PE=1 SV=1//5.85715e-33",20230899,20234937,"-",3250,"upstream"]
["chr6","LNC_004565","XLOC_045893","lncRNA",164646916,164649551,"-","Zm00001d038797_T003","Zm00001d038797","sp|Q8W1Y3|KP1_ARATH Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2//2.83244e-148",164581787,164587622,"+",59293,"downstream"]
["chr6","LNC_004567","XLOC_045929","lncRNA",166141890,166142195,"-","Zm00001d038864_T005","Zm00001d038864",null,166063079,166069204,"+",72685,"downstream"]
["chr6","LNC_004560","XLOC_045757","lncRNA",159509991,159510304,"-","Zm00001d038535_T006","Zm00001d038535","sp|O48558|RL30_MAIZE 60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1//1.12146e-13",159533768,159536078,"+",23463,"upstream"]
["chr6","LNC_004563","XLOC_045856","lncRNA",163509377,163509679,"-","Zm00001d038734_T002","Zm00001d038734","sp|A7ILC7|CLPX_XANP2 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=clpX PE=3 SV=1//9.20709e-18",163542891,163546725,"-",33211,"downstream"]
["chr6","LNC_004563","XLOC_045856","lncRNA",163509377,163509679,"-","Zm00001d038740_T001","Zm00001d038740","sp|Q9FZA2|AGP31_ARATH Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana GN=AGP31 PE=1 SV=1//1.9059e-08",163596670,163597704,"-",86990,"downstream"]
["chr6","LNC_004568","XLOC_045944","lncRNA",166658592,166659027,"-","Zm00001d038903_T001","Zm00001d038903","sp|Q5N9Q7|PTHM_ORYSJ Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1//1.07416e-83",166750125,166754016,"+",91097,"upstream"]
["chr3","LNC_002243","XLOC_022198","lncRNA",105977810,105978089,"+","Zm00001d041216_T002","Zm00001d041216","sp|P42743|UBC15_ARATH Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2//3.19285e-93",105946971,105964454,"+",13355,"downstream"]
["chr4","LNC_003033","XLOC_030157","lncRNA",203837154,203837437,"+","Zm00001d052893_T004","Zm00001d052893","sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3 OS=Arabidopsis thaliana GN=EML3 PE=1 SV=1//1.26302e-08",203852542,203855952,"+",15104,"upstream"]
["chr4","LNC_003036","XLOC_030207","lncRNA",206779780,206780165,"+","Zm00001d052974_T005","Zm00001d052974","sp|Q9ZQX6|ETOL1_ARATH ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL1 PE=1 SV=1//6.17759e-11",206846467,206850401,"+",66301,"upstream"]
["chr8","LNC_005108","XLOC_051263","lncRNA",5872937,5875626,"+","Zm00001d008343_T001","Zm00001d008343",null,5863420,5864319,"-",8617,"upstream"]
["chr7","LNC_004987","XLOC_049902","lncRNA",121682669,121683124,"-","Zm00001d020541_T004","Zm00001d020541","sp|Q4QR99|TGT_RAT Queuine tRNA-ribosyltransferase OS=Rattus norvegicus GN=Qtrt1 PE=2 SV=1//1.61596e-09",121685086,121693077,"+",1961,"upstream"]
["chr7","LNC_004988","XLOC_049904","lncRNA",121727795,121728532,"-","Zm00001d020541_T010","Zm00001d020541","sp|Q4QR99|TGT_RAT Queuine tRNA-ribosyltransferase OS=Rattus norvegicus GN=Qtrt1 PE=2 SV=1//1.61596e-09",121685444,121693070,"+",34724,"downstream"]
["chr8","LNC_005101","XLOC_051204","lncRNA",4415814,4416014,"+","Zm00001d008296_T001","Zm00001d008296",null,4472427,4473956,"-",56412,"downstream"]
["chr3","LNC_002631","XLOC_025970","lncRNA",146795532,146795803,"-","Zm00001d041994_T001","Zm00001d041994","sp|Q5HZV9|PP1R7_RAT Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus GN=Ppp1r7 PE=1 SV=1//1.75986e-06",146857953,146861740,"+",62149,"upstream"]
["chr8","LNC_005103","XLOC_051247","lncRNA",5200208,5201505,"+","Zm00001d008321_T029","Zm00001d008321","sp|Q5R4M2|ULK4_PONAB Serine/threonine-protein kinase ULK4 OS=Pongo abelii GN=ULK4 PE=2 SV=1//2.87797e-41",5127908,5133089,"+",67118,"downstream"]
["chr3","LNC_002636","XLOC_026032","lncRNA",149450110,149450330,"-","Zm00001d042066_T007","Zm00001d042066","sp|A5F5U6|BGAL_VIBC3 Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) GN=lacZ PE=3 SV=2//2.97884e-22",149521455,149548926,"-",71124,"downstream"]
["chr3","LNC_002635","XLOC_026004","lncRNA",147847155,147850769,"-","Zm00001d042027_T001","Zm00001d042027",null,147770790,147773690,"-",73464,"upstream"]
["chr3","LNC_002635","XLOC_026004","lncRNA",147847155,147850769,"-","Zm00001d042028_T019","Zm00001d042028",null,147774841,147787086,"-",60068,"upstream"]
["chr6","LNC_004361","XLOC_043833","lncRNA",24509119,24514863,"-","Zm00001d035405_T002","Zm00001d035405","sp|Q94B78|GCSP1_ARATH Glycine dehydrogenase (decarboxylating) 1, mitochondrial OS=Arabidopsis thaliana GN=GLDP1 PE=1 SV=2//5.13281e-25",24545079,24550005,"-",30215,"downstream"]
["chr6","LNC_004366","XLOC_043850","lncRNA",25145287,25148276,"-","Zm00001d035428_T005","Zm00001d035428",null,25148773,25158121,"-",496,"downstream"]
["chr2","LNC_001859","XLOC_018405","lncRNA",60736537,60749696,"-","Zm00001d003817_T003","Zm00001d003817","sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1//2.95855e-28",60752443,60763006,"+",2746,"upstream"]
["chr2","LNC_001854","XLOC_018397","lncRNA",60643795,60644250,"-","Zm00001d003814_T001","Zm00001d003814","sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4 OS=Arabidopsis thaliana GN=ATX4 PE=2 SV=3//4.62839e-20",60686039,60687331,"+",41788,"upstream"]
["chr2","LNC_001850","XLOC_018377","lncRNA",59571752,59572089,"-","Zm00001d003793_T001","Zm00001d003793",null,59492106,59493003,"+",78748,"downstream"]
["chr7","LNC_004776","XLOC_047779","lncRNA",140509145,140511296,"+","Zm00001d021012_T001","Zm00001d021012","sp|Q5Z5B2|AGO1D_ORYSJ Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1//2.67013e-23",140466478,140466869,"-",42275,"upstream"]
["chr7","LNC_004777","XLOC_047782","lncRNA",140841087,140841465,"+","Zm00001d021028_T012","Zm00001d021028",null,140896370,140901926,"-",54904,"downstream"]
["chr1","LNC_000099","XLOC_001367","lncRNA",73310195,73310412,"+","Zm00001d029499_T001","Zm00001d029499",null,73370780,73373210,"+",60367,"upstream"]
["chr8","LNC_005578","XLOC_055630","lncRNA",130480229,130488461,"-","Zm00001d010855_T007","Zm00001d010855","sp|A2Y0H2|Y5513_ORYSI REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=3 SV=1//1.20765e-102",130580011,130581978,"+",91549,"upstream"]
["chr2","LNC_002031","XLOC_019917","lncRNA",198857221,198860816,"-","Zm00001d006113_T003","Zm00001d006113","sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2//8.28394e-11",198798474,198822146,"+",35074,"downstream"]
["chr2","LNC_002030","XLOC_019917","lncRNA",198857221,198860816,"-","Zm00001d006113_T008","Zm00001d006113","sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2//8.28394e-11",198798653,198821619,"+",35601,"downstream"]
["chr2","LNC_002036","XLOC_019988","lncRNA",202381875,202382206,"-","Zm00001d006229_T001","Zm00001d006229","sp|Q6I628|PSS2_ORYSJ CDP-diacylglycerol--serine O-phosphatidyltransferase 2 OS=Oryza sativa subsp. japonica GN=PSS2 PE=2 SV=2//1.78371e-98",202371805,202372945,"+",8929,"downstream"]
["chr2","LNC_002039","XLOC_020035","lncRNA",204322544,204323346,"-","Zm00001d006317_T001","Zm00001d006317","sp|Q9ZVT8|RF4_ARATH Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana GN=RF4 PE=3 SV=1//2.6826e-28",204325597,204331251,"-",2250,"downstream"]
["chr4","LNC_003201","XLOC_031860","lncRNA",78544935,78545281,"-","Zm00001d050284_T009","Zm00001d050284","sp|B1XKC3|MNME_SYNP2 tRNA modification GTPase MnmE OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=mnmE PE=3 SV=1//2.25893e-94",78468492,78471687,"+",73247,"downstream"]
["chr4","LNC_003203","XLOC_031887","lncRNA",81419097,81419333,"-","Zm00001d050327_T001","Zm00001d050327",null,81506365,81509106,"+",87031,"upstream"]
["chr10","LNC_000891","XLOC_009235","lncRNA",4281703,4281997,"+","Zm00001d023376_T003","Zm00001d023376","sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1//2.81195e-17",4272350,4274614,"-",7088,"upstream"]
["chr10","LNC_000890","XLOC_009220","lncRNA",3886283,3886606,"+","Zm00001d023344_T002","Zm00001d023344","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//2.41655e-19",3842266,3853881,"-",32401,"upstream"]
["chr10","LNC_000892","XLOC_009240","lncRNA",4553108,4553511,"+","Zm00001d023392_T004","Zm00001d023392","sp|Q8GU83|AB41G_ORYSJ ABC transporter G family member 41 OS=Oryza sativa subsp. japonica GN=ABCG41 PE=3 SV=1//0",4495324,4499194,"-",53913,"upstream"]
["chr10","LNC_000899","XLOC_009281","lncRNA",6229615,6229859,"+","Zm00001d023459_T002","Zm00001d023459","sp|Q8GXE9|HA22J_ARATH HVA22-like protein j OS=Arabidopsis thaliana GN=HVA22J PE=2 SV=2//9.92752e-29",6289478,6298727,"+",59618,"upstream"]
["chr2","LNC_001423","XLOC_014320","lncRNA",36780167,36785198,"+","Zm00001d003222_T008","Zm00001d003222","sp|Q7XUF4|CDKG2_ORYSJ Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2//0",36694343,36699138,"+",81028,"downstream"]
["chr9","LNC_005918","XLOC_059149","lncRNA",1460776,1462551,"-","Zm00001d044759_T001","Zm00001d044759","sp|Q9LFR0|GMAN2_ARATH Alpha-mannosidase 2 OS=Arabidopsis thaliana GN=GMII PE=1 SV=1//0",1552223,1562434,"+",89671,"upstream"]
["chr9","LNC_005913","XLOC_059089","lncRNA",157935888,157936156,"+","Zm00001d048535_T015","Zm00001d048535",null,157960607,157968716,"-",24450,"downstream"]
["chr9","LNC_005912","XLOC_059030","lncRNA",155654631,155654878,"+","Zm00001d048400_T001","Zm00001d048400","sp|Q10RP4|SE14_ORYSJ Lysine-specific demethylase SE14 OS=Oryza sativa subsp. japonica GN=SE14 PE=3 SV=2//3.90902e-49",155602623,155605008,"-",49622,"upstream"]
["chr9","LNC_005911","XLOC_059013","lncRNA",155205712,155207219,"+","Zm00001d048382_T001","Zm00001d048382","sp|Q9FDZ9|RL212_ARATH 60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1//7.23937e-103",155283825,155285857,"+",76605,"upstream"]
["chr9","LNC_005917","XLOC_059125","lncRNA",159553403,159557560,"+","Zm00001d048575_T016","Zm00001d048575",null,159481011,159515415,"-",37987,"upstream"]
["chr9","LNC_005916","XLOC_059098","lncRNA",158323174,158323398,"+","Zm00001d048546_T075","Zm00001d048546","sp|A0JP85|CNOT1_XENTR CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=1//7.41629e-34",158405235,158460245,"-",81836,"downstream"]
["chr9","LNC_005915","XLOC_059097","lncRNA",158279552,158280064,"+","Zm00001d048541_T012","Zm00001d048541","sp|H3K2Y6|MED12_ARATH Mediator of RNA polymerase II transcription subunit 12 OS=Arabidopsis thaliana GN=MED12 PE=1 SV=1//0",158174024,158185935,"+",93616,"downstream"]
["chr9","LNC_005915","XLOC_059097","lncRNA",158279552,158280064,"+","Zm00001d048544_T001","Zm00001d048544","sp|Q940Y1|ORP2A_ARATH Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1//2.16247e-19",158364788,158370927,"+",84723,"upstream"]
["chr9","LNC_005914","XLOC_059090","lncRNA",158010266,158010732,"+","Zm00001d048535_T017","Zm00001d048535",null,157960654,157968545,"-",41720,"upstream"]
["chr10","LNC_001078","XLOC_010700","lncRNA",127831505,127831932,"+","Zm00001d025734_T004","Zm00001d025734","sp|Q6WQJ1|DGLA_MOUSE Sn1-specific diacylglycerol lipase alpha OS=Mus musculus GN=Dagla PE=1 SV=2//7.42913e-11",127905471,127906142,"+",73538,"upstream"]
["chr10","LNC_001070","XLOC_010679","lncRNA",126780577,126785677,"+","Zm00001d025706_T012","Zm00001d025706","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//7.71005e-07",126885073,126888800,"-",99395,"downstream"]
["chr10","LNC_001072","XLOC_010679","lncRNA",126780609,126785677,"+","Zm00001d025706_T003","Zm00001d025706","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//7.71005e-07",126880549,126888834,"-",94871,"downstream"]
["chr10","LNC_001072","XLOC_010679","lncRNA",126780609,126785677,"+","Zm00001d025705_T014","Zm00001d025705","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//6.82411e-33",126856884,126878792,"-",71206,"downstream"]
["chr10","LNC_001074","XLOC_010681","lncRNA",126796766,126797049,"+","Zm00001d025705_T017","Zm00001d025705","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//6.82411e-33",126857002,126868578,"-",59952,"downstream"]
["chr10","LNC_001075","XLOC_010696","lncRNA",127599658,127599929,"+","Zm00001d025725_T002","Zm00001d025725",null,127604074,127605016,"-",4144,"downstream"]
["chr10","LNC_001117","XLOC_011154","lncRNA",147912603,147912878,"+","Zm00001d026536_T002","Zm00001d026536","sp|Q7XM16|C3H30_ORYSJ Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN=Os04g0663200 PE=2 SV=3//9.38213e-154",147843947,147850295,"-",62307,"upstream"]
["chr10","LNC_001117","XLOC_011154","lncRNA",147912603,147912878,"+","Zm00001d026547_T002","Zm00001d026547","sp|Q5ZI57|TPPC3_CHICK Trafficking protein particle complex subunit 3 OS=Gallus gallus GN=TRAPPC3 PE=2 SV=1//2.37161e-66",147985169,147986283,"-",72290,"downstream"]
["chr10","LNC_001116","XLOC_011140","lncRNA",147310387,147310786,"+","Zm00001d026511_T133","Zm00001d026511","sp|Q9LJD8|M3KE1_ARATH MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana GN=M3KE1 PE=1 SV=1//0",147370722,147387611,"-",59935,"downstream"]
["chr10","LNC_001116","XLOC_011140","lncRNA",147310387,147310786,"+","Zm00001d026511_T002","Zm00001d026511","sp|Q9LJD8|M3KE1_ARATH MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana GN=M3KE1 PE=1 SV=1//0",147370578,147387611,"-",59791,"downstream"]
["chr10","LNC_001116","XLOC_011140","lncRNA",147310387,147310786,"+","Zm00001d026511_T152","Zm00001d026511","sp|Q9LJD8|M3KE1_ARATH MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana GN=M3KE1 PE=1 SV=1//0",147380436,147387609,"-",69649,"downstream"]
["chr10","LNC_001114","XLOC_011086","lncRNA",145409180,145409400,"+","Zm00001d026412_T001","Zm00001d026412",null,145387777,145388573,"+",20606,"downstream"]
["chr10","LNC_001114","XLOC_011086","lncRNA",145409180,145409400,"+","Zm00001d026402_T002","Zm00001d026402","sp|Q6Z4T5|POLIA_ORYSJ DNA polymerase I A, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0175300 PE=2 SV=1//0",145302797,145311603,"+",97576,"downstream"]
["chr10","LNC_001110","XLOC_011066","lncRNA",144962435,144970151,"+","Zm00001d026387_T002","Zm00001d026387",null,144881982,144883102,"+",79332,"downstream"]
["chr10","LNC_001119","XLOC_011168","lncRNA",148179405,148182517,"+","Zm00001d026565_T001","Zm00001d026565",null,148160167,148160239,"-",19165,"upstream"]
["chr10","LNC_001118","XLOC_011168","lncRNA",148179405,148182517,"+","Zm00001d026577_T001","Zm00001d026577","sp|P25777|ORYB_ORYSJ Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2//0",148261491,148265297,"-",78973,"downstream"]
["chr1","LNC_000300","XLOC_003115","lncRNA",222972062,222972860,"+","Zm00001d032336_T003","Zm00001d032336","sp|Q4KLU2|PRP39_XENLA Pre-mRNA-processing factor 39 OS=Xenopus laevis GN=prpf39 PE=2 SV=1//3.1829e-24",222976163,223002067,"+",3302,"upstream"]
["chr1","LNC_000305","XLOC_003181","lncRNA",226817071,226817475,"+","Zm00001d032449_T004","Zm00001d032449","sp|Q9LRB0|LCBK1_ARATH Sphingoid long-chain bases kinase 1 OS=Arabidopsis thaliana GN=LCBK1 PE=1 SV=1//8.09429e-06",226866874,226875314,"-",49398,"downstream"]
["chr4","LNC_002794","XLOC_027830","lncRNA",16132737,16133140,"+","Zm00001d049106_T004","Zm00001d049106","sp|Q8VZA0|SIEL_ARATH Protein SIEL OS=Arabidopsis thaliana GN=SIEL PE=1 SV=1//1.07614e-07",16167711,16169791,"+",34570,"upstream"]
["chr4","LNC_002797","XLOC_027839","lncRNA",16723130,16723682,"+","Zm00001d049125_T003","Zm00001d049125","sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1//7.93128e-132",16816622,16824693,"+",92939,"upstream"]
["chr4","LNC_002792","XLOC_027786","lncRNA",12995402,12995915,"+","Zm00001d049023_T013","Zm00001d049023",null,12939971,12946416,"+",48985,"downstream"]
["chr4","LNC_002793","XLOC_027803","lncRNA",14509814,14510331,"+","Zm00001d049064_T001","Zm00001d049064",null,14566175,14568251,"+",55843,"upstream"]
["chr8","LNC_005360","XLOC_054032","lncRNA",555179,555706,"-","Zm00001d008178_T018","Zm00001d008178","sp|Q9M1Q9|AB21B_ARATH ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=2//4.39464e-129",558998,565138,"+",3291,"upstream"]
["chr8","LNC_005361","XLOC_054069","lncRNA",2642941,2643287,"-","Zm00001d008248_T001","Zm00001d008248",null,2562419,2568575,"+",74365,"downstream"]
["chr4","LNC_002862","XLOC_028530","lncRNA",71250565,71251236,"+","Zm00001d050180_T001","Zm00001d050180",null,71186718,71187311,"+",63253,"downstream"]
["chr8","LNC_005448","XLOC_054749","lncRNA",56638776,56639122,"-","Zm00001d009335_T001","Zm00001d009335",null,56713304,56714783,"+",74181,"upstream"]
["chr6","LNC_004091","XLOC_041425","lncRNA",41953847,41954821,"+","Zm00001d035706_T001","Zm00001d035706","sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1 OS=Danio rerio GN=pif1 PE=2 SV=1//2.74345e-20",41922351,41927561,"-",26285,"upstream"]
["chr6","LNC_004098","XLOC_041458","lncRNA",45737903,45738338,"+","Zm00001d035757_T009","Zm00001d035757","sp|Q0DLG0|FH14_ORYSJ Formin-like protein 14 OS=Oryza sativa subsp. japonica GN=FH14 PE=2 SV=1//0",45722640,45725620,"-",12282,"upstream"]
["chr10","LNC_000933","XLOC_009503","lncRNA",25270321,25272955,"+","Zm00001d023858_T004","Zm00001d023858","sp|Q9LJ64|PLRX1_ARATH Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=1//2.10492e-140",25245470,25248732,"-",21588,"upstream"]
["chr10","LNC_000933","XLOC_009503","lncRNA",25270321,25272955,"+","Zm00001d023858_T037","Zm00001d023858","sp|Q9LJ64|PLRX1_ARATH Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=1//2.10492e-140",25245546,25248732,"-",21588,"upstream"]
["chr10","LNC_000931","XLOC_009503","lncRNA",25270317,25272955,"+","Zm00001d023858_T048","Zm00001d023858","sp|Q9LJ64|PLRX1_ARATH Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=1//2.10492e-140",25245894,25248808,"-",21508,"upstream"]
["chr10","LNC_000934","XLOC_009503","lncRNA",25270495,25272955,"+","Zm00001d023858_T014","Zm00001d023858","sp|Q9LJ64|PLRX1_ARATH Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=1//2.10492e-140",25245530,25248734,"-",21760,"upstream"]
["chr6","LNC_004549","XLOC_045609","lncRNA",152921682,152921889,"-","Zm00001d038272_T005","Zm00001d038272","sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153) GN=BACOVA_02659 PE=1 SV=1//2.81128e-73",152937135,152940220,"-",15245,"downstream"]
["chr6","LNC_004546","XLOC_045520","lncRNA",149317301,149317509,"-","Zm00001d038149_T003","Zm00001d038149",null,149411278,149417606,"-",93768,"downstream"]
["chr6","LNC_004546","XLOC_045520","lncRNA",149317301,149317509,"-","Zm00001d038142_T023","Zm00001d038142","sp|O82782|HIS3_ARATH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Arabidopsis thaliana GN=HISN3 PE=2 SV=1//8.16235e-07",149249536,149257788,"+",59512,"downstream"]
["chr6","LNC_004541","XLOC_045384","lncRNA",142514206,142514862,"-","Zm00001d037934_T001","Zm00001d037934","sp|Q8S8T4|UXS4_ARATH UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana GN=UXS4 PE=2 SV=1//1.18446e-22",142590235,142594534,"+",75372,"upstream"]
["chr6","LNC_004541","XLOC_045384","lncRNA",142514206,142514862,"-","Zm00001d037932_T020","Zm00001d037932","sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus GN=CERBERUS PE=2 SV=2//1.37217e-33",142514987,142521117,"+",124,"upstream"]
["chr2","LNC_001686","XLOC_016368","lncRNA",208265350,208265917,"+","Zm00001d006438_T025","Zm00001d006438","sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2//2.31592e-35",208170882,208186736,"+",78613,"downstream"]
["chr2","LNC_001686","XLOC_016368","lncRNA",208265350,208265917,"+","Zm00001d006438_T036","Zm00001d006438","sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2//2.31592e-35",208170894,208196256,"+",69093,"downstream"]
["chr2","LNC_001685","XLOC_016363","lncRNA",207825961,207827650,"+","Zm00001d006428_T002","Zm00001d006428","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.80776e-25",207695637,207743821,"+",82139,"downstream"]
["chr2","LNC_001681","XLOC_016321","lncRNA",205498142,205501935,"+","Zm00001d006355_T021","Zm00001d006355","sp|Q45FA5|SRPK_PHYPO Serine/threonine-protein kinase SRPK OS=Physarum polycephalum PE=1 SV=1//1.91334e-102",205467489,205471796,"-",26345,"upstream"]
["chr2","LNC_001689","XLOC_016386","lncRNA",209548366,209548618,"+","Zm00001d006480_T004","Zm00001d006480","sp|Q84TH4|SR45A_ARATH Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana GN=SR45A PE=1 SV=1//1.85026e-14",209642696,209648667,"-",94077,"downstream"]
["chr2","LNC_001688","XLOC_016375","lncRNA",208846230,208846546,"+","Zm00001d006456_T001","Zm00001d006456","sp|F4I2H7|TPX2_ARATH Protein TPX2 OS=Arabidopsis thaliana GN=TPX2 PE=1 SV=1//2.35325e-128",208770104,208775583,"-",70646,"upstream"]
["chrB73V4_ctg53","LNC_006248","XLOC_062000","lncRNA",302179,303119,"+","Zm00001d000162_T001","Zm00001d000162","sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 SV=1//7.9524e-08",356335,358296,"-",53215,"downstream"]
["chr4","LNC_003018","XLOC_029901","lncRNA",189170908,189171867,"+","Zm00001d052399_T013","Zm00001d052399","sp|Q9SJD4|LACS8_ARATH Long chain acyl-CoA synthetase 8 OS=Arabidopsis thaliana GN=LACS8 PE=1 SV=1//0",189148344,189154702,"+",16205,"downstream"]
["chr4","LNC_003018","XLOC_029901","lncRNA",189170908,189171867,"+","Zm00001d052406_T001","Zm00001d052406",null,189198091,189198163,"-",26223,"downstream"]
["chr4","LNC_003015","XLOC_029888","lncRNA",188393187,188393553,"+","Zm00001d052361_T001","Zm00001d052361","sp|Q9FHK4|Y5519_ARATH Uncharacterized protein At5g05190 OS=Arabidopsis thaliana GN=Y-1 PE=1 SV=1//2.9529e-07",188290914,188296399,"-",96787,"upstream"]
["chr4","LNC_003016","XLOC_029896","lncRNA",188957315,188968345,"+","Zm00001d052392_T001","Zm00001d052392","sp|O00463|TRAF5_HUMAN TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2//1.07256e-08",188988474,188990386,"-",20128,"downstream"]
["chr4","LNC_003011","XLOC_029798","lncRNA",184180263,184180607,"+","Zm00001d052233_T003","Zm00001d052233","sp|Q6MEW4|GPMA_PARUW 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Protochlamydia amoebophila (strain UWE25) GN=gpmA PE=3 SV=1//1.33203e-12",184160291,184163135,"-",17127,"upstream"]
["chr4","LNC_003012","XLOC_029817","lncRNA",185201504,185201809,"+","Zm00001d052264_T005","Zm00001d052264","sp|Q6ZGU9|EXPA5_ORYSJ Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1//1.71914e-130",185237832,185239505,"-",36022,"downstream"]
["chr3","LNC_002658","XLOC_026203","lncRNA",161477776,161477995,"-","Zm00001d042328_T001","Zm00001d042328","sp|Q9FYF9|FB76_ARATH F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1//3.23532e-64",161430816,161432463,"+",45312,"downstream"]
["chr3","LNC_002656","XLOC_026191","lncRNA",160648558,160648948,"-","Zm00001d042314_T002","Zm00001d042314","sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana GN=CBSCBSPB5 PE=1 SV=1//2.15806e-10",160558687,160562898,"-",85659,"upstream"]
["chr3","LNC_002651","XLOC_026163","lncRNA",158629874,158630245,"-","Zm00001d042276_T001","Zm00001d042276","sp|Q8S1X7|GT15_ORYSJ Probable glucuronosyltransferase Os01g0926700 OS=Oryza sativa subsp. japonica GN=Os01g0926700 PE=3 SV=1//0",158610655,158612902,"+",16971,"downstream"]
["chr7","LNC_004841","XLOC_048462","lncRNA",173548174,173548481,"+","Zm00001d022244_T001","Zm00001d022244",null,173497178,173501734,"-",46439,"upstream"]
["chr7","LNC_004846","XLOC_048547","lncRNA",176764513,176765049,"+","Zm00001d022401_T002","Zm00001d022401","sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2//4.55805e-157",176820395,176824124,"+",55345,"upstream"]
["chr7","LNC_004847","XLOC_048557","lncRNA",177584688,177586571,"+","Zm00001d022429_T014","Zm00001d022429","sp|Q9LUG9|MD33A_ARATH Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana GN=MED33A PE=1 SV=1//0",177477262,177488478,"-",96209,"upstream"]
["chr7","LNC_004845","XLOC_048546","lncRNA",176688596,176689737,"+","Zm00001d022396_T012","Zm00001d022396","sp|Q15021|CND1_HUMAN Condensin complex subunit 1 OS=Homo sapiens GN=NCAPD2 PE=1 SV=3//3.17911e-47",176688333,176694592,"-",-1142,"antisense"]
["chr6","LNC_004307","XLOC_043532","lncRNA",374109,378610,"-","Zm00001d034970_T006","Zm00001d034970","sp|Q5XIA1|NCLN_RAT Nicalin OS=Rattus norvegicus GN=Ncln PE=2 SV=1//3.66332e-70",389075,392916,"-",10464,"downstream"]
["chr6","LNC_004301","XLOC_043489","lncRNA",171157807,171158188,"+","Zm00001d039153_T001","Zm00001d039153",null,171108731,171109293,"-",48513,"upstream"]
["chr6","LNC_004300","XLOC_043486","lncRNA",171054203,171054528,"+","Zm00001d039146_T001","Zm00001d039146","sp|Q9M9Q6|SCP50_ARATH Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1//5.95051e-145",171035380,171036741,"+",17461,"downstream"]
["chr6","LNC_004303","XLOC_043493","lncRNA",171457252,171457573,"+","Zm00001d039160_T020","Zm00001d039160","sp|B5BT18|BTAF1_ARATH TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana GN=BTAF1 PE=1 SV=1//2.46789e-27",171405209,171429963,"-",27288,"upstream"]
["chr6","LNC_004303","XLOC_043493","lncRNA",171457252,171457573,"+","Zm00001d039160_T030","Zm00001d039160","sp|B5BT18|BTAF1_ARATH TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana GN=BTAF1 PE=1 SV=1//2.46789e-27",171405211,171429283,"-",27968,"upstream"]
["chr6","LNC_004309","XLOC_043532","lncRNA",374109,379304,"-","Zm00001d034970_T006","Zm00001d034970","sp|Q5XIA1|NCLN_RAT Nicalin OS=Rattus norvegicus GN=Ncln PE=2 SV=1//3.66332e-70",389075,392916,"-",9770,"downstream"]
["chr2","LNC_001870","XLOC_018477","lncRNA",68487447,68505619,"-","Zm00001d003923_T005","Zm00001d003923","sp|Q9FLQ4|ODO2A_ARATH Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial OS=Arabidopsis thaliana GN=At5g55070 PE=2 SV=1//0",68465704,68477339,"-",10107,"upstream"]
["chr10","LNC_001308","XLOC_012984","lncRNA",134982553,134983337,"-","Zm00001d025962_T001","Zm00001d025962","sp|C5WPC2|ARGJ_SORBI Arginine biosynthesis bifunctional protein ArgJ, chloroplastic OS=Sorghum bicolor GN=Sb01g039230 PE=3 SV=1//1.53756e-06",134948589,134952020,"+",30532,"downstream"]
["chr10","LNC_001309","XLOC_013003","lncRNA",135631335,135631601,"-","Zm00001d025991_T009","Zm00001d025991","sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1//7.88211e-18",135569001,135572398,"-",58936,"upstream"]
["chr5","LNC_003652","XLOC_036699","lncRNA",179735521,179736362,"+","Zm00001d016906_T001","Zm00001d016906","sp|P85076|PME_ACTDE Pectinesterase OS=Actinidia deliciosa PE=1 SV=1//1.87803e-34",179662037,179665352,"+",70168,"downstream"]
["chr5","LNC_003651","XLOC_036682","lncRNA",179340604,179340809,"+","Zm00001d016889_T001","Zm00001d016889",null,179433468,179436488,"-",92658,"downstream"]
["chr5","LNC_003655","XLOC_036791","lncRNA",184571925,184572372,"+","Zm00001d017078_T001","Zm00001d017078","sp|F4I443|BARD1_ARATH BRCA1-associated RING domain protein 1 OS=Arabidopsis thaliana GN=BARD1 PE=1 SV=1//3.74778e-19",184648994,184656199,"+",76621,"upstream"]
["chr8","LNC_005551","XLOC_055459","lncRNA",121060616,121060840,"-","Zm00001d010587_T001","Zm00001d010587","sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1//2.63175e-13",121036274,121036795,"+",23820,"downstream"]
["chr8","LNC_005555","XLOC_055489","lncRNA",122813484,122814974,"-","Zm00001d010639_T003","Zm00001d010639","sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=2 SV=1//4.41325e-76",122780823,122786723,"+",26760,"downstream"]
["chr2","LNC_002013","XLOC_019720","lncRNA",189000410,189000681,"-","Zm00001d005794_T019","Zm00001d005794","sp|Q6NQ79|ARID4_ARATH AT-rich interactive domain-containing protein 4 OS=Arabidopsis thaliana GN=ARID4 PE=2 SV=1//5.33262e-16",188896389,188907605,"-",92804,"upstream"]
["chr2","LNC_002012","XLOC_019715","lncRNA",188834123,188834919,"-","Zm00001d005792_T002","Zm00001d005792","sp|Q9SMY6|PME45_ARATH Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1//1.03616e-152",188842876,188845465,"-",7956,"downstream"]
["chr2","LNC_002015","XLOC_019737","lncRNA",190043974,190044261,"-","Zm00001d005828_T003","Zm00001d005828","sp|Q10717|CYSP2_MAIZE Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1//1.81534e-50",190018443,190023273,"-",20700,"upstream"]
["chr4","LNC_003220","XLOC_031982","lncRNA",89964906,89965182,"-","Zm00001d050460_T001","Zm00001d050460","sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1//9.38569e-10",90012034,90013460,"+",46851,"upstream"]
["chr1","LNC_000225","XLOC_002271","lncRNA",169188843,169192259,"+","Zm00001d030960_T008","Zm00001d030960","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//2.18662e-12",169229601,169239762,"+",37341,"upstream"]
["chr8","LNC_005303","XLOC_053182","lncRNA",144811701,144812145,"+","Zm00001d011258_T011","Zm00001d011258","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//7.36684e-07",144732351,144736962,"+",74738,"downstream"]
["chr10","LNC_001312","XLOC_013017","lncRNA",136174598,136174867,"-","Zm00001d026018_T005","Zm00001d026018","sp|Q38871|CDPK5_ARATH Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=2 SV=1//0",136175735,136179753,"+",867,"upstream"]
["chr10","LNC_001312","XLOC_013017","lncRNA",136174598,136174867,"-","Zm00001d026020_T001","Zm00001d026020",null,136228251,136231070,"-",53383,"downstream"]
["chr10","LNC_001316","XLOC_013058","lncRNA",138073436,138073650,"-","Zm00001d026086_T002","Zm00001d026086","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//3.07345e-71",138088865,138090175,"-",15214,"downstream"]
["chr9","LNC_005971","XLOC_059663","lncRNA",28487106,28487970,"-","Zm00001d045603_T007","Zm00001d045603","sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 PE=1 SV=1//3.47943e-107",28436212,28457243,"+",29862,"downstream"]
["chr9","LNC_005970","XLOC_059660","lncRNA",28482710,28483166,"-","Zm00001d045604_T003","Zm00001d045604","sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EDD1 PE=1 SV=1//9.25327e-07",28457184,28460983,"-",21726,"upstream"]
["chr9","LNC_005970","XLOC_059660","lncRNA",28482710,28483166,"-","Zm00001d045604_T004","Zm00001d045604","sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EDD1 PE=1 SV=1//9.25327e-07",28457201,28460863,"-",21846,"upstream"]
["chr10","LNC_001096","XLOC_010912","lncRNA",139028475,139028709,"+","Zm00001d026124_T001","Zm00001d026124","sp|P54797|TNG2_MOUSE Transport and Golgi organization 2 homolog OS=Mus musculus GN=Tango2 PE=2 SV=1//8.15966e-34",138973767,138976226,"-",52248,"upstream"]
["chr10","LNC_001095","XLOC_010901","lncRNA",138307180,138307628,"+","Zm00001d026097_T006","Zm00001d026097","sp|Q9XIN0|LHW_ARATH Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1//3.45611e-06",138393464,138395597,"-",85835,"downstream"]
["chr10","LNC_001098","XLOC_010998","lncRNA",142916077,142916334,"+","Zm00001d026289_T004","Zm00001d026289","sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3//4.04459e-40",142956463,142961794,"-",40128,"downstream"]
["chr5","LNC_003820","XLOC_038935","lncRNA",74023356,74023585,"-","Zm00001d015065_T015","Zm00001d015065","sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana GN=RS31 PE=1 SV=2//2.60017e-06",73934097,73937679,"-",85676,"upstream"]
["chr5","LNC_003822","XLOC_038943","lncRNA",74764502,74764931,"-","Zm00001d015082_T013","Zm00001d015082","sp|Q8N3P4|VPS8_HUMAN Vacuolar protein sorting-associated protein 8 homolog OS=Homo sapiens GN=VPS8 PE=1 SV=3//2.23898e-58",74805491,74823192,"+",40559,"upstream"]
["chr5","LNC_003827","XLOC_038996","lncRNA",78381934,78382365,"-","Zm00001d015172_T001","Zm00001d015172","sp|Q8PSE5|HTPX2_METMA Protease HtpX homolog 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=htpX2 PE=3 SV=1//1.27839e-08",78379823,78380481,"-",1452,"upstream"]
["chr5","LNC_003828","XLOC_039022","lncRNA",80089391,80089802,"-","Zm00001d015228_T003","Zm00001d015228","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//1.11887e-13",80075268,80077267,"-",12123,"upstream"]
["chr1","LNC_000323","XLOC_003379","lncRNA",238968225,238968492,"+","Zm00001d032810_T013","Zm00001d032810","sp|Q9CR50|ZN363_MOUSE RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1//8.09144e-35",238937637,238939855,"+",28369,"downstream"]
["chr1","LNC_000327","XLOC_003402","lncRNA",239970778,239971111,"+","Zm00001d032843_T003","Zm00001d032843","sp|A3ANB5|ARP7_ORYSJ Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2//4.80744e-83",239903140,239906766,"+",64011,"downstream"]
["chr1","LNC_000324","XLOC_003383","lncRNA",239177716,239178763,"+","Zm00001d032815_T016","Zm00001d032815","sp|P38094|FLUG_EMENI Protein fluG OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fluG PE=1 SV=1//1.22096e-11",239121655,239143369,"-",34346,"upstream"]
["chr5","LNC_003791","XLOC_038503","lncRNA",43031673,43035226,"-","Zm00001d014364_T008","Zm00001d014364","sp|A2WW87|GAM1_ORYSI Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1//6.11682e-49",42931981,42933932,"+",97740,"downstream"]
["chr5","LNC_003797","XLOC_038546","lncRNA",47302802,47303006,"-","Zm00001d014443_T005","Zm00001d014443","sp|Q9CAU0|SCP6_ARATH Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=2//6.8373e-118",47269987,47273503,"-",29298,"upstream"]
["chr8","LNC_005307","XLOC_053205","lncRNA",146168258,146168492,"+","Zm00001d011301_T001","Zm00001d011301","sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1//0",146174056,146176755,"+",5563,"upstream"]
["chr1","LNC_000224","XLOC_002271","lncRNA",169188843,169192259,"+","Zm00001d030960_T016","Zm00001d030960","sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1//2.18662e-12",169230565,169239672,"+",38305,"upstream"]
["chr4","LNC_002841","XLOC_028313","lncRNA",50713115,50713430,"+","Zm00001d049888_T001","Zm00001d049888","sp|F4KFT7|TENAC_ARATH Probable aminopyrimidine aminohydrolase, mitochondrial OS=Arabidopsis thaliana GN=TNEA_C PE=2 SV=1//0",50687439,50690448,"-",22666,"upstream"]
["chr9","LNC_006016","XLOC_059962","lncRNA",60688855,60693369,"-","Zm00001d046065_T001","Zm00001d046065","sp|Q8LPU4|HAT1_MAIZE Histone acetyltransferase type B catalytic subunit OS=Zea mays GN=HAT1 PE=1 SV=2//7.40917e-28",60763922,60768842,"+",70552,"upstream"]
["chr1","LNC_000554","XLOC_006118","lncRNA",88431842,88432084,"-","Zm00001d029818_T020","Zm00001d029818","sp|Q96JG6|SYNDE_HUMAN Syndetin OS=Homo sapiens GN=CCDC132 PE=1 SV=3//4.40953e-61",88442684,88462890,"+",10599,"upstream"]
["chr7","LNC_005075","XLOC_050977","lncRNA",176514189,176515450,"-","Zm00001d022381_T011","Zm00001d022381","sp|Q70G58|NTRC_ORYSJ Thioredoxin reductase NTRC OS=Oryza sativa subsp. japonica GN=Os07g0657900 PE=1 SV=2//6.94318e-93",176462566,176485399,"+",28789,"downstream"]
["chr7","LNC_005075","XLOC_050977","lncRNA",176514189,176515450,"-","Zm00001d022388_T005","Zm00001d022388","sp|P23225|GLTB_MAIZE Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1//2.22116e-08",176589186,176606869,"-",73735,"downstream"]
["chr7","LNC_005075","XLOC_050977","lncRNA",176514189,176515450,"-","Zm00001d022378_T035","Zm00001d022378","sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B OS=Arabidopsis thaliana GN=SEC31B PE=1 SV=1//1.74813e-38",176432963,176443949,"+",70239,"downstream"]
["chr7","LNC_005075","XLOC_050977","lncRNA",176514189,176515450,"-","Zm00001d022387_T011","Zm00001d022387","sp|Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7 OS=Arabidopsis thaliana GN=ROPGAP7 PE=2 SV=1//0",176575878,176586726,"+",60427,"upstream"]
["chr7","LNC_005077","XLOC_050990","lncRNA",176822834,176823575,"-","Zm00001d022405_T057","Zm00001d022405","sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana GN=CHR5 PE=3 SV=1//2.43654e-89",176869012,176882837,"-",45436,"downstream"]
["chr7","LNC_005077","XLOC_050990","lncRNA",176822834,176823575,"-","Zm00001d022405_T042","Zm00001d022405","sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana GN=CHR5 PE=3 SV=1//2.43654e-89",176865489,176880640,"-",41913,"downstream"]
["chr9","LNC_005897","XLOC_058840","lncRNA",148077745,148078215,"+","Zm00001d048014_T001","Zm00001d048014","sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1//3.23488e-68",148007689,148008772,"-",68972,"upstream"]
["chr9","LNC_005894","XLOC_058817","lncRNA",147083274,147083532,"+","Zm00001d047983_T003","Zm00001d047983","sp|Q54X16|GID8_DICDI Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum GN=DDB_G0279265 PE=3 SV=2//3.5659e-92",147127843,147139955,"-",44310,"downstream"]
["chr9","LNC_005893","XLOC_058815","lncRNA",146917130,146917338,"+","Zm00001d047979_T001","Zm00001d047979","sp|B3DNN5|CDC16_ARATH Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana GN=APC6 PE=2 SV=1//2.04694e-09",146948067,146950987,"-",30728,"downstream"]
["chr9","LNC_005891","XLOC_058794","lncRNA",145867885,145868127,"+","Zm00001d047945_T002","Zm00001d047945","sp|Q9C5J9|Y5483_ARATH Uncharacterized GTP-binding protein At5g64813 OS=Arabidopsis thaliana GN=At5g64813 PE=1 SV=1//2.72089e-108",145929375,145933615,"-",61247,"downstream"]
["chr7","LNC_005073","XLOC_050975","lncRNA",176507794,176508222,"-","Zm00001d022381_T004","Zm00001d022381","sp|Q70G58|NTRC_ORYSJ Thioredoxin reductase NTRC OS=Oryza sativa subsp. japonica GN=Os07g0657900 PE=1 SV=2//6.94318e-93",176461808,176463633,"+",44160,"downstream"]
["chr7","LNC_005073","XLOC_050975","lncRNA",176507794,176508222,"-","Zm00001d022387_T033","Zm00001d022387","sp|Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7 OS=Arabidopsis thaliana GN=ROPGAP7 PE=2 SV=1//0",176577443,176586773,"+",69220,"upstream"]
["chr7","LNC_005073","XLOC_050975","lncRNA",176507794,176508222,"-","Zm00001d022378_T093","Zm00001d022378","sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B OS=Arabidopsis thaliana GN=SEC31B PE=1 SV=1//1.74813e-38",176433047,176443961,"+",63832,"downstream"]
["chr9","LNC_005898","XLOC_058855","lncRNA",148790940,148791332,"+","Zm00001d048047_T003","Zm00001d048047","sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155 OS=Arabidopsis thaliana GN=NUP155 PE=1 SV=1//1.38996e-41",148736782,148744917,"-",46022,"upstream"]
["chr9","LNC_005898","XLOC_058855","lncRNA",148790940,148791332,"+","Zm00001d048049_T024","Zm00001d048049","sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog OS=Arabidopsis thaliana GN=VAC14 PE=1 SV=2//3.0846e-19",148853909,148864790,"+",62576,"upstream"]
["chr9","LNC_005898","XLOC_058855","lncRNA",148790940,148791332,"+","Zm00001d048049_T072","Zm00001d048049","sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog OS=Arabidopsis thaliana GN=VAC14 PE=1 SV=2//3.0846e-19",148854636,148864744,"+",63303,"upstream"]
["chr3","LNC_002202","XLOC_021932","lncRNA",73191075,73192277,"+","Zm00001d040864_T014","Zm00001d040864","sp|F4IN58|PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog OS=Arabidopsis thaliana GN=At2g48040/At2g48050/At2g48060 PE=2 SV=1//0",73263381,73264182,"-",71103,"downstream"]
["chr4","LNC_003077","XLOC_030613","lncRNA",239077489,239078067,"+","Zm00001d053688_T001","Zm00001d053688","sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1//0",239044809,239053412,"+",24076,"downstream"]
["chr4","LNC_003075","XLOC_030587","lncRNA",238152405,238153188,"+","Zm00001d053650_T001","Zm00001d053650","sp|Q9LUP7|FB154_ARATH Putative F-box protein At3g17500 OS=Arabidopsis thaliana GN=At3g17500 PE=3 SV=1//7.43137e-10",238222901,238224184,"-",69712,"downstream"]
["chr4","LNC_003072","XLOC_030563","lncRNA",236298990,236299199,"+","Zm00001d053609_T043","Zm00001d053609","sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta&apos;-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1//3.44292e-10",236276879,236286878,"+",12111,"downstream"]
["chr4","LNC_003073","XLOC_030564","lncRNA",236476562,236478598,"+","Zm00001d053611_T001","Zm00001d053611","sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3//6.23316e-21",236401648,236414481,"-",62080,"upstream"]
["chr4","LNC_003070","XLOC_030559","lncRNA",236210376,236210938,"+","Zm00001d053604_T001","Zm00001d053604","sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3//9.84907e-09",236138479,236139918,"+",70457,"downstream"]
["chr4","LNC_003070","XLOC_030559","lncRNA",236210376,236210938,"+","Zm00001d053606_T001","Zm00001d053606","sp|Q9LF41|UBE4_ARATH Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana GN=PUB1 PE=2 SV=1//1.86754e-100",236202239,236203961,"+",6414,"downstream"]
["chr4","LNC_003071","XLOC_030560","lncRNA",236217726,236218326,"+","Zm00001d053610_T001","Zm00001d053610","sp|Q8RXE7|AGD14_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2//5.76734e-53",236302759,236309399,"-",84432,"downstream"]
["chr4","LNC_003078","XLOC_030613","lncRNA",239077489,239078215,"+","Zm00001d053685_T009","Zm00001d053685","sp|P20115|CISY4_ARATH Citrate synthase 4, mitochondrial OS=Arabidopsis thaliana GN=CSY4 PE=1 SV=3//4.45071e-08",239005698,239012510,"+",64978,"downstream"]
["chr8","LNC_005098","XLOC_051142","lncRNA",985862,986134,"+","Zm00001d008195_T001","Zm00001d008195",null,889078,889854,"-",96007,"upstream"]
["chr8","LNC_005096","XLOC_051131","lncRNA",626835,627196,"+","Zm00001d008179_T006","Zm00001d008179",null,565365,569466,"-",57368,"upstream"]
["chr8","LNC_005097","XLOC_051138","lncRNA",870001,870464,"+","Zm00001d008193_T002","Zm00001d008193",null,824494,829600,"-",40400,"upstream"]
["chr7","LNC_005090","XLOC_051099","lncRNA",181066631,181072300,"-","Zm00001d022615_T002","Zm00001d022615","sp|Q94CH6|EXL3_ARATH GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1//7.65672e-103",181113483,181115448,"+",41182,"upstream"]
["chr3","LNC_002677","XLOC_026395","lncRNA",176248683,176248883,"-","Zm00001d042670_T023","Zm00001d042670","sp|Q3B7T1|EDRF1_HUMAN Erythroid differentiation-related factor 1 OS=Homo sapiens GN=EDRF1 PE=1 SV=1//6.46021e-36",176198953,176205599,"+",43083,"downstream"]
["chr3","LNC_002673","XLOC_026372","lncRNA",174796745,174797034,"-","Zm00001d042636_T001","Zm00001d042636","sp|O80592|AAP8_ARATH Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1//2.03132e-159",174783851,174785778,"+",10966,"downstream"]
["chr3","LNC_002679","XLOC_026417","lncRNA",178004072,178004366,"-","Zm00001d042713_T004","Zm00001d042713","sp|O48653|DPOLA_ORYSJ DNA polymerase alpha catalytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0868300 PE=2 SV=2//5.25857e-58",178055865,178071841,"+",51498,"upstream"]
["chr7","LNC_004859","XLOC_048774","lncRNA",3923682,3923933,"-","Zm00001d018742_T001","Zm00001d018742","sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1//5.43849e-35",3845026,3851209,"+",72472,"downstream"]
["chr6","LNC_004327","XLOC_043638","lncRNA",7014029,7014276,"-","Zm00001d035150_T001","Zm00001d035150",null,7051761,7051964,"+",37484,"upstream"]
["chr6","LNC_004322","XLOC_043601","lncRNA",4673839,4674124,"-","Zm00001d035089_T003","Zm00001d035089","sp|Q555C6|VP13B_DICDI Putative vacuolar protein sorting-associated protein 13B OS=Dictyostelium discoideum GN=vps13B PE=3 SV=1//1.01812e-33",4680671,4738066,"-",6546,"downstream"]
["chr7","LNC_004856","XLOC_048736","lncRNA",2053429,2054783,"-","Zm00001d018657_T012","Zm00001d018657","sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL PE=1 SV=2//1.7037e-32",2056299,2074617,"-",1515,"downstream"]
["chr7","LNC_004856","XLOC_048736","lncRNA",2053429,2054783,"-","Zm00001d018656_T001","Zm00001d018656","sp|Q9C983|WRK57_ARATH Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1//1.63615e-47",2050308,2051829,"+",1599,"downstream"]
["chr10","LNC_001324","XLOC_013110","lncRNA",140321351,140321695,"-","Zm00001d026176_T003","Zm00001d026176","sp|Q9UKL6|PPCT_HUMAN Phosphatidylcholine transfer protein OS=Homo sapiens GN=PCTP PE=1 SV=1//8.07869e-07",140370348,140375825,"+",48652,"upstream"]
["chr10","LNC_001327","XLOC_013137","lncRNA",141573334,141574045,"-","Zm00001d026236_T001","Zm00001d026236",null,141665493,141667275,"+",91447,"upstream"]
["chr10","LNC_001320","XLOC_013078","lncRNA",138772710,138773617,"-","Zm00001d026118_T051","Zm00001d026118","sp|Q84WG1|NHX3_ARATH Sodium/hydrogen exchanger 3 OS=Arabidopsis thaliana GN=NHX3 PE=2 SV=2//1.16678e-16",138832908,138861117,"-",59290,"downstream"]
["chr10","LNC_001320","XLOC_013078","lncRNA",138772710,138773617,"-","Zm00001d026118_T039","Zm00001d026118","sp|Q84WG1|NHX3_ARATH Sodium/hydrogen exchanger 3 OS=Arabidopsis thaliana GN=NHX3 PE=2 SV=2//1.16678e-16",138832784,138856642,"-",59166,"downstream"]
["chr10","LNC_001320","XLOC_013078","lncRNA",138772710,138773617,"-","Zm00001d026118_T018","Zm00001d026118","sp|Q84WG1|NHX3_ARATH Sodium/hydrogen exchanger 3 OS=Arabidopsis thaliana GN=NHX3 PE=2 SV=2//1.16678e-16",138832710,138861277,"-",59092,"downstream"]
["chr10","LNC_001322","XLOC_013091","lncRNA",139415815,139416144,"-","Zm00001d026132_T001","Zm00001d026132","sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1//1.32526e-170",139324321,139327689,"+",88125,"downstream"]
["chr10","LNC_001328","XLOC_013149","lncRNA",142013453,142013775,"-","Zm00001d026253_T008","Zm00001d026253","sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1//7.07218e-168",142057845,142067549,"-",44069,"downstream"]
["chr5","LNC_003678","XLOC_037057","lncRNA",199427782,199428069,"+","Zm00001d017555_T007","Zm00001d017555",null,199470151,199471727,"+",42081,"upstream"]
["chr5","LNC_003674","XLOC_036930","lncRNA",193424452,193428200,"+","Zm00001d017352_T007","Zm00001d017352","sp|Q6H849|NRL4_ORYSJ Bifunctional nitrilase/nitrile hydratase NIT4 OS=Oryza sativa subsp. japonica GN=NIT4 PE=2 SV=1//4.72377e-29",193500327,193505497,"-",72126,"downstream"]
["chr5","LNC_003671","XLOC_036891","lncRNA",191138044,191139436,"+","Zm00001d017268_T001","Zm00001d017268","sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2//1.56885e-87",191151367,191152674,"-",11930,"downstream"]
["chr2","LNC_002069","XLOC_020547","lncRNA",225552210,225553150,"-","Zm00001d007247_T001","Zm00001d007247","sp|Q8LPB4|PSKR1_DAUCA Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1//8.84773e-18",225598910,225599890,"-",45759,"downstream"]
["chr8","LNC_005538","XLOC_055393","lncRNA",116894882,116895136,"-","Zm00001d010470_T036","Zm00001d010470","sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2//0",116801111,116818574,"-",76307,"upstream"]
["chr2","LNC_002079","XLOC_020619","lncRNA",230274799,230275446,"-","Zm00001d007383_T018","Zm00001d007383","sp|C0HJB3|MANA_CANEN Alpha-mannosidase OS=Canavalia ensiformis PE=1 SV=1//2.40169e-179",230346726,230366492,"+",71279,"upstream"]
["chr2","LNC_002074","XLOC_020584","lncRNA",226885687,226887106,"-","Zm00001d007287_T003","Zm00001d007287","sp|Q943F3|RL18A_ORYSJ 60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1//5.19011e-44",226853254,226855789,"+",29897,"downstream"]
["chr2","LNC_002076","XLOC_020595","lncRNA",228795809,228796179,"-","Zm00001d007328_T003","Zm00001d007328","sp|Q8LEF6|AB11I_ARATH ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana GN=ABCI11 PE=2 SV=1//9.4867e-63",228717803,228722687,"+",73121,"downstream"]
["chr7","LNC_004669","XLOC_046843","lncRNA",49551745,49551960,"+","Zm00001d019670_T001","Zm00001d019670","sp|Q6YUL8|BC2_ORYSJ Kinesin-like protein BC2 OS=Oryza sativa subsp. japonica GN=BC2 PE=1 SV=1//1.47767e-16",49531543,49544253,"-",7491,"upstream"]
["chr7","LNC_004660","XLOC_046768","lncRNA",41512412,41512633,"+","Zm00001d019542_T007","Zm00001d019542",null,41594774,41601596,"-",82140,"downstream"]
["chrB73V4_ctg181","LNC_006202","XLOC_061745","lncRNA",309765,311102,"-","Zm00001d000181_T001","Zm00001d000181",null,248690,250107,"-",59657,"upstream"]
["chr2","LNC_001525","XLOC_014936","lncRNA",88925397,88925640,"+","Zm00001d004171_T001","Zm00001d004171","sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1//0",88958976,88963643,"+",33335,"upstream"]
["chr9","LNC_005956","XLOC_059555","lncRNA",22080318,22081670,"-","Zm00001d045434_T003","Zm00001d045434","sp|Q5VNU3|SEC1B_ORYSJ Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1//1.41146e-41",22058783,22075336,"+",4981,"downstream"]
["chr9","LNC_005950","XLOC_059528","lncRNA",20383588,20383881,"-","Zm00001d045389_T005","Zm00001d045389","sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3 SV=1//9.69484e-176",20391991,20396519,"-",8109,"downstream"]
["chr9","LNC_005959","XLOC_059578","lncRNA",23210957,23213631,"-","Zm00001d045462_T021","Zm00001d045462","sp|P04713|SSG1_MAIZE Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1//0",23107436,23111028,"-",99928,"upstream"]
["chr1","LNC_000692","XLOC_007213","lncRNA",195614260,195616049,"-","Zm00001d031587_T001","Zm00001d031587","sp|Q9FPT5|UBP1_ARATH Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana GN=UBP1 PE=1 SV=2//8.65506e-09",195526969,195531299,"-",82960,"upstream"]
["chr1","LNC_000695","XLOC_007230","lncRNA",196536441,196540196,"-","Zm00001d031621_T006","Zm00001d031621","sp|Q9T0I8|MTN1_ARATH 5&apos;-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 OS=Arabidopsis thaliana GN=MTN1 PE=1 SV=1//3.09985e-12",196575192,196583766,"+",34995,"upstream"]
["chr5","LNC_003806","XLOC_038623","lncRNA",52775319,52776078,"-","Zm00001d014550_T001","Zm00001d014550","sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1//1.11238e-07",52806371,52810404,"+",30292,"upstream"]
["chr5","LNC_003806","XLOC_038623","lncRNA",52775319,52776078,"-","Zm00001d014547_T001","Zm00001d014547",null,52711563,52712093,"-",63225,"upstream"]
["chr1","LNC_000340","XLOC_003534","lncRNA",248290992,248291747,"+","Zm00001d033037_T020","Zm00001d033037","sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=2 SV=2//1.75712e-81",248197932,248213798,"+",77193,"downstream"]
["chr1","LNC_000343","XLOC_003578","lncRNA",251231549,251231794,"+","Zm00001d022958_T001","Zm00001d022958",null,251184642,251184954,"+",46594,"downstream"]
["chr8","LNC_005320","XLOC_053365","lncRNA",155265806,155266100,"+","Zm00001d011595_T019","Zm00001d011595","sp|Q5QM84|TPC1_ORYSJ Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica GN=TPC1 PE=1 SV=2//6.72487e-35",155343627,155375974,"-",77526,"downstream"]
["chr8","LNC_005324","XLOC_053484","lncRNA",161689840,161690062,"+","Zm00001d011796_T004","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161717957,161722781,"-",27894,"downstream"]
["chr8","LNC_005324","XLOC_053484","lncRNA",161689840,161690062,"+","Zm00001d011796_T010","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161720100,161722781,"-",30037,"downstream"]
["chr8","LNC_005326","XLOC_053493","lncRNA",161818830,161819115,"+","Zm00001d011800_T001","Zm00001d011800",null,161728428,161729057,"+",89772,"downstream"]
["chr8","LNC_005329","XLOC_053540","lncRNA",164284966,164286125,"+","Zm00001d011904_T002","Zm00001d011904","sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1//3.2668e-43",164264227,164283828,"+",1137,"downstream"]
["chr5","LNC_003426","XLOC_034358","lncRNA",3872331,3872976,"+","Zm00001d013052_T004","Zm00001d013052","sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2//0",3881610,3885953,"+",8633,"upstream"]
["chr6","LNC_004050","XLOC_041086","lncRNA",8679135,8679379,"+","Zm00001d035191_T003","Zm00001d035191","sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1//4.37182e-29",8696067,8700892,"-",16687,"downstream"]
["chr10","LNC_000976","XLOC_009929","lncRNA",74190066,74190632,"+","Zm00001d024493_T004","Zm00001d024493","sp|P93736|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana GN=TWN2 PE=2 SV=2//3.62597e-08",74093411,74099375,"+",90690,"downstream"]
["chr10","LNC_000971","XLOC_009864","lncRNA",66574493,66574807,"+","Zm00001d024356_T001","Zm00001d024356",null,66564122,66569277,"+",5215,"downstream"]
["chr7","LNC_004589","XLOC_046236","lncRNA",4086430,4086876,"+","Zm00001d018746_T006","Zm00001d018746",null,4065254,4069219,"-",17210,"upstream"]
["chr7","LNC_004582","XLOC_046195","lncRNA",2655395,2656100,"+","Zm00001d018693_T001","Zm00001d018693","sp|Q9SQU6|PP216_ARATH Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1//0",2686485,2689002,"-",30384,"downstream"]
["chr7","LNC_004580","XLOC_046168","lncRNA",1521770,1522068,"+","Zm00001d018642_T007","Zm00001d018642","sp|Q58E77|WD82B_XENLA WD repeat-containing protein 82-B OS=Xenopus laevis GN=wdr82-b PE=2 SV=1//2.39875e-65",1465060,1470363,"-",51406,"upstream"]
["chr7","LNC_004584","XLOC_046215","lncRNA",3124695,3124997,"+","Zm00001d018717_T001","Zm00001d018717",null,3068238,3068822,"+",55872,"downstream"]
["chr3","LNC_002197","XLOC_021912","lncRNA",71474835,71481237,"+","Zm00001d040850_T002","Zm00001d040850","sp|Q9SQT8|DHQSD_ARATH Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1 SV=1//1.03898e-15",71571869,71601459,"+",90631,"upstream"]
["chr4","LNC_003058","XLOC_030378","lncRNA",222714568,222719139,"+","Zm00001d053255_T001","Zm00001d053255",null,222639284,222640506,"-",74061,"upstream"]
["chr4","LNC_003059","XLOC_030383","lncRNA",222955430,222955787,"+","Zm00001d053260_T001","Zm00001d053260","sp|Q54LB8|VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1//1.11996e-36",222931270,222948448,"+",6981,"downstream"]
["chr4","LNC_003052","XLOC_030363","lncRNA",220846363,220849037,"+","Zm00001d053225_T007","Zm00001d053225","sp|Q6ZJJ0|BGA11_ORYSJ Beta-galactosidase 11 OS=Oryza sativa subsp. japonica GN=Os08g0549200 PE=2 SV=1//4.14354e-111",220840816,220845933,"+",429,"downstream"]
["chr4","LNC_003053","XLOC_030370","lncRNA",221594030,221594610,"+","Zm00001d053240_T001","Zm00001d053240",null,221660755,221661906,"-",66144,"downstream"]
["chr1","LNC_000593","XLOC_006417","lncRNA",123438116,123438629,"-","Zm00001d030340_T057","Zm00001d030340",null,123384527,123423333,"-",14782,"upstream"]
["chr1","LNC_000595","XLOC_006435","lncRNA",125698823,125699135,"-","Zm00001d030357_T002","Zm00001d030357","sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana GN=UBP9 PE=2 SV=1//4.11081e-62",125658990,125678469,"-",20353,"upstream"]
["chr8","LNC_005112","XLOC_051267","lncRNA",6141160,6143013,"+","Zm00001d008356_T002","Zm00001d008356","sp|Q0JP11|C3H3_ORYSJ Zinc finger CCCH domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=Os01g0252200 PE=2 SV=2//1.28693e-32",6168205,6172159,"-",25191,"downstream"]
["chr1","LNC_000471","XLOC_005182","lncRNA",25537350,25537566,"-","Zm00001d028177_T024","Zm00001d028177","sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. indica GN=UBP26 PE=3 SV=1//3.19583e-24",25547722,25566243,"-",10155,"downstream"]
["chr8","LNC_005117","XLOC_051284","lncRNA",6697835,6698265,"+","Zm00001d008371_T001","Zm00001d008371","sp|Q9SYH2|TAF9_ARATH Transcription initiation factor TFIID subunit 9 OS=Arabidopsis thaliana GN=TAF9 PE=1 SV=1//3.70886e-25",6658626,6660882,"-",36952,"upstream"]
["chr8","LNC_005114","XLOC_051271","lncRNA",6149345,6150715,"+","Zm00001d008357_T009","Zm00001d008357","sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2//0",6174626,6177495,"-",23910,"downstream"]
["chr2","LNC_001759","XLOC_017515","lncRNA",11553298,11565818,"-","Zm00001d002388_T001","Zm00001d002388","sp|Q9C512|MNS1_ARATH Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 OS=Arabidopsis thaliana GN=MNS1 PE=1 SV=1//0",11653880,11664151,"-",88061,"downstream"]
["chr2","LNC_001751","XLOC_017346","lncRNA",5567647,5567899,"-","Zm00001d002082_T013","Zm00001d002082","sp|C5H8J1|EME1B_ARATH Crossover junction endonuclease EME1B OS=Arabidopsis thaliana GN=EME1B PE=1 SV=1//4.0832e-06",5631297,5637273,"-",63397,"downstream"]
["chr2","LNC_001751","XLOC_017346","lncRNA",5567647,5567899,"-","Zm00001d002082_T005","Zm00001d002082","sp|C5H8J1|EME1B_ARATH Crossover junction endonuclease EME1B OS=Arabidopsis thaliana GN=EME1B PE=1 SV=1//4.0832e-06",5631271,5638279,"-",63371,"downstream"]
["chr2","LNC_001752","XLOC_017355","lncRNA",5928738,5929152,"-","Zm00001d002099_T001","Zm00001d002099","sp|Q9M0A4|CNGC9_ARATH Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=2 SV=1//5.17497e-47",5969116,5978995,"-",39963,"downstream"]
["chr2","LNC_001755","XLOC_017402","lncRNA",6895953,6896206,"-","Zm00001d002163_T004","Zm00001d002163","sp|Q9C5E5|DGK5_ARATH Diacylglycerol kinase 5 OS=Arabidopsis thaliana GN=DGK5 PE=2 SV=1//1.18935e-25",6959958,6961209,"-",63751,"downstream"]
["chr2","LNC_001757","XLOC_017489","lncRNA",10424875,10425178,"-","Zm00001d002332_T006","Zm00001d002332","sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1//1.03976e-113",10488892,10496200,"-",63713,"downstream"]
["chr2","LNC_001756","XLOC_017406","lncRNA",7116461,7119512,"-","Zm00001d002169_T009","Zm00001d002169","sp|Q9XHM1|EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C OS=Medicago truncatula GN=TIF3C1 PE=2 SV=1//0",7094309,7096733,"+",19727,"downstream"]
["chr7","LNC_004872","XLOC_048928","lncRNA",14094980,14095236,"-","Zm00001d019047_T001","Zm00001d019047",null,14098696,14101556,"-",3459,"downstream"]
["chr7","LNC_004877","XLOC_048968","lncRNA",16968091,16968333,"-","Zm00001d019106_T013","Zm00001d019106","sp|Q6Z382|COPG2_ORYSJ Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1//6.7603e-23",16899730,16907195,"+",60895,"downstream"]
["chr7","LNC_004874","XLOC_048937","lncRNA",14809697,14810132,"-","Zm00001d019061_T010","Zm00001d019061","sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1//2.05227e-19",14732537,14740133,"-",69563,"upstream"]
["chr7","LNC_004878","XLOC_048970","lncRNA",17118132,17118332,"-","Zm00001d019108_T021","Zm00001d019108","sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp5 PE=1 SV=1//7.90867e-12",17216490,17235269,"+",98157,"upstream"]
["chr10","LNC_001348","XLOC_013321","lncRNA",147546821,147588443,"-","Zm00001d026515_T008","Zm00001d026515","sp|Q39054|CNX1_ARATH Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=2//0",147456535,147460691,"+",86129,"downstream"]
["chr10","LNC_001346","XLOC_013312","lncRNA",147467600,147467874,"-","Zm00001d026519_T001","Zm00001d026519",null,147477161,147478119,"-",9286,"downstream"]
["chr10","LNC_001346","XLOC_013312","lncRNA",147467600,147467874,"-","Zm00001d026511_T026","Zm00001d026511","sp|Q9LJD8|M3KE1_ARATH MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana GN=M3KE1 PE=1 SV=1//0",147370615,147387588,"-",80011,"upstream"]
["chr10","LNC_001346","XLOC_013312","lncRNA",147467600,147467874,"-","Zm00001d026511_T069","Zm00001d026511","sp|Q9LJD8|M3KE1_ARATH MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana GN=M3KE1 PE=1 SV=1//0",147370630,147383464,"-",84135,"upstream"]
["chr10","LNC_001346","XLOC_013312","lncRNA",147467600,147467874,"-","Zm00001d026511_T072","Zm00001d026511","sp|Q9LJD8|M3KE1_ARATH MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana GN=M3KE1 PE=1 SV=1//0",147370630,147387613,"-",79986,"upstream"]
["chr10","LNC_001345","XLOC_013282","lncRNA",146389433,146389716,"-","Zm00001d026463_T001","Zm00001d026463",null,146324020,146327524,"+",61908,"downstream"]
["chr10","LNC_001342","XLOC_013232","lncRNA",144570909,144571176,"-","Zm00001d026377_T001","Zm00001d026377","sp|Q9LHQ6|OCT4_ARATH Organic cation/carnitine transporter 4 OS=Arabidopsis thaliana GN=OCT4 PE=2 SV=1//0",144637101,144640154,"+",65924,"upstream"]
["chr10","LNC_001343","XLOC_013238","lncRNA",144910134,144912420,"-","Zm00001d026382_T001","Zm00001d026382","sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=2 SV=1//1.19642e-12",144818522,144822103,"-",88030,"upstream"]
["chr10","LNC_001341","XLOC_013230","lncRNA",144506585,144506912,"-","Zm00001d026374_T001","Zm00001d026374","sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp. japonica GN=FSM PE=2 SV=1//1.05403e-16",144605146,144613259,"-",98233,"downstream"]
["chr10","LNC_001341","XLOC_013230","lncRNA",144506585,144506912,"-","Zm00001d026374_T011","Zm00001d026374","sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp. japonica GN=FSM PE=2 SV=1//1.05403e-16",144605716,144613330,"-",98803,"downstream"]
["chr2","LNC_001962","XLOC_019272","lncRNA",151976906,151977292,"-","Zm00001d004979_T010","Zm00001d004979","sp|Q9FGI1|LTN1_ARATH E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana GN=At5g58410 PE=3 SV=1//4.66908e-174",151892671,151898895,"-",78010,"upstream"]
["chr2","LNC_001960","XLOC_019261","lncRNA",150794773,150795193,"-","Zm00001d004962_T001","Zm00001d004962",null,150765037,150767622,"-",27150,"upstream"]
["chr8","LNC_005515","XLOC_055193","lncRNA",99306169,99306428,"-","Zm00001d010107_T001","Zm00001d010107","sp|O93530|WRN_XENLA Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1//1.00242e-11",99290611,99294991,"-",11177,"upstream"]
["chr8","LNC_005510","XLOC_055165","lncRNA",97164713,97165011,"-","Zm00001d010050_T002","Zm00001d010050","sp|Q9SRL4|ENAS2_ARATH Cytosolic endo-beta-N-acetylglucosaminidase 2 OS=Arabidopsis thaliana GN=ENGASE2 PE=1 SV=1//4.36782e-13",97186607,97202743,"-",21595,"downstream"]
["chr2","LNC_002056","XLOC_020316","lncRNA",217736808,217737567,"-","Zm00001d006845_T001","Zm00001d006845","sp|Q8H3A7|XPOT_ORYSJ Exportin-T OS=Oryza sativa subsp. japonica GN=Os07g0613300 PE=2 SV=1//3.63664e-108",217770387,217777900,"+",32819,"upstream"]
["chr2","LNC_002056","XLOC_020316","lncRNA",217736808,217737567,"-","Zm00001d006837_T003","Zm00001d006837","sp|Q944H0|PEAM2_ARATH Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2//2.03662e-17",217662703,217666412,"-",70395,"upstream"]
["chr2","LNC_002054","XLOC_020266","lncRNA",215923803,215924075,"-","Zm00001d006753_T003","Zm00001d006753","sp|Q0D4Z6|GH38_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1//0",215957427,215959700,"-",33351,"downstream"]
["chr2","LNC_002053","XLOC_020214","lncRNA",213323451,213323782,"-","Zm00001d006645_T021","Zm00001d006645","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//1.88375e-13",213336356,213343511,"+",12573,"upstream"]
["chr2","LNC_002052","XLOC_020203","lncRNA",212881443,212881816,"-","Zm00001d006628_T002","Zm00001d006628","sp|Q94KE2|TIC_ARATH Protein TIME FOR COFFEE OS=Arabidopsis thaliana GN=TIC PE=1 SV=2//7.12336e-27",212884841,212891564,"-",3024,"downstream"]
["chr2","LNC_002058","XLOC_020340","lncRNA",218578793,218583723,"-","Zm00001d006885_T001","Zm00001d006885","sp|Q9SCS2|CAMK5_ARATH CDPK-related kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=2 SV=1//0",218537811,218542431,"-",36361,"upstream"]
["chr4","LNC_003265","XLOC_032395","lncRNA",140095349,140095585,"-","Zm00001d051065_T001","Zm00001d051065","sp|Q84L14|NCBP2_ORYSJ Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica GN=CBP20 PE=2 SV=1//2.59431e-08",140072303,140076402,"-",18946,"upstream"]
["chr7","LNC_004649","XLOC_046644","lncRNA",29445289,29445986,"+","Zm00001d019357_T003","Zm00001d019357",null,29506339,29510783,"-",60352,"downstream"]
["chr7","LNC_004644","XLOC_046584","lncRNA",25129054,25130479,"+","Zm00001d019270_T001","Zm00001d019270",null,25085888,25086445,"+",42608,"downstream"]
["chr7","LNC_004641","XLOC_046555","lncRNA",22679672,22680768,"+","Zm00001d019226_T011","Zm00001d019226","sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2 OS=Arabidopsis thaliana GN=HMA2 PE=2 SV=1//0",22695931,22699133,"+",15162,"upstream"]
["chr2","LNC_001501","XLOC_014820","lncRNA",76053948,76054170,"+","Zm00001d004022_T004","Zm00001d004022","sp|Q8GYN5|RIN4_ARATH RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1//1.47112e-15",76081400,76085628,"-",27229,"downstream"]
["chr1","LNC_000064","XLOC_000870","lncRNA",43009095,43009339,"+","Zm00001d028687_T001","Zm00001d028687","sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2//0",43083284,43088852,"-",73944,"downstream"]
["chr5","LNC_003867","XLOC_039331","lncRNA",115328593,115332373,"-","Zm00001d015742_T001","Zm00001d015742","sp|Q9XI29|Y1540_ARATH Uncharacterized protein At1g15400 OS=Arabidopsis thaliana GN=At1g15400 PE=1 SV=2//7.41601e-07",115418527,115418937,"+",86153,"upstream"]
["chr1","LNC_000369","XLOC_003887","lncRNA",267267745,267268208,"+","Zm00001d033562_T001","Zm00001d033562",null,267238978,267239050,"-",28694,"upstream"]
["chr1","LNC_000367","XLOC_003869","lncRNA",266243642,266244117,"+","Zm00001d033537_T004","Zm00001d033537",null,266336630,266337730,"+",92512,"upstream"]
["chr1","LNC_000364","XLOC_003812","lncRNA",263074351,263074917,"+","Zm00001d033451_T004","Zm00001d033451","sp|Q0WQ41|IP5P7_ARATH Type IV inositol polyphosphate 5-phosphatase 7 OS=Arabidopsis thaliana GN=IP5P7 PE=1 SV=1//0",263011446,263016265,"-",58085,"upstream"]
["chr1","LNC_000362","XLOC_003776","lncRNA",261792920,261795328,"+","Zm00001d033397_T006","Zm00001d033397","sp|Q9ZQR4|Y2452_ARATH DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana GN=CBSDUF3 PE=2 SV=2//2.42352e-09",261810829,261821001,"-",15500,"downstream"]
["chr3","LNC_002732","XLOC_027158","lncRNA",217087302,217087543,"-","Zm00001d044023_T023","Zm00001d044023","sp|F4JUU5|S2P_ARATH Membrane-bound transcription factor site-2 protease homolog OS=Arabidopsis thaliana GN=S2P PE=2 SV=2//1.1272e-11",217000698,217008733,"+",78568,"downstream"]
["chr3","LNC_002733","XLOC_027171","lncRNA",217971141,217973277,"-","Zm00001d044057_T009","Zm00001d044057","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//4.06338e-21",218051012,218074725,"-",77734,"downstream"]
["chr3","LNC_002730","XLOC_027145","lncRNA",216211237,216211523,"-","Zm00001d043998_T002","Zm00001d043998","sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica GN=UBC5A PE=2 SV=1//7.9157e-07",216138268,216142177,"+",69059,"downstream"]
["chr3","LNC_002737","XLOC_027247","lncRNA",221327401,221327608,"-","Zm00001d044186_T002","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397672,221405456,"+",70063,"upstream"]
["chr3","LNC_002737","XLOC_027247","lncRNA",221327401,221327608,"-","Zm00001d044186_T155","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397778,221398632,"+",70169,"upstream"]
["chr3","LNC_002737","XLOC_027247","lncRNA",221327401,221327608,"-","Zm00001d044186_T176","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397820,221405563,"+",70211,"upstream"]
["chr3","LNC_002737","XLOC_027247","lncRNA",221327401,221327608,"-","Zm00001d044186_T202","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221398303,221414996,"+",70694,"upstream"]
["chr3","LNC_002737","XLOC_027247","lncRNA",221327401,221327608,"-","Zm00001d044186_T185","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397867,221405516,"+",70258,"upstream"]
["chr3","LNC_002737","XLOC_027247","lncRNA",221327401,221327608,"-","Zm00001d044186_T032","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397733,221405608,"+",70124,"upstream"]
["chr3","LNC_002738","XLOC_027249","lncRNA",221445446,221446120,"-","Zm00001d044186_T187","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397867,221405517,"+",39928,"downstream"]
["chr3","LNC_002738","XLOC_027249","lncRNA",221445446,221446120,"-","Zm00001d044186_T267","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221401010,221405515,"+",39930,"downstream"]
["chr3","LNC_002738","XLOC_027249","lncRNA",221445446,221446120,"-","Zm00001d044186_T069","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397738,221405517,"+",39928,"downstream"]
["chr3","LNC_002738","XLOC_027249","lncRNA",221445446,221446120,"-","Zm00001d044186_T189","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397925,221405517,"+",39928,"downstream"]
["chr3","LNC_002738","XLOC_027249","lncRNA",221445446,221446120,"-","Zm00001d044186_T115","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397742,221405516,"+",39929,"downstream"]
["chr3","LNC_002738","XLOC_027249","lncRNA",221445446,221446120,"-","Zm00001d044186_T032","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",221397733,221405608,"+",39837,"downstream"]
["chr3","LNC_002739","XLOC_027251","lncRNA",221600946,221601181,"-","Zm00001d044195_T006","Zm00001d044195","sp|Q9FGL9|PTBP2_ARATH Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana GN=At5g53180 PE=1 SV=1//8.78327e-21",221637022,221642620,"+",35840,"upstream"]
["chr4","LNC_002884","XLOC_028686","lncRNA",88047736,88048923,"+","Zm00001d050436_T001","Zm00001d050436",null,88042697,88043923,"-",3812,"upstream"]
["chr10","LNC_001282","XLOC_012709","lncRNA",121809132,121809369,"-","Zm00001d025539_T013","Zm00001d025539","sp|Q8VWF6|SSL3_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana GN=SSL3 PE=2 SV=1//6.84628e-22",121727913,121731333,"-",77798,"upstream"]
["chr10","LNC_001281","XLOC_012705","lncRNA",121649710,121649936,"-","Zm00001d025539_T012","Zm00001d025539","sp|Q8VWF6|SSL3_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana GN=SSL3 PE=2 SV=1//6.84628e-22",121727913,121730994,"-",77976,"downstream"]
["chr10","LNC_001284","XLOC_012761","lncRNA",124349817,124350683,"-","Zm00001d025624_T001","Zm00001d025624",null,124380367,124383628,"+",29683,"upstream"]
["chr10","LNC_001289","XLOC_012800","lncRNA",125921346,125921834,"-","Zm00001d025673_T009","Zm00001d025673","sp|A6NDY0|EPAB2_HUMAN Embryonic polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1L PE=2 SV=1//8.86959e-11",125893020,125901750,"+",19595,"downstream"]
["chr9","LNC_005708","XLOC_057253","lncRNA",28124144,28125231,"+","Zm00001d045597_T050","Zm00001d045597","sp|F4JQZ3|REN1_ARATH Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana GN=REN1 PE=1 SV=2//9.20689e-08",28031915,28046966,"-",77177,"upstream"]
["chr9","LNC_005708","XLOC_057253","lncRNA",28124144,28125231,"+","Zm00001d045597_T034","Zm00001d045597","sp|F4JQZ3|REN1_ARATH Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana GN=REN1 PE=1 SV=2//9.20689e-08",28031881,28047305,"-",76838,"upstream"]
["chr10","LNC_000957","XLOC_009770","lncRNA",58466311,58466663,"+","Zm00001d024229_T001","Zm00001d024229","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//1.15491e-71",58417186,58421805,"+",44505,"downstream"]
["chr9","LNC_005850","XLOC_058352","lncRNA",123033642,123034126,"+","Zm00001d047228_T002","Zm00001d047228","sp|O49169|EF1A_MANES Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1//5.14517e-15",123044874,123047139,"-",10747,"downstream"]
["chr9","LNC_005855","XLOC_058417","lncRNA",126974243,126974458,"+","Zm00001d047347_T007","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127076220,"+",96173,"upstream"]
["chr9","LNC_005855","XLOC_058417","lncRNA",126974243,126974458,"+","Zm00001d047347_T017","Zm00001d047347","sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1//2.34808e-69",127070632,127076473,"+",96173,"upstream"]
["chr9","LNC_005858","XLOC_058447","lncRNA",128629085,128629955,"+","Zm00001d047397_T001","Zm00001d047397","sp|Q2VZH2|CCME_MAGSA Cytochrome c-type biogenesis protein CcmE OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=ccmE PE=3 SV=1//1.13873e-25",128704007,128704783,"+",74051,"upstream"]
["chr7","LNC_004850","XLOC_048643","lncRNA",180132560,180133506,"+","Zm00001d022560_T009","Zm00001d022560","sp|P93648|LONM_MAIZE Lon protease homolog, mitochondrial OS=Zea mays GN=LON2 PE=1 SV=1//0",180055239,180064698,"+",67861,"downstream"]
["chr2","LNC_001773","XLOC_017702","lncRNA",21230421,21230739,"-","Zm00001d002741_T001","Zm00001d002741","sp|Q7XDC8|MDHC_ORYSJ Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3//1.09232e-160",21195675,21197462,"+",32958,"downstream"]
["chr2","LNC_001770","XLOC_017680","lncRNA",19988576,19988793,"-","Zm00001d002711_T004","Zm00001d002711","sp|Q7XSN8|SRR_ORYSJ Serine racemase OS=Oryza sativa subsp. japonica GN=SERR PE=1 SV=2//2.35464e-22",19965490,19967919,"+",20656,"downstream"]
["chr2","LNC_001776","XLOC_017735","lncRNA",22930623,22931014,"-","Zm00001d002796_T006","Zm00001d002796","sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1//1.70469e-10",22828895,22832670,"-",97952,"upstream"]
["chr6","LNC_004321","XLOC_043596","lncRNA",4663047,4668681,"-","Zm00001d035088_T002","Zm00001d035088","sp|Q54LN2|VP13D_DICDI Putative vacuolar protein sorting-associated protein 13D OS=Dictyostelium discoideum GN=vps13D PE=3 SV=1//7.26229e-33",4651794,4659867,"-",3179,"upstream"]
["chr6","LNC_004320","XLOC_043576","lncRNA",3188367,3188647,"-","Zm00001d035053_T002","Zm00001d035053","sp|Q0J8G8|MAD26_ORYSJ MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1//2.74229e-120",3271742,3274263,"+",83094,"upstream"]
["chr7","LNC_004814","XLOC_048111","lncRNA",156426754,156427012,"+","Zm00001d021570_T005","Zm00001d021570","sp|Q64323|PIGA_MOUSE N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein OS=Mus musculus GN=Piga PE=2 SV=1//5.60813e-150",156411700,156416417,"-",10336,"upstream"]
["chr7","LNC_004817","XLOC_048189","lncRNA",160831377,160831709,"+","Zm00001d021701_T001","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737172,160741135,"-",90241,"upstream"]
["chr7","LNC_004811","XLOC_048094","lncRNA",155643055,155643255,"+","Zm00001d021553_T008","Zm00001d021553","sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2//6.85616e-119",155738061,155748551,"+",94805,"upstream"]
["chr7","LNC_004810","XLOC_048090","lncRNA",155499330,155501891,"+","Zm00001d021545_T001","Zm00001d021545","sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1//7.67677e-82",155507985,155511612,"+",6093,"upstream"]
["chr7","LNC_004812","XLOC_048104","lncRNA",155749892,155750984,"+","Zm00001d021553_T042","Zm00001d021553","sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2//6.85616e-119",155738107,155748574,"+",1317,"downstream"]
["chr7","LNC_004812","XLOC_048104","lncRNA",155749892,155750984,"+","Zm00001d021551_T002","Zm00001d021551","sp|O80501|RAH1B_ARATH Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1//8.24901e-117",155647955,155651800,"+",98091,"downstream"]
["chr2","LNC_001360","XLOC_013504","lncRNA",2340546,2340767,"+","Zm00001d001884_T001","Zm00001d001884",null,2349516,2354941,"+",8748,"upstream"]
["chr2","LNC_001360","XLOC_013504","lncRNA",2340546,2340767,"+","Zm00001d001879_T016","Zm00001d001879","sp|Q258Y5|ARFL_ORYSI Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12 PE=3 SV=1//1.29623e-09",2248074,2255944,"+",84601,"downstream"]
["chr2","LNC_001361","XLOC_013522","lncRNA",2602697,2602919,"+","Zm00001d001903_T002","Zm00001d001903","sp|Q0J969|CAEH1_ORYSJ Probable carboxylesterase Os04g0669500 OS=Oryza sativa subsp. japonica GN=Os04g0669500 PE=3 SV=1//1.55871e-20",2637042,2639651,"+",34122,"upstream"]
["chr2","LNC_001362","XLOC_013577","lncRNA",3969027,3969682,"+","Zm00001d001980_T003","Zm00001d001980","sp|Q55G83|ABKC_DICDI Probable serine/threonine-protein kinase abkC OS=Dictyostelium discoideum GN=abkC PE=3 SV=1//2.95345e-86",3876045,3880627,"+",88399,"downstream"]
["chr2","LNC_001363","XLOC_013587","lncRNA",4291264,4294663,"+","Zm00001d002012_T001","Zm00001d002012","sp|Q949W6|KAKU4_ARATH Protein KAKU4 OS=Arabidopsis thaliana GN=KAKU4 PE=1 SV=1//3.00115e-10",4325836,4336208,"-",31172,"downstream"]
["chr2","LNC_001366","XLOC_013623","lncRNA",5266930,5267558,"+","Zm00001d002069_T001","Zm00001d002069",null,5364541,5364798,"+",96982,"upstream"]
["chr2","LNC_001367","XLOC_013634","lncRNA",5618462,5618926,"+","Zm00001d002084_T002","Zm00001d002084","sp|O13747|EPT1_SCHPO RING finger protein ETP1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC16E8.13 PE=3 SV=1//2.30256e-10",5711305,5715273,"+",92378,"upstream"]
["chr2","LNC_001369","XLOC_013655","lncRNA",6290188,6290789,"+","Zm00001d002125_T031","Zm00001d002125","sp|Q9LK40|NRPD2_ARATH DNA-directed RNA polymerases IV and V subunit 2 OS=Arabidopsis thaliana GN=NRPD2 PE=1 SV=1//1.32359e-112",6290938,6302553,"-",148,"downstream"]
["chr2","LNC_001369","XLOC_013655","lncRNA",6290188,6290789,"+","Zm00001d000750_T001","Zm00001d000750",null,6318243,6318677,"-",27453,"downstream"]
["chr5","LNC_003633","XLOC_036406","lncRNA",160899543,160900169,"+","Zm00001d016397_T013","Zm00001d016397",null,160952454,160958092,"-",52284,"downstream"]
["chr5","LNC_003634","XLOC_036410","lncRNA",161226089,161232613,"+","Zm00001d016409_T001","Zm00001d016409","sp|Q8GU88|AB39G_ORYSJ ABC transporter G family member 39 OS=Oryza sativa subsp. japonica GN=ABCG39 PE=3 SV=1//9.32895e-50",161319653,161321285,"-",87039,"downstream"]
["chr5","LNC_003635","XLOC_036410","lncRNA",161226089,161235787,"+","Zm00001d016406_T002","Zm00001d016406","sp|Q8RXE7|AGD14_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2//3.40415e-10",161249471,161263832,"-",13683,"downstream"]
["chr5","LNC_003635","XLOC_036410","lncRNA",161226089,161235787,"+","Zm00001d016406_T004","Zm00001d016406","sp|Q8RXE7|AGD14_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2//3.40415e-10",161249486,161263827,"-",13698,"downstream"]
["chr5","LNC_003637","XLOC_036427","lncRNA",162520050,162520348,"+","Zm00001d016442_T007","Zm00001d016442","sp|Q6H6E6|DI194_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1//2.9756e-19",162540652,162548041,"+",20303,"upstream"]
["chr8","LNC_005289","XLOC_052962","lncRNA",132321708,132321943,"+","Zm00001d010892_T009","Zm00001d010892","sp|O24467|LE14B_PRUAR LEC14B homolog OS=Prunus armeniaca PE=2 SV=1//8.41717e-15",132353678,132361252,"+",31734,"upstream"]
["chr8","LNC_005284","XLOC_052931","lncRNA",129891191,129891505,"+","Zm00001d010842_T005","Zm00001d010842","sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1//8.24956e-93",129920062,129926481,"-",28556,"downstream"]
["chr8","LNC_005282","XLOC_052905","lncRNA",127739878,127740156,"+","Zm00001d010784_T004","Zm00001d010784","sp|O97067|PTH2_DROME Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=2 SV=2//4.47239e-28",127677607,127682293,"-",57584,"upstream"]
["chr4","LNC_002945","XLOC_029067","lncRNA",135581444,135581761,"+","Zm00001d050989_T001","Zm00001d050989","sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3//1.86561e-22",135644800,135655106,"-",63038,"downstream"]
["chr2","LNC_001945","XLOC_019082","lncRNA",130656143,130656372,"-","Zm00001d004686_T001","Zm00001d004686",null,130572304,130574566,"+",81576,"downstream"]
["chr1","LNC_000015","XLOC_000159","lncRNA",7329869,7330099,"+","Zm00001d027523_T005","Zm00001d027523","sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1//2.91184e-110",7395084,7399569,"+",64984,"upstream"]
["chr1","LNC_000014","XLOC_000135","lncRNA",5987952,5988244,"+","Zm00001d027465_T001","Zm00001d027465",null,5888817,5888890,"-",99061,"upstream"]
["chr1","LNC_000514","XLOC_005671","lncRNA",56115172,56115413,"-","Zm00001d029053_T006","Zm00001d029053","sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2 SV=1//5.96153e-31",56214311,56220464,"-",98897,"downstream"]
["chr1","LNC_000514","XLOC_005671","lncRNA",56115172,56115413,"-","Zm00001d029046_T023","Zm00001d029046","sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1//2.28274e-88",56031626,56037649,"+",77522,"downstream"]
["chr8","LNC_005314","XLOC_053338","lncRNA",153750218,153751388,"+","Zm00001d011532_T002","Zm00001d011532","sp|Q93VQ0|VCL1_ARATH Protein VACUOLELESS1 OS=Arabidopsis thaliana GN=VCL1 PE=1 SV=1//0",153672070,153702835,"+",47382,"downstream"]
["chr1","LNC_000237","XLOC_002350","lncRNA",175184109,175184347,"+","Zm00001d031058_T002","Zm00001d031058","sp|Q10R93|RMR1_ORYSJ Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0167500 PE=2 SV=1//0",175149398,175154334,"+",29774,"downstream"]
["chr7","LNC_004624","XLOC_046370","lncRNA",10843002,10843229,"+","Zm00001d018962_T001","Zm00001d018962",null,10831566,10833533,"+",9468,"downstream"]
["chr7","LNC_004625","XLOC_046372","lncRNA",10866566,10866812,"+","Zm00001d018966_T001","Zm00001d018966","sp|Q8L5C6|XIP1_WHEAT Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2//6.18245e-148",10934095,10935021,"+",67282,"upstream"]
["chr2","LNC_001566","XLOC_015116","lncRNA",113477730,113478057,"+","Zm00001d004463_T013","Zm00001d004463","sp|Q9M8Z7|U80A2_ARATH Sterol 3-beta-glucosyltransferase UGT80A2 OS=Arabidopsis thaliana GN=UGT80A2 PE=1 SV=1//2.96164e-07",113537802,113567649,"+",59744,"upstream"]
["chr2","LNC_001567","XLOC_015118","lncRNA",113595447,113595653,"+","Zm00001d004466_T022","Zm00001d004466","sp|Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana GN=At3g07100 PE=2 SV=2//5.80763e-59",113646807,113652218,"-",51153,"downstream"]
["chr2","LNC_001560","XLOC_015094","lncRNA",111689801,111698883,"+","Zm00001d000894_T001","Zm00001d000894",null,111687802,111688486,"+",1314,"downstream"]
["chr1","LNC_000805","XLOC_008300","lncRNA",263893869,263906850,"-","Zm00001d033484_T002","Zm00001d033484","sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1//7.8381e-53",263984390,263986903,"-",77539,"downstream"]
["chr5","LNC_003841","XLOC_039164","lncRNA",93613824,93619143,"-","Zm00001d015493_T004","Zm00001d015493",null,93597428,93601972,"-",11851,"upstream"]
["chr1","LNC_000382","XLOC_004041","lncRNA",275507020,275507273,"+","Zm00001d033845_T001","Zm00001d033845",null,275595305,275595378,"-",88031,"downstream"]
["chr1","LNC_000384","XLOC_004069","lncRNA",277725881,277726213,"+","Zm00001d033891_T002","Zm00001d033891",null,277637060,277639000,"+",86880,"downstream"]
["chr1","LNC_000389","XLOC_004117","lncRNA",279947257,279948474,"+","Zm00001d033976_T003","Zm00001d033976","sp|Q10D34|IAA13_ORYSJ Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1//1.8329e-69",279923098,279925583,"-",21673,"upstream"]
["chr1","LNC_000389","XLOC_004117","lncRNA",279947257,279948474,"+","Zm00001d033982_T017","Zm00001d033982","sp|Q54XJ4|Y8901_DICDI Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1//7.66081e-17",280031096,280040321,"-",82621,"downstream"]
["chr3","LNC_002710","XLOC_026899","lncRNA",204417800,204418070,"-","Zm00001d043587_T001","Zm00001d043587","sp|Q8L4B0|GAUTF_ARATH Probable galacturonosyltransferase 15 OS=Arabidopsis thaliana GN=GAUT15 PE=2 SV=1//4.7912e-83",204443266,204446887,"-",25195,"downstream"]
["chr3","LNC_002711","XLOC_026920","lncRNA",205151515,205152172,"-","Zm00001d043613_T002","Zm00001d043613","sp|Q9CR50|ZN363_MOUSE RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1//1.81921e-46",205192540,205198352,"-",40367,"downstream"]
["chr3","LNC_002719","XLOC_027018","lncRNA",209668766,209669160,"-","Zm00001d043773_T005","Zm00001d043773","sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2//8.0656e-22",209660494,209667069,"-",1696,"upstream"]
["chr5","LNC_004018","XLOC_040736","lncRNA",216062803,216063089,"-","Zm00001d018185_T001","Zm00001d018185","sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2//2.6228e-67",215979219,215981867,"-",80935,"upstream"]
["chr5","LNC_004016","XLOC_040705","lncRNA",214957601,214958464,"-","Zm00001d018133_T016","Zm00001d018133",null,215034850,215049708,"+",76385,"upstream"]
["chr5","LNC_004011","XLOC_040677","lncRNA",214041264,214041689,"-","Zm00001d018088_T003","Zm00001d018088","sp|Q84JR9|TTL4_ARATH TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana GN=TTL4 PE=2 SV=1//5.39918e-71",213989034,213991716,"-",49547,"upstream"]
["chr5","LNC_004010","XLOC_040662","lncRNA",213242965,213243224,"-","Zm00001d018050_T012","Zm00001d018050","sp|Q1PFE1|AIL1_ARATH AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1//1.96762e-09",213161732,213165112,"-",77852,"upstream"]
["chr8","LNC_005493","XLOC_054994","lncRNA",79741960,79742485,"-","Zm00001d009752_T001","Zm00001d009752","sp|Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1//1.88916e-07",79782869,79784324,"+",40383,"upstream"]
["chr8","LNC_005490","XLOC_054962","lncRNA",77262831,77263167,"-","Zm00001d009712_T001","Zm00001d009712",null,77220038,77220108,"-",42722,"upstream"]
["chr8","LNC_005495","XLOC_055004","lncRNA",80193107,80193313,"-","Zm00001d009768_T001","Zm00001d009768","sp|Q381V6|PIF4_TRYB2 ATP-dependent DNA helicase PIF4 OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) GN=PIF4 PE=3 SV=1//3.17702e-12",80269932,80275090,"+",76618,"upstream"]
["chr7","LNC_005061","XLOC_050763","lncRNA",167877521,167877884,"-","Zm00001d022000_T047","Zm00001d022000","sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3//1.92262e-13",167789010,167792896,"+",84624,"downstream"]
["chr7","LNC_005061","XLOC_050763","lncRNA",167877521,167877884,"-","Zm00001d022006_T001","Zm00001d022006",null,167846765,167848830,"-",28690,"upstream"]
["chr3","LNC_002153","XLOC_021503","lncRNA",31769675,31769895,"+","Zm00001d040202_T005","Zm00001d040202","sp|Q5RBR3|CHMP5_PONAB Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1//8.18321e-31",31827897,31838331,"+",58001,"upstream"]
["chr3","LNC_002158","XLOC_021554","lncRNA",34699646,34699855,"+","Zm00001d040263_T003","Zm00001d040263","sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2//0",34652684,34657161,"+",42484,"downstream"]
["chr3","LNC_002159","XLOC_021557","lncRNA",35169878,35170127,"+","Zm00001d040270_T003","Zm00001d040270","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//7.31328e-113",35200228,35207787,"-",30100,"downstream"]
["chr5","LNC_003546","XLOC_035696","lncRNA",87537457,87537942,"+","Zm00001d015383_T006","Zm00001d015383","sp|Q9SAJ6|G3PP1_ARATH Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic OS=Arabidopsis thaliana GN=GAPCP1 PE=1 SV=1//6.56556e-24",87519339,87522722,"+",14734,"downstream"]
["chr9","LNC_005724","XLOC_057407","lncRNA",42616713,42616929,"+","Zm00001d045835_T001","Zm00001d045835",null,42523051,42523994,"+",92718,"downstream"]
["chr7","LNC_005069","XLOC_050885","lncRNA",172988151,172988670,"-","Zm00001d022212_T001","Zm00001d022212",null,172912597,172915611,"-",72539,"upstream"]
["chr9","LNC_005876","XLOC_058601","lncRNA",137825161,137832680,"+","Zm00001d047640_T001","Zm00001d047640","sp|B6TPF2|TENA2_MAIZE Bifunctional TENA2 protein OS=Zea mays GN=TENA2 PE=1 SV=1//8.15111e-25",137872908,137874612,"+",40227,"upstream"]
["chr7","LNC_005068","XLOC_050867","lncRNA",172207138,172207413,"-","Zm00001d022184_T001","Zm00001d022184","sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2//8.42042e-35",172171007,172173740,"-",33397,"upstream"]
["chr9","LNC_005873","XLOC_058565","lncRNA",135971947,135972306,"+","Zm00001d047570_T005","Zm00001d047570","sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2//9.38009e-08",135941174,135946433,"+",25513,"downstream"]
["chr9","LNC_005878","XLOC_058662","lncRNA",141033134,141033351,"+","Zm00001d047758_T001","Zm00001d047758","sp|Q10N20|MPK5_ORYSJ Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1//6.63556e-19",141026557,141029594,"-",3539,"upstream"]
["chr4","LNC_003094","XLOC_030787","lncRNA",245448420,245448693,"+","Zm00001d054043_T006","Zm00001d054043","sp|O24581|BIP3_MAIZE Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1//0",245469410,245473141,"+",20716,"upstream"]
["chr4","LNC_003095","XLOC_030788","lncRNA",245451929,245452577,"+","Zm00001d054038_T004","Zm00001d054038","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//4.52573e-25",245456487,245457981,"+",3909,"upstream"]
["chr4","LNC_003095","XLOC_030788","lncRNA",245451929,245452577,"+","Zm00001d054042_T006","Zm00001d054042","sp|Q6ZGM7|YSL7_ORYSJ Probable metal-nicotianamine transporter YSL7 OS=Oryza sativa subsp. japonica GN=YSL7 PE=2 SV=1//0",245465325,245468059,"-",12747,"downstream"]
["chr4","LNC_003090","XLOC_030767","lncRNA",244805318,244806910,"+","Zm00001d053998_T001","Zm00001d053998","sp|Q6Z829|WEE1_ORYSJ Wee1-like protein kinase OS=Oryza sativa subsp. japonica GN=WEE1 PE=3 SV=1//0",244830012,244833977,"-",23101,"downstream"]
["chr4","LNC_003090","XLOC_030767","lncRNA",244805318,244806910,"+","Zm00001d053994_T001","Zm00001d053994","sp|F4IHJ0|SFH8_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1//0",244798741,244803096,"+",2221,"downstream"]
["chr4","LNC_003091","XLOC_030770","lncRNA",244953597,244953910,"+","Zm00001d054003_T050","Zm00001d054003","sp|Q6YXY2|HACL1_ORYSJ Probable histone acetyltransferase HAC-like 1 OS=Oryza sativa subsp. japonica GN=Os02g0137500 PE=3 SV=2//1.42343e-104",244915729,244921584,"-",32012,"upstream"]
["chr4","LNC_003091","XLOC_030770","lncRNA",244953597,244953910,"+","Zm00001d054001_T010","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244881916,244901087,"+",52509,"downstream"]
["chr4","LNC_003092","XLOC_030771","lncRNA",244957408,244957752,"+","Zm00001d054001_T011","Zm00001d054001","sp|Q6YXZ7|ANM5_ORYSJ Protein arginine N-methyltransferase 5 OS=Oryza sativa subsp. japonica GN=PRMT5 PE=2 SV=1//4.87687e-140",244881929,244891163,"+",66244,"downstream"]
["chr4","LNC_003093","XLOC_030786","lncRNA",245446300,245447350,"+","Zm00001d054040_T001","Zm00001d054040",null,245462067,245462140,"-",14716,"downstream"]
["chr1","LNC_000418","XLOC_004557","lncRNA",301543172,301543415,"+","Zm00001d034758_T002","Zm00001d034758","sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1//3.69778e-85",301493011,301499560,"-",43611,"upstream"]
["chr2","LNC_001711","XLOC_016722","lncRNA",223096417,223102136,"+","Zm00001d007139_T004","Zm00001d007139","sp|Q505J9|ATAD1_RAT ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=1 SV=1//2.14476e-47",223189582,223205906,"+",87445,"upstream"]
["chr2","LNC_001713","XLOC_016749","lncRNA",224015026,224019938,"+","Zm00001d007185_T001","Zm00001d007185",null,224106697,224110890,"-",86758,"downstream"]
["chr2","LNC_001712","XLOC_016749","lncRNA",224014706,224019938,"+","Zm00001d007183_T023","Zm00001d007183","sp|Q9LUG9|MD33A_ARATH Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana GN=MED33A PE=1 SV=1//7.05935e-48",224006361,224013496,"+",1209,"downstream"]
["chr2","LNC_001719","XLOC_016842","lncRNA",229157686,229158123,"+","Zm00001d007339_T002","Zm00001d007339","sp|Q7ZZ00|ZN511_DANRE Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1//7.80086e-23",229145502,229148452,"+",9233,"downstream"]
["chr6","LNC_004389","XLOC_044077","lncRNA",45342194,45342488,"-","Zm00001d035751_T004","Zm00001d035751","sp|Q9SRS9|CHIP_ARATH E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1//3.46641e-97",45354992,45356168,"+",12503,"upstream"]
["chr7","LNC_004838","XLOC_048405","lncRNA",171172671,171173082,"+","Zm00001d022144_T001","Zm00001d022144","sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1//3.52419e-10",171127550,171132474,"-",40196,"upstream"]
["chr7","LNC_004837","XLOC_048390","lncRNA",170659673,170659939,"+","Zm00001d022114_T024","Zm00001d022114","sp|Q8BKN5|GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2 SV=2//4.11273e-06",170598363,170604043,"-",55629,"upstream"]
["chr6","LNC_004387","XLOC_044051","lncRNA",41600954,41601309,"-","Zm00001d035700_T012","Zm00001d035700","sp|P14812|SSG2_AVESA 12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1//1.08852e-132",41696515,41698406,"+",95205,"upstream"]
["chr7","LNC_004834","XLOC_048346","lncRNA",168307477,168308121,"+","Zm00001d022028_T010","Zm00001d022028","sp|Q9XGC9|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea mays GN=MUS1 PE=3 SV=1//1.05679e-15",168269121,168278567,"-",28909,"upstream"]
["chr7","LNC_004833","XLOC_048341","lncRNA",167960142,167960354,"+","Zm00001d022010_T004","Zm00001d022010","sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3//4.81889e-08",167905834,167935328,"-",24813,"upstream"]
["chr7","LNC_004832","XLOC_048339","lncRNA",167824196,167825764,"+","Zm00001d021998_T001","Zm00001d021998","sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32 OS=Arabidopsis thaliana GN=SCL32 PE=2 SV=1//1.10529e-154",167723761,167725131,"+",99064,"downstream"]
["chr9","LNC_005838","XLOC_058259","lncRNA",118693965,118698625,"+","Zm00001d047105_T007","Zm00001d047105","sp|Q940Y1|ORP2A_ARATH Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1//4.52726e-20",118775876,118783432,"-",77250,"downstream"]
["chr1","LNC_000442","XLOC_004895","lncRNA",9500332,9504705,"-","Zm00001d027628_T001","Zm00001d027628","sp|F4IPY2|SYCM_ARATH Cysteine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SYCO PE=2 SV=1//8.66453e-09",9479223,9480967,"-",19364,"upstream"]
["chr1","LNC_000440","XLOC_004895","lncRNA",9500332,9504704,"-","Zm00001d027633_T011","Zm00001d027633","sp|Q5S2C3|PIR_ARATH Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2//1.01452e-98",9547625,9612900,"+",42920,"upstream"]
["chr1","LNC_000441","XLOC_004895","lncRNA",9500332,9504705,"-","Zm00001d027631_T001","Zm00001d027631",null,9497951,9498772,"-",1559,"upstream"]
["chr1","LNC_000446","XLOC_004941","lncRNA",11529170,11529475,"-","Zm00001d027707_T003","Zm00001d027707","sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1//6.54676e-06",11591211,11594268,"-",61735,"downstream"]
["chr1","LNC_000444","XLOC_004895","lncRNA",9500332,9504705,"-","Zm00001d027630_T004","Zm00001d027630",null,9488584,9492125,"+",8206,"downstream"]
["chr8","LNC_005260","XLOC_052623","lncRNA",109171027,109171284,"+","Zm00001d010309_T005","Zm00001d010309","sp|Q6I576|SPL9_ORYSJ Squamosa promoter-binding-like protein 9 OS=Oryza sativa subsp. japonica GN=SPL9 PE=2 SV=1//8.84767e-13",109067495,109086927,"+",84099,"downstream"]
["chr8","LNC_005266","XLOC_052682","lncRNA",114281919,114282830,"+","Zm00001d010420_T001","Zm00001d010420",null,114332704,114333342,"-",49873,"downstream"]
["chrMt","LNC_006265","XLOC_062152","lncRNA",143711,145570,"+","GRMZM5G882520_T01","GRMZM5G882520",null,224213,225121,"-",78642,"downstream"]
["chr4","LNC_002962","XLOC_029207","lncRNA",148656080,148656436,"+","Zm00001d051211_T027","Zm00001d051211","sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1//3.40862e-06",148727915,148733393,"+",71478,"upstream"]
["chr4","LNC_002964","XLOC_029240","lncRNA",151324063,151325075,"+","Zm00001d051268_T003","Zm00001d051268","sp|Q6H7S2|RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2//4.09492e-07",151295202,151303001,"+",21061,"downstream"]
["chr4","LNC_002969","XLOC_029287","lncRNA",155193628,155193945,"+","Zm00001d051345_T006","Zm00001d051345","sp|C0LT23|CERK_ORYSJ Ceramide kinase OS=Oryza sativa subsp. japonica GN=CERK PE=1 SV=1//1.92261e-30",155274030,155299973,"-",80084,"downstream"]
["chr2","LNC_001921","XLOC_018819","lncRNA",105312906,105314360,"-","Zm00001d004347_T002","Zm00001d004347","sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1 OS=Danio rerio GN=pif1 PE=2 SV=1//4.18471e-19",105338666,105343830,"-",24305,"downstream"]
["chr2","LNC_001929","XLOC_018913","lncRNA",113638658,113639206,"-","Zm00001d004463_T013","Zm00001d004463","sp|Q9M8Z7|U80A2_ARATH Sterol 3-beta-glucosyltransferase UGT80A2 OS=Arabidopsis thaliana GN=UGT80A2 PE=1 SV=1//2.96164e-07",113537802,113567649,"+",71008,"downstream"]
["chr1","LNC_000039","XLOC_000602","lncRNA",28174031,28174472,"+","Zm00001d028255_T008","Zm00001d028255",null,28066600,28076457,"+",97573,"downstream"]
["chr1","LNC_000030","XLOC_000470","lncRNA",22120855,22121692,"+","Zm00001d028075_T009","Zm00001d028075","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//4.71952e-173",22053668,22070075,"-",50779,"upstream"]
["chr1","LNC_000030","XLOC_000470","lncRNA",22120855,22121692,"+","Zm00001d028075_T023","Zm00001d028075","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//4.71952e-173",22053697,22058189,"-",62665,"upstream"]
["chr1","LNC_000036","XLOC_000588","lncRNA",27317070,27317295,"+","Zm00001d028232_T003","Zm00001d028232","sp|O49044|SODC2_MESCR Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1//5.38473e-35",27413617,27420137,"-",96321,"downstream"]
["chr1","LNC_000035","XLOC_000548","lncRNA",26422525,26422957,"+","Zm00001d028208_T035","Zm00001d028208","sp|Q32SG5|RIK_MAIZE Protein RIK OS=Zea mays PE=1 SV=1//2.29423e-27",26428542,26434725,"+",5584,"upstream"]
["chr1","LNC_000034","XLOC_000530","lncRNA",25612848,25613105,"+","Zm00001d028177_T007","Zm00001d028177","sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. indica GN=UBP26 PE=3 SV=1//3.19583e-24",25545585,25563610,"-",49237,"upstream"]
["chr7","LNC_004609","XLOC_046305","lncRNA",7749130,7756425,"+","Zm00001d018863_T002","Zm00001d018863","sp|Q9C5Q8|HEN1_ARATH Small RNA 2&apos;-O-methyltransferase OS=Arabidopsis thaliana GN=HEN1 PE=1 SV=1//1.08016e-61",7668475,7673706,"-",75423,"upstream"]
["chr7","LNC_004604","XLOC_046305","lncRNA",7749085,7756425,"+","Zm00001d018867_T002","Zm00001d018867","sp|Q8VZU2|SY132_ARATH Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1//5.88186e-103",7839802,7844665,"-",83376,"downstream"]
["chr7","LNC_004606","XLOC_046305","lncRNA",7749112,7756425,"+","Zm00001d018862_T001","Zm00001d018862","sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1//1.95494e-151",7665335,7667248,"-",81863,"upstream"]
["chr2","LNC_001540","XLOC_014989","lncRNA",98024929,98025909,"+","Zm00001d004265_T001","Zm00001d004265",null,98032713,98032786,"-",6803,"downstream"]
["chr2","LNC_001546","XLOC_015018","lncRNA",102115513,102116146,"+","Zm00001d004308_T001","Zm00001d004308","sp|Q7XRH8|PT113_ORYSJ Putative inorganic phosphate transporter 1-13 OS=Oryza sativa subsp. japonica GN=PHT1-13 PE=3 SV=2//0",102151298,102152936,"-",35151,"downstream"]
["chr8","LNC_005475","XLOC_054848","lncRNA",67435949,67436375,"-","Zm00001d009499_T001","Zm00001d009499",null,67488186,67488257,"+",51810,"upstream"]
["chr3","LNC_002361","XLOC_023369","lncRNA",190178118,190178410,"+","Zm00001d043144_T001","Zm00001d043144","sp|Q40642|CML1_ORYSI Calmodulin-like protein 1 OS=Oryza sativa subsp. indica GN=CML1 PE=1 SV=1//5.42187e-90",190100184,190103976,"-",74141,"upstream"]
["chr3","LNC_002360","XLOC_023347","lncRNA",189393505,189393767,"+","Zm00001d043110_T015","Zm00001d043110","sp|Q5JK35|BGL05_ORYSJ Beta-glucosidase 5 OS=Oryza sativa subsp. japonica GN=BGLU5 PE=2 SV=1//2.74413e-06",189417333,189421190,"+",23565,"upstream"]
["chr3","LNC_002366","XLOC_023421","lncRNA",192379771,192380124,"+","Zm00001d043227_T003","Zm00001d043227","sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1//1.14322e-146",192433297,192435053,"-",53172,"downstream"]
["chr3","LNC_002366","XLOC_023421","lncRNA",192379771,192380124,"+","Zm00001d043225_T001","Zm00001d043225","sp|Q8LE47|PPR87_ARATH Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2//3.83589e-97",192392374,192393555,"-",12249,"downstream"]
["chr4","LNC_003375","XLOC_033718","lncRNA",226331371,226334362,"-","Zm00001d053329_T001","Zm00001d053329",null,226395349,226396012,"-",60986,"downstream"]
["chr1","LNC_000632","XLOC_006738","lncRNA",159395623,159396062,"-","Zm00001d030782_T003","Zm00001d030782","sp|Q7XWS7|FH12_ORYSJ Formin-like protein 12 OS=Oryza sativa subsp. japonica GN=FH12 PE=3 SV=3//1.66686e-62",159426414,159429033,"-",30351,"downstream"]
["chr4","LNC_002778","XLOC_027624","lncRNA",4535311,4535706,"+","Zm00001d048737_T001","Zm00001d048737",null,4611295,4613053,"-",75588,"downstream"]
["chr4","LNC_002779","XLOC_027627","lncRNA",4756490,4756789,"+","Zm00001d048741_T001","Zm00001d048741","sp|Q8L748|NU107_ARATH Nuclear pore complex protein NUP107 OS=Arabidopsis thaliana GN=NUP107 PE=1 SV=1//1.1006e-49",4796507,4808319,"+",39717,"upstream"]
["chr4","LNC_002779","XLOC_027627","lncRNA",4756490,4756789,"+","Zm00001d048741_T120","Zm00001d048741","sp|Q8L748|NU107_ARATH Nuclear pore complex protein NUP107 OS=Arabidopsis thaliana GN=NUP107 PE=1 SV=1//1.1006e-49",4809180,4820929,"+",52390,"upstream"]
["chr4","LNC_002776","XLOC_027622","lncRNA",4526810,4528783,"+","Zm00001d048734_T008","Zm00001d048734",null,4476514,4484461,"+",42348,"downstream"]
["chr4","LNC_002777","XLOC_027622","lncRNA",4526810,4530238,"+","Zm00001d048734_T012","Zm00001d048734",null,4477835,4484465,"+",42344,"downstream"]
["chr4","LNC_002774","XLOC_027622","lncRNA",4526808,4527925,"+","Zm00001d048731_T007","Zm00001d048731","sp|Q07970|ATK1_ARATH Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1//2.36983e-47",4464931,4469275,"+",57532,"downstream"]
["chr4","LNC_002775","XLOC_027622","lncRNA",4526808,4528783,"+","Zm00001d048732_T005","Zm00001d048732","sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana GN=NHX2 PE=2 SV=2//5.3369e-24",4470001,4475393,"+",51414,"downstream"]
["chr6","LNC_004037","XLOC_040979","lncRNA",1581486,1582507,"+","Zm00001d035004_T029","Zm00001d035004","sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1//3.08978e-59",1572259,1578809,"+",2676,"downstream"]
["chr6","LNC_004037","XLOC_040979","lncRNA",1581486,1582507,"+","Zm00001d035004_T034","Zm00001d035004","sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1//3.08978e-59",1572540,1578602,"+",2883,"downstream"]
["chr6","LNC_004039","XLOC_041031","lncRNA",4754875,4755109,"+","Zm00001d035090_T003","Zm00001d035090","sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1//3.07002e-14",4849004,4853228,"-",93894,"downstream"]
["chr6","LNC_004038","XLOC_040980","lncRNA",1584784,1585117,"+","Zm00001d035004_T026","Zm00001d035004","sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1//3.08978e-59",1571297,1578471,"+",6312,"downstream"]
["chr3","LNC_002175","XLOC_021668","lncRNA",47453407,47466025,"+","Zm00001d040508_T001","Zm00001d040508","sp|P20364|TBB1_DAUCA Tubulin beta-1 chain (Fragment) OS=Daucus carota GN=TUBB1 PE=1 SV=2//2.8089e-35",47519975,47520226,"-",53949,"downstream"]
["chr3","LNC_002177","XLOC_021707","lncRNA",50831855,50832107,"+","Zm00001d040571_T011","Zm00001d040571","sp|Q9LGU7|SPL1_ORYSJ Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1//9.02587e-44",50764135,50771754,"+",60100,"downstream"]
["chr3","LNC_002173","XLOC_021668","lncRNA",47453357,47466025,"+","Zm00001d040507_T001","Zm00001d040507",null,47408698,47409472,"+",43884,"downstream"]
["chr5","LNC_003561","XLOC_035878","lncRNA",100756641,100756844,"+","Zm00001d015602_T001","Zm00001d015602","sp|A4PBL4|RAD54_ORYSJ DNA repair and recombination protein RAD54 OS=Oryza sativa subsp. japonica GN=RAD54 PE=1 SV=1//2.99816e-21",100704526,100706401,"+",50239,"downstream"]
["chr10","LNC_000996","XLOC_010172","lncRNA",94249613,94250188,"+","Zm00001d024908_T004","Zm00001d024908","sp|B8AU84|ARGI1_ORYSI Arginase 1, mitochondrial OS=Oryza sativa subsp. indica GN=B0616E02-H0507E05.7 PE=1 SV=1//3.0273e-17",94274271,94278590,"-",24082,"downstream"]
["chr3","LNC_002288","XLOC_022650","lncRNA",146386364,146388954,"+","Zm00001d041977_T001","Zm00001d041977","sp|Q9ZRT5|GSTT1_ARATH Glutathione S-transferase T1 OS=Arabidopsis thaliana GN=GSTT1 PE=2 SV=1//8.66628e-65",146369021,146370053,"-",16310,"upstream"]
["chr3","LNC_002284","XLOC_022610","lncRNA",144221012,144223659,"+","Zm00001d041932_T010","Zm00001d041932","sp|O75691|UTP20_HUMAN Small subunit processome component 20 homolog OS=Homo sapiens GN=UTP20 PE=1 SV=3//2.88062e-43",144149622,144159704,"-",61307,"upstream"]
["chr1","LNC_000404","XLOC_004344","lncRNA",291510299,291510884,"+","Zm00001d023012_T001","Zm00001d023012",null,291596023,291596891,"+",85138,"upstream"]
["chr1","LNC_000402","XLOC_004326","lncRNA",290742827,290743122,"+","Zm00001d034360_T001","Zm00001d034360","sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP PE=3 SV=1//5.28305e-06",290672852,290677815,"-",65011,"upstream"]
["chr9","LNC_005814","XLOC_058043","lncRNA",103457051,103457313,"+","Zm00001d046722_T005","Zm00001d046722","sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3//3.82456e-50",103540090,103559119,"+",82776,"upstream"]
["chr9","LNC_005815","XLOC_058052","lncRNA",103928007,103928309,"+","Zm00001d046740_T001","Zm00001d046740","sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica GN=Os06g0618100 PE=2 SV=1//5.89299e-111",103969348,103972198,"+",41038,"upstream"]
["chr9","LNC_005813","XLOC_058031","lncRNA",103014282,103014580,"+","Zm00001d046707_T003","Zm00001d046707",null,103033153,103035711,"+",18572,"upstream"]
["chr2","LNC_001738","XLOC_017143","lncRNA",242020799,242021105,"+","Zm00001d007897_T009","Zm00001d007897","sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1//7.74806e-26",241928137,241932627,"+",88171,"downstream"]
["chr2","LNC_001737","XLOC_017125","lncRNA",241319019,241319602,"+","Zm00001d007867_T001","Zm00001d007867",null,241310570,241312431,"+",6587,"downstream"]
["chr2","LNC_001731","XLOC_017055","lncRNA",238253594,238253921,"+","Zm00001d007729_T001","Zm00001d007729","sp|O80594|ERG28_ARATH Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana GN=At1g10030 PE=2 SV=2//2.37182e-39",238305607,238306483,"+",51685,"upstream"]
["chr2","LNC_001731","XLOC_017055","lncRNA",238253594,238253921,"+","Zm00001d007719_T031","Zm00001d007719","sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana GN=RH40 PE=2 SV=1//1.73856e-14",238192004,238198766,"+",54827,"downstream"]
["chr1","LNC_000468","XLOC_005105","lncRNA",20414026,20414393,"-","Zm00001d028019_T001","Zm00001d028019","sp|P52711|CBP23_HORVU Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1//2.79729e-131",20429324,20431994,"+",14930,"upstream"]
["chr8","LNC_005104","XLOC_051247","lncRNA",5200208,5201505,"+","Zm00001d008321_T008","Zm00001d008321","sp|Q5R4M2|ULK4_PONAB Serine/threonine-protein kinase ULK4 OS=Pongo abelii GN=ULK4 PE=2 SV=1//2.87797e-41",5116405,5133112,"+",67095,"downstream"]
["chr8","LNC_005105","XLOC_051247","lncRNA",5200208,5206336,"+","Zm00001d008321_T006","Zm00001d008321","sp|Q5R4M2|ULK4_PONAB Serine/threonine-protein kinase ULK4 OS=Pongo abelii GN=ULK4 PE=2 SV=1//2.87797e-41",5116258,5134191,"+",66016,"downstream"]
["chr8","LNC_005105","XLOC_051247","lncRNA",5200208,5206336,"+","Zm00001d008321_T019","Zm00001d008321","sp|Q5R4M2|ULK4_PONAB Serine/threonine-protein kinase ULK4 OS=Pongo abelii GN=ULK4 PE=2 SV=1//2.87797e-41",5116519,5133089,"+",67118,"downstream"]
["chr1","LNC_000461","XLOC_005065","lncRNA",18686444,18686739,"-","Zm00001d027969_T005","Zm00001d027969",null,18597035,18617718,"+",68725,"downstream"]
["chr8","LNC_005102","XLOC_051213","lncRNA",4785551,4791905,"+","Zm00001d008312_T001","Zm00001d008312",null,4855211,4857885,"-",63305,"downstream"]
["chr8","LNC_005249","XLOC_052519","lncRNA",103367462,103367988,"+","Zm00001d010180_T002","Zm00001d010180","sp|Q8DI01|FABZ_THEEB 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Thermosynechococcus elongatus (strain BP-1) GN=fabZ PE=3 SV=1//1.54584e-48",103282289,103285386,"-",82075,"upstream"]
["chr8","LNC_005245","XLOC_052459","lncRNA",99103508,99105363,"+","Zm00001d010093_T001","Zm00001d010093","sp|Q9SYM2|BBX22_ARATH B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2//2.00502e-09",99085952,99087440,"+",16067,"downstream"]
["chr4","LNC_002909","XLOC_028824","lncRNA",104299248,104300132,"+","Zm00001d050612_T009","Zm00001d050612","sp|Q9SL02|RAD50_ARATH DNA repair protein RAD50 OS=Arabidopsis thaliana GN=RAD50 PE=1 SV=2//3.98469e-13",104339210,104370230,"+",39077,"upstream"]
["chr1","LNC_000058","XLOC_000785","lncRNA",38929312,38929519,"+","Zm00001d028546_T021","Zm00001d028546",null,38903075,38914734,"+",14577,"downstream"]
["chr1","LNC_000057","XLOC_000756","lncRNA",37308058,37308379,"+","Zm00001d028505_T001","Zm00001d028505","sp|Q9XG81|PLA22_ORYSJ Probable phospholipase A2 homolog 2 OS=Oryza sativa subsp. japonica GN=PLA2-II PE=1 SV=1//2.89629e-73",37343077,37345202,"+",34697,"upstream"]
["chr1","LNC_000053","XLOC_000710","lncRNA",34786382,34786701,"+","Zm00001d028429_T019","Zm00001d028429","sp|Q8LE10|HA22I_ARATH HVA22-like protein i OS=Arabidopsis thaliana GN=HVA22I PE=2 SV=2//1.73979e-44",34709747,34711654,"-",74727,"upstream"]
["chr1","LNC_000053","XLOC_000710","lncRNA",34786382,34786701,"+","Zm00001d028429_T006","Zm00001d028429","sp|Q8LE10|HA22I_ARATH HVA22-like protein i OS=Arabidopsis thaliana GN=HVA22I PE=2 SV=2//1.73979e-44",34709569,34713166,"-",73215,"upstream"]
["chr6","LNC_004191","XLOC_042314","lncRNA",111635869,111636144,"+","Zm00001d037084_T001","Zm00001d037084","sp|Q68CZ6|HAUS3_HUMAN HAUS augmin-like complex subunit 3 OS=Homo sapiens GN=HAUS3 PE=1 SV=1//1.52748e-10",111695535,111708346,"+",59390,"upstream"]
["chr6","LNC_004192","XLOC_042324","lncRNA",112131424,112131666,"+","Zm00001d037099_T019","Zm00001d037099","sp|Q94A27|SAC2_ARATH Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana GN=SAC2 PE=2 SV=1//2.8889e-14",112114960,112122531,"-",8892,"upstream"]
["chr6","LNC_004193","XLOC_042326","lncRNA",112315966,112316255,"+","Zm00001d037100_T101","Zm00001d037100","sp|Q569Z2|XPO7B_XENLA Exportin-7-B OS=Xenopus laevis GN=xpo7-b PE=2 SV=1//2.85857e-21",112268964,112277038,"+",38927,"downstream"]
["chr6","LNC_004193","XLOC_042326","lncRNA",112315966,112316255,"+","Zm00001d037104_T001","Zm00001d037104","sp|Q8S904|MFDX2_ARATH Adrenodoxin-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=MFDX2 PE=2 SV=1//1.66981e-68",112382299,112384437,"-",66043,"downstream"]
["chr6","LNC_004194","XLOC_042330","lncRNA",112462436,112462739,"+","Zm00001d037108_T001","Zm00001d037108","sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1//1.18318e-56",112471489,112475747,"-",8749,"downstream"]
["chr6","LNC_004197","XLOC_042350","lncRNA",113661269,113661797,"+","Zm00001d037140_T002","Zm00001d037140","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//0",113744470,113747386,"-",82672,"downstream"]
["chr2","LNC_001904","XLOC_018731","lncRNA",93973648,93973978,"-","Zm00001d004231_T001","Zm00001d004231",null,94071356,94072171,"-",97377,"downstream"]
["chr3","LNC_002342","XLOC_023141","lncRNA",179375493,179376150,"+","Zm00001d042783_T001","Zm00001d042783",null,179463922,179464532,"+",87771,"upstream"]
["chr3","LNC_002340","XLOC_023122","lncRNA",178797600,178798117,"+","Zm00001d042746_T001","Zm00001d042746","sp|P34799|URIC2_CANLI Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1//2.26908e-06",178829494,178833019,"+",31376,"upstream"]
["chr3","LNC_002344","XLOC_023170","lncRNA",181193766,181194130,"+","Zm00001d042825_T001","Zm00001d042825","sp|Q5SVZ6|ZMYM1_HUMAN Zinc finger MYM-type protein 1 OS=Homo sapiens GN=ZMYM1 PE=2 SV=1//8.38606e-19",181156625,181159543,"-",34222,"upstream"]
["chr3","LNC_002349","XLOC_023243","lncRNA",184588291,184588711,"+","Zm00001d042940_T001","Zm00001d042940",null,184600405,184602349,"-",11693,"downstream"]
["chr4","LNC_003350","XLOC_033442","lncRNA",203555333,203574670,"-","Zm00001d052888_T017","Zm00001d052888","sp|Q9DDY9|PAB2A_XENLA Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-a PE=2 SV=1//1.82963e-06",203494772,203511261,"+",44071,"downstream"]
["chr4","LNC_003355","XLOC_033526","lncRNA",207996556,207997154,"-","Zm00001d052992_T002","Zm00001d052992","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//5.30438e-08",207905668,207929234,"-",67321,"upstream"]
["chr1","LNC_000077","XLOC_001154","lncRNA",59663821,59664081,"+","Zm00001d029133_T005","Zm00001d029133","sp|Q10LJ0|NCBP1_ORYSJ Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp. japonica GN=ABH1 PE=2 SV=1//1.26461e-16",59759933,59786192,"+",95851,"upstream"]
["chr1","LNC_000074","XLOC_001079","lncRNA",54410850,54411138,"+","Zm00001d029004_T021","Zm00001d029004","sp|Q8SAB7|SPK1_ARATH Guanine nucleotide exchange factor SPIKE 1 OS=Arabidopsis thaliana GN=SPK1 PE=1 SV=1//0",54451981,54484683,"+",40842,"upstream"]
["chr1","LNC_000073","XLOC_001073","lncRNA",53777532,53777875,"+","Zm00001d028987_T004","Zm00001d028987","sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=2 SV=1//0",53748837,53752964,"-",24567,"upstream"]
["chr1","LNC_000071","XLOC_001031","lncRNA",51693754,51694004,"+","Zm00001d028926_T026","Zm00001d028926","sp|Q10MC0|NIN1_ORYSJ Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=NIN1 PE=1 SV=1//0",51760721,51764538,"-",66716,"downstream"]
["chr3","LNC_002750","XLOC_027349","lncRNA",226456996,226457354,"-","Zm00001d044380_T001","Zm00001d044380","sp|P0C1M0|ATPG_MAIZE ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1//1.92688e-10",226483219,226483716,"-",25864,"downstream"]
["chr3","LNC_002751","XLOC_027375","lncRNA",227843551,227843820,"-","Zm00001d044429_T002","Zm00001d044429",null,227740771,227744627,"+",98923,"downstream"]
["chr3","LNC_002752","XLOC_027394","lncRNA",228854784,228855009,"-","Zm00001d044463_T001","Zm00001d044463","sp|Q704V3|LOL5_ORYSJ Protein LOL5 OS=Oryza sativa subsp. japonica GN=LOL5 PE=2 SV=1//1.33008e-29",228864394,228874585,"+",9384,"upstream"]
["chr3","LNC_002754","XLOC_027399","lncRNA",229029190,229029452,"-","Zm00001d044469_T006","Zm00001d044469","sp|Q9LKA4|UBA2C_ARATH UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1//1.45687e-68",229010530,229015033,"-",14156,"upstream"]
["chr3","LNC_002755","XLOC_027408","lncRNA",229355797,229356021,"-","Zm00001d044478_T015","Zm00001d044478","sp|Q8CFE4|SCYL2_MOUSE SCY1-like protein 2 OS=Mus musculus GN=Scyl2 PE=1 SV=1//2.28739e-06",229247909,229255973,"+",99823,"downstream"]
["chr3","LNC_002755","XLOC_027408","lncRNA",229355797,229356021,"-","Zm00001d044478_T059","Zm00001d044478","sp|Q8CFE4|SCYL2_MOUSE SCY1-like protein 2 OS=Mus musculus GN=Scyl2 PE=1 SV=1//2.28739e-06",229248389,229256010,"+",99786,"downstream"]
["chr3","LNC_002757","XLOC_027422","lncRNA",229954982,229956250,"-","Zm00001d044503_T012","Zm00001d044503","sp|P28724|DHE4_GIAIN NADP-specific glutamate dehydrogenase OS=Giardia intestinalis PE=2 SV=1//8.43099e-58",230007467,230012636,"-",51216,"downstream"]
["chr3","LNC_002758","XLOC_027427","lncRNA",230439378,230440136,"-","Zm00001d044510_T026","Zm00001d044510","sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2 SV=2//3.64592e-12",230393147,230398442,"+",40935,"downstream"]
["chr7","LNC_004979","XLOC_049797","lncRNA",110134563,110135099,"-","Zm00001d020378_T001","Zm00001d020378","sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9 OS=Arabidopsis thaliana GN=IP5P9 PE=1 SV=1//9.16422e-42",110059148,110061879,"-",72683,"upstream"]
["chr7","LNC_004976","XLOC_049767","lncRNA",107096991,107097253,"-","Zm00001d020332_T001","Zm00001d020332","sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19 PE=2 SV=1//8.20032e-109",107145738,107147834,"+",48484,"upstream"]
["chr10","LNC_001227","XLOC_012152","lncRNA",81458558,81464122,"-","Zm00001d024635_T003","Zm00001d024635","sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2//5.75088e-108",81355519,81359449,"-",99108,"upstream"]
["chr10","LNC_001228","XLOC_012153","lncRNA",81466705,81466969,"-","Zm00001d024640_T003","Zm00001d024640","sp|P49307|MOCA_RHIML Rhizopine catabolism protein MocA OS=Rhizobium meliloti GN=mocA PE=3 SV=1//3.11491e-15",81524721,81534673,"+",57751,"upstream"]
["chr5","LNC_003998","XLOC_040594","lncRNA",210280395,210288867,"-","Zm00001d017932_T003","Zm00001d017932","sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2//2.68806e-113",210273759,210285475,"+",-5081,"antisense"]
["chr5","LNC_003998","XLOC_040594","lncRNA",210280395,210288867,"-","Zm00001d017930_T007","Zm00001d017930","sp|O22793|MORF2_ARATH Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana GN=MORF2 PE=1 SV=1//1.47682e-12",210256401,210262368,"+",18026,"downstream"]
["chr5","LNC_003990","XLOC_040590","lncRNA",210100694,210101166,"-","Zm00001d017913_T001","Zm00001d017913","sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1//0",210045106,210049062,"-",51631,"upstream"]
["chr5","LNC_003993","XLOC_040594","lncRNA",210280395,210288735,"-","Zm00001d017935_T001","Zm00001d017935","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//2.66827e-06",210378851,210382733,"+",90115,"upstream"]
["chr5","LNC_003992","XLOC_040594","lncRNA",210280395,210288396,"-","Zm00001d017926_T012","Zm00001d017926",null,210203025,210207160,"+",73234,"downstream"]
["chr5","LNC_003995","XLOC_040594","lncRNA",210280395,210288863,"-","Zm00001d017926_T009","Zm00001d017926",null,210202941,210207366,"+",73028,"downstream"]
["chr5","LNC_003995","XLOC_040594","lncRNA",210280395,210288863,"-","Zm00001d017925_T003","Zm00001d017925","sp|Q6YWQ4|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1//3.24168e-144",210190150,210195309,"+",85085,"downstream"]
["chr5","LNC_003997","XLOC_040594","lncRNA",210280395,210288865,"-","Zm00001d017926_T006","Zm00001d017926",null,210202941,210207299,"+",73095,"downstream"]
["chr5","LNC_003997","XLOC_040594","lncRNA",210280395,210288865,"-","Zm00001d017926_T013","Zm00001d017926",null,210203298,210207160,"+",73234,"downstream"]
["chr5","LNC_003996","XLOC_040594","lncRNA",210280395,210288863,"-","Zm00001d017925_T001","Zm00001d017925","sp|Q6YWQ4|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1//3.24168e-144",210190144,210195024,"+",85370,"downstream"]
["chr3","LNC_002118","XLOC_021103","lncRNA",6891052,6891370,"+","zma-mir156b","zma-MIR156b",null,6928278,6928401,"-",36907,"downstream"]
["chr3","LNC_002113","XLOC_021028","lncRNA",3324701,3324997,"+","Zm00001d039400_T003","Zm00001d039400","sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens GN=CNOT4 PE=1 SV=3//5.16685e-38",3413511,3425991,"+",88513,"upstream"]
["chr3","LNC_002110","XLOC_021014","lncRNA",2920703,2927290,"+","Zm00001d039380_T012","Zm00001d039380","sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SYNO PE=2 SV=3//1.00976e-12",2951196,2959742,"-",23905,"downstream"]
["chr5","LNC_003507","XLOC_035225","lncRNA",52785543,52785923,"+","Zm00001d014547_T001","Zm00001d014547",null,52711563,52712093,"-",73449,"upstream"]
["chr5","LNC_003501","XLOC_035176","lncRNA",49437317,49438031,"+","Zm00001d014472_T003","Zm00001d014472","sp|Q6H7U2|C3H13_ORYSJ Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=Os02g0161200 PE=2 SV=1//3.18078e-47",49398176,49404019,"-",33297,"upstream"]
["chr9","LNC_005831","XLOC_058202","lncRNA",114866908,114868579,"+","Zm00001d046999_T001","Zm00001d046999",null,114864891,114868937,"-",-1672,"antisense"]
["chr9","LNC_005834","XLOC_058206","lncRNA",115033156,115041749,"+","Zm00001d047003_T002","Zm00001d047003",null,114946402,114947166,"-",85989,"upstream"]
["chr6","LNC_004410","XLOC_044219","lncRNA",58380374,58380583,"-","Zm00001d035887_T014","Zm00001d035887","sp|F4JQZ3|REN1_ARATH Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana GN=REN1 PE=1 SV=2//6.2843e-08",58469334,58480487,"+",88750,"upstream"]
["chr6","LNC_004416","XLOC_044260","lncRNA",62952894,62953128,"-","Zm00001d035963_T001","Zm00001d035963",null,62958250,62958990,"-",5121,"downstream"]
["chr9","LNC_006123","XLOC_060842","lncRNA",131566817,131572166,"-","Zm00001d047481_T006","Zm00001d047481","sp|Q9MAB3|NOP5B_ARATH Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1//2.20265e-08",131630342,131634212,"+",58175,"upstream"]
["chr9","LNC_006120","XLOC_060779","lncRNA",128584913,128585177,"-","Zm00001d047395_T003","Zm00001d047395","sp|Q8CIK8|RFWD3_MOUSE E3 ubiquitin-protein ligase RFWD3 OS=Mus musculus GN=Rfwd3 PE=2 SV=1//1.10461e-08",128653903,128657305,"-",68725,"downstream"]
["chr9","LNC_006127","XLOC_060852","lncRNA",132490221,132492149,"-","Zm00001d047494_T064","Zm00001d047494","sp|P28737|MSP1_YEAST Protein MSP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSP1 PE=1 SV=2//2.86948e-21",132520039,132525430,"+",27889,"upstream"]
["chr9","LNC_006126","XLOC_060850","lncRNA",132469282,132469689,"-","Zm00001d047494_T002","Zm00001d047494","sp|P28737|MSP1_YEAST Protein MSP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSP1 PE=1 SV=2//2.86948e-21",132492626,132524890,"+",22936,"upstream"]
["chr9","LNC_006124","XLOC_060842","lncRNA",131566817,131572175,"-","Zm00001d047479_T003","Zm00001d047479","sp|P23346|SODC5_MAIZE Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2//2.46047e-07",131494599,131498134,"-",68682,"upstream"]
["chr1","LNC_000407","XLOC_004359","lncRNA",292086997,292087235,"+","Zm00001d034406_T007","Zm00001d034406","sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1//2.49966e-21",292049545,292053087,"+",33909,"downstream"]
["chr1","LNC_000407","XLOC_004359","lncRNA",292086997,292087235,"+","Zm00001d034405_T002","Zm00001d034405","sp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1//0",292041509,292045751,"-",41245,"upstream"]
["chr5","LNC_003698","XLOC_037329","lncRNA",212316057,212316474,"+","Zm00001d018021_T001","Zm00001d018021","sp|P30792|PMGI_MAIZE 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1//7.51922e-128",212222951,212224144,"-",91912,"upstream"]
["chr5","LNC_003699","XLOC_037347","lncRNA",212820974,212823760,"+","Zm00001d018046_T002","Zm00001d018046","sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1//2.2914e-37",212798586,212804009,"+",16964,"downstream"]
["chr5","LNC_003694","XLOC_037275","lncRNA",210129272,210129563,"+","Zm00001d017925_T013","Zm00001d017925","sp|Q6YWQ4|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1//3.24168e-144",210190572,210194964,"+",61008,"upstream"]
["chr5","LNC_003695","XLOC_037282","lncRNA",210322857,210323061,"+","Zm00001d017937_T004","Zm00001d017937","sp|Q94AG6|SAMC1_ARATH S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SAMC1 PE=1 SV=1//1.54441e-131",210385412,210389189,"-",62350,"downstream"]
["chr5","LNC_003695","XLOC_037282","lncRNA",210322857,210323061,"+","Zm00001d017935_T002","Zm00001d017935","sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1//2.66827e-06",210378851,210382733,"+",55789,"upstream"]
["chr5","LNC_003691","XLOC_037260","lncRNA",209950098,209970549,"+","Zm00001d017912_T001","Zm00001d017912","sp|Q6YWS8|ASCL2_ORYSJ ASC1-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0728300 PE=3 SV=2//1.07924e-134",210036826,210039426,"+",66276,"upstream"]
["chr8","LNC_005228","XLOC_052311","lncRNA",86299966,86300200,"+","Zm00001d009870_T014","Zm00001d009870","sp|O64937|EF1A_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2//0",86259332,86260115,"+",39850,"downstream"]
["chr8","LNC_005221","XLOC_052254","lncRNA",81333426,81333691,"+","Zm00001d009789_T006","Zm00001d009789","sp|Q9SSG5|BOR5_ARATH Putative boron transporter 5 OS=Arabidopsis thaliana GN=BOR5 PE=3 SV=1//1.26257e-17",81398779,81405752,"+",65087,"upstream"]
["chr8","LNC_005223","XLOC_052256","lncRNA",81346575,81346988,"+","Zm00001d009789_T011","Zm00001d009789","sp|Q9SSG5|BOR5_ARATH Putative boron transporter 5 OS=Arabidopsis thaliana GN=BOR5 PE=3 SV=1//1.26257e-17",81401716,81404317,"+",54727,"upstream"]
["chr4","LNC_002929","XLOC_028916","lncRNA",120393997,120394312,"+","Zm00001d050741_T008","Zm00001d050741","sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1//1.29638e-33",120378609,120385577,"-",8419,"upstream"]
["chr8","LNC_005596","XLOC_055860","lncRNA",146611074,146611380,"-","Zm00001d011315_T029","Zm00001d011315","sp|Q0JLC5|AB36G_ORYSJ ABC transporter G family member 36 OS=Oryza sativa subsp. japonica GN=ABCG36 PE=2 SV=1//0",146513212,146520328,"-",90745,"upstream"]
["chr8","LNC_005596","XLOC_055860","lncRNA",146611074,146611380,"-","Zm00001d011315_T012","Zm00001d011315","sp|Q0JLC5|AB36G_ORYSJ ABC transporter G family member 36 OS=Oryza sativa subsp. japonica GN=ABCG36 PE=2 SV=1//0",146513212,146520303,"-",90770,"upstream"]
["chr8","LNC_005590","XLOC_055763","lncRNA",139265760,139266076,"-","Zm00001d011110_T001","Zm00001d011110",null,139269871,139272723,"+",3794,"upstream"]
["chr6","LNC_004172","XLOC_042100","lncRNA",98466852,98467334,"+","Zm00001d036714_T001","Zm00001d036714","sp|Q67UQ7|MRS2B_ORYSJ Magnesium transporter MRS2-B OS=Oryza sativa subsp. japonica GN=MRS2-B PE=2 SV=1//0",98440958,98444404,"+",22447,"downstream"]
["chr6","LNC_004176","XLOC_042150","lncRNA",100893668,100893942,"+","Zm00001d001404_T001","Zm00001d001404",null,100932241,100933070,"+",38298,"upstream"]
["chr6","LNC_004174","XLOC_042130","lncRNA",100115275,100115616,"+","Zm00001d036765_T009","Zm00001d036765","sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana GN=SUD1 PE=1 SV=1//5.14866e-117",100100008,100107505,"+",7769,"downstream"]
["chr6","LNC_004178","XLOC_042172","lncRNA",102263891,102264594,"+","Zm00001d036820_T013","Zm00001d036820","sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1//0",102179235,102180689,"-",83201,"upstream"]
["chr6","LNC_004178","XLOC_042172","lncRNA",102263891,102264594,"+","Zm00001d036820_T020","Zm00001d036820","sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1//0",102179250,102180689,"-",83201,"upstream"]
["chr6","LNC_004179","XLOC_042177","lncRNA",102915020,102917014,"+","Zm00001d036825_T022","Zm00001d036825","sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155 OS=Arabidopsis thaliana GN=NUP155 PE=1 SV=1//6.01065e-72",102823224,102829574,"+",85445,"downstream"]
["chr1","LNC_000205","XLOC_002079","lncRNA",150128029,150128317,"+","Zm00001d030639_T003","Zm00001d030639","sp|Q94AC1|STR6_ARATH Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana GN=STR6 PE=2 SV=1//0",150130089,150133395,"+",1771,"upstream"]
["chr3","LNC_002325","XLOC_022947","lncRNA",168950502,168950866,"+","Zm00001d042479_T002","Zm00001d042479","sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At2g19490 PE=2 SV=2//8.7498e-164",169011244,169014820,"+",60377,"upstream"]
["chr3","LNC_002324","XLOC_022944","lncRNA",168671060,168671380,"+","Zm00001d042470_T011","Zm00001d042470","sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium discoideum GN=abkB PE=3 SV=1//1.65857e-07",168688719,168710404,"+",17338,"upstream"]
["chr3","LNC_002327","XLOC_022953","lncRNA",169211542,169211742,"+","Zm00001d042485_T001","Zm00001d042485","sp|Q8GXG1|ASPGB_ARATH Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2//4.45777e-20",169167019,169170703,"-",40838,"upstream"]
["chr3","LNC_002323","XLOC_022942","lncRNA",168542970,168543475,"+","Zm00001d042468_T006","Zm00001d042468","sp|Q9C5Y4|SMC21_ARATH Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis thaliana GN=SMC2-1 PE=2 SV=2//4.44886e-27",168625198,168635409,"+",81722,"upstream"]
["chr3","LNC_002329","XLOC_022988","lncRNA",170818359,170818851,"+","Zm00001d042526_T002","Zm00001d042526","sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1//7.94753e-07",170861366,170869496,"+",42514,"upstream"]
["chr4","LNC_003335","XLOC_033232","lncRNA",190774925,190775192,"-","Zm00001d052472_T011","Zm00001d052472","sp|O04973|LEU1A_SOLPN 2-isopropylmalate synthase A OS=Solanum pennellii GN=IPMSA PE=2 SV=1//9.78958e-16",190781641,190787230,"+",6448,"upstream"]
["chr4","LNC_003334","XLOC_033219","lncRNA",190266182,190266533,"-","Zm00001d052445_T003","Zm00001d052445","sp|Q6PDI5|ECM29_MOUSE Proteasome-associated protein ECM29 homolog OS=Mus musculus GN=Ecm29 PE=1 SV=3//4.78054e-50",190136423,190185316,"-",80865,"upstream"]
["chr4","LNC_003330","XLOC_033136","lncRNA",187249320,187249533,"-","Zm00001d052327_T038","Zm00001d052327","sp|C7J8E5|RTOR2_ORYSJ Regulatory-associated protein of TOR 2 OS=Oryza sativa subsp. japonica GN=RAPTOR2 PE=2 SV=2//2.00798e-175",187152824,187165451,"-",83868,"upstream"]
["chr4","LNC_003330","XLOC_033136","lncRNA",187249320,187249533,"-","Zm00001d052327_T013","Zm00001d052327","sp|C7J8E5|RTOR2_ORYSJ Regulatory-associated protein of TOR 2 OS=Oryza sativa subsp. japonica GN=RAPTOR2 PE=2 SV=2//2.00798e-175",187152495,187165484,"-",83835,"upstream"]
["chr1","LNC_000679","XLOC_007085","lncRNA",186946174,187015021,"-","Zm00001d031346_T001","Zm00001d031346","sp|Q67YM6|DIR11_ARATH Dirigent protein 11 OS=Arabidopsis thaliana GN=DIR11 PE=2 SV=1//3.45739e-09",187013825,187014620,"+",-796,"antisense"]
["chr1","LNC_000675","XLOC_007064","lncRNA",185865897,185869586,"-","Zm00001d031316_T020","Zm00001d031316","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//5.54579e-160",185876884,185881240,"-",7297,"downstream"]
["chr1","LNC_000676","XLOC_007064","lncRNA",185865897,185869623,"-","Zm00001d031311_T001","Zm00001d031311",null,185849377,185850081,"-",15815,"upstream"]
["chr1","LNC_000676","XLOC_007064","lncRNA",185865897,185869623,"-","Zm00001d031316_T004","Zm00001d031316","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//5.54579e-160",185876713,185882166,"-",7089,"downstream"]
["chr2","LNC_001678","XLOC_016263","lncRNA",202873063,202873346,"+","Zm00001d006257_T007","Zm00001d006257","sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2//4.06177e-158",202910093,202917109,"+",36746,"upstream"]
["chr2","LNC_001679","XLOC_016272","lncRNA",203233942,203234161,"+","Zm00001d006270_T007","Zm00001d006270","sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2 PE=1 SV=1//7.83496e-09",203314565,203322152,"-",80403,"downstream"]
["chr2","LNC_001672","XLOC_016175","lncRNA",197914559,197914760,"+","Zm00001d006089_T004","Zm00001d006089","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//8.31596e-22",197838330,197852949,"+",61609,"downstream"]
["chr2","LNC_001676","XLOC_016242","lncRNA",201966907,201967247,"+","Zm00001d006212_T001","Zm00001d006212","sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1//0",201957643,201963953,"-",2953,"upstream"]
["chr2","LNC_001676","XLOC_016242","lncRNA",201966907,201967247,"+","Zm00001d006210_T003","Zm00001d006210","sp|Q9LE59|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1//0",201907020,201911517,"-",55389,"upstream"]
["chr2","LNC_001677","XLOC_016259","lncRNA",202684089,202684578,"+","Zm00001d006238_T001","Zm00001d006238","sp|Q9SKR2|SYT1_ARATH Synaptotagmin-1 OS=Arabidopsis thaliana GN=SYT1 PE=1 SV=2//0",202615728,202622551,"-",61537,"upstream"]
["chr7","LNC_004958","XLOC_049661","lncRNA",95850944,95851170,"-","Zm00001d020148_T001","Zm00001d020148","sp|Q9ZNQ8|PERK4_ARATH Proline-rich receptor-like protein kinase PERK4 OS=Arabidopsis thaliana GN=PERK4 PE=1 SV=1//4.10896e-85",95798411,95800410,"+",50533,"downstream"]
["chr10","LNC_001202","XLOC_011918","lncRNA",61213316,61216988,"-","Zm00001d024275_T013","Zm00001d024275","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//4.26277e-53",61182318,61188943,"+",24372,"downstream"]
["chr10","LNC_001201","XLOC_011918","lncRNA",61213316,61216222,"-","Zm00001d024275_T006","Zm00001d024275","sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1//4.26277e-53",61181627,61188144,"+",25171,"downstream"]
["chr3","LNC_002130","XLOC_021310","lncRNA",16819695,16819977,"+","Zm00001d039856_T006","Zm00001d039856","sp|O80642|PGTB1_ARATH Geranylgeranyl transferase type-1 subunit beta OS=Arabidopsis thaliana GN=GGB PE=1 SV=1//2.6293e-120",16790693,16799630,"-",20064,"upstream"]
["chr3","LNC_002133","XLOC_021323","lncRNA",17454353,17454964,"+","Zm00001d039879_T001","Zm00001d039879","sp|Q9CPY6|GID4_MOUSE Glucose-induced degradation protein 4 homolog OS=Mus musculus GN=Gid4 PE=2 SV=1//1.49697e-27",17381216,17384469,"-",69883,"upstream"]
["chr3","LNC_002133","XLOC_021323","lncRNA",17454353,17454964,"+","Zm00001d039881_T003","Zm00001d039881","sp|Q9M2Y6|Y3972_ARATH Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=2 SV=1//2.10872e-25",17540895,17545272,"+",85930,"upstream"]
["chr5","LNC_003520","XLOC_035420","lncRNA",69408983,69409231,"+","Zm00001d014943_T040","Zm00001d014943","sp|Q9FGK8|SC16B_ARATH Protein transport protein SEC16B homolog OS=Arabidopsis thaliana GN=SEC16B PE=1 SV=1//3.67887e-15",69320659,69326123,"+",82859,"downstream"]
["chr5","LNC_003520","XLOC_035420","lncRNA",69408983,69409231,"+","Zm00001d014943_T004","Zm00001d014943","sp|Q9FGK8|SC16B_ARATH Protein transport protein SEC16B homolog OS=Arabidopsis thaliana GN=SEC16B PE=1 SV=1//3.67887e-15",69318801,69326099,"+",82883,"downstream"]
["chr5","LNC_003527","XLOC_035499","lncRNA",74893861,74894143,"+","Zm00001d015082_T016","Zm00001d015082","sp|Q8N3P4|VPS8_HUMAN Vacuolar protein sorting-associated protein 8 homolog OS=Homo sapiens GN=VPS8 PE=1 SV=3//2.23898e-58",74805491,74823222,"+",70638,"downstream"]
["chr5","LNC_003527","XLOC_035499","lncRNA",74893861,74894143,"+","Zm00001d015082_T027","Zm00001d015082","sp|Q8N3P4|VPS8_HUMAN Vacuolar protein sorting-associated protein 8 homolog OS=Homo sapiens GN=VPS8 PE=1 SV=3//2.23898e-58",74806736,74820070,"+",73790,"downstream"]
["chr9","LNC_005783","XLOC_057812","lncRNA",85624035,85624635,"+","Zm00001d046380_T001","Zm00001d046380",null,85595708,85597921,"+",26113,"downstream"]
["chr9","LNC_005783","XLOC_057812","lncRNA",85624035,85624635,"+","Zm00001d046381_T014","Zm00001d046381","sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3//9.26683e-20",85600992,85605598,"-",18436,"upstream"]
["chr7","LNC_004852","XLOC_048656","lncRNA",180677299,180677551,"+","Zm00001d022598_T001","Zm00001d022598",null,180746665,180750319,"-",69113,"downstream"]
["chr9","LNC_005706","XLOC_057248","lncRNA",27363943,27364260,"+","Zm00001d045586_T002","Zm00001d045586","sp|Q9SPE5|SNAG_ARATH Gamma-soluble NSF attachment protein OS=Arabidopsis thaliana GN=GSNAP PE=2 SV=1//3.22364e-49",27404833,27405698,"-",40572,"downstream"]
["chr7","LNC_004789","XLOC_047866","lncRNA",145150368,145150882,"+","Zm00001d021180_T001","Zm00001d021180","sp|F4HVW5|VAD1_ARATH Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic OS=Arabidopsis thaliana GN=VAD1 PE=1 SV=1//3.43456e-15",145134997,145143579,"+",6788,"downstream"]
["chr7","LNC_004780","XLOC_047786","lncRNA",140940496,140940749,"+","Zm00001d021036_T001","Zm00001d021036",null,141009143,141013714,"-",68393,"downstream"]
["chr7","LNC_004783","XLOC_047843","lncRNA",144173262,144173566,"+","Zm00001d021147_T004","Zm00001d021147",null,144097160,144102862,"-",70399,"upstream"]
["chr7","LNC_004786","XLOC_047865","lncRNA",145147356,145148249,"+","Zm00001d021185_T001","Zm00001d021185","sp|Q9LK27|GTE8_ARATH Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2//1.05309e-09",145200471,145202078,"+",52221,"upstream"]
["chr7","LNC_004786","XLOC_047865","lncRNA",145147356,145148249,"+","Zm00001d021178_T001","Zm00001d021178","sp|O04658|NOP5A_ARATH Probable nucleolar protein 5-1 OS=Arabidopsis thaliana GN=NOP5-1 PE=2 SV=2//8.00372e-19",145097442,145098301,"+",49054,"downstream"]
["chr2","LNC_001440","XLOC_014443","lncRNA",43186174,43186381,"+","Zm00001d003401_T006","Zm00001d003401","sp|P49106|14331_MAIZE 14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=3 SV=1//3.21721e-28",43088783,43091652,"-",94521,"upstream"]
["chr2","LNC_001443","XLOC_014460","lncRNA",44202362,44204401,"+","Zm00001d003431_T020","Zm00001d003431","sp|Q9FJ21|PME58_ARATH Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1//1.24451e-150",44206585,44207304,"+",2183,"upstream"]
["chr2","LNC_001444","XLOC_014460","lncRNA",44202571,44204311,"+","Zm00001d003431_T020","Zm00001d003431","sp|Q9FJ21|PME58_ARATH Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1//1.24451e-150",44206585,44207304,"+",2273,"upstream"]
["chr2","LNC_001449","XLOC_014502","lncRNA",46764424,46764780,"+","Zm00001d003525_T002","Zm00001d003525","sp|P26690|6DCS_SOYBN NAD(P)H-dependent 6&apos;-deoxychalcone synthase OS=Glycine max PE=1 SV=1//7.33893e-21",46712472,46719121,"-",45302,"upstream"]
["chr6","LNC_004439","XLOC_044476","lncRNA",85601598,85601958,"-","Zm00001d036356_T005","Zm00001d036356",null,85555461,85558301,"+",43296,"downstream"]
["chr6","LNC_004438","XLOC_044464","lncRNA",84758076,84758307,"-","Zm00001d036337_T004","Zm00001d036337","sp|O81242|RHL1_ARATH DNA-binding protein RHL1 OS=Arabidopsis thaliana GN=RHL1 PE=1 SV=1//2.05029e-56",84750176,84756971,"-",1104,"upstream"]
["chr9","LNC_006145","XLOC_061126","lncRNA",145717000,145718620,"-","Zm00001d047935_T003","Zm00001d047935","sp|Q10P67|DAPB2_ORYSJ Probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB2 PE=2 SV=1//4.5753e-08",145674247,145684191,"-",32808,"upstream"]
["chr9","LNC_006140","XLOC_060999","lncRNA",139908885,139909168,"-","Zm00001d047720_T001","Zm00001d047720","sp|Q8LGE7|NDA8B_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis thaliana GN=At5g18800 PE=1 SV=1//5.18569e-52",139930628,139934906,"-",21459,"downstream"]
["chr9","LNC_006140","XLOC_060999","lncRNA",139908885,139909168,"-","Zm00001d047717_T001","Zm00001d047717","sp|P69735|RB3GP_RAT Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus GN=Rab3gap1 PE=1 SV=2//5.46365e-23",139871466,139886476,"-",22408,"upstream"]
["chr9","LNC_006142","XLOC_061093","lncRNA",143794742,143795008,"-","Zm00001d047869_T005","Zm00001d047869","sp|Q5JNC0|COQ5_ORYSJ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1//7.06668e-170",143863141,143867854,"-",68132,"downstream"]
["chr9","LNC_006148","XLOC_061144","lncRNA",146585705,146586216,"-","Zm00001d047965_T006","Zm00001d047965","sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2//3.06993e-27",146541699,146546250,"+",39454,"downstream"]
["chr1","LNC_000792","XLOC_008111","lncRNA",252618477,252618971,"-","Zm00001d033159_T003","Zm00001d033159","sp|Q7TNV0|DEK_MOUSE Protein DEK OS=Mus musculus GN=Dek PE=1 SV=1//3.19786e-09",252520966,252528415,"-",90061,"upstream"]
["chr1","LNC_000793","XLOC_008112","lncRNA",252623171,252623546,"-","Zm00001d033159_T001","Zm00001d033159","sp|Q7TNV0|DEK_MOUSE Protein DEK OS=Mus musculus GN=Dek PE=1 SV=1//3.19786e-09",252520966,252528244,"-",94926,"upstream"]
["chr9","LNC_005829","XLOC_058187","lncRNA",113785782,113787976,"+","Zm00001d046978_T002","Zm00001d046978","sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium discoideum GN=DDB_G0284757 PE=3 SV=2//2.34405e-15",113853722,113862748,"+",65745,"upstream"]
["chr9","LNC_005828","XLOC_058187","lncRNA",113785782,113787234,"+","Zm00001d046974_T001","Zm00001d046974","sp|Q8H0W3|RVE6_ARATH Protein REVEILLE 6 OS=Arabidopsis thaliana GN=RVE6 PE=2 SV=1//6.31719e-71",113773320,113776465,"-",9316,"upstream"]
["chr1","LNC_000420","XLOC_004579","lncRNA",302604676,302605027,"+","Zm00001d034809_T008","Zm00001d034809","sp|Q9USM4|LUC7_SCHPO U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=usp106 PE=1 SV=1//6.78347e-12",302535604,302541187,"-",63488,"upstream"]
["chr8","LNC_005144","XLOC_051630","lncRNA",26909686,26911167,"+","Zm00001d008954_T001","Zm00001d008954",null,26894967,26903992,"-",5693,"upstream"]
["chr3","LNC_002497","XLOC_024866","lncRNA",32570892,32571891,"-","Zm00001d040218_T004","Zm00001d040218","sp|Q13117|DAZ2_HUMAN Deleted in azoospermia protein 2 OS=Homo sapiens GN=DAZ2 PE=1 SV=3//4.93229e-08",32562025,32570250,"-",641,"upstream"]
["chr3","LNC_002493","XLOC_024832","lncRNA",29750359,29750890,"-","Zm00001d040161_T004","Zm00001d040161","sp|Q9FXT6|PEX14_ARATH Peroxisomal membrane protein PEX14 OS=Arabidopsis thaliana GN=PEX14 PE=1 SV=2//6.45342e-38",29764775,29766722,"+",13884,"upstream"]
["chr3","LNC_002492","XLOC_024832","lncRNA",29729566,29750908,"-","Zm00001d040163_T001","Zm00001d040163","sp|Q8W250|DXR_ORYSJ 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2//2.98575e-08",29846486,29852954,"+",95577,"upstream"]
["chr7","LNC_004890","XLOC_049089","lncRNA",28534366,28534605,"-","Zm00001d019338_T001","Zm00001d019338",null,28546289,28549634,"+",11683,"upstream"]
["chr8","LNC_005206","XLOC_052116","lncRNA",72145006,72145447,"+","Zm00001d009591_T003","Zm00001d009591",null,72047547,72074493,"+",70512,"downstream"]
["chr8","LNC_005203","XLOC_052090","lncRNA",70115584,70115829,"+","Zm00001d009562_T067","Zm00001d009562","sp|P24342|HXD11_CHICK Homeobox protein Hox-D11 OS=Gallus gallus GN=HOXD11 PE=2 SV=2//1.26741e-06",70200067,70205809,"+",84237,"upstream"]
["chr8","LNC_005203","XLOC_052090","lncRNA",70115584,70115829,"+","Zm00001d009556_T002","Zm00001d009556","sp|P59910|DJB13_HUMAN DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1//2.07062e-16",70020682,70022525,"-",93058,"upstream"]
["chr6","LNC_004238","XLOC_042664","lncRNA",133093879,133097273,"+","Zm00001d037655_T001","Zm00001d037655",null,133125536,133126336,"+",28262,"upstream"]
["chr6","LNC_004231","XLOC_042629","lncRNA",130692675,130693098,"+","Zm00001d037591_T001","Zm00001d037591",null,130745190,130745262,"+",52091,"upstream"]
["chr6","LNC_004230","XLOC_042609","lncRNA",128958256,128958674,"+","Zm00001d037546_T015","Zm00001d037546",null,128894580,128909610,"+",48645,"downstream"]
["chr6","LNC_004237","XLOC_042651","lncRNA",132352890,132353170,"+","Zm00001d037628_T001","Zm00001d037628","sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1//4.78827e-14",132320661,132325847,"-",27042,"upstream"]
["chr6","LNC_004154","XLOC_041879","lncRNA",86755995,86759297,"+","Zm00001d036395_T013","Zm00001d036395","sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1//1.00702e-25",86726702,86732686,"+",23308,"downstream"]
["chr6","LNC_004153","XLOC_041871","lncRNA",86310775,86311021,"+","Zm00001d036376_T001","Zm00001d036376",null,86251976,86254015,"-",56759,"upstream"]
["chr6","LNC_004159","XLOC_041916","lncRNA",88486908,88487110,"+","Zm00001d036439_T001","Zm00001d036439","sp|Q9LMR3|TYRA2_ARATH Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1//5.26118e-114",88560354,88561488,"+",73243,"upstream"]
["chr3","LNC_002307","XLOC_022816","lncRNA",157545879,157546334,"+","Zm00001d042256_T003","Zm00001d042256","sp|Q9LZM4|WAKLQ_ARATH Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1//2.42115e-33",157560975,157565462,"+",14640,"upstream"]
["chr6","LNC_004287","XLOC_043427","lncRNA",169374136,169374464,"+","Zm00001d039051_T005","Zm00001d039051","sp|Q93YP9|ERDL4_ARATH Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1//0",169294030,169306049,"+",68086,"downstream"]
["chr3","LNC_002302","XLOC_022759","lncRNA",155364008,155364934,"+","Zm00001d042185_T012","Zm00001d042185","sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1//1.72527e-40",155343332,155348985,"-",15022,"upstream"]
["chr3","LNC_002301","XLOC_022759","lncRNA",155363445,155365035,"+","Zm00001d042183_T001","Zm00001d042183","sp|P19515|LIP_RHIMI Lipase OS=Rhizomucor miehei PE=1 SV=2//1.01291e-20",155335236,155338925,"+",24519,"downstream"]
["chr4","LNC_003318","XLOC_032994","lncRNA",178968401,178968661,"-","Zm00001d052083_T010","Zm00001d052083","sp|Q6Q4D0|TONS_ARATH Protein TONSOKU OS=Arabidopsis thaliana GN=TSK PE=1 SV=2//6.53927e-126",179005534,179017953,"-",36872,"downstream"]
["chr4","LNC_003317","XLOC_032977","lncRNA",177978083,177978564,"-","Zm00001d052060_T002","Zm00001d052060","sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1//0",178019071,178023237,"-",40506,"downstream"]
["chr4","LNC_003316","XLOC_032976","lncRNA",177968345,177970172,"-","Zm00001d052060_T005","Zm00001d052060","sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1//0",178019152,178023146,"-",48979,"downstream"]
["chr4","LNC_003314","XLOC_032942","lncRNA",176288054,176288484,"-","Zm00001d052009_T007","Zm00001d052009","sp|Q7T322|NAA35_DANRE N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Danio rerio GN=naa35 PE=2 SV=1//6.24877e-60",176346657,176361851,"-",58172,"downstream"]
["chr4","LNC_003313","XLOC_032940","lncRNA",176260501,176260744,"-","Zm00001d051998_T005","Zm00001d051998","sp|Q9ZUI6|AP1G2_ARATH AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana GN=At1g60070 PE=1 SV=2//1.82146e-50",176207227,176221261,"+",39239,"downstream"]
["chr4","LNC_003312","XLOC_032937","lncRNA",176221236,176222954,"-","Zm00001d051998_T012","Zm00001d051998","sp|Q9ZUI6|AP1G2_ARATH AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana GN=At1g60070 PE=1 SV=2//1.82146e-50",176207237,176221105,"+",130,"downstream"]
["chr4","LNC_003310","XLOC_032930","lncRNA",175732874,175733096,"-","Zm00001d051980_T002","Zm00001d051980","sp|Q67YI9|EPN2_ARATH Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana GN=EPSIN2 PE=1 SV=1//7.46825e-21",175828846,175832582,"+",95749,"upstream"]
["chr8","LNC_005468","XLOC_054821","lncRNA",64658843,64659189,"-","Zm00001d009440_T004","Zm00001d009440","sp|Q9ZPW2|APC10_ARATH Anaphase-promoting complex subunit 10 OS=Arabidopsis thaliana GN=APC10 PE=1 SV=2//6.14155e-15",64596292,64598908,"-",59934,"upstream"]
["chr1","LNC_000655","XLOC_006939","lncRNA",177779407,177780024,"-","Zm00001d031114_T001","Zm00001d031114",null,177789387,177789677,"-",9362,"downstream"]
["chr2","LNC_001655","XLOC_016001","lncRNA",188853573,188853821,"+","Zm00001d005791_T001","Zm00001d005791","sp|P0CG89|H4_SOYBN Histone H4 OS=Glycine max PE=3 SV=1//3.58019e-51",188810174,188810485,"+",43087,"downstream"]
["chr2","LNC_001651","XLOC_015995","lncRNA",188348357,188353875,"+","Zm00001d005785_T020","Zm00001d005785","sp|Q8VYD6|PP374_ARATH Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana GN=CBSPPR1 PE=2 SV=1//6.10646e-43",188375302,188392011,"+",21426,"upstream"]
["chr7","LNC_004934","XLOC_049506","lncRNA",78927369,78927814,"-","Zm00001d019947_T030","Zm00001d019947","sp|Q2H102|BST1_CHAGB GPI inositol-deacylase OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BST1 PE=3 SV=2//6.90987e-50",78819067,78858573,"+",68795,"downstream"]
["chr7","LNC_004932","XLOC_049491","lncRNA",76615887,76617010,"-","Zm00001d019926_T002","Zm00001d019926","sp|Q6H5J0|FABI2_ORYSJ Enoyl-[acyl-carrier-protein] reductase [NADH] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0277800 PE=2 SV=1//6.37202e-74",76710997,76715496,"-",93986,"downstream"]
["chr10","LNC_001268","XLOC_012587","lncRNA",114664317,114664521,"-","Zm00001d025339_T001","Zm00001d025339","sp|Q7XLX6|S1FA2_ORYSJ DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica GN=S1FA2 PE=3 SV=2//2.31659e-08",114701647,114703942,"-",37125,"downstream"]
["chr10","LNC_001264","XLOC_012511","lncRNA",108513135,108515336,"-","Zm00001d025193_T005","Zm00001d025193","sp|Q9C5Z2|EIF3H_ARATH Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=1 SV=2//4.49503e-172",108471583,108473127,"+",40007,"downstream"]
["chr10","LNC_001267","XLOC_012578","lncRNA",114018652,114019616,"-","Zm00001d025317_T001","Zm00001d025317","sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1 SV=1//1.89386e-13",114026048,114027155,"+",6431,"upstream"]
["chr10","LNC_001262","XLOC_012491","lncRNA",106832203,106834442,"-","Zm00001d025153_T008","Zm00001d025153","sp|P98205|ALA2_ARATH Phospholipid-transporting ATPase 2 OS=Arabidopsis thaliana GN=ALA2 PE=1 SV=1//0",106777098,106789955,"-",42247,"upstream"]
["chr3","LNC_002683","XLOC_026462","lncRNA",180927836,180928142,"-","Zm00001d042811_T001","Zm00001d042811","sp|O04203|HSPR2_ARATH Nematode resistance protein-like HSPRO2 OS=Arabidopsis thaliana GN=HSPRO2 PE=1 SV=1//6.75786e-121",180893820,180895226,"+",32609,"downstream"]
["chr3","LNC_002685","XLOC_026513","lncRNA",183804815,183806403,"-","Zm00001d042910_T013","Zm00001d042910","sp|Q9S7G7|MB3R1_ARATH Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1//8.78266e-80",183711906,183723135,"-",81679,"upstream"]
["chr2","LNC_001881","XLOC_018578","lncRNA",81399463,81399743,"-","Zm00001d004088_T002","Zm00001d004088",null,81499091,81501487,"+",99347,"upstream"]
["chr8","LNC_005417","XLOC_054522","lncRNA",28585488,28586197,"-","Zm00001d008984_T003","Zm00001d008984","sp|O24461|RAB7_PRUAR Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1//8.09521e-106",28574900,28578160,"+",7327,"downstream"]
["chr1","LNC_000135","XLOC_001673","lncRNA",97805688,97805928,"+","Zm00001d029988_T001","Zm00001d029988",null,97704275,97706222,"-",99465,"upstream"]
["chr2","LNC_001467","XLOC_014620","lncRNA",56799082,56799304,"+","Zm00001d000824_T001","Zm00001d000824",null,56786826,56787237,"+",11844,"downstream"]
["chr1","LNC_000417","XLOC_004556","lncRNA",301509025,301510502,"+","Zm00001d034758_T002","Zm00001d034758","sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1//3.69778e-85",301493011,301499560,"-",9464,"upstream"]
["chr6","LNC_004451","XLOC_044568","lncRNA",91781384,91781671,"-","Zm00001d036554_T001","Zm00001d036554","sp|Q381V6|PIF4_TRYB2 ATP-dependent DNA helicase PIF4 OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) GN=PIF4 PE=3 SV=1//1.69628e-08",91852819,91857408,"+",71147,"upstream"]
["chr6","LNC_004453","XLOC_044573","lncRNA",91843132,91843607,"-","Zm00001d036554_T001","Zm00001d036554","sp|Q381V6|PIF4_TRYB2 ATP-dependent DNA helicase PIF4 OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) GN=PIF4 PE=3 SV=1//1.69628e-08",91852819,91857408,"+",9211,"upstream"]
["chr6","LNC_004458","XLOC_044615","lncRNA",94211468,94211750,"-","Zm00001d036611_T005","Zm00001d036611","sp|P93820|Y1439_ARATH BTB/POZ domain-containing protein At1g04390 OS=Arabidopsis thaliana GN=At1g04390 PE=2 SV=3//9.0226e-146",94246659,94251230,"-",34908,"downstream"]
["chr2","LNC_001799","XLOC_017963","lncRNA",33809049,33809352,"-","Zm00001d003146_T001","Zm00001d003146","sp|Q96HH6|TMM19_HUMAN Transmembrane protein 19 OS=Homo sapiens GN=TMEM19 PE=1 SV=1//1.37955e-06",33736756,33746475,"-",62573,"upstream"]
["chr2","LNC_001798","XLOC_017961","lncRNA",33803147,33803433,"-","Zm00001d003151_T010","Zm00001d003151","sp|A7UL74|CTF7_ARATH Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Arabidopsis thaliana GN=CTF7 PE=1 SV=1//8.12835e-14",33845113,33847754,"+",41679,"upstream"]
["chr1","LNC_000419","XLOC_004575","lncRNA",302508660,302508960,"+","Zm00001d034807_T007","Zm00001d034807","sp|P46518|LEA14_GOSHI Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum GN=LEA14-A PE=2 SV=1//1.68136e-16",302527402,302530093,"+",18441,"upstream"]
["chr2","LNC_001797","XLOC_017944","lncRNA",33201038,33201385,"-","Zm00001d003127_T007","Zm00001d003127","sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1//8.66602e-53",33155107,33155898,"-",45139,"upstream"]
["chr2","LNC_001796","XLOC_017943","lncRNA",33194723,33195144,"-","Zm00001d003125_T002","Zm00001d003125","sp|Q0JBZ6|MRS2C_ORYSJ Magnesium transporter MRS2-C OS=Oryza sativa subsp. japonica GN=MRS2-C PE=3 SV=3//0",33105234,33110061,"-",84661,"upstream"]
["chr3","LNC_002510","XLOC_025016","lncRNA",43587380,43587683,"-","Zm00001d040441_T001","Zm00001d040441",null,43539013,43539885,"+",47494,"downstream"]
["chr4","LNC_003108","XLOC_031020","lncRNA",8260689,8261097,"-","Zm00001d048926_T004","Zm00001d048926",null,8239757,8246444,"-",14244,"upstream"]
["chr4","LNC_003100","XLOC_030857","lncRNA",1529382,1530108,"-","Zm00001d026714_T001","Zm00001d026714",null,1559597,1559922,"+",29488,"upstream"]
["chr4","LNC_003101","XLOC_030872","lncRNA",2572112,2572325,"-","Zm00001d048655_T002","Zm00001d048655","sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=3 SV=2//1.13267e-26",2668192,2674113,"-",95866,"downstream"]
["chr4","LNC_003104","XLOC_030918","lncRNA",4230477,4230801,"-","Zm00001d048727_T001","Zm00001d048727","sp|C5Y7C8|CSPLF_SORBI CASP-like protein 1U4 OS=Sorghum bicolor GN=Sb05g025810 PE=2 SV=1//4.51817e-43",4318415,4319363,"+",87613,"upstream"]
["chr4","LNC_003104","XLOC_030918","lncRNA",4230477,4230801,"-","Zm00001d048718_T008","Zm00001d048718","sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1//1.61289e-06",4153365,4160805,"-",69671,"upstream"]
["chr3","LNC_002471","XLOC_024686","lncRNA",19326571,19326808,"-","Zm00001d039914_T001","Zm00001d039914",null,19237764,19238975,"-",87595,"upstream"]
["chr3","LNC_002473","XLOC_024716","lncRNA",21082499,21082803,"-","Zm00001d039968_T001","Zm00001d039968","sp|Q39160|MYO5_ARATH Myosin-5 OS=Arabidopsis thaliana GN=XI-1 PE=1 SV=1//3.59987e-27",21041013,21043490,"-",39008,"upstream"]
["chr3","LNC_002478","XLOC_024740","lncRNA",22935227,22937311,"-","Zm00001d040010_T007","Zm00001d040010","sp|A0JMW6|T214A_XENLA Transmembrane protein 214-A OS=Xenopus laevis GN=tmem214-a PE=2 SV=1//1.4384e-10",22854254,22860334,"+",74892,"downstream"]
["chr6","LNC_004213","XLOC_042418","lncRNA",117491429,117493985,"+","Zm00001d037240_T008","Zm00001d037240","sp|Q8LE52|DHAR3_ARATH Glutathione S-transferase DHAR3, chloroplastic OS=Arabidopsis thaliana GN=DHAR3 PE=1 SV=1//2.7762e-78",117483693,117495190,"-",-2557,"antisense"]
["chr6","LNC_004214","XLOC_042419","lncRNA",117497021,117497352,"+","Zm00001d037240_T011","Zm00001d037240","sp|Q8LE52|DHAR3_ARATH Glutathione S-transferase DHAR3, chloroplastic OS=Arabidopsis thaliana GN=DHAR3 PE=1 SV=1//2.7762e-78",117483707,117491394,"-",5626,"upstream"]
["chr6","LNC_004138","XLOC_041724","lncRNA",75194886,75196044,"+","Zm00001d036161_T032","Zm00001d036161","sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta&apos;-1 OS=Oryza sativa subsp. japonica GN=Os06g0143900 PE=2 SV=1//5.80733e-83",75126096,75153275,"-",41610,"upstream"]
["chr6","LNC_004137","XLOC_041715","lncRNA",74681518,74681807,"+","Zm00001d036151_T001","Zm00001d036151","sp|P47815|IF1A_WHEAT Eukaryotic translation initiation factor 1A OS=Triticum aestivum PE=1 SV=2//2.8798e-73",74662764,74663198,"-",18319,"upstream"]
["chr7","LNC_004682","XLOC_046952","lncRNA",62205982,62206325,"+","Zm00001d019797_T001","Zm00001d019797",null,62259925,62261542,"+",53599,"upstream"]
["chr5","LNC_003487","XLOC_035093","lncRNA",41515731,41516159,"+","Zm00001d014340_T007","Zm00001d014340","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//7.46477e-51",41547321,41566834,"-",31161,"downstream"]
["chr8","LNC_005629","XLOC_056264","lncRNA",166456870,166457464,"-","Zm00001d012010_T001","Zm00001d012010",null,166461603,166461962,"-",4138,"downstream"]
["chr8","LNC_005628","XLOC_056249","lncRNA",165974919,165975625,"-","Zm00001d011983_T031","Zm00001d011983",null,165872961,165879565,"+",95353,"downstream"]
["chr8","LNC_005620","XLOC_056166","lncRNA",162371655,162372037,"-","Zm00001d011835_T001","Zm00001d011835","sp|Q5JK52|NADK1_ORYSJ Probable NAD kinase 1 OS=Oryza sativa subsp. japonica GN=Os01g0957000 PE=2 SV=1//5.37192e-106",162305845,162312492,"-",59162,"upstream"]
["chr8","LNC_005623","XLOC_056190","lncRNA",163879882,163881374,"-","Zm00001d011885_T008","Zm00001d011885","sp|Q28F51|TADBP_XENTR TAR DNA-binding protein 43 OS=Xenopus tropicalis GN=tardbp PE=2 SV=1//1.27417e-10",163934400,163941137,"+",53025,"upstream"]
["chr8","LNC_005627","XLOC_056247","lncRNA",165932456,165934258,"-","Zm00001d011983_T006","Zm00001d011983",null,165872917,165879565,"+",52890,"downstream"]
["chr8","LNC_005627","XLOC_056247","lncRNA",165932456,165934258,"-","Zm00001d011983_T016","Zm00001d011983",null,165872925,165878934,"+",53521,"downstream"]
["chrMt","LNC_006271","XLOC_062221","lncRNA",176371,179743,"-","GRMZM5G873916_T01","GRMZM5G873916",null,222801,223196,"-",43057,"downstream"]
["chr2","LNC_001632","XLOC_015802","lncRNA",175848250,175848547,"+","Zm00001d005489_T009","Zm00001d005489","sp|B1L765|GYAR_KORCO Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1//6.05228e-12",175795155,175802687,"+",45562,"downstream"]
["chr10","LNC_001247","XLOC_012349","lncRNA",96135017,96135236,"-","Zm00001d024943_T001","Zm00001d024943","sp|Q42798|C93A1_SOYBN 3,9-dihydroxypterocarpan 6A-monooxygenase OS=Glycine max GN=CYP93A1 PE=1 SV=1//1.94348e-137",96104177,96106076,"-",28940,"upstream"]
["chr10","LNC_001248","XLOC_012353","lncRNA",96430484,96433261,"-","Zm00001d024947_T006","Zm00001d024947","sp|Q6MWG9|FH18_ORYSJ Formin-like protein 18 OS=Oryza sativa subsp. japonica GN=FH18 PE=2 SV=1//6.06261e-10",96358488,96363316,"-",67167,"upstream"]
["chrMt","LNC_006270","XLOC_062192","lncRNA",506541,507953,"+","GRMZM5G862955_T02","GRMZM5G862955","sp|P04373|COX2_ORYSJ Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp. japonica GN=COX2 PE=3 SV=4//5.55763e-81",541369,543626,"+",33415,"upstream"]
["chr1","LNC_000808","XLOC_008313","lncRNA",264523401,264523612,"-","Zm00001d033502_T004","Zm00001d033502","sp|Q8LB17|RBL15_ARATH Rhomboid-like protein 15 OS=Arabidopsis thaliana GN=RBL15 PE=1 SV=2//2.7525e-169",264617852,264642218,"+",94239,"upstream"]
["chr2","LNC_001409","XLOC_014201","lncRNA",30143558,30146104,"+","Zm00001d003034_T002","Zm00001d003034",null,30048418,30052708,"+",90849,"downstream"]
["chr2","LNC_001401","XLOC_014054","lncRNA",22475168,22475742,"+","Zm00001d002781_T024","Zm00001d002781","sp|Q7TP47|HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1//2.72908e-32",22565046,22571240,"+",89303,"upstream"]
["chr2","LNC_001401","XLOC_014054","lncRNA",22475168,22475742,"+","Zm00001d002781_T010","Zm00001d002781","sp|Q7TP47|HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1//2.72908e-32",22563777,22571238,"+",88034,"upstream"]
["chr6","LNC_004479","XLOC_044798","lncRNA",106316297,106316746,"-","Zm00001d036919_T008","Zm00001d036919","sp|Q9SJE2|FATB_ARATH Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana GN=FATB PE=1 SV=1//1.08876e-152",106386907,106391451,"-",70160,"downstream"]
["chr6","LNC_004478","XLOC_044796","lncRNA",106237466,106237689,"-","Zm00001d036908_T001","Zm00001d036908",null,106147303,106147978,"+",89487,"downstream"]
["chr6","LNC_004475","XLOC_044729","lncRNA",100887280,100887612,"-","Zm00001d036785_T007","Zm00001d036785",null,100869667,100876559,"+",10720,"downstream"]
["chr6","LNC_004474","XLOC_044701","lncRNA",99661282,99661727,"-","Zm00001d001402_T001","Zm00001d001402",null,99655700,99655965,"-",5316,"upstream"]
["chr6","LNC_004470","XLOC_044680","lncRNA",98208505,98209002,"-","Zm00001d036704_T001","Zm00001d036704","sp|Q3S4A7|AHK5_ARATH Histidine kinase 5 OS=Arabidopsis thaliana GN=AHK5 PE=1 SV=1//0",98143012,98152082,"-",56422,"upstream"]
["chrB73V4_ctg150","LNC_006189","XLOC_061667","lncRNA",654764,654996,"+","Zm00001d000011_T024","Zm00001d000011","sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2//7.73694e-11",729672,734289,"-",74675,"downstream"]
["chrB73V4_ctg150","LNC_006189","XLOC_061667","lncRNA",654764,654996,"+","Zm00001d000011_T010","Zm00001d000011","sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2//7.73694e-11",728928,734365,"-",73931,"downstream"]
["chr4","LNC_003291","XLOC_032707","lncRNA",164350797,164351163,"-","Zm00001d051607_T004","Zm00001d051607","sp|F4JMJ1|HSP7R_ARATH Heat shock 70 kDa protein 17 OS=Arabidopsis thaliana GN=HSP70-17 PE=2 SV=1//0",164393006,164401348,"+",41842,"upstream"]
["chr4","LNC_003296","XLOC_032803","lncRNA",168941102,168941720,"-","Zm00001d051754_T006","Zm00001d051754","sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=2 SV=1//0",168917197,168920012,"-",21089,"upstream"]
["chr4","LNC_003294","XLOC_032750","lncRNA",166795267,166795477,"-","Zm00001d051690_T006","Zm00001d051690","sp|Q5PNS0|Y3228_ARATH PHD finger protein At3g20280 OS=Arabidopsis thaliana GN=At3g20280 PE=2 SV=1//2.25131e-29",166834890,166838178,"+",39412,"upstream"]
["chr1","LNC_000752","XLOC_007807","lncRNA",233747341,233748140,"-","Zm00001d032667_T012","Zm00001d032667","sp|O04630|SYTM1_ARATH Threonine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana GN=THRRS PE=2 SV=3//4.66205e-128",233706220,233715985,"-",31355,"upstream"]
["chr1","LNC_000752","XLOC_007807","lncRNA",233747341,233748140,"-","Zm00001d032670_T011","Zm00001d032670",null,233736390,233742774,"+",4566,"downstream"]
["chr1","LNC_000751","XLOC_007760","lncRNA",231420433,231420837,"-","Zm00001d032588_T007","Zm00001d032588","sp|Q84VK7|SDH32_ORYSJ Succinate dehydrogenase subunit 3-2, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH3-2 PE=1 SV=2//1.2373e-47",231396828,231400163,"-",20269,"upstream"]
["chr1","LNC_000757","XLOC_007848","lncRNA",235950261,235950556,"-","Zm00001d032716_T004","Zm00001d032716","sp|Q9NBK5|TRC_DROME Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1//5.70433e-13",235902410,235904731,"-",45529,"upstream"]
["chr9","LNC_005984","XLOC_059757","lncRNA",38765248,38770757,"-","Zm00001d045783_T030","Zm00001d045783","sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3//2.77646e-55",38794245,38813464,"-",23487,"downstream"]
["chr9","LNC_005985","XLOC_059759","lncRNA",38839800,38840050,"-","Zm00001d045783_T065","Zm00001d045783","sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3//2.77646e-55",38794295,38813489,"-",26310,"upstream"]
["chr3","LNC_002538","XLOC_025256","lncRNA",68219900,68220349,"-","Zm00001d040829_T001","Zm00001d040829","sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1//1.45245e-27",68286049,68287433,"+",65699,"upstream"]
["chr3","LNC_002534","XLOC_025224","lncRNA",65701952,65702218,"-","Zm00001d040783_T001","Zm00001d040783",null,65628348,65628851,"-",73100,"upstream"]
["chr4","LNC_003124","XLOC_031121","lncRNA",16132664,16133010,"-","Zm00001d049100_T002","Zm00001d049100","sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=2 SV=1//5.78931e-29",16064760,16083869,"-",48794,"upstream"]
["chr4","LNC_003126","XLOC_031136","lncRNA",16917319,16917599,"-","Zm00001d049125_T003","Zm00001d049125","sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1//7.93128e-132",16816622,16824693,"+",92625,"downstream"]
["chr3","LNC_002131","XLOC_021321","lncRNA",17397688,17398313,"+","Zm00001d039878_T001","Zm00001d039878",null,17379356,17380149,"+",17538,"downstream"]
["chr8","LNC_005186","XLOC_052033","lncRNA",65045916,65046346,"+","Zm00001d009452_T018","Zm00001d009452","sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2//5.89611e-30",65142086,65150555,"-",95739,"downstream"]
["chr3","LNC_002452","XLOC_024436","lncRNA",5269455,5270103,"-","Zm00001d039475_T002","Zm00001d039475","sp|Q6A332|ALY3_ARATH Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana GN=ALY3 PE=1 SV=1//1.23903e-13",5284136,5296963,"-",14032,"downstream"]
["chr3","LNC_002451","XLOC_024435","lncRNA",5267546,5268382,"-","Zm00001d000467_T001","Zm00001d000467",null,5204338,5204746,"+",62799,"downstream"]
["chr3","LNC_002450","XLOC_024428","lncRNA",4803992,4804244,"-","Zm00001d039451_T001","Zm00001d039451","sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mrnC PE=3 SV=1//8.71969e-07",4734400,4737230,"-",66761,"upstream"]
["chr3","LNC_002455","XLOC_024505","lncRNA",8514592,8515793,"-","Zm00001d039589_T024","Zm00001d039589","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//3.83809e-100",8522196,8533395,"+",6402,"upstream"]
["chr3","LNC_002455","XLOC_024505","lncRNA",8514592,8515793,"-","Zm00001d039590_T004","Zm00001d039590","sp|Q8LJT8|TKI1_ARATH TSL-kinase interacting protein 1 OS=Arabidopsis thaliana GN=TKI1 PE=1 SV=2//6.28244e-45",8533853,8538176,"+",18059,"upstream"]
["chr3","LNC_002454","XLOC_024476","lncRNA",7145785,7146129,"-","Zm00001d039527_T001","Zm00001d039527",null,7133054,7133722,"-",12062,"upstream"]
["chr4","LNC_002985","XLOC_029548","lncRNA",170101216,170102323,"+","Zm00001d051809_T004","Zm00001d051809","sp|Q8GUM5|NICA_ARATH Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1//6.96627e-24",170142986,170148571,"-",40662,"downstream"]
["chr4","LNC_002980","XLOC_029475","lncRNA",166155073,166155298,"+","Zm00001d051671_T022","Zm00001d051671","sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=3 SV=2//1.2863e-25",166250909,166258382,"-",95610,"downstream"]
["chr4","LNC_002980","XLOC_029475","lncRNA",166155073,166155298,"+","Zm00001d051671_T025","Zm00001d051671","sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=3 SV=2//1.2863e-25",166250910,166259298,"-",95611,"downstream"]
["chr6","LNC_004277","XLOC_043273","lncRNA",164159617,164159817,"+","Zm00001d038770_T001","Zm00001d038770",null,164172805,164173786,"+",12987,"upstream"]
["chr6","LNC_004277","XLOC_043273","lncRNA",164159617,164159817,"+","Zm00001d038766_T001","Zm00001d038766","sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1//7.29612e-47",164157903,164159112,"-",504,"upstream"]
["chr6","LNC_004270","XLOC_043144","lncRNA",159572985,159573232,"+","Zm00001d038546_T005","Zm00001d038546","sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1//4.23031e-30",159661700,159665336,"-",88467,"downstream"]
["chr10","LNC_001184","XLOC_011812","lncRNA",48723030,48723426,"-","Zm00001d024134_T001","Zm00001d024134","sp|Q9SAH3|Y1887_ARATH Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana GN=At1g80870 PE=3 SV=1//2.35138e-25",48629599,48631479,"+",91550,"downstream"]
["chr2","LNC_001980","XLOC_019460","lncRNA",169830479,169830947,"-","Zm00001d005332_T001","Zm00001d005332","sp|Q6K7R2|PIRL6_ORYSJ Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica GN=IRL6 PE=2 SV=1//4.63741e-19",169782346,169785403,"+",45075,"downstream"]
["chr2","LNC_001985","XLOC_019502","lncRNA",173297178,173297435,"-","Zm00001d005421_T006","Zm00001d005421","sp|Q9ATM8|PIP22_MAIZE Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1//0",173379017,173382155,"+",81581,"upstream"]
["chr2","LNC_001986","XLOC_019507","lncRNA",173460579,173460854,"-","Zm00001d005421_T018","Zm00001d005421","sp|Q9ATM8|PIP22_MAIZE Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1//0",173379579,173382443,"+",78135,"downstream"]
["chr2","LNC_001989","XLOC_019531","lncRNA",175132374,175132576,"-","Zm00001d005468_T001","Zm00001d005468","sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2//1.47783e-92",175202127,175205252,"+",69550,"upstream"]
["chr8","LNC_005334","XLOC_053595","lncRNA",166145818,166147317,"+","Zm00001d011996_T001","Zm00001d011996","sp|Q9MAB3|NOP5B_ARATH Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1//0",166092023,166094834,"-",50983,"upstream"]
["chr5","LNC_003728","XLOC_037811","lncRNA",4533972,4534471,"-","Zm00001d013090_T003","Zm00001d013090","sp|Q0WQ41|IP5P7_ARATH Type IV inositol polyphosphate 5-phosphatase 7 OS=Arabidopsis thaliana GN=IP5P7 PE=1 SV=1//0",4574521,4579025,"-",40049,"downstream"]
["chr5","LNC_003729","XLOC_037822","lncRNA",4790596,4790944,"-","Zm00001d013115_T001","Zm00001d013115","sp|O64791|SY124_ARATH Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1//1.29959e-09",4880976,4881416,"-",90031,"downstream"]
["chr5","LNC_003729","XLOC_037822","lncRNA",4790596,4790944,"-","Zm00001d013112_T012","Zm00001d013112",null,4870815,4876521,"+",79870,"upstream"]
["chr5","LNC_003729","XLOC_037822","lncRNA",4790596,4790944,"-","Zm00001d013101_T003","Zm00001d013101","sp|Q8L608|HPSE2_ARATH Heparanase-like protein 2 OS=Arabidopsis thaliana GN=At5g61250 PE=2 SV=1//3.11657e-31",4711213,4714182,"+",76413,"downstream"]
["chr5","LNC_003723","XLOC_037764","lncRNA",3200653,3201623,"-","Zm00001d013012_T007","Zm00001d013012",null,3197624,3201933,"+",-971,"antisense"]
["chr5","LNC_003723","XLOC_037764","lncRNA",3200653,3201623,"-","Zm00001d013019_T020","Zm00001d013019","sp|Q8RXF8|MIRO1_ARATH Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana GN=MIRO1 PE=1 SV=1//3.91194e-06",3282211,3292708,"+",80587,"upstream"]
["chr5","LNC_003723","XLOC_037764","lncRNA",3200653,3201623,"-","Zm00001d013006_T020","Zm00001d013006","sp|Q7XZF7|GYRA_ORYSJ Probable DNA gyrase subunit A, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=GYRA PE=2 SV=2//4.49098e-32",3137739,3148454,"+",52198,"downstream"]
["chr5","LNC_003720","XLOC_037695","lncRNA",1283553,1283861,"-","Zm00001d012865_T013","Zm00001d012865","sp|Q9CYI4|LUC7L_MOUSE Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l PE=2 SV=2//1.28309e-11",1349372,1357057,"+",65510,"upstream"]
["chr5","LNC_003720","XLOC_037695","lncRNA",1283553,1283861,"-","Zm00001d012865_T029","Zm00001d012865","sp|Q9CYI4|LUC7L_MOUSE Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l PE=2 SV=2//1.28309e-11",1349561,1357077,"+",65699,"upstream"]
["chr5","LNC_003721","XLOC_037744","lncRNA",2483390,2488180,"-","Zm00001d012969_T002","Zm00001d012969","sp|P42744|ULA1_ARATH NEDD8-activating enzyme E1 regulatory subunit OS=Arabidopsis thaliana GN=AXR1 PE=1 SV=1//2.86166e-53",2467426,2481392,"-",1997,"upstream"]
["chr5","LNC_003726","XLOC_037792","lncRNA",3893123,3896944,"-","Zm00001d013059_T003","Zm00001d013059","sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B OS=Arabidopsis thaliana GN=VPS35B PE=1 SV=1//2.48955e-14",3972809,3981360,"-",75864,"downstream"]
["chr5","LNC_003727","XLOC_037805","lncRNA",4437971,4439797,"-","Zm00001d013083_T004","Zm00001d013083","sp|Q9FQ04|XRN4_ARATH 5&apos;-3&apos; exoribonuclease 4 OS=Arabidopsis thaliana GN=XRN4 PE=2 SV=1//1.75023e-123",4461282,4476503,"-",21484,"downstream"]
["chr5","LNC_003727","XLOC_037805","lncRNA",4437971,4439797,"-","Zm00001d013083_T017","Zm00001d013083","sp|Q9FQ04|XRN4_ARATH 5&apos;-3&apos; exoribonuclease 4 OS=Arabidopsis thaliana GN=XRN4 PE=2 SV=1//1.75023e-123",4461511,4476433,"-",21713,"downstream"]
["chr5","LNC_003725","XLOC_037778","lncRNA",3534429,3534832,"-","Zm00001d013043_T002","Zm00001d013043","sp|Q84M47|APRL5_ORYSJ 5&apos;-adenylylsulfate reductase-like 5 OS=Oryza sativa subsp. japonica GN=APRL5 PE=2 SV=1//3.55894e-115",3626354,3629045,"-",91521,"downstream"]
["chr5","LNC_003725","XLOC_037778","lncRNA",3534429,3534832,"-","Zm00001d013034_T001","Zm00001d013034","sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1//5.70136e-127",3494823,3496592,"-",37836,"upstream"]
["chr8","LNC_005339","XLOC_053745","lncRNA",171860167,171860585,"+","Zm00001d012286_T004","Zm00001d012286","sp|Q9FG38|SNX1_ARATH Sorting nexin 1 OS=Arabidopsis thaliana GN=SNX1 PE=1 SV=1//7.5641e-19",171908361,171912513,"+",47775,"upstream"]
["chr5","LNC_003460","XLOC_034814","lncRNA",22649781,22650001,"+","Zm00001d001523_T001","Zm00001d001523",null,22692668,22693180,"+",42666,"upstream"]
["chr5","LNC_003465","XLOC_034874","lncRNA",26090579,26090942,"+","Zm00001d013956_T002","Zm00001d013956","sp|Q9ATL7|TIP31_MAIZE Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1//5.96899e-138",26132033,26133231,"+",41090,"upstream"]
["chr8","LNC_005602","XLOC_055906","lncRNA",149492648,149492905,"-","Zm00001d011397_T001","Zm00001d011397","sp|B7F845|R10A_ORYSJ 60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1//1.28518e-31",149488689,149490232,"+",2415,"downstream"]
["chr8","LNC_005602","XLOC_055906","lncRNA",149492648,149492905,"-","Zm00001d011401_T001","Zm00001d011401","sp|Q0JL44|SGT1_ORYSJ Protein SGT1 homolog OS=Oryza sativa subsp. japonica GN=SGT1 PE=1 SV=1//9.28628e-79",149523666,149538687,"+",30760,"upstream"]
["chr8","LNC_005609","XLOC_056025","lncRNA",156164487,156164785,"-","Zm00001d011619_T005","Zm00001d011619","sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1//9.40668e-09",156247578,156251499,"+",82792,"upstream"]
["chr8","LNC_005609","XLOC_056025","lncRNA",156164487,156164785,"-","Zm00001d011617_T004","Zm00001d011617",null,156102519,156107781,"+",56705,"downstream"]
["chr2","LNC_001611","XLOC_015553","lncRNA",157701874,157702270,"+","Zm00001d005090_T169","Zm00001d005090","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//2.06572e-33",157783083,157793463,"-",80812,"downstream"]
["chr2","LNC_001611","XLOC_015553","lncRNA",157701874,157702270,"+","Zm00001d005090_T067","Zm00001d005090","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//2.06572e-33",157783016,157791286,"-",80745,"downstream"]
["chr2","LNC_001612","XLOC_015570","lncRNA",158881150,158884859,"+","Zm00001d005112_T001","Zm00001d005112","sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3//9.74197e-08",158932522,158936225,"+",47662,"upstream"]
["chr2","LNC_001617","XLOC_015636","lncRNA",162584830,162590089,"+","Zm00001d005178_T001","Zm00001d005178",null,162536992,162545905,"+",38924,"downstream"]
["chr1","LNC_000560","XLOC_006153","lncRNA",92460552,92460948,"-","Zm00001d029889_T015","Zm00001d029889",null,92552711,92558682,"+",91762,"upstream"]
["chr7","LNC_005044","XLOC_050535","lncRNA",158638168,158638409,"-","Zm00001d021633_T011","Zm00001d021633","sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1//1.82528e-22",158634657,158639194,"+",-242,"antisense"]
["chr5","LNC_003911","XLOC_039730","lncRNA",159723191,159725000,"-","Zm00001d016371_T001","Zm00001d016371",null,159620927,159627681,"+",95509,"downstream"]
["chr5","LNC_003916","XLOC_039778","lncRNA",164596131,164596414,"-","Zm00001d016486_T002","Zm00001d016486","sp|Q84W55|IP5PF_ARATH Type II inositol polyphosphate 5-phosphatase 15 OS=Arabidopsis thaliana GN=IP5P15 PE=1 SV=2//0",164499366,164511896,"+",84234,"downstream"]
["chr1","LNC_000176","XLOC_001921","lncRNA",129963644,129963919,"+","Zm00001d030402_T001","Zm00001d030402","sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 SV=1//6.35328e-80",129889303,129891523,"+",72120,"downstream"]
["chr8","LNC_005450","XLOC_054752","lncRNA",56646202,56646519,"-","Zm00001d009330_T002","Zm00001d009330",null,56626091,56637799,"-",8402,"upstream"]
["chr1","LNC_000525","XLOC_005822","lncRNA",66387653,66387970,"-","Zm00001d029333_T013","Zm00001d029333","sp|B3H6K1|Y4791_ARATH Uncharacterized protein At4g17910 OS=Arabidopsis thaliana GN=At4g17910 PE=2 SV=2//2.16039e-123",66334448,66337105,"+",50547,"downstream"]
["chr1","LNC_000522","XLOC_005765","lncRNA",62735085,62737094,"-","Zm00001d029215_T007","Zm00001d029215","sp|O81644|VILI2_ARATH Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2//1.00642e-14",62728896,62739035,"+",-2010,"antisense"]
["chr1","LNC_000522","XLOC_005765","lncRNA",62735085,62737094,"-","Zm00001d029215_T013","Zm00001d029215","sp|O81644|VILI2_ARATH Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2//1.00642e-14",62729057,62739088,"+",-2010,"antisense"]
["chr2","LNC_001424","XLOC_014320","lncRNA",36780167,36785198,"+","Zm00001d003229_T012","Zm00001d003229","sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6 PE=2 SV=2//0",36859026,36864145,"+",73827,"upstream"]
["chr2","LNC_001421","XLOC_014314","lncRNA",36624319,36624665,"+","Zm00001d003222_T013","Zm00001d003222","sp|Q7XUF4|CDKG2_ORYSJ Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2//0",36694357,36699029,"+",69691,"upstream"]
["chr1","LNC_000821","XLOC_008513","lncRNA",275494094,275494448,"-","Zm00001d033843_T011","Zm00001d033843","sp|F4KDH9|FIPS5_ARATH FIP1[V]-like protein OS=Arabidopsis thaliana GN=FIPS5 PE=1 SV=1//1.63554e-33",275590749,275609065,"+",96300,"upstream"]
["chr1","LNC_000823","XLOC_008525","lncRNA",276006316,276006860,"-","Zm00001d033859_T003","Zm00001d033859","sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1//5.01346e-59",276073463,276081151,"-",66602,"downstream"]
["chr6","LNC_004491","XLOC_044920","lncRNA",114041540,114041933,"-","Zm00001d037156_T081","Zm00001d037156","sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros OS=Drosophila melanogaster GN=rno PE=1 SV=1//2.94655e-13",114067886,114081304,"-",25952,"downstream"]
["chr6","LNC_004491","XLOC_044920","lncRNA",114041540,114041933,"-","Zm00001d037156_T018","Zm00001d037156","sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros OS=Drosophila melanogaster GN=rno PE=1 SV=1//2.94655e-13",114067766,114081286,"-",25832,"downstream"]
["chr6","LNC_004493","XLOC_044923","lncRNA",114338138,114339953,"-","Zm00001d037160_T002","Zm00001d037160","sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1//1.58023e-107",114309734,114312011,"-",26126,"upstream"]
["chr6","LNC_004498","XLOC_044990","lncRNA",119336074,119336342,"-","Zm00001d037279_T011","Zm00001d037279","sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2//5.91892e-177",119259228,119267817,"+",68256,"downstream"]
["chr2","LNC_002088","XLOC_020757","lncRNA",236776020,236781450,"-","Zm00001d007645_T008","Zm00001d007645","sp|Q70Z53|F10C1_HUMAN Protein FRA10AC1 OS=Homo sapiens GN=FRA10AC1 PE=1 SV=3//4.30114e-16",236829186,236833355,"-",47735,"downstream"]
["chr2","LNC_002081","XLOC_020626","lncRNA",230504625,230506531,"-","Zm00001d007391_T010","Zm00001d007391",null,230573451,230575688,"-",66919,"downstream"]
["chr2","LNC_002081","XLOC_020626","lncRNA",230504625,230506531,"-","Zm00001d007387_T007","Zm00001d007387","sp|O80438|MAK3_ARATH N-alpha-acetyltransferase MAK3 OS=Arabidopsis thaliana GN=MAK3 PE=2 SV=1//8.69232e-20",230449400,230454088,"+",50536,"downstream"]
["chr2","LNC_002082","XLOC_020639","lncRNA",231109318,231109551,"-","Zm00001d007407_T013","Zm00001d007407","sp|Q9LKX9|RBR1_MAIZE Retinoblastoma-related protein 1 OS=Zea mays GN=RBR1 PE=1 SV=2//0",231039943,231047416,"-",61901,"upstream"]
["chr2","LNC_002083","XLOC_020647","lncRNA",231682877,231683199,"-","Zm00001d007434_T012","Zm00001d007434","sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1//3.69823e-10",231628749,231635584,"-",47292,"upstream"]
["chr1","LNC_000774","XLOC_007990","lncRNA",244943720,244947088,"-","Zm00001d032961_T019","Zm00001d032961","sp|Q6ET36|CPS1_ORYSJ Ent-copalyl diphosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CPS1 PE=2 SV=1//1.84551e-16",244859761,244867384,"+",76335,"downstream"]
["chr1","LNC_000775","XLOC_007990","lncRNA",244943720,244947090,"-","Zm00001d032962_T005","Zm00001d032962","sp|F4HXQ7|MYOB1_ARATH Myosin-binding protein 1 OS=Arabidopsis thaliana GN=MYOB1 PE=1 SV=1//1.97544e-12",244884709,244894265,"-",49454,"upstream"]
["chr1","LNC_000775","XLOC_007990","lncRNA",244943720,244947090,"-","Zm00001d032962_T012","Zm00001d032962","sp|F4HXQ7|MYOB1_ARATH Myosin-binding protein 1 OS=Arabidopsis thaliana GN=MYOB1 PE=1 SV=1//1.97544e-12",244891949,244894258,"-",49461,"upstream"]
["chr1","LNC_000777","XLOC_008002","lncRNA",245821149,245821459,"-","Zm00001d032989_T004","Zm00001d032989","sp|A3C4N5|PP2A4_ORYSJ Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2//2.75451e-06",245837747,245855929,"+",16287,"upstream"]
["chr1","LNC_000772","XLOC_007978","lncRNA",244169775,244170914,"-","Zm00001d032944_T001","Zm00001d032944","sp|Q8L607|SIN2_ARATH Short integuments 2, mitochondrial OS=Arabidopsis thaliana GN=SIN2 PE=1 SV=1//9.75102e-163",244267423,244291732,"+",96508,"upstream"]
["chr6","LNC_004286","XLOC_043426","lncRNA",169353228,169353810,"+","Zm00001d039062_T020","Zm00001d039062","sp|Q9UNS1|TIM_HUMAN Protein timeless homolog OS=Homo sapiens GN=TIMELESS PE=1 SV=2//9.96381e-12",169452401,169464523,"-",98590,"downstream"]
["chr4","LNC_003147","XLOC_031397","lncRNA",37106645,37107003,"-","Zm00001d049605_T017","Zm00001d049605","sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana GN=CLSY3 PE=1 SV=1//4.43389e-76",37186195,37193126,"+",79191,"upstream"]
["chr4","LNC_003142","XLOC_031313","lncRNA",29876861,29878145,"-","Zm00001d049418_T001","Zm00001d049418","sp|Q2QXJ0|GL124_ORYSJ Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2//3.99957e-130",29894576,29895967,"-",16430,"downstream"]
["chr4","LNC_003140","XLOC_031269","lncRNA",27319945,27320200,"-","Zm00001d049348_T010","Zm00001d049348","sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3//1.5511e-22",27365147,27374442,"-",44946,"downstream"]
["chr4","LNC_003141","XLOC_031305","lncRNA",29533131,29534639,"-","Zm00001d049403_T045","Zm00001d049403","sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2//3.63194e-60",29513536,29516652,"-",16478,"upstream"]
["chr4","LNC_003148","XLOC_031399","lncRNA",37246629,37247075,"-","Zm00001d049605_T002","Zm00001d049605","sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana GN=CLSY3 PE=1 SV=1//4.43389e-76",37186170,37192796,"+",53832,"downstream"]
["chr4","LNC_003149","XLOC_031401","lncRNA",37257088,37257488,"-","Zm00001d049605_T001","Zm00001d049605","sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana GN=CLSY3 PE=1 SV=1//4.43389e-76",37186170,37192796,"+",64291,"downstream"]
["chr1","LNC_000487","XLOC_005387","lncRNA",39092859,39093198,"-","Zm00001d028558_T001","Zm00001d028558",null,39099230,39105322,"+",6031,"upstream"]
["chr1","LNC_000487","XLOC_005387","lncRNA",39092859,39093198,"-","Zm00001d028560_T012","Zm00001d028560","sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1//1.47652e-38",39155167,39163686,"+",61968,"upstream"]
["chr1","LNC_000481","XLOC_005296","lncRNA",32429731,32430116,"-","Zm00001d028372_T004","Zm00001d028372","sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1//4.11735e-21",32433751,32442505,"-",3634,"downstream"]
["chr3","LNC_002439","XLOC_024251","lncRNA",233750457,233750829,"+","Zm00001d044641_T008","Zm00001d044641","sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium discoideum GN=grwd1 PE=3 SV=1//7.14616e-10",233850210,233854436,"+",99380,"upstream"]
["chr3","LNC_002434","XLOC_024162","lncRNA",229749123,229749396,"+","Zm00001d044496_T003","Zm00001d044496","sp|Q0WVV0|PPR31_ARATH Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2 SV=1//2.23796e-53",229673722,229695544,"-",53578,"upstream"]
["chr3","LNC_002434","XLOC_024162","lncRNA",229749123,229749396,"+","Zm00001d044494_T028","Zm00001d044494","sp|F4I839|PAE2_ARATH Pectin acetylesterase 2 OS=Arabidopsis thaliana GN=PAE2 PE=2 SV=1//3.40745e-32",229642160,229650786,"-",98336,"upstream"]
["chr3","LNC_002436","XLOC_024212","lncRNA",232208193,232208406,"+","Zm00001d044573_T003","Zm00001d044573","sp|B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana GN=PRP40A PE=1 SV=1//0",232092155,232119573,"+",88619,"downstream"]
["chr3","LNC_002431","XLOC_024125","lncRNA",227722433,227722708,"+","Zm00001d044432_T014","Zm00001d044432","sp|Q9FUY2|LEUNG_ARATH Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2//2.71512e-44",227759351,227766183,"-",36642,"downstream"]
["chr3","LNC_002433","XLOC_024138","lncRNA",228380955,228381230,"+","Zm00001d044447_T005","Zm00001d044447","sp|Q9LS39|CCR4C_ARATH Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2//1.97763e-90",228319664,228351900,"-",29054,"upstream"]
["chr6","LNC_004288","XLOC_043435","lncRNA",169468728,169470104,"+","Zm00001d039066_T001","Zm00001d039066","sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1//1.30683e-06",169497057,169501065,"+",26952,"upstream"]
["chr6","LNC_004288","XLOC_043435","lncRNA",169468728,169470104,"+","Zm00001d039072_T037","Zm00001d039072","sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2//6.23437e-104",169545980,169552596,"-",75875,"downstream"]
["chr6","LNC_004289","XLOC_043435","lncRNA",169468728,169470104,"+","Zm00001d039072_T036","Zm00001d039072","sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2//6.23437e-104",169545093,169552599,"-",74988,"downstream"]
["chr6","LNC_004258","XLOC_042925","lncRNA",149961909,149962116,"+","Zm00001d038163_T020","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",150029630,150035234,"+",67513,"upstream"]
["chr6","LNC_004256","XLOC_042910","lncRNA",148559853,148560450,"+","Zm00001d038121_T001","Zm00001d038121","sp|Q8L735|ISOA2_ARATH Isoamylase 2, chloroplastic OS=Arabidopsis thaliana GN=ISA2 PE=1 SV=2//0",148612409,148616179,"-",51958,"downstream"]
["chr6","LNC_004255","XLOC_042903","lncRNA",148063847,148064073,"+","Zm00001d038106_T013","Zm00001d038106","sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2//4.14426e-33",148080760,148096154,"-",16686,"downstream"]
["chr6","LNC_004251","XLOC_042799","lncRNA",141428342,141428573,"+","Zm00001d037897_T002","Zm00001d037897",null,141442351,141445588,"-",13777,"downstream"]
["chr6","LNC_004250","XLOC_042797","lncRNA",141412027,141412330,"+","Zm00001d037898_T008","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",141447175,141450195,"-",34844,"downstream"]
["chr5","LNC_003708","XLOC_037460","lncRNA",217370344,217370925,"+","Zm00001d018243_T003","Zm00001d018243","sp|Q6YZ54|RFC3_ORYSJ Replication factor C subunit 3 OS=Oryza sativa subsp. japonica GN=RFC3 PE=2 SV=1//0",217270083,217272588,"-",97755,"upstream"]
["chr5","LNC_003709","XLOC_037516","lncRNA",218858090,218858392,"+","Zm00001d018345_T011","Zm00001d018345","sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1//1.78132e-48",218950569,218954692,"+",92176,"upstream"]
["chr5","LNC_003706","XLOC_037415","lncRNA",215593380,215596067,"+","Zm00001d018147_T001","Zm00001d018147","sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic OS=Arabidopsis thaliana GN=At4g39280 PE=2 SV=3//0",215514651,215519823,"+",73556,"downstream"]
["chr5","LNC_003707","XLOC_037441","lncRNA",216618898,216619187,"+","Zm00001d018206_T001","Zm00001d018206","sp|P27968|NIA7_HORVU Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1//1.99709e-73",216589277,216592402,"-",26495,"upstream"]
["chr5","LNC_003701","XLOC_037373","lncRNA",213967249,213967562,"+","Zm00001d018091_T001","Zm00001d018091","sp|Q43814|OTC_PEA Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1//2.0209e-08",214047482,214049616,"-",79919,"downstream"]
["chr5","LNC_003449","XLOC_034670","lncRNA",15039072,15041135,"+","Zm00001d013599_T018","Zm00001d013599","sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1 OS=Arabidopsis thaliana GN=PAPS1 PE=1 SV=1//0",15110521,15119676,"-",69385,"downstream"]
["chr5","LNC_003448","XLOC_034650","lncRNA",14454932,14456058,"+","Zm00001d013566_T002","Zm00001d013566",null,14436596,14439664,"+",15267,"downstream"]
["chr5","LNC_003441","XLOC_034606","lncRNA",12880650,12880940,"+","Zm00001d013499_T014","Zm00001d013499","sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana GN=At2g40090 PE=2 SV=2//4.82906e-30",12903116,12910346,"+",22175,"upstream"]
["chr5","LNC_003441","XLOC_034606","lncRNA",12880650,12880940,"+","Zm00001d013496_T007","Zm00001d013496","sp|Q9NUN7|ACER3_HUMAN Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=1 SV=3//5.06451e-14",12780074,12785147,"+",95502,"downstream"]
["chr5","LNC_003446","XLOC_034640","lncRNA",14170189,14170634,"+","Zm00001d013557_T001","Zm00001d013557","sp|Q8VWF6|SSL3_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana GN=SSL3 PE=2 SV=1//3.58655e-10",14232577,14235696,"+",61942,"upstream"]
["chr9","LNC_005667","XLOC_056795","lncRNA",4584879,4585549,"+","Zm00001d044838_T002","Zm00001d044838","sp|Q9S7V4|HA22A_ARATH HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1//4.89036e-49",4681922,4687585,"+",96372,"upstream"]
["chr9","LNC_005661","XLOC_056765","lncRNA",2230071,2230356,"+","Zm00001d044780_T003","Zm00001d044780","sp|Q4R380|DPOLL_MACFA DNA polymerase lambda OS=Macaca fascicularis GN=POLL PE=2 SV=1//4.85356e-63",2209296,2210313,"+",19757,"downstream"]
["chr9","LNC_005668","XLOC_056832","lncRNA",6871429,6872873,"+","Zm00001d044903_T006","Zm00001d044903","sp|Q9FKP4|KCA2_ARATH Kinesin-like protein KCA2 OS=Arabidopsis thaliana GN=KCA2 PE=1 SV=1//2.49031e-170",6772833,6796591,"-",74837,"upstream"]
["chr9","LNC_005668","XLOC_056832","lncRNA",6871429,6872873,"+","Zm00001d044907_T002","Zm00001d044907",null,6897020,6904501,"-",24146,"downstream"]
["chr9","LNC_006086","XLOC_060492","lncRNA",112019013,112028341,"-","Zm00001d046939_T001","Zm00001d046939","sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1//8.78973e-63",111943117,111948924,"-",70088,"upstream"]
["chr6","LNC_004538","XLOC_045369","lncRNA",141920894,141921327,"-","Zm00001d037917_T001","Zm00001d037917","sp|Q75AB6|NOP16_ASHGO Nucleolar protein 16 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOP16 PE=3 SV=1//4.74789e-06",141963393,141966135,"+",42065,"upstream"]
["chr6","LNC_004531","XLOC_045325","lncRNA",139473953,139474251,"-","Zm00001d037846_T005","Zm00001d037846","sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens GN=RNFT2 PE=2 SV=2//1.496e-19",139569223,139584128,"+",94971,"upstream"]
["chr6","LNC_004534","XLOC_045346","lncRNA",141315984,141316201,"-","Zm00001d037894_T001","Zm00001d037894","sp|P12950|DHN1_MAIZE Dehydrin DHN1 OS=Zea mays GN=DHN1 PE=1 SV=2//5.75723e-28",141324495,141325549,"-",8293,"downstream"]
["chr1","LNC_000545","XLOC_006038","lncRNA",83941035,83941416,"-","Zm00001d029719_T005","Zm00001d029719","sp|O23702|CTBP_ARATH C-terminal binding protein AN OS=Arabidopsis thaliana GN=AN PE=1 SV=1//0",84025783,84028722,"+",84366,"upstream"]
["chr5","LNC_003938","XLOC_040065","lncRNA",182421830,182422088,"-","Zm00001d016999_T006","Zm00001d016999",null,182342451,182345961,"-",75868,"upstream"]
["chr5","LNC_003931","XLOC_039965","lncRNA",176774242,176774473,"-","Zm00001d016805_T001","Zm00001d016805","sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1//1.88304e-28",176720309,176723469,"-",50772,"upstream"]
["chr5","LNC_003937","XLOC_040059","lncRNA",182159366,182160210,"-","Zm00001d016993_T013","Zm00001d016993","sp|Q6EUN0|ASCL1_ORYSJ ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1//3.80797e-20",182189162,182194042,"-",28951,"downstream"]
["chr5","LNC_003936","XLOC_040047","lncRNA",181283802,181284035,"-","Zm00001d016957_T003","Zm00001d016957","sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2//1.10349e-138",181259012,181273855,"+",9946,"downstream"]
["chr5","LNC_003775","XLOC_038414","lncRNA",35863230,35863747,"-","Zm00001d014192_T001","Zm00001d014192","sp|Q0J709|UP12_ORYSJ ACT domain-containing protein DS12, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0242700 PE=3 SV=2//2.29637e-131",35784865,35788510,"-",74719,"upstream"]
["chr1","LNC_000428","XLOC_004680","lncRNA",152654,156020,"-","Zm00001d027245_T001","Zm00001d027245","sp|Q9H611|PIF1_HUMAN ATP-dependent DNA helicase PIF1 OS=Homo sapiens GN=PIF1 PE=1 SV=2//7.9615e-10",225862,243688,"+",69841,"upstream"]
["chr2","LNC_001391","XLOC_013968","lncRNA",18077262,18077472,"+","Zm00001d002650_T016","Zm00001d002650","sp|Q7XSA2|AGO1B_ORYSJ Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3//0",18176680,18185173,"+",99207,"upstream"]
["chr2","LNC_001391","XLOC_013968","lncRNA",18077262,18077472,"+","Zm00001d002644_T046","Zm00001d002644","sp|Q8BKN5|GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2 SV=2//3.01411e-07",17990229,18025944,"+",51317,"downstream"]
["chr2","LNC_001393","XLOC_013971","lncRNA",18123410,18123715,"+","Zm00001d002644_T030","Zm00001d002644","sp|Q8BKN5|GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2 SV=2//3.01411e-07",17990172,18026177,"+",97232,"downstream"]
["chr2","LNC_001393","XLOC_013971","lncRNA",18123410,18123715,"+","Zm00001d002650_T062","Zm00001d002650","sp|Q7XSA2|AGO1B_ORYSJ Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3//0",18178280,18185118,"+",54564,"upstream"]
["chr2","LNC_001392","XLOC_013970","lncRNA",18089931,18091745,"+","Zm00001d002644_T001","Zm00001d002644","sp|Q8BKN5|GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2 SV=2//3.01411e-07",17989991,18025168,"+",64762,"downstream"]
["chr2","LNC_001394","XLOC_014000","lncRNA",19415528,19415868,"+","Zm00001d002695_T013","Zm00001d002695",null,19448743,19453935,"+",32874,"upstream"]
["chr2","LNC_001396","XLOC_014017","lncRNA",20494960,20495351,"+","Zm00001d002726_T010","Zm00001d002726","sp|Q8LPF3|PME68_ARATH Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1//3.26806e-33",20520140,20522114,"+",24788,"upstream"]
["chr5","LNC_003779","XLOC_038463","lncRNA",40089189,40098606,"-","Zm00001d014297_T020","Zm00001d014297","sp|Q9C5U2|AHK2_ARATH Histidine kinase 2 OS=Arabidopsis thaliana GN=AHK2 PE=1 SV=1//6.33576e-70",40029927,40049929,"+",39259,"downstream"]
["chr1","LNC_000421","XLOC_004594","lncRNA",303186757,303186980,"+","Zm00001d034828_T002","Zm00001d034828","sp|P74142|RS1B_SYNY3 30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1b PE=3 SV=1//1.30499e-13",303240120,303243318,"-",53139,"downstream"]
["chr7","LNC_004704","XLOC_047115","lncRNA",83919294,83920987,"+","Zm00001d019998_T001","Zm00001d019998","sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1//2.32089e-15",83905784,83907809,"-",11484,"upstream"]
["chr1","LNC_000425","XLOC_004654","lncRNA",305860598,305860827,"+","Zm00001d034929_T004","Zm00001d034929","sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana GN=LUH PE=1 SV=1//1.93944e-07",305907516,305921086,"+",46688,"upstream"]
["chr1","LNC_000847","XLOC_008703","lncRNA",285477993,285479380,"-","Zm00001d034161_T011","Zm00001d034161","sp|Q7Y0B9|SAPK8_ORYSJ Serine/threonine-protein kinase SAPK8 OS=Oryza sativa subsp. japonica GN=SAPK8 PE=2 SV=1//3.19452e-11",285417604,285425390,"+",52602,"downstream"]
["chr1","LNC_000842","XLOC_008674","lncRNA",284061317,284062064,"-","Zm00001d034097_T001","Zm00001d034097","sp|Q6WNQ8|C81E8_MEDTR Cytochrome P450 81E8 OS=Medicago truncatula GN=CYP81E8 PE=2 SV=1//3.38834e-14",283965374,283967072,"+",94244,"downstream"]
["chr1","LNC_000266","XLOC_002718","lncRNA",198467040,198467286,"+","Zm00001d031678_T024","Zm00001d031678","sp|Q3LXA7|RBR3_MAIZE Retinoblastoma-related protein 3 OS=Zea mays GN=RBR3 PE=2 SV=1//0",198531882,198537875,"-",64595,"downstream"]
["chr1","LNC_000266","XLOC_002718","lncRNA",198467040,198467286,"+","Zm00001d031678_T011","Zm00001d031678","sp|Q3LXA7|RBR3_MAIZE Retinoblastoma-related protein 3 OS=Zea mays GN=RBR3 PE=2 SV=1//0",198531749,198538490,"-",64462,"downstream"]
["chr1","LNC_000715","XLOC_007362","lncRNA",205065285,205067125,"-","Zm00001d031874_T001","Zm00001d031874",null,205070844,205071236,"+",3718,"upstream"]
["chr1","LNC_000710","XLOC_007277","lncRNA",199522809,199523590,"-","Zm00001d031724_T045","Zm00001d031724","sp|Q8GU82|AB45G_ORYSJ ABC transporter G family member 45 OS=Oryza sativa subsp. japonica GN=ABCG45 PE=2 SV=2//0",199521789,199525512,"+",-782,"antisense"]
["chr3","LNC_002571","XLOC_025437","lncRNA",95608044,95608880,"-","Zm00001d041077_T001","Zm00001d041077","sp|Q2QTL0|NADA_ORYSJ Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0290150 PE=3 SV=2//8.38525e-134",95600395,95603031,"-",5012,"upstream"]
["chr3","LNC_002576","XLOC_025446","lncRNA",96270041,96270250,"-","Zm00001d041083_T022","Zm00001d041083","sp|Q6PIW4|FIGL1_HUMAN Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2//7.89232e-108",96133707,96171262,"-",98778,"upstream"]
["chr4","LNC_003162","XLOC_031480","lncRNA",41769896,41771136,"-","Zm00001d049729_T010","Zm00001d049729","sp|Q0VCZ3|YTHD2_BOVIN YTH domain-containing family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1//3.72533e-48",41732902,41735939,"+",33956,"downstream"]
["chr4","LNC_003164","XLOC_031514","lncRNA",44704375,44705809,"-","Zm00001d049787_T004","Zm00001d049787",null,44680196,44685802,"-",18572,"upstream"]
["chr3","LNC_002417","XLOC_024008","lncRNA",222991415,222991789,"+","Zm00001d044254_T002","Zm00001d044254",null,223085735,223089594,"-",93945,"downstream"]
["chr3","LNC_002415","XLOC_023959","lncRNA",220779690,220782316,"+","Zm00001d044165_T001","Zm00001d044165","sp|O64827|SUVR5_ARATH Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis thaliana GN=SUVR5 PE=1 SV=3//3.1265e-42",220866334,220869620,"+",84017,"upstream"]
["chr3","LNC_002414","XLOC_023932","lncRNA",219938817,219939300,"+","Zm00001d044129_T018","Zm00001d044129","sp|P55241|GLGL1_MAIZE Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1//7.41739e-11",219979963,219986314,"-",40662,"downstream"]
["chr3","LNC_002413","XLOC_023929","lncRNA",219922538,219922815,"+","Zm00001d044127_T020","Zm00001d044127","sp|Q8VZ79|IDN2_ARATH Protein INVOLVED IN DE NOVO 2 OS=Arabidopsis thaliana GN=IDN2 PE=1 SV=1//7.012e-12",219916918,219919749,"-",2788,"upstream"]
["chr3","LNC_002412","XLOC_023896","lncRNA",217983372,217983628,"+","Zm00001d044056_T005","Zm00001d044056","sp|P0C550|AKT1_ORYSI Potassium channel AKT1 OS=Oryza sativa subsp. indica GN=AKT1 PE=2 SV=1//0",218044225,218050489,"+",60596,"upstream"]
["chr3","LNC_002411","XLOC_023882","lncRNA",217323611,217323928,"+","Zm00001d044032_T001","Zm00001d044032","sp|B1Q3J6|DNM1B_ORYSJ DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B PE=2 SV=1//7.32205e-28",217270503,217273511,"-",50099,"upstream"]
["chr10","LNC_001009","XLOC_010257","lncRNA",100674098,100674377,"+","Zm00001d025034_T001","Zm00001d025034","sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1//2.89337e-19",100648946,100657147,"-",16950,"upstream"]
["chr10","LNC_001003","XLOC_010188","lncRNA",95516404,95520063,"+","Zm00001d024933_T002","Zm00001d024933","sp|Q8LF05|RBL19_ARATH Rhomboid-like protein 19 OS=Arabidopsis thaliana GN=RBL19 PE=2 SV=1//1.09539e-25",95587713,95593434,"+",67649,"upstream"]
["chr10","LNC_001007","XLOC_010214","lncRNA",97085801,97086345,"+","Zm00001d024965_T003","Zm00001d024965","sp|F4IBB2|PGML2_ARATH Phosphoglycerate mutase-like protein 2 OS=Arabidopsis thaliana GN=At1g58280 PE=2 SV=1//2.80001e-30",97101650,97106762,"-",15304,"downstream"]
["chr10","LNC_001145","XLOC_011526","lncRNA",13303023,13304366,"-","Zm00001d023640_T002","Zm00001d023640","sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=1 SV=2//2.68395e-47",13316511,13341556,"-",12144,"downstream"]
["chr10","LNC_001141","XLOC_011454","lncRNA",8697913,8698152,"-","Zm00001d023521_T005","Zm00001d023521","sp|Q641I1|F135B_XENLA Protein FAM135B OS=Xenopus laevis GN=fam135b PE=2 SV=1//3.13506e-10",8654429,8659904,"+",38008,"downstream"]
["chr10","LNC_001141","XLOC_011454","lncRNA",8697913,8698152,"-","Zm00001d023520_T019","Zm00001d023520","sp|Q6PFM9|WDR48_DANRE WD repeat-containing protein 48 OS=Danio rerio GN=wdr48 PE=2 SV=2//2.94176e-11",8645843,8650054,"+",47858,"downstream"]
["chr7","LNC_005060","XLOC_050760","lncRNA",167868738,167869293,"-","Zm00001d022000_T033","Zm00001d022000","sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3//1.92262e-13",167788997,167792604,"+",76133,"downstream"]
["chr7","LNC_005060","XLOC_050760","lncRNA",167868738,167869293,"-","Zm00001d022000_T027","Zm00001d022000","sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3//1.92262e-13",167788982,167798174,"+",70563,"downstream"]
["chr5","LNC_003894","XLOC_039556","lncRNA",144559944,144560268,"-","Zm00001d016101_T006","Zm00001d016101","sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2//9.25427e-73",144566422,144572408,"-",6153,"downstream"]
["chr5","LNC_003892","XLOC_039547","lncRNA",143426750,143427007,"-","Zm00001d016080_T008","Zm00001d016080","sp|Q9ZUU4|CP29B_ARATH RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana GN=CP29B PE=1 SV=1//3.64283e-07",143350647,143354106,"+",72643,"downstream"]
["chr5","LNC_003762","XLOC_038278","lncRNA",26579297,26579833,"-","Zm00001d013967_T017","Zm00001d013967","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//2.16833e-26",26610158,26621133,"-",30324,"downstream"]
["chr5","LNC_003760","XLOC_038257","lncRNA",25172706,25172942,"-","Zm00001d013933_T001","Zm00001d013933","sp|Q84WQ5|CBSX5_ARATH CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana GN=CBSX5 PE=2 SV=2//3.59669e-32",25177803,25179923,"-",4860,"downstream"]
["chr8","LNC_005391","XLOC_054331","lncRNA",18605116,18610997,"-","Zm00001d008738_T001","Zm00001d008738","sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2//2.19971e-12",18539420,18548639,"-",56476,"upstream"]
["chr8","LNC_005392","XLOC_054346","lncRNA",19533094,19533367,"-","Zm00001d008763_T004","Zm00001d008763","sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana GN=ATX2 PE=2 SV=1//7.92345e-07",19448415,19456400,"+",76693,"downstream"]
["chr8","LNC_005399","XLOC_054392","lncRNA",21819592,21819884,"-","Zm00001d008826_T130","Zm00001d008826","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//0",21787340,21793720,"-",25871,"upstream"]
["chr8","LNC_005399","XLOC_054392","lncRNA",21819592,21819884,"-","Zm00001d008824_T001","Zm00001d008824",null,21740739,21742287,"-",77304,"upstream"]
["chr8","LNC_005398","XLOC_054391","lncRNA",21817045,21817349,"-","Zm00001d008826_T033","Zm00001d008826","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//0",21787288,21795407,"-",21637,"upstream"]
["chr8","LNC_005398","XLOC_054391","lncRNA",21817045,21817349,"-","Zm00001d008826_T085","Zm00001d008826","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//0",21787290,21795409,"-",21635,"upstream"]
["chr5","LNC_003428","XLOC_034418","lncRNA",5466301,5466635,"+","Zm00001d013159_T001","Zm00001d013159","sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1//9.68251e-13",5560312,5563194,"-",93676,"downstream"]
["chr5","LNC_003425","XLOC_034343","lncRNA",3245034,3245350,"+","Zm00001d013019_T011","Zm00001d013019","sp|Q8RXF8|MIRO1_ARATH Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana GN=MIRO1 PE=1 SV=1//3.91194e-06",3281525,3292688,"+",36174,"upstream"]
["chr5","LNC_003425","XLOC_034343","lncRNA",3245034,3245350,"+","Zm00001d013006_T001","Zm00001d013006","sp|Q7XZF7|GYRA_ORYSJ Probable DNA gyrase subunit A, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=GYRA PE=2 SV=2//4.49098e-32",3132563,3148442,"+",96591,"downstream"]
["chr5","LNC_003424","XLOC_034321","lncRNA",2628676,2629230,"+","Zm00001d012979_T004","Zm00001d012979","sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2//1.0757e-176",2666434,2669377,"+",37203,"upstream"]
["chr5","LNC_003424","XLOC_034321","lncRNA",2628676,2629230,"+","Zm00001d012971_T005","Zm00001d012971","sp|P42211|ASPRX_ORYSJ Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2//8.76869e-35",2560596,2567454,"+",61221,"downstream"]
["chr5","LNC_003427","XLOC_034409","lncRNA",5233818,5234997,"+","Zm00001d013127_T003","Zm00001d013127","sp|Q940Q3|ZTP29_ARATH Zinc transporter ZTP29 OS=Arabidopsis thaliana GN=ZTP29 PE=2 SV=1//2.6247e-78",5181668,5187630,"+",46187,"downstream"]
["chr5","LNC_003421","XLOC_034240","lncRNA",966249,967183,"+","Zm00001d012821_T013","Zm00001d012821","sp|Q8RY59|RCD1_ARATH Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana GN=RCD1 PE=1 SV=1//4.09692e-68",900797,904097,"+",62151,"downstream"]
["chr5","LNC_003421","XLOC_034240","lncRNA",966249,967183,"+","Zm00001d012821_T009","Zm00001d012821","sp|Q8RY59|RCD1_ARATH Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana GN=RCD1 PE=1 SV=1//4.09692e-68",899141,904106,"+",62142,"downstream"]
["chr5","LNC_003423","XLOC_034301","lncRNA",2248793,2249102,"+","Zm00001d012943_T001","Zm00001d012943","sp|Q84JU6|HOS1_ARATH E3 ubiquitin-protein ligase HOS1 OS=Arabidopsis thaliana GN=HOS1 PE=1 SV=1//4.08074e-39",2286794,2296592,"-",37691,"downstream"]
["chr5","LNC_003423","XLOC_034301","lncRNA",2248793,2249102,"+","Zm00001d012950_T002","Zm00001d012950","sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis thaliana GN=ULP1B PE=5 SV=2//9.87153e-07",2318179,2321681,"+",69076,"upstream"]
["chr5","LNC_003422","XLOC_034263","lncRNA",1461345,1461681,"+","Zm00001d012869_T030","Zm00001d012869","sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1//3.14677e-18",1392007,1397915,"+",63429,"downstream"]
["chr8","LNC_005648","XLOC_056582","lncRNA",176849381,176850150,"-","Zm00001d012567_T002","Zm00001d012567","sp|Q8S2G5|GPDH2_ORYSJ Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic OS=Oryza sativa subsp. japonica GN=Os01g0801600 PE=2 SV=1//0",176775850,176779233,"+",70147,"downstream"]
["chr8","LNC_005646","XLOC_056568","lncRNA",176441793,176442238,"-","Zm00001d012552_T007","Zm00001d012552","sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1//0",176492064,176493907,"-",49825,"downstream"]
["chr8","LNC_005646","XLOC_056568","lncRNA",176441793,176442238,"-","Zm00001d012548_T001","Zm00001d012548",null,176464315,176465577,"+",22076,"upstream"]
["chr8","LNC_005645","XLOC_056561","lncRNA",176152557,176152931,"-","Zm00001d012525_T052","Zm00001d012525","sp|Q5N749|MOR1_ORYSJ Protein MOR1 OS=Oryza sativa subsp. japonica GN=MOR1 PE=2 SV=1//0",176068978,176095750,"+",56806,"downstream"]
["chr8","LNC_005644","XLOC_056498","lncRNA",174323689,174323922,"-","Zm00001d012421_T004","Zm00001d012421","sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1//4.07334e-84",174231620,174235405,"+",88283,"downstream"]
["chr8","LNC_005644","XLOC_056498","lncRNA",174323689,174323922,"-","Zm00001d012429_T002","Zm00001d012429","sp|Q56XM9|PAPS3_ARATH Nuclear poly(A) polymerase 3 OS=Arabidopsis thaliana GN=PAPS3 PE=1 SV=1//1.45548e-17",174355901,174357929,"-",31978,"downstream"]
["chr8","LNC_005641","XLOC_056426","lncRNA",172340805,172341029,"-","Zm00001d012320_T003","Zm00001d012320","sp|Q5N897|CDC6_ORYSJ Cell division control protein 6 homolog OS=Oryza sativa subsp. japonica GN=CDC6 PE=2 SV=1//3.34483e-45",172365761,172367117,"-",24731,"downstream"]
["chr8","LNC_005641","XLOC_056426","lncRNA",172340805,172341029,"-","Zm00001d012322_T002","Zm00001d012322","sp|P93147|C81E1_GLYEC Isoflavone 2&apos;-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2//2.81505e-119",172403444,172405357,"-",62414,"downstream"]
["chr3","LNC_002385","XLOC_023617","lncRNA",203759142,203759404,"+","Zm00001d043555_T003","Zm00001d043555","sp|Q04903|FNTB_PEA Protein farnesyltransferase subunit beta OS=Pisum sativum GN=FTB PE=1 SV=1//5.79056e-147",203745054,203749119,"-",10022,"upstream"]
["chr3","LNC_002382","XLOC_023590","lncRNA",202421191,202421394,"+","Zm00001d043506_T001","Zm00001d043506","sp|Q56AP7|CRBN_RAT Protein cereblon OS=Rattus norvegicus GN=Crbn PE=1 SV=1//1.54793e-11",202317801,202324107,"+",97083,"downstream"]
["chr3","LNC_002381","XLOC_023589","lncRNA",202396941,202397517,"+","Zm00001d043512_T001","Zm00001d043512","sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1//9.76259e-177",202361988,202365947,"-",30993,"upstream"]
["chr3","LNC_002380","XLOC_023588","lncRNA",202396203,202396725,"+","Zm00001d043506_T011","Zm00001d043506","sp|Q56AP7|CRBN_RAT Protein cereblon OS=Rattus norvegicus GN=Crbn PE=1 SV=1//1.54793e-11",202317856,202324194,"+",72008,"downstream"]
["chr3","LNC_002389","XLOC_023663","lncRNA",205487243,205489561,"+","Zm00001d000687_T001","Zm00001d000687",null,205435620,205435827,"+",51415,"downstream"]
["chr4","LNC_003396","XLOC_033924","lncRNA",236212262,236212713,"-","Zm00001d053609_T008","Zm00001d053609","sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta&apos;-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1//3.44292e-10",236276825,236286878,"+",64111,"upstream"]
["chr4","LNC_003396","XLOC_033924","lncRNA",236212262,236212713,"-","Zm00001d053609_T060","Zm00001d053609","sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta&apos;-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1//3.44292e-10",236276883,236286900,"+",64169,"upstream"]
["chr4","LNC_003395","XLOC_033919","lncRNA",235905689,235905918,"-","Zm00001d053595_T005","Zm00001d053595","sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1//3.55105e-35",235825807,235832647,"-",73041,"upstream"]
["chr4","LNC_003394","XLOC_033901","lncRNA",234926328,234926564,"-","Zm00001d053575_T012","Zm00001d053575","sp|Q9FPR3|EDR1_ARATH Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1//1.20125e-07",234977053,234980618,"+",50488,"upstream"]
["chr9","LNC_006063","XLOC_060273","lncRNA",94635121,94635360,"-","Zm00001d046538_T003","Zm00001d046538","sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2//4.80706e-10",94662146,94667640,"-",26785,"downstream"]
["chr9","LNC_006066","XLOC_060299","lncRNA",97439166,97439492,"-","Zm00001d046587_T002","Zm00001d046587","sp|O14053|UTP21_SCHPO U3 small nucleolar RNA-associated protein 21 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1672.07 PE=3 SV=1//4.14765e-39",97428880,97438298,"-",867,"upstream"]
["chr9","LNC_006068","XLOC_060335","lncRNA",101099937,101100171,"-","Zm00001d046664_T001","Zm00001d046664",null,101174444,101175007,"-",74272,"downstream"]
["chr6","LNC_004514","XLOC_045169","lncRNA",130410490,130410702,"-","Zm00001d037579_T003","Zm00001d037579","sp|Q6INN7|PP4R3_XENLA Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus laevis GN=smek1 PE=2 SV=1//7.18391e-41",130341849,130351643,"-",58846,"upstream"]
["chr7","LNC_005005","XLOC_050047","lncRNA",133907487,133907808,"-","Zm00001d020814_T003","Zm00001d020814","sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2//1.76925e-69",133809772,133821908,"+",85578,"downstream"]
["chr7","LNC_005004","XLOC_050044","lncRNA",133744759,133745088,"-","Zm00001d020814_T002","Zm00001d020814","sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2//1.76925e-69",133809772,133821908,"+",64683,"upstream"]
["chr7","LNC_005000","XLOC_050007","lncRNA",130435572,130435869,"-","Zm00001d020727_T001","Zm00001d020727","sp|Q24K16|ZADH2_BOVIN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1//7.00939e-24",130345805,130357807,"+",77764,"downstream"]
["chr7","LNC_005008","XLOC_050075","lncRNA",135311806,135312036,"-","Zm00001d020881_T005","Zm00001d020881","sp|Q9FG77|WRKY2_ARATH Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1//1.51007e-13",135317347,135321114,"-",5310,"downstream"]
["chr5","LNC_003959","XLOC_040228","lncRNA",191180270,191180544,"-","Zm00001d017271_T008","Zm00001d017271","sp|Q9SF85|ADK1_ARATH Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1//2.05119e-22",191255091,191260688,"-",74546,"downstream"]
["chr5","LNC_003956","XLOC_040204","lncRNA",189411160,189412151,"-","Zm00001d017222_T001","Zm00001d017222","sp|Q38859|NRPBB_ARATH DNA-directed RNA polymerases II, IV and V subunit 11 OS=Arabidopsis thaliana GN=NRPB11 PE=1 SV=1//1.33459e-58",189363122,189366871,"+",44288,"downstream"]
["chr5","LNC_003950","XLOC_040135","lncRNA",186211122,186211652,"-","Zm00001d017125_T004","Zm00001d017125","sp|Q5ZIJ9|MIB2_CHICK E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus GN=MIB2 PE=2 SV=1//1.81453e-17",186172396,186176923,"+",34198,"downstream"]
["chr3","LNC_002601","XLOC_025638","lncRNA",118434427,118434714,"-","Zm00001d041420_T011","Zm00001d041420","sp|Q9FWR2|AVPX_ARATH Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=3 SV=1//1.37782e-25",118460920,118468374,"-",26205,"downstream"]
["chr3","LNC_002607","XLOC_025684","lncRNA",123883675,123883888,"-","Zm00001d000600_T001","Zm00001d000600",null,123796644,123796875,"-",86799,"upstream"]
["chr6","LNC_004351","XLOC_043833","lncRNA",24509119,24514842,"-","Zm00001d035405_T005","Zm00001d035405","sp|Q94B78|GCSP1_ARATH Glycine dehydrogenase (decarboxylating) 1, mitochondrial OS=Arabidopsis thaliana GN=GLDP1 PE=1 SV=2//5.13281e-25",24546315,24549334,"-",31472,"downstream"]
["chr6","LNC_004357","XLOC_043833","lncRNA",24509119,24514858,"-","Zm00001d035409_T001","Zm00001d035409",null,24606673,24607624,"-",91814,"downstream"]
["chr2","LNC_001803","XLOC_018001","lncRNA",35884099,35884429,"-","Zm00001d003207_T002","Zm00001d003207","sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana GN=ARI8 PE=2 SV=1//2.3652e-10",35907483,35926286,"-",23053,"downstream"]
["chr2","LNC_001802","XLOC_018000","lncRNA",35820603,35820960,"-","Zm00001d003207_T021","Zm00001d003207","sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana GN=ARI8 PE=2 SV=1//2.3652e-10",35907560,35925957,"-",86599,"downstream"]
["chr7","LNC_004822","XLOC_048230","lncRNA",163052121,163052486,"+","Zm00001d021785_T026","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980608,"-",71512,"upstream"]
["chr7","LNC_004822","XLOC_048230","lncRNA",163052121,163052486,"+","Zm00001d021790_T020","Zm00001d021790","sp|Q0D5G4|Y7633_ORYSJ B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=3 SV=2//2.67977e-57",163070503,163078124,"+",18016,"upstream"]
["chr7","LNC_004727","XLOC_047333","lncRNA",105694995,105696428,"+","Zm00001d020312_T006","Zm00001d020312","sp|D0EL35|CTC1_ARATH CST complex subunit CTC1 OS=Arabidopsis thaliana GN=CTC1 PE=1 SV=2//1.12159e-12",105596746,105606081,"-",88913,"upstream"]
["chr7","LNC_004726","XLOC_047332","lncRNA",105669551,105669796,"+","Zm00001d020312_T009","Zm00001d020312","sp|D0EL35|CTC1_ARATH CST complex subunit CTC1 OS=Arabidopsis thaliana GN=CTC1 PE=1 SV=2//1.12159e-12",105596746,105613201,"-",56349,"upstream"]
["chr9","LNC_005921","XLOC_059197","lncRNA",3807782,3809360,"-","Zm00001d044819_T010","Zm00001d044819","sp|F4HWY6|MYO11_ARATH Myosin-11 OS=Arabidopsis thaliana GN=XI-E PE=3 SV=1//1.31285e-162",3876188,3886789,"-",66827,"downstream"]
["chr1","LNC_000868","XLOC_008950","lncRNA",298642962,298643217,"-","Zm00001d034633_T056","Zm00001d034633",null,298549195,298572907,"-",70054,"upstream"]
["chr1","LNC_000868","XLOC_008950","lncRNA",298642962,298643217,"-","Zm00001d034633_T018","Zm00001d034633",null,298548991,298564027,"-",78934,"upstream"]
["chr1","LNC_000861","XLOC_008877","lncRNA",294023668,294023903,"-","Zm00001d034480_T002","Zm00001d034480","sp|Q84ZT9|WVD2_ARATH Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1//5.58302e-18",294122557,294127776,"+",98653,"upstream"]
["chr1","LNC_000863","XLOC_008882","lncRNA",294513378,294513594,"-","Zm00001d034492_T002","Zm00001d034492","sp|Q7X659|VP35A_ARATH Vacuolar protein sorting-associated protein 35A OS=Arabidopsis thaliana GN=VPS35A PE=1 SV=1//1.28726e-09",294590945,294613712,"+",77350,"upstream"]
["chr1","LNC_000866","XLOC_008901","lncRNA",295376319,295376526,"-","Zm00001d034515_T012","Zm00001d034515",null,295313729,295316270,"-",60048,"upstream"]
["chr1","LNC_000867","XLOC_008906","lncRNA",295639144,295640709,"-","Zm00001d034527_T001","Zm00001d034527",null,295685533,295686417,"+",44823,"upstream"]
["chr9","LNC_005922","XLOC_059218","lncRNA",4298290,4301627,"-","Zm00001d044828_T001","Zm00001d044828","sp|Q9FWA4|GAUT9_ARATH Probable galacturonosyltransferase 9 OS=Arabidopsis thaliana GN=GAUT9 PE=2 SV=1//3.75819e-131",4249799,4253170,"+",45119,"downstream"]
["chr3","LNC_002590","XLOC_025564","lncRNA",110603470,110603801,"-","Zm00001d041290_T002","Zm00001d041290","sp|Q9LW00|MBD11_ARATH Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana GN=MBD11 PE=1 SV=1//2.31907e-23",110647125,110652889,"+",43323,"upstream"]
["chr3","LNC_002597","XLOC_025597","lncRNA",113975673,113975923,"-","Zm00001d041354_T004","Zm00001d041354","sp|F4HW04|DPOE1_ARATH DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana GN=POL2A PE=1 SV=1//1.09691e-73",114021315,114022224,"-",45391,"downstream"]
["chr4","LNC_003188","XLOC_031747","lncRNA",68205937,68206494,"-","Zm00001d050131_T002","Zm00001d050131","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//7.33824e-33",68132589,68156074,"+",49862,"downstream"]
["chrB73V4_ctg75","LNC_006258","XLOC_062077","lncRNA",336027,336420,"+","Zm00001d000153_T007","Zm00001d000153","sp|Q6ZG77|DCDA_ORYSJ Probable diaminopimelate decarboxylase, chloroplastic OS=Oryza sativa subsp. japonica GN=LYSA PE=2 SV=1//8.8289e-48",228577,236070,"+",99956,"downstream"]
["chr10","LNC_001029","XLOC_010418","lncRNA",112370749,112371000,"+","Zm00001d025278_T046","Zm00001d025278","sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2 SV=1//1.05142e-28",112299760,112307602,"+",63146,"downstream"]
["chr10","LNC_001029","XLOC_010418","lncRNA",112370749,112371000,"+","Zm00001d025278_T048","Zm00001d025278","sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2 SV=1//1.05142e-28",112299760,112307605,"+",63143,"downstream"]
["chr6","LNC_004293","XLOC_043456","lncRNA",170068355,170068712,"+","Zm00001d039106_T001","Zm00001d039106","sp|Q9XHS0|RS12_HORVU 40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1//9.63882e-86",170128583,170130300,"-",59870,"downstream"]
["chr6","LNC_004292","XLOC_043442","lncRNA",169639450,169639679,"+","Zm00001d039072_T005","Zm00001d039072","sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2//6.23437e-104",169543363,169552829,"-",86620,"upstream"]
["chr6","LNC_004291","XLOC_043435","lncRNA",169468728,169470373,"+","Zm00001d039072_T004","Zm00001d039072","sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2//6.23437e-104",169543363,169552829,"-",72989,"downstream"]
["chr6","LNC_004291","XLOC_043435","lncRNA",169468728,169470373,"+","Zm00001d039072_T008","Zm00001d039072","sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2//6.23437e-104",169543363,169552829,"-",72989,"downstream"]
["chr6","LNC_004290","XLOC_043435","lncRNA",169468728,169470373,"+","Zm00001d039065_T006","Zm00001d039065","sp|P42775|GBF2_ARATH G-box-binding factor 2 OS=Arabidopsis thaliana GN=GBF2 PE=1 SV=1//8.07252e-13",169491192,169496107,"+",20818,"upstream"]
["chr6","LNC_004297","XLOC_043460","lncRNA",170133127,170134085,"+","Zm00001d039109_T001","Zm00001d039109","sp|Q1PET6|ICML2_ARATH Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2 OS=Arabidopsis thaliana GN=ICMEL2 PE=2 SV=1//3.87577e-34",170146663,170148632,"-",12577,"downstream"]
["chr6","LNC_004295","XLOC_043459","lncRNA",170131057,170132922,"+","Zm00001d039103_T001","Zm00001d039103",null,170106206,170106700,"-",24356,"upstream"]
["chr10","LNC_001128","XLOC_011330","lncRNA",3338540,3338782,"-","Zm00001d023326_T029","Zm00001d023326","sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1//1.79131e-98",3430429,3434999,"-",91646,"downstream"]
["chr10","LNC_001128","XLOC_011330","lncRNA",3338540,3338782,"-","Zm00001d023323_T041","Zm00001d023323","sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1//3.49253e-104",3287820,3292436,"-",46103,"upstream"]
["chr10","LNC_001129","XLOC_011331","lncRNA",3481460,3481840,"-","Zm00001d023326_T002","Zm00001d023326","sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1//1.79131e-98",3428583,3433500,"-",47959,"upstream"]
["chr10","LNC_001129","XLOC_011331","lncRNA",3481460,3481840,"-","Zm00001d023327_T005","Zm00001d023327","sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1//1.56014e-98",3460802,3467018,"-",14441,"upstream"]
["chr10","LNC_001124","XLOC_011280","lncRNA",987479,988181,"-","Zm00001d023229_T001","Zm00001d023229","sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2//1.28723e-08",896443,898875,"+",88603,"downstream"]
["chr10","LNC_001124","XLOC_011280","lncRNA",987479,988181,"-","Zm00001d023230_T047","Zm00001d023230","sp|C7J8E5|RTOR2_ORYSJ Regulatory-associated protein of TOR 2 OS=Oryza sativa subsp. japonica GN=RAPTOR2 PE=2 SV=2//1.51341e-92",955161,966579,"-",20899,"upstream"]
["chr10","LNC_001122","XLOC_011195","lncRNA",149032626,149032843,"+","Zm00001d026621_T034","Zm00001d026621","sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3//5.53627e-66",149084264,149094243,"-",51420,"downstream"]
["chr10","LNC_001123","XLOC_011246","lncRNA",150115330,150115619,"+","Zm00001d026689_T006","Zm00001d026689","sp|C4LK80|BIOWF_CORK4 Biotin biosynthesis bifunctional protein BioWF OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=bioWF PE=3 SV=1//4.98548e-22",150020463,150023661,"+",91668,"downstream"]
["chr10","LNC_001123","XLOC_011246","lncRNA",150115330,150115619,"+","Zm00001d026696_T029","Zm00001d026696","sp|B8ARW2|TNPO1_ORYSI Transportin-1 OS=Oryza sativa subsp. indica GN=OsI_18044 PE=2 SV=1//5.54077e-131",150180058,150198026,"+",64438,"upstream"]
["chr10","LNC_001121","XLOC_011193","lncRNA",148990936,148991742,"+","Zm00001d026621_T028","Zm00001d026621","sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3//5.53627e-66",149084264,149093998,"-",92521,"downstream"]
["chr10","LNC_001121","XLOC_011193","lncRNA",148990936,148991742,"+","Zm00001d026611_T001","Zm00001d026611",null,148923923,148924600,"+",66335,"downstream"]
["chr5","LNC_003741","XLOC_038014","lncRNA",11249326,11249631,"-","Zm00001d013432_T001","Zm00001d013432","sp|Q8S9K3|VAR3_ARATH Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana GN=VAR3 PE=1 SV=2//5.1357e-17",11290299,11293956,"-",40667,"downstream"]
["chr5","LNC_003742","XLOC_038028","lncRNA",12235061,12236013,"-","Zm00001d013468_T003","Zm00001d013468","sp|Q0V865|FAFL_ARATH Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1//8.59433e-15",12327612,12329627,"-",91598,"downstream"]
["chr5","LNC_003744","XLOC_038085","lncRNA",15154557,15154766,"-","Zm00001d013606_T012","Zm00001d013606","sp|P67963|KC1A_XENLA Casein kinase I isoform alpha OS=Xenopus laevis GN=csnk1a1 PE=2 SV=1//9.49567e-44",15246137,15252270,"+",91370,"upstream"]
["chr5","LNC_003744","XLOC_038085","lncRNA",15154557,15154766,"-","Zm00001d013599_T017","Zm00001d013599","sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1 OS=Arabidopsis thaliana GN=PAPS1 PE=1 SV=1//0",15110521,15119654,"-",34902,"upstream"]
["chr1","LNC_000298","XLOC_003099","lncRNA",222175855,222176057,"+","Zm00001d032319_T029","Zm00001d032319","sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3//5.76949e-12",222101366,222107250,"+",68604,"downstream"]
["chr1","LNC_000297","XLOC_003059","lncRNA",219854632,219855001,"+","Zm00001d032267_T002","Zm00001d032267","sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1//2.0141e-43",219821587,219829466,"+",25165,"downstream"]
["chr1","LNC_000293","XLOC_003013","lncRNA",217243004,217243333,"+","Zm00001d032209_T002","Zm00001d032209",null,217181039,217182735,"-",60268,"upstream"]
["chr1","LNC_000290","XLOC_002977","lncRNA",215614911,215615194,"+","Zm00001d022911_T001","Zm00001d022911",null,215589208,215589412,"-",25498,"upstream"]
["chr4","LNC_003407","XLOC_034026","lncRNA",241415279,241416363,"-","Zm00001d053800_T003","Zm00001d053800","sp|O82179|GCSH2_ARATH Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=GDH2 PE=2 SV=1//1.0466e-08",241341757,241343467,"-",71811,"upstream"]
["chr4","LNC_003407","XLOC_034026","lncRNA",241415279,241416363,"-","Zm00001d053799_T005","Zm00001d053799",null,241325640,241338374,"+",76904,"downstream"]
["chr4","LNC_003406","XLOC_034026","lncRNA",241405853,241416363,"-","Zm00001d053803_T001","Zm00001d053803",null,241416859,241440702,"+",495,"upstream"]
["chr4","LNC_003404","XLOC_034016","lncRNA",241060127,241060980,"-","Zm00001d053790_T001","Zm00001d053790","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//1.30824e-20",241109057,241111959,"-",48076,"downstream"]
["chr4","LNC_003403","XLOC_034009","lncRNA",240944077,240945114,"-","Zm00001d053776_T009","Zm00001d053776","sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=3 SV=1//8.07789e-13",240858680,240875220,"-",68856,"upstream"]
["chr4","LNC_003401","XLOC_033973","lncRNA",239598713,239599078,"-","Zm00001d053704_T001","Zm00001d053704","sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1//1.07636e-18",239601161,239602231,"-",2082,"downstream"]
["chr4","LNC_003400","XLOC_033961","lncRNA",238541492,238541810,"-","Zm00001d053672_T004","Zm00001d053672",null,238614444,238621452,"-",72633,"downstream"]
["chr4","LNC_003408","XLOC_034042","lncRNA",241811528,241811818,"-","Zm00001d053819_T008","Zm00001d053819","sp|Q6H6V4|ARFF_ORYSJ Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6 PE=1 SV=1//0",241710274,241716042,"-",95485,"upstream"]
["chr6","LNC_004576","XLOC_046061","lncRNA",170558327,170558754,"-","Zm00001d039127_T001","Zm00001d039127","sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1//5.19494e-29",170606812,170619926,"+",48057,"upstream"]
["chr6","LNC_004574","XLOC_046007","lncRNA",168664661,168664995,"-","Zm00001d039006_T005","Zm00001d039006","sp|Q8S985|ARFO_ORYSJ Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1//0",168658843,168663784,"+",876,"downstream"]
["chr6","LNC_004574","XLOC_046007","lncRNA",168664661,168664995,"-","Zm00001d039007_T004","Zm00001d039007","sp|Q8GYH7|NSE2_ARATH E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana GN=MMS21 PE=1 SV=1//7.73328e-09",168671567,168674425,"-",6571,"downstream"]
["chr6","LNC_004574","XLOC_046007","lncRNA",168664661,168664995,"-","Zm00001d039002_T072","Zm00001d039002","sp|P24342|HXD11_CHICK Homeobox protein Hox-D11 OS=Gallus gallus GN=HOXD11 PE=2 SV=2//1.03754e-06",168610207,168621111,"-",43549,"upstream"]
["chr6","LNC_004573","XLOC_045983","lncRNA",167953476,167953873,"-","Zm00001d038970_T003","Zm00001d038970",null,167991334,167998651,"+",37460,"upstream"]
["chr6","LNC_004573","XLOC_045983","lncRNA",167953476,167953873,"-","Zm00001d038970_T001","Zm00001d038970",null,167991224,167998651,"+",37350,"upstream"]
["chr7","LNC_004579","XLOC_046143","lncRNA",635295,635957,"+","Zm00001d018602_T001","Zm00001d018602","sp|Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1//1.68626e-14",550230,556481,"-",78813,"upstream"]
["chr1","LNC_000509","XLOC_005645","lncRNA",54522428,54522638,"-","Zm00001d029004_T095","Zm00001d029004","sp|Q8SAB7|SPK1_ARATH Guanine nucleotide exchange factor SPIKE 1 OS=Arabidopsis thaliana GN=SPK1 PE=1 SV=1//0",54453452,54480625,"+",41802,"downstream"]
["chr1","LNC_000504","XLOC_005612","lncRNA",53075022,53075246,"-","Zm00001d028965_T001","Zm00001d028965",null,53169397,53175430,"-",94150,"downstream"]
["chr1","LNC_000501","XLOC_005580","lncRNA",50057010,50057590,"-","Zm00001d028896_T028","Zm00001d028896","sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio GN=efr3b PE=3 SV=2//6.85545e-13",50024979,50033275,"-",23734,"upstream"]
["chr1","LNC_000500","XLOC_005579","lncRNA",50052285,50052560,"-","Zm00001d028894_T001","Zm00001d028894","sp|Q9LSP7|UBC32_ARATH Ubiquitin-conjugating enzyme E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1//3.98746e-29",49987804,49990811,"+",61473,"downstream"]
["chr7","LNC_004992","XLOC_049934","lncRNA",123693959,123694458,"-","Zm00001d020584_T001","Zm00001d020584","sp|P0CG89|H4_SOYBN Histone H4 OS=Glycine max PE=3 SV=1//3.58019e-51",123703834,123704145,"+",9375,"upstream"]
["chr7","LNC_004994","XLOC_049939","lncRNA",124090777,124092767,"-","Zm00001d020593_T024","Zm00001d020593","sp|Q6NQ79|ARID4_ARATH AT-rich interactive domain-containing protein 4 OS=Arabidopsis thaliana GN=ARID4 PE=2 SV=1//1.90893e-20",123985121,123992639,"-",98137,"upstream"]
["chr7","LNC_004999","XLOC_050000","lncRNA",130095098,130095791,"-","Zm00001d001220_T001","Zm00001d001220",null,130044792,130045003,"+",50094,"downstream"]
["chr5","LNC_003975","XLOC_040396","lncRNA",199095631,199095875,"-","Zm00001d017544_T004","Zm00001d017544","sp|Q4KM92|TRUA_RAT tRNA pseudouridine synthase A, mitochondrial OS=Rattus norvegicus GN=Pus1 PE=3 SV=2//1.23288e-28",199139746,199141994,"+",43870,"upstream"]
["chr5","LNC_003979","XLOC_040453","lncRNA",203311064,203313607,"-","Zm00001d017660_T067","Zm00001d017660","sp|Q7X9V2|PIE1_ARATH Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana GN=PIE1 PE=1 SV=1//5.28692e-57",203323858,203348078,"-",10250,"downstream"]
["chr5","LNC_003979","XLOC_040453","lncRNA",203311064,203313607,"-","Zm00001d017660_T053","Zm00001d017660","sp|Q7X9V2|PIE1_ARATH Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana GN=PIE1 PE=1 SV=1//5.28692e-57",203318400,203346004,"-",4792,"downstream"]
["chr7","LNC_005038","XLOC_050494","lncRNA",156163650,156163910,"-","Zm00001d021566_T002","Zm00001d021566","sp|Q9ZQR3|Y2451_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=Arabidopsis thaliana GN=At2g14510 PE=2 SV=1//9.29803e-12",156211865,156221601,"-",47954,"downstream"]
["chr3","LNC_002626","XLOC_025881","lncRNA",141511227,141512067,"-","Zm00001d041864_T008","Zm00001d041864","sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=2 SV=1//3.10472e-07",141457424,141462522,"-",48704,"upstream"]
["chr3","LNC_002628","XLOC_025922","lncRNA",144099836,144100070,"-","Zm00001d041932_T007","Zm00001d041932","sp|O75691|UTP20_HUMAN Small subunit processome component 20 homolog OS=Homo sapiens GN=UTP20 PE=1 SV=3//2.88062e-43",144149621,144157858,"-",49550,"downstream"]
["chr7","LNC_005030","XLOC_050392","lncRNA",151686336,151686550,"-","Zm00001d021421_T023","Zm00001d021421","sp|Q43772|UGPA_HORVU UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1//1.01162e-20",151711197,151712187,"-",24646,"downstream"]
["chr1","LNC_000513","XLOC_005659","lncRNA",55272703,55274322,"-","Zm00001d029027_T001","Zm00001d029027","sp|P51204|YCF54_PORPU Uncharacterized protein ycf54 OS=Porphyra purpurea GN=ycf54 PE=3 SV=1//7.44529e-11",55241838,55244510,"+",28192,"downstream"]
["chr6","LNC_004373","XLOC_043898","lncRNA",29334043,29334357,"-","Zm00001d035492_T008","Zm00001d035492","sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1//1.31625e-55",29354391,29358392,"-",20033,"downstream"]
["chr2","LNC_002063","XLOC_020453","lncRNA",220419571,220419844,"-","Zm00001d007026_T001","Zm00001d007026","sp|Q5VP70|PIN3A_ORYSJ Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1//1.20974e-08",220375885,220377718,"+",41852,"downstream"]
["chr2","LNC_001829","XLOC_018242","lncRNA",52814350,52814556,"-","Zm00001d003659_T002","Zm00001d003659","sp|Q7XQP4|SAPK7_ORYSJ Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2//1.41875e-28",52839416,52844416,"-",24859,"downstream"]
["chr2","LNC_001823","XLOC_018213","lncRNA",50467229,50469465,"-","Zm00001d003616_T008","Zm00001d003616","sp|Q0JD07|C3H28_ORYSJ Zinc finger CCCH domain-containing protein 28 OS=Oryza sativa subsp. japonica GN=Os04g0438700 PE=2 SV=1//1.19511e-91",50474747,50475857,"-",5281,"downstream"]
["chr2","LNC_001824","XLOC_018215","lncRNA",50616528,50619125,"-","Zm00001d003621_T015","Zm00001d003621","sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1 OS=Arabidopsis thaliana GN=ELP1 PE=1 SV=1//0",50701779,50706825,"+",82653,"upstream"]
["chr7","LNC_004747","XLOC_047455","lncRNA",118660185,118660530,"+","Zm00001d020487_T001","Zm00001d020487","sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1//5.44059e-10",118586787,118588445,"+",71739,"downstream"]
["chr8","LNC_005568","XLOC_055609","lncRNA",128633494,128633790,"-","Zm00001d010811_T009","Zm00001d010811","sp|Q38997|KIN10_ARATH SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2//2.70066e-12",128605523,128618855,"-",14638,"upstream"]
["chr8","LNC_005563","XLOC_055524","lncRNA",124200770,124201039,"-","Zm00001d010684_T011","Zm00001d010684","sp|Q6L4V0|MSH5_ORYSJ DNA mismatch repair protein MSH5 OS=Oryza sativa subsp. japonica GN=MSH5 PE=2 SV=1//1.38534e-18",124260936,124270250,"+",59896,"upstream"]
["chr8","LNC_005566","XLOC_055591","lncRNA",127827412,127827833,"-","Zm00001d010791_T003","Zm00001d010791","sp|Q9LU15|AHP4_ARATH Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2//1.78933e-41",127880218,127887153,"-",52384,"downstream"]
["chr8","LNC_005566","XLOC_055591","lncRNA",127827412,127827833,"-","Zm00001d010790_T052","Zm00001d010790","sp|Q8W1Y3|KP1_ARATH Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2//2.17817e-142",127852097,127860673,"-",24263,"downstream"]
["chr2","LNC_002022","XLOC_019836","lncRNA",194794191,194794440,"-","Zm00001d005991_T002","Zm00001d005991","sp|Q8GYN9|MENB_ARATH 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis thaliana GN=MENB PE=1 SV=2//4.79544e-28",194881658,194887139,"+",87217,"upstream"]
["chr2","LNC_002023","XLOC_019838","lncRNA",194904284,194904502,"-","Zm00001d005990_T001","Zm00001d005990",null,194859678,194862485,"+",41798,"downstream"]
["chr2","LNC_002024","XLOC_019841","lncRNA",195045838,195046292,"-","Zm00001d006001_T003","Zm00001d006001","sp|Q9FG77|WRKY2_ARATH Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1//1.18716e-14",195047188,195051225,"-",895,"downstream"]
["chr2","LNC_002028","XLOC_019914","lncRNA",198698611,198698947,"-","Zm00001d006113_T009","Zm00001d006113","sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2//8.28394e-11",198798897,198822152,"+",99949,"upstream"]
["chr4","LNC_003213","XLOC_031941","lncRNA",86359818,86366389,"-","Zm00001d050404_T002","Zm00001d050404","sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=2 SV=2//3.70206e-35",86263971,86265651,"+",94166,"downstream"]
["chr10","LNC_000882","XLOC_009158","lncRNA",775902,776176,"+","Zm00001d023218_T146","Zm00001d023218","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//0",691264,699407,"+",76494,"downstream"]
["chr10","LNC_000882","XLOC_009158","lncRNA",775902,776176,"+","Zm00001d023222_T025","Zm00001d023222","sp|P31251|UBE12_WHEAT Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1//5.06145e-24",707966,712414,"-",63487,"upstream"]
["chr10","LNC_000882","XLOC_009158","lncRNA",775902,776176,"+","Zm00001d023218_T105","Zm00001d023218","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//0",689433,699325,"+",76576,"downstream"]
["chr10","LNC_000882","XLOC_009158","lncRNA",775902,776176,"+","Zm00001d023225_T001","Zm00001d023225","sp|O80919|TBL34_ARATH Protein trichome birefringence-like 34 OS=Arabidopsis thaliana GN=TBL34 PE=2 SV=2//3.37323e-129",826372,828398,"-",50195,"downstream"]
["chr10","LNC_000883","XLOC_009159","lncRNA",777436,777656,"+","Zm00001d023222_T014","Zm00001d023222","sp|P31251|UBE12_WHEAT Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1//5.06145e-24",706946,712863,"-",64572,"upstream"]
["chr10","LNC_000883","XLOC_009159","lncRNA",777436,777656,"+","Zm00001d023218_T168","Zm00001d023218","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//0",693373,699325,"+",78110,"downstream"]
["chr10","LNC_000883","XLOC_009159","lncRNA",777436,777656,"+","Zm00001d023218_T117","Zm00001d023218","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//0",690015,699325,"+",78110,"downstream"]
["chr10","LNC_000886","XLOC_009214","lncRNA",3649135,3649441,"+","Zm00001d023333_T006","Zm00001d023333","sp|F4K1J4|ATXR7_ARATH Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana GN=ATXR7 PE=2 SV=1//1.14466e-49",3606728,3620101,"-",29033,"upstream"]
["chr10","LNC_000886","XLOC_009214","lncRNA",3649135,3649441,"+","Zm00001d023333_T013","Zm00001d023333","sp|F4K1J4|ATXR7_ARATH Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana GN=ATXR7 PE=2 SV=1//1.14466e-49",3607129,3620926,"-",28208,"upstream"]
["chr10","LNC_000887","XLOC_009215","lncRNA",3650751,3651618,"+","Zm00001d023039_T001","Zm00001d023039",null,3743607,3743869,"-",91988,"downstream"]
["chr10","LNC_000884","XLOC_009185","lncRNA",2063935,2064277,"+","Zm00001d023282_T001","Zm00001d023282","sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1//2.24732e-75",2048298,2049531,"+",14403,"downstream"]
["chr10","LNC_000888","XLOC_009215","lncRNA",3650849,3651618,"+","Zm00001d023333_T017","Zm00001d023333","sp|F4K1J4|ATXR7_ARATH Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana GN=ATXR7 PE=2 SV=1//1.14466e-49",3607130,3615446,"-",35402,"upstream"]
["chr10","LNC_000889","XLOC_009219","lncRNA",3881491,3881853,"+","Zm00001d023351_T002","Zm00001d023351","sp|Q84PB3|IF4G1_ORYSJ Eukaryotic translation initiation factor isoform 4G-1 OS=Oryza sativa subsp. japonica GN=Os04g0499300 PE=2 SV=2//4.80409e-09",3949445,3952239,"-",67591,"downstream"]
["chr9","LNC_005904","XLOC_059004","lncRNA",154896665,154896937,"+","Zm00001d048343_T001","Zm00001d048343","sp|Q9SII8|DSK2B_ARATH Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana GN=DSK2B PE=1 SV=1//4.61421e-146",154791159,154796710,"-",99954,"upstream"]
["chr9","LNC_005906","XLOC_059012","lncRNA",155201765,155203509,"+","Zm00001d048379_T002","Zm00001d048379",null,155270769,155273709,"+",67259,"upstream"]
["chr9","LNC_005907","XLOC_059012","lncRNA",155201765,155204678,"+","Zm00001d048369_T001","Zm00001d048369","sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1//4.27329e-09",155203371,155205823,"-",-1308,"antisense"]
["chr9","LNC_005901","XLOC_058941","lncRNA",152719855,152720059,"+","Zm00001d048222_T001","Zm00001d048222","sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1//8.15889e-121",152679685,152682225,"+",37629,"downstream"]
["chr9","LNC_005903","XLOC_058978","lncRNA",154290834,154291404,"+","Zm00001d048310_T007","Zm00001d048310","sp|Q8L736|SKI11_ARATH F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana GN=SKIP11 PE=1 SV=2//2.30796e-139",154323618,154325671,"-",32213,"downstream"]
["chr9","LNC_005909","XLOC_059013","lncRNA",155205653,155207219,"+","Zm00001d048366_T001","Zm00001d048366",null,155189793,155191697,"+",13955,"downstream"]
["chr2","LNC_001593","XLOC_015320","lncRNA",132486716,132487159,"+","Zm00001d004707_T010","Zm00001d004707","sp|D8WUA4|SECA2_ARATH Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 PE=2 SV=1//0",132433069,132459952,"-",26763,"upstream"]
["chrB73V4_ctg107","LNC_006172","XLOC_061525","lncRNA",78511,78875,"+","Zm00001d000304_T013","Zm00001d000304",null,48408,49059,"-",29451,"upstream"]
["chrB73V4_ctg129","LNC_006175","XLOC_061560","lncRNA",66308,66584,"+","Zm00001d000213_T005","Zm00001d000213","sp|C5Z3W1|GUF1_SORBI Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor GN=Sb10g003070 PE=3 SV=1//5.98247e-52",120545,127693,"-",53960,"downstream"]
["chr10","LNC_001100","XLOC_011027","lncRNA",144013836,144014125,"+","Zm00001d026351_T009","Zm00001d026351","sp|Q0J9X2|ROC2_ORYSJ Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica GN=ROC2 PE=2 SV=1//6.22792e-110",144099214,144102901,"-",85088,"downstream"]
["chr10","LNC_001100","XLOC_011027","lncRNA",144013836,144014125,"+","Zm00001d026347_T008","Zm00001d026347","sp|Q94AM9|CID4_ARATH Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana GN=CID4 PE=2 SV=1//3.12457e-10",143968864,143973614,"+",40221,"downstream"]
["chr10","LNC_001102","XLOC_011046","lncRNA",144822090,144823270,"+","Zm00001d026388_T001","Zm00001d026388",null,144896623,144898409,"-",73352,"downstream"]
["chr10","LNC_001103","XLOC_011046","lncRNA",144822090,144823270,"+","Zm00001d026386_T009","Zm00001d026386","sp|Q5JNC0|COQ5_ORYSJ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1//1.35967e-15",144859607,144861446,"+",36336,"upstream"]
["chr10","LNC_001105","XLOC_011052","lncRNA",144895474,144896496,"+","Zm00001d026381_T001","Zm00001d026381","sp|Q5EA37|CC130_BOVIN Coiled-coil domain-containing protein 130 OS=Bos taurus GN=CCDC130 PE=2 SV=1//5.43031e-48",144810240,144816007,"+",79466,"downstream"]
["chr10","LNC_001106","XLOC_011055","lncRNA",144902374,144905193,"+","Zm00001d026387_T013","Zm00001d026387",null,144887832,144892402,"+",9971,"downstream"]
["chr10","LNC_001108","XLOC_011060","lncRNA",144924340,144924613,"+","Zm00001d026387_T003","Zm00001d026387",null,144881982,144891637,"+",32702,"downstream"]
["chr10","LNC_001108","XLOC_011060","lncRNA",144924340,144924613,"+","Zm00001d026390_T001","Zm00001d026390",null,144990951,144991196,"-",66337,"downstream"]
["chr10","LNC_001109","XLOC_011061","lncRNA",144927415,144927776,"+","Zm00001d026391_T002","Zm00001d026391","sp|P41227|NAA10_HUMAN N-alpha-acetyltransferase 10 OS=Homo sapiens GN=NAA10 PE=1 SV=1//1.134e-66",144991865,144994560,"-",64088,"downstream"]
["chr1","LNC_000312","XLOC_003250","lncRNA",230622640,230625573,"+","Zm00001d032567_T003","Zm00001d032567","sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16 OS=Arabidopsis thaliana GN=MED16 PE=1 SV=1//5.67379e-08",230714286,230732552,"-",88712,"downstream"]
["chr1","LNC_000313","XLOC_003250","lncRNA",230622640,230625573,"+","Zm00001d032567_T022","Zm00001d032567","sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16 OS=Arabidopsis thaliana GN=MED16 PE=1 SV=1//5.67379e-08",230722809,230731705,"-",97235,"downstream"]
["chr1","LNC_000311","XLOC_003250","lncRNA",230622597,230625573,"+","Zm00001d032562_T004","Zm00001d032562","sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis GN=tsr1 PE=2 SV=1//3.42906e-08",230562062,230562768,"-",59828,"upstream"]
["chr1","LNC_000316","XLOC_003315","lncRNA",235000608,235000815,"+","Zm00001d032699_T035","Zm00001d032699","sp|Q6P2B1|TNPO3_MOUSE Transportin-3 OS=Mus musculus GN=Tnpo3 PE=1 SV=1//5.07416e-18",235091572,235106928,"-",90756,"downstream"]
["chr1","LNC_000314","XLOC_003263","lncRNA",231536189,231536429,"+","Zm00001d032598_T012","Zm00001d032598","sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3//1.10886e-27",231626139,231633438,"+",89709,"upstream"]
["chr8","LNC_005350","XLOC_053934","lncRNA",178056938,178057360,"+","Zm00001d012659_T001","Zm00001d012659","sp|Q8CGF5|TMM56_MOUSE Transmembrane protein 56 OS=Mus musculus GN=Tmem56 PE=2 SV=1//1.47433e-22",178077109,178082439,"-",19748,"downstream"]
["chr8","LNC_005353","XLOC_053995","lncRNA",179868941,179869146,"+","Zm00001d012752_T003","Zm00001d012752","sp|F4HPR5|DRP5A_ARATH Dynamin-related protein 5A OS=Arabidopsis thaliana GN=DRP5A PE=2 SV=1//1.84016e-65",179798422,179801018,"+",67922,"downstream"]
["chr8","LNC_005353","XLOC_053995","lncRNA",179868941,179869146,"+","Zm00001d012751_T054","Zm00001d012751","sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1A PE=2 SV=1//8.31844e-17",179758795,179769370,"+",99570,"downstream"]
["chr8","LNC_005353","XLOC_053995","lncRNA",179868941,179869146,"+","Zm00001d012751_T048","Zm00001d012751","sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1A PE=2 SV=1//8.31844e-17",179758795,179769370,"+",99570,"downstream"]
["chr1","LNC_000279","XLOC_002847","lncRNA",206693296,206693738,"+","Zm00001d031913_T003","Zm00001d031913","sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1//5.81372e-180",206640493,206642534,"-",50761,"upstream"]
["chr8","LNC_005358","XLOC_054008","lncRNA",180330740,180331541,"+","Zm00001d012764_T002","Zm00001d012764","sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1//3.40778e-11",180332791,180335046,"-",1249,"downstream"]
["chr4","LNC_002810","XLOC_028003","lncRNA",29237605,29237811,"+","Zm00001d049399_T003","Zm00001d049399","sp|Q6Z1C0|NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp. japonica GN=Os08g0192900 PE=2 SV=1//3.22469e-51",29278593,29279529,"+",40781,"upstream"]
["chr4","LNC_002816","XLOC_028079","lncRNA",33281520,33283844,"+","Zm00001d049525_T004","Zm00001d049525","sp|Q0J7V9|LSD1_ORYSJ Protein LSD1 OS=Oryza sativa subsp. japonica GN=LSD1 PE=2 SV=1//7.89644e-15",33186410,33189186,"+",92333,"downstream"]
["chr4","LNC_002815","XLOC_028057","lncRNA",31622405,31622934,"+","Zm00001d049476_T137","Zm00001d049476","sp|P24449|ZEAC_MAIZE Zein-alpha PMS1 OS=Zea mays GN=ZMPMS1 PE=3 SV=1//7.71509e-48",31588167,31589012,"+",33392,"downstream"]
["chr4","LNC_002815","XLOC_028057","lncRNA",31622405,31622934,"+","Zm00001d049475_T001","Zm00001d049475","sp|Q7XQR9|MRE11_ORYSJ Double-strand break repair protein MRE11 OS=Oryza sativa subsp. japonica GN=MRE11 PE=1 SV=2//1.00222e-76",31540383,31541618,"+",80786,"downstream"]
["chr4","LNC_002815","XLOC_028057","lncRNA",31622405,31622934,"+","Zm00001d049476_T070","Zm00001d049476","sp|P24449|ZEAC_MAIZE Zein-alpha PMS1 OS=Zea mays GN=ZMPMS1 PE=3 SV=1//7.71509e-48",31588164,31589002,"+",33402,"downstream"]
["chr4","LNC_002819","XLOC_028102","lncRNA",34769499,34769742,"+","Zm00001d049553_T001","Zm00001d049553","sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11 PE=1 SV=1//8.30033e-45",34694524,34700206,"+",69292,"downstream"]
["chr9","LNC_005688","XLOC_057088","lncRNA",19236067,19236362,"+","Zm00001d045342_T005","Zm00001d045342","sp|O01592|CYSK3_CAEEL Cysteine synthase 3 OS=Caenorhabditis elegans GN=cysl-3 PE=1 SV=1//1.66341e-29",19224699,19227375,"+",8691,"downstream"]
["chr9","LNC_005687","XLOC_057080","lncRNA",19009740,19009974,"+","Zm00001d045329_T001","Zm00001d045329","sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana GN=ESD4 PE=1 SV=1//1.2651e-08",19083578,19085870,"-",73603,"downstream"]
["chr9","LNC_005685","XLOC_057036","lncRNA",17009881,17010316,"+","Zm00001d045251_T007","Zm00001d045251","sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1//0",17055267,17060003,"+",44950,"upstream"]
["chr6","LNC_004084","XLOC_041334","lncRNA",32802284,32802538,"+","Zm00001d035551_T008","Zm00001d035551","sp|Q8VYA5|RSZ33_ARATH Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana GN=RS2Z33 PE=1 SV=1//6.86295e-10",32902349,32905929,"-",99810,"downstream"]
["chr6","LNC_004085","XLOC_041335","lncRNA",32803050,32803269,"+","Zm00001d035551_T003","Zm00001d035551","sp|Q8VYA5|RSZ33_ARATH Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana GN=RS2Z33 PE=1 SV=1//6.86295e-10",32902156,32905827,"-",98886,"downstream"]
["chr9","LNC_006022","XLOC_060000","lncRNA",64524099,64524347,"-","Zm00001d046119_T006","Zm00001d046119","sp|Q9S7C0|HSP7O_ARATH Heat shock 70 kDa protein 14 OS=Arabidopsis thaliana GN=HSP70-14 PE=2 SV=1//8.64017e-73",64444022,64446968,"+",77130,"downstream"]
["chr6","LNC_004558","XLOC_045736","lncRNA",159070571,159098226,"-","Zm00001d038513_T002","Zm00001d038513",null,159016986,159021040,"+",49530,"downstream"]
["chr6","LNC_004559","XLOC_045752","lncRNA",159307426,159307824,"-","Zm00001d038531_T003","Zm00001d038531","sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana GN=P4H4 PE=2 SV=1//1.98051e-17",159372276,159375457,"+",64451,"upstream"]
["chr6","LNC_004552","XLOC_045678","lncRNA",156332741,156334497,"-","Zm00001d038397_T002","Zm00001d038397","sp|P25209|NFYB_MAIZE Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1//2.189e-102",156313355,156318855,"-",13885,"upstream"]
["chr6","LNC_004553","XLOC_045708","lncRNA",157746456,157746656,"-","Zm00001d038460_T004","Zm00001d038460","sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At3g08860 PE=2 SV=1//1.18213e-08",157677668,157678666,"-",67789,"upstream"]
["chr6","LNC_004554","XLOC_045713","lncRNA",158330031,158330301,"-","Zm00001d038475_T010","Zm00001d038475","sp|Q869L3|MDN1_DICDI Midasin OS=Dictyostelium discoideum GN=mdn1 PE=3 SV=2//6.5604e-08",158269706,158284245,"+",45785,"downstream"]
["chr6","LNC_004556","XLOC_045733","lncRNA",158915505,158915942,"-","Zm00001d038511_T001","Zm00001d038511","sp|Q5KQH7|C14D1_ORYSJ Cytochrome P450 714D1 OS=Oryza sativa subsp. japonica GN=CYP714D1 PE=1 SV=1//0",158957756,158969636,"+",41813,"upstream"]
["chr2","LNC_001690","XLOC_016415","lncRNA",210523718,210524031,"+","Zm00001d006533_T018","Zm00001d006533","sp|O65570|VILI4_ARATH Villin-4 OS=Arabidopsis thaliana GN=VLN4 PE=1 SV=1//0",210585377,210595754,"+",61345,"upstream"]
["chr2","LNC_001691","XLOC_016448","lncRNA",211725136,211725398,"+","Zm00001d006593_T021","Zm00001d006593","sp|F4K0A6|MYO2_ARATH Myosin-2 OS=Arabidopsis thaliana GN=VIII-2 PE=2 SV=1//0",211771096,211775813,"-",45697,"downstream"]
["chr2","LNC_001692","XLOC_016449","lncRNA",211736903,211737126,"+","Zm00001d006597_T046","Zm00001d006597","sp|Q0D5G4|Y7633_ORYSJ B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=3 SV=2//1.46252e-58",211815300,211818555,"+",78173,"upstream"]
["chr2","LNC_001692","XLOC_016449","lncRNA",211736903,211737126,"+","Zm00001d006597_T027","Zm00001d006597","sp|Q0D5G4|Y7633_ORYSJ B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=3 SV=2//1.46252e-58",211806203,211818445,"+",69076,"upstream"]
["chr2","LNC_001695","XLOC_016480","lncRNA",213368612,213368868,"+","Zm00001d006645_T010","Zm00001d006645","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//1.88375e-13",213336293,213343583,"+",25028,"downstream"]
["chr2","LNC_001696","XLOC_016521","lncRNA",215156459,215156710,"+","Zm00001d006717_T006","Zm00001d006717","sp|Q9SJT1|SAE2_ARATH SUMO-activating enzyme subunit 2 OS=Arabidopsis thaliana GN=SAE2 PE=1 SV=1//3.28371e-06",215049468,215062063,"+",94395,"downstream"]
["chr3","LNC_002258","XLOC_022285","lncRNA",115337010,115337391,"+","Zm00001d041387_T001","Zm00001d041387","sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2 SV=2//7.46513e-23",115337244,115338278,"-",-148,"antisense"]
["chr3","LNC_002251","XLOC_022254","lncRNA",112422566,112423302,"+","Zm00001d041327_T001","Zm00001d041327","sp|C0LGJ1|Y1743_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=2 SV=1//1.01238e-11",112397485,112399891,"+",22674,"downstream"]
["chr4","LNC_003029","XLOC_030079","lncRNA",199236611,199236845,"+","Zm00001d052734_T002","Zm00001d052734","sp|Q9LYP1|RBL3_ARATH RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1//3.9811e-18",199304832,199310418,"+",67986,"upstream"]
["chr4","LNC_003021","XLOC_029970","lncRNA",192793181,192793662,"+","Zm00001d052555_T001","Zm00001d052555","sp|O82221|RUXG_ARATH Probable small nuclear ribonucleoprotein G OS=Arabidopsis thaliana GN=At2g23930 PE=2 SV=1//1.30949e-20",192888200,192891568,"-",94537,"downstream"]
["chr4","LNC_003023","XLOC_030004","lncRNA",195060232,195060434,"+","Zm00001d052621_T013","Zm00001d052621",null,195066830,195068004,"+",6395,"upstream"]
["chr4","LNC_003022","XLOC_030003","lncRNA",195057577,195057992,"+","Zm00001d052624_T006","Zm00001d052624","sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus GN=RCC1 PE=1 SV=1//1.42385e-08",195157760,195163992,"-",99767,"downstream"]
["chr4","LNC_003025","XLOC_030016","lncRNA",195598703,195599192,"+","Zm00001d026970_T001","Zm00001d026970",null,195627747,195628338,"+",28554,"upstream"]
["chr4","LNC_003026","XLOC_030025","lncRNA",196199534,196200914,"+","Zm00001d052660_T005","Zm00001d052660","sp|B2V855|GATA_SULSY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA PE=3 SV=1//2.54701e-41",196207891,196212930,"+",6976,"upstream"]
["chr3","LNC_002649","XLOC_026146","lncRNA",157632713,157633095,"-","Zm00001d042259_T002","Zm00001d042259","sp|Q3B7M7|RMP_BOVIN Unconventional prefoldin RPB5 interactor OS=Bos taurus GN=URI1 PE=2 SV=1//2.75473e-15",157665994,157677675,"-",32898,"downstream"]
["chr3","LNC_002645","XLOC_026115","lncRNA",155818155,155818431,"-","Zm00001d042194_T001","Zm00001d042194",null,155807916,155809352,"+",8802,"downstream"]
["chr3","LNC_002643","XLOC_026112","lncRNA",155539648,155539919,"-","Zm00001d042188_T001","Zm00001d042188","sp|P0C5D6|SAPK3_ORYSJ Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. japonica GN=SAPK3 PE=1 SV=1//1.02555e-72",155482913,155484615,"+",55032,"downstream"]
["chr6","LNC_004316","XLOC_043560","lncRNA",2320502,2320718,"-","Zm00001d035029_T008","Zm00001d035029","sp|Q9JJ50|HGS_RAT Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus GN=Hgs PE=1 SV=1//9.54199e-09",2395670,2399927,"+",74951,"upstream"]
["chr6","LNC_004316","XLOC_043560","lncRNA",2320502,2320718,"-","Zm00001d035030_T008","Zm00001d035030","sp|Q7XZU3|SAC1_ARATH Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana GN=SAC1 PE=1 SV=1//1.40351e-81",2402536,2409604,"+",81817,"upstream"]
["chr6","LNC_004310","XLOC_043532","lncRNA",374109,379328,"-","Zm00001d034965_T001","Zm00001d034965","sp|Q6Z1Z3|IDEF1_ORYSJ B3 domain-containing protein IDEF1 OS=Oryza sativa subsp. japonica GN=IDEF1 PE=2 SV=1//7.03172e-97",290046,293456,"-",80652,"upstream"]
["chr6","LNC_004318","XLOC_043571","lncRNA",2947502,2947903,"-","Zm00001d035044_T035","Zm00001d035044","sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1 PE=1 SV=1//2.80002e-11",3024254,3028531,"+",76350,"upstream"]
["chr6","LNC_004319","XLOC_043572","lncRNA",2967390,2968132,"-","Zm00001d035041_T005","Zm00001d035041","sp|Q8W5R2|SHGR2_ARATH Phospholipase SGR2 OS=Arabidopsis thaliana GN=SGR2 PE=1 SV=1//0",2930365,2945422,"-",21967,"upstream"]
["chr9","LNC_005701","XLOC_057199","lncRNA",24847218,24847564,"+","Zm00001d045505_T004","Zm00001d045505","sp|Q658I5|LMBD1_ORYSJ LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica GN=Os06g0128200 PE=2 SV=1//4.33267e-55",24930151,24935418,"+",82586,"upstream"]
["chr2","LNC_001848","XLOC_018374","lncRNA",59479393,59479654,"-","Zm00001d003793_T003","Zm00001d003793",null,59492889,59495512,"+",13234,"upstream"]
["chr2","LNC_001842","XLOC_018350","lncRNA",58325810,58326115,"-","Zm00001d003773_T008","Zm00001d003773","sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2 SV=2//5.45577e-19",58372874,58377916,"-",46758,"downstream"]
["chr9","LNC_005705","XLOC_057231","lncRNA",26494981,26495306,"+","Zm00001d045551_T001","Zm00001d045551","sp|F4K1G2|AEE19_ARATH Putative acyl-activating enzyme 19 OS=Arabidopsis thaliana GN=At5g35930 PE=2 SV=1//1.24449e-22",26531799,26539648,"+",36492,"upstream"]
["chr7","LNC_004761","XLOC_047570","lncRNA",127534127,127535635,"+","Zm00001d020670_T001","Zm00001d020670","sp|Q67UE2|HOX11_ORYSJ Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1//2.42779e-78",127456340,127458007,"-",76119,"upstream"]
["chr1","LNC_000436","XLOC_004850","lncRNA",8089094,8114001,"-","Zm00001d022666_T001","Zm00001d022666","sp|A1E9R2|PSBM_SORBI Photosystem II reaction center protein M OS=Sorghum bicolor GN=psbM PE=3 SV=1//8.79381e-12",8204351,8207852,"+",90349,"upstream"]
["chr7","LNC_004769","XLOC_047626","lncRNA",130720275,130720656,"+","Zm00001d020737_T001","Zm00001d020737","sp|R4X247|TCEB4_TULGE Probable tuliposide A-converting enzyme b6, amyloplastic OS=Tulipa gesneriana GN=TCEA-B6 PE=2 SV=1//1.0852e-82",130745556,130746503,"+",24899,"upstream"]
["chr1","LNC_000432","XLOC_004746","lncRNA",3441201,3441939,"-","Zm00001d027351_T001","Zm00001d027351","sp|Q9XSC3|WDR44_BOVIN WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1//3.87344e-46",3482848,3487232,"+",40908,"upstream"]
["chr1","LNC_000431","XLOC_004739","lncRNA",3225671,3230191,"-","Zm00001d027334_T020","Zm00001d027334","sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE=1 SV=3//2.97265e-12",3127908,3135715,"+",89955,"downstream"]
["chr1","LNC_000430","XLOC_004717","lncRNA",2064701,2064960,"-","Zm00001d027299_T030","Zm00001d027299","sp|H3K2Y6|MED12_ARATH Mediator of RNA polymerase II transcription subunit 12 OS=Arabidopsis thaliana GN=MED12 PE=1 SV=1//1.87178e-16",2157405,2170297,"-",92444,"downstream"]
["chrB73V4_ctg31","LNC_006236","XLOC_061915","lncRNA",389644,389944,"-","Zm00001d000080_T006","Zm00001d000080","sp|Q5JLD8|CIPK8_ORYSJ CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1//3.49065e-07",423868,426660,"-",33923,"downstream"]
["chr8","LNC_005545","XLOC_055420","lncRNA",119166872,119167552,"-","Zm00001d010523_T003","Zm00001d010523","sp|Q9FQ11|SPP1_MAIZE Sucrose-phosphatase 1 OS=Zea mays GN=SPP1 PE=1 SV=1//1.14416e-18",119143185,119149180,"-",17691,"upstream"]
["chr8","LNC_005546","XLOC_055421","lncRNA",119168141,119169808,"-","Zm00001d010523_T009","Zm00001d010523","sp|Q9FQ11|SPP1_MAIZE Sucrose-phosphatase 1 OS=Zea mays GN=SPP1 PE=1 SV=1//1.14416e-18",119143203,119149349,"-",18791,"upstream"]
["chr2","LNC_002006","XLOC_019682","lncRNA",186179000,186179507,"-","Zm00001d005753_T001","Zm00001d005753","sp|P51414|RL261_ARATH 60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2 SV=2//3.15652e-56",186228847,186229224,"-",49339,"downstream"]
["chr2","LNC_002000","XLOC_019621","lncRNA",181518403,181519067,"-","Zm00001d005636_T004","Zm00001d005636","sp|O23144|PPI1_ARATH Proton pump-interactor 1 OS=Arabidopsis thaliana GN=PPI1 PE=1 SV=2//5.61603e-95",181459961,181465534,"+",52868,"downstream"]
["chr9","LNC_005968","XLOC_059655","lncRNA",28461105,28461481,"-","Zm00001d045603_T020","Zm00001d045603","sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 PE=1 SV=1//3.47943e-107",28436216,28457230,"+",3874,"downstream"]
["chr9","LNC_005968","XLOC_059655","lncRNA",28461105,28461481,"-","Zm00001d045603_T036","Zm00001d045603","sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 PE=1 SV=1//3.47943e-107",28436268,28457254,"+",3850,"downstream"]
["chr9","LNC_005966","XLOC_059636","lncRNA",26701268,26701559,"-","Zm00001d045555_T002","Zm00001d045555","sp|Q0JDK9|DAD1_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Oryza sativa subsp. japonica GN=DAD1 PE=3 SV=1//1.56154e-72",26647373,26649552,"-",51715,"upstream"]
["chr9","LNC_005965","XLOC_059631","lncRNA",26599130,26599332,"-","Zm00001d045551_T024","Zm00001d045551","sp|F4K1G2|AEE19_ARATH Putative acyl-activating enzyme 19 OS=Arabidopsis thaliana GN=At5g35930 PE=2 SV=1//1.24449e-22",26531820,26539711,"+",59418,"downstream"]
["chr9","LNC_005965","XLOC_059631","lncRNA",26599130,26599332,"-","Zm00001d045551_T005","Zm00001d045551","sp|F4K1G2|AEE19_ARATH Putative acyl-activating enzyme 19 OS=Arabidopsis thaliana GN=At5g35930 PE=2 SV=1//1.24449e-22",26531799,26540135,"+",58994,"downstream"]
["chr9","LNC_005963","XLOC_059596","lncRNA",24316805,24361617,"-","Zm00001d045488_T006","Zm00001d045488","sp|Q9SZ63|NUD14_ARATH Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana GN=NUDT14 PE=1 SV=2//4.94673e-22",24297427,24304428,"+",12376,"downstream"]
["chr10","LNC_001069","XLOC_010679","lncRNA",126780576,126785677,"+","Zm00001d025704_T001","Zm00001d025704","sp|Q9SV07|ASAT1_ARATH Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1//2.75574e-48",126794136,126795161,"-",8458,"downstream"]
["chr10","LNC_001068","XLOC_010679","lncRNA",126780574,126785677,"+","Zm00001d025705_T012","Zm00001d025705","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//6.82411e-33",126856884,126878775,"-",71206,"downstream"]
["chr10","LNC_001067","XLOC_010679","lncRNA",126780565,126785677,"+","Zm00001d025706_T011","Zm00001d025706","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//7.71005e-07",126880828,126888765,"-",95150,"downstream"]
["chr10","LNC_001065","XLOC_010679","lncRNA",126780565,126785677,"+","Zm00001d025706_T012","Zm00001d025706","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//7.71005e-07",126885073,126888800,"-",99395,"downstream"]
["chr10","LNC_001065","XLOC_010679","lncRNA",126780565,126785677,"+","Zm00001d025705_T015","Zm00001d025705","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//6.82411e-33",126856885,126878718,"-",71207,"downstream"]
["chr10","LNC_001063","XLOC_010679","lncRNA",126780565,126785677,"+","Zm00001d025705_T014","Zm00001d025705","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//6.82411e-33",126856884,126878792,"-",71206,"downstream"]
["chr10","LNC_001062","XLOC_010679","lncRNA",126780563,126785677,"+","Zm00001d025705_T007","Zm00001d025705","sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1//6.82411e-33",126856805,126878792,"-",71127,"downstream"]
["chr10","LNC_001060","XLOC_010679","lncRNA",126780563,126785677,"+","Zm00001d025699_T001","Zm00001d025699","sp|Q6CBI8|CIAO1_YARLI Probable cytosolic iron-sulfur protein assembly protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CIA1 PE=3 SV=1//3.87434e-10",126708804,126710162,"-",70400,"upstream"]
["chr5","LNC_003832","XLOC_039066","lncRNA",84495121,84496119,"-","Zm00001d015322_T001","Zm00001d015322",null,84500770,84501626,"+",4650,"upstream"]
["chr5","LNC_003838","XLOC_039132","lncRNA",90020551,90021198,"-","Zm00001d015435_T011","Zm00001d015435","sp|Q6R2K3|SRF3_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=2 SV=1//2.9364e-71",90053509,90074587,"-",32310,"downstream"]
["chr1","LNC_000334","XLOC_003479","lncRNA",244719505,244719943,"+","Zm00001d032957_T001","Zm00001d032957","sp|Q9SJ22|CESA9_ARATH Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1//5.33291e-84",244726721,244727637,"-",6777,"downstream"]
["chr1","LNC_000330","XLOC_003453","lncRNA",243033985,243039925,"+","Zm00001d032921_T001","Zm00001d032921","sp|C6TBN2|AKR1_SOYBN Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1//3.11979e-22",243105233,243132987,"+",65307,"upstream"]
["chr1","LNC_000333","XLOC_003478","lncRNA",244717371,244717695,"+","Zm00001d032956_T008","Zm00001d032956","sp|Q8R146|APEH_MOUSE Acylamino-acid-releasing enzyme OS=Mus musculus GN=Apeh PE=2 SV=3//7.4024e-15",244604927,244626982,"-",90388,"upstream"]
["chr4","LNC_002782","XLOC_027699","lncRNA",6558805,6559210,"+","Zm00001d048858_T001","Zm00001d048858",null,6485951,6486023,"-",72781,"upstream"]
["chr4","LNC_002781","XLOC_027684","lncRNA",6088684,6089248,"+","Zm00001d048825_T001","Zm00001d048825","sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imp1 PE=3 SV=1//1.80563e-27",6033089,6035517,"+",53166,"downstream"]
["chr4","LNC_002780","XLOC_027676","lncRNA",5932164,5932732,"+","Zm00001d048808_T001","Zm00001d048808","sp|P04699|ZEAY_MAIZE Zein-alpha ZA1/M1 OS=Zea mays PE=3 SV=1//2.1351e-24",5850648,5851046,"+",81117,"downstream"]
["chr4","LNC_002787","XLOC_027743","lncRNA",10446524,10449012,"+","Zm00001d048944_T007","Zm00001d048944","sp|P25519|HFLX_ECOLI GTPase HflX OS=Escherichia coli (strain K12) GN=hflX PE=1 SV=3//1.74132e-16",10376247,10385240,"-",61283,"upstream"]
["chr4","LNC_002784","XLOC_027708","lncRNA",6799291,6799558,"+","Zm00001d048876_T044","Zm00001d048876","sp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2//3.38712e-36",6865623,6879836,"+",66064,"upstream"]
["chr4","LNC_002784","XLOC_027708","lncRNA",6799291,6799558,"+","Zm00001d048876_T071","Zm00001d048876","sp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2//3.38712e-36",6868575,6879808,"+",69016,"upstream"]
["chr5","LNC_003785","XLOC_038480","lncRNA",41046650,41048162,"-","Zm00001d014324_T006","Zm00001d014324","sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana GN=At1g02270 PE=2 SV=2//1.03031e-133",41031269,41034836,"+",11813,"downstream"]
["chr5","LNC_003785","XLOC_038480","lncRNA",41046650,41048162,"-","Zm00001d014327_T001","Zm00001d014327","sp|Q9LVA7|ICLN_ARATH Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g62290 PE=2 SV=1//8.11979e-15",41088658,41100169,"+",40495,"upstream"]
["chr5","LNC_003786","XLOC_038480","lncRNA",41046650,41048173,"-","Zm00001d014327_T005","Zm00001d014327","sp|Q9LVA7|ICLN_ARATH Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g62290 PE=2 SV=1//8.11979e-15",41089377,41100131,"+",41203,"upstream"]
["chr5","LNC_003786","XLOC_038480","lncRNA",41046650,41048173,"-","Zm00001d014330_T062","Zm00001d014330","sp|Q9C5J9|Y5483_ARATH Uncharacterized GTP-binding protein At5g64813 OS=Arabidopsis thaliana GN=At5g64813 PE=1 SV=1//3.07364e-99",41118191,41123888,"-",70017,"downstream"]
["chr5","LNC_003782","XLOC_038470","lncRNA",40642419,40644686,"-","Zm00001d014317_T001","Zm00001d014317",null,40685899,40686909,"-",41212,"downstream"]
["chr8","LNC_005370","XLOC_054150","lncRNA",8091875,8092239,"-","Zm00001d008415_T001","Zm00001d008415",null,8138371,8138877,"-",46131,"downstream"]
["chr8","LNC_005375","XLOC_054160","lncRNA",8426668,8427604,"-","Zm00001d008429_T033","Zm00001d008429","sp|O48686|SNL3_ARATH Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana GN=SNL3 PE=1 SV=3//1.7318e-61",8455201,8475305,"-",27596,"downstream"]
["chr8","LNC_005374","XLOC_054160","lncRNA",8426668,8427543,"-","Zm00001d008425_T002","Zm00001d008425","sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2//4.53117e-102",8351568,8355320,"-",71347,"upstream"]
["chr4","LNC_002872","XLOC_028605","lncRNA",79139035,79139260,"+","Zm00001d050293_T020","Zm00001d050293","sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=2 SV=1//0",79158786,79161861,"+",19525,"upstream"]
["chr9","LNC_006002","XLOC_059900","lncRNA",52207859,52216889,"-","Zm00001d045984_T001","Zm00001d045984",null,52223379,52224524,"-",6489,"downstream"]
["chr10","LNC_000922","XLOC_009427","lncRNA",17729155,17729358,"+","Zm00001d023070_T001","Zm00001d023070",null,17677826,17678141,"-",51013,"upstream"]
["chr3","LNC_002272","XLOC_022503","lncRNA",136674558,136674899,"+","Zm00001d041767_T005","Zm00001d041767","sp|Q2R837|ALFL8_ORYSJ PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica GN=Os11g0244800 PE=2 SV=1//1.14189e-10",136598776,136603855,"-",70702,"upstream"]
["chr3","LNC_002277","XLOC_022551","lncRNA",139676586,139676846,"+","Zm00001d041833_T002","Zm00001d041833",null,139768041,139775685,"+",91194,"upstream"]
["chr3","LNC_002274","XLOC_022515","lncRNA",137954199,137954463,"+","Zm00001d041786_T003","Zm00001d041786",null,138047384,138065736,"-",92920,"downstream"]
["chr3","LNC_002279","XLOC_022567","lncRNA",141378837,141380757,"+","Zm00001d041864_T005","Zm00001d041864","sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=2 SV=1//3.10472e-07",141457409,141463572,"-",76651,"downstream"]
["chr4","LNC_003000","XLOC_029698","lncRNA",177534208,177539205,"+","Zm00001d052048_T001","Zm00001d052048",null,177562613,177563218,"+",23407,"upstream"]
["chr4","LNC_003005","XLOC_029748","lncRNA",180478269,180478554,"+","Zm00001d052128_T001","Zm00001d052128","sp|F4K5L5|TBL16_ARATH Protein trichome birefringence-like 16 OS=Arabidopsis thaliana GN=TBL16 PE=2 SV=1//6.31812e-105",180430486,180431925,"-",46343,"upstream"]
["chr3","LNC_002664","XLOC_026237","lncRNA",164526900,164527107,"-","Zm00001d042398_T010","Zm00001d042398","sp|Q5N7W3|RPN2_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Oryza sativa subsp. japonica GN=RPN2 PE=2 SV=1//3.84568e-102",164486974,164493005,"-",33894,"upstream"]
["chr3","LNC_002668","XLOC_026290","lncRNA",169731515,169731870,"-","Zm00001d042504_T004","Zm00001d042504","sp|Q6ZJD3|PLP2_ORYSJ Patatin-like protein 2 OS=Oryza sativa subsp. japonica GN=PLP2 PE=3 SV=1//6.64306e-22",169713553,169717532,"-",13982,"upstream"]
["chr7","LNC_004848","XLOC_048586","lncRNA",178389503,178390296,"+","Zm00001d022481_T048","Zm00001d022481",null,178469577,178481399,"-",79280,"downstream"]
["chr7","LNC_004848","XLOC_048586","lncRNA",178389503,178390296,"+","Zm00001d022481_T030","Zm00001d022481",null,178467792,178481388,"-",77495,"downstream"]
["chr7","LNC_004848","XLOC_048586","lncRNA",178389503,178390296,"+","Zm00001d022481_T005","Zm00001d022481",null,178467571,178481442,"-",77274,"downstream"]
["chr7","LNC_004842","XLOC_048478","lncRNA",174140846,174141161,"+","Zm00001d022273_T015","Zm00001d022273",null,174094549,174099842,"-",41003,"upstream"]
["chr6","LNC_004331","XLOC_043695","lncRNA",15546946,15547183,"-","Zm00001d035229_T001","Zm00001d035229","sp|Q0IGK1|MBD4L_ARATH Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana GN=MBD4L PE=1 SV=1//1.03444e-38",15530210,15536423,"-",10522,"upstream"]
["chr7","LNC_004844","XLOC_048546","lncRNA",176688583,176689737,"+","Zm00001d022388_T016","Zm00001d022388","sp|P23225|GLTB_MAIZE Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1//2.22116e-08",176589282,176606662,"-",81920,"upstream"]
["chr2","LNC_001867","XLOC_018464","lncRNA",66835285,66835549,"-","Zm00001d003911_T009","Zm00001d003911","sp|Q7XVM8|TIR1B_ORYSJ Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1//1.06729e-79",66815892,66820559,"+",14725,"downstream"]
["chr2","LNC_001861","XLOC_018422","lncRNA",62516416,62516626,"-","Zm00001d003850_T001","Zm00001d003850",null,62448255,62449800,"+",66615,"downstream"]
["chr10","LNC_001319","XLOC_013074","lncRNA",138606881,138607199,"-","Zm00001d026111_T030","Zm00001d026111","sp|Q7XSA2|AGO1B_ORYSJ Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3//0",138699606,138708132,"+",92406,"upstream"]
["chr10","LNC_001319","XLOC_013074","lncRNA",138606881,138607199,"-","Zm00001d026111_T058","Zm00001d026111","sp|Q7XSA2|AGO1B_ORYSJ Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3//0",138701309,138708087,"+",94109,"upstream"]
["chr10","LNC_001319","XLOC_013074","lncRNA",138606881,138607199,"-","Zm00001d026103_T011","Zm00001d026103","sp|Q96RT7|GCP6_HUMAN Gamma-tubulin complex component 6 OS=Homo sapiens GN=TUBGCP6 PE=1 SV=3//2.76859e-12",138505955,138514359,"+",92521,"downstream"]
["chr5","LNC_003649","XLOC_036658","lncRNA",178410482,178411406,"+","Zm00001d016855_T006","Zm00001d016855","sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1//9.42522e-13",178397756,178406288,"+",4193,"downstream"]
["chr5","LNC_003649","XLOC_036658","lncRNA",178410482,178411406,"+","Zm00001d016856_T001","Zm00001d016856","sp|Q9FKL6|CB60B_ARATH Calmodulin-binding protein 60 B OS=Arabidopsis thaliana GN=CBP60B PE=2 SV=1//1.534e-32",178414694,178420875,"+",3287,"upstream"]
["chr5","LNC_003644","XLOC_036585","lncRNA",173450269,173450520,"+","Zm00001d016711_T002","Zm00001d016711","sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis thaliana GN=ULP1B PE=5 SV=2//2.75068e-06",173427728,173431243,"+",19025,"downstream"]
["chr5","LNC_003646","XLOC_036641","lncRNA",177350971,177351205,"+","Zm00001d016822_T019","Zm00001d016822","sp|Q9C5G5|SAC7_ARATH Phosphoinositide phosphatase SAC7 OS=Arabidopsis thaliana GN=SAC7 PE=2 SV=1//0",177261521,177285924,"+",65046,"downstream"]
["chr1","LNC_000133","XLOC_001670","lncRNA",97464444,97464650,"+","Zm00001d029982_T001","Zm00001d029982",null,97371800,97371872,"-",92571,"upstream"]
["chr8","LNC_005525","XLOC_055267","lncRNA",105843926,105844893,"-","Zm00001d010243_T002","Zm00001d010243","sp|Q93YU2|RUS6_ARATH Protein root UVB sensitive 6 OS=Arabidopsis thaliana GN=RUS6 PE=2 SV=1//0",105772525,105778881,"-",65044,"upstream"]
["chr8","LNC_005523","XLOC_055258","lncRNA",104958242,104958551,"-","Zm00001d010230_T002","Zm00001d010230","sp|Q9LNK7|NIPA3_ARATH Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1//4.07894e-19",104878461,104883524,"+",74717,"downstream"]
["chr9","LNC_005931","XLOC_059356","lncRNA",11855926,11866452,"-","Zm00001d045077_T001","Zm00001d045077","sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1//1.17267e-37",11788307,11789563,"-",66362,"upstream"]
["chr2","LNC_002068","XLOC_020544","lncRNA",225522556,225525721,"-","Zm00001d007245_T001","Zm00001d007245","sp|F4ITL6|RTE1_ARATH Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 SV=1//1.93879e-29",225571153,225574882,"-",45431,"downstream"]
["chr2","LNC_002066","XLOC_020526","lncRNA",224603202,224603415,"-","Zm00001d007204_T002","Zm00001d007204","sp|Q7T308|RN168_DANRE E3 ubiquitin-protein ligase RNF168 OS=Danio rerio GN=rnf168 PE=2 SV=1//5.51338e-09",224654476,224657554,"-",51060,"downstream"]
["chr2","LNC_002064","XLOC_020458","lncRNA",220618918,220619221,"-","Zm00001d007034_T014","Zm00001d007034","sp|Q8L706|SYT5_ARATH Synaptotagmin-5 OS=Arabidopsis thaliana GN=SYT5 PE=2 SV=1//5.96579e-42",220570350,220602402,"+",16515,"downstream"]
["chr2","LNC_002065","XLOC_020490","lncRNA",222456200,222456441,"-","Zm00001d007109_T001","Zm00001d007109",null,222466706,222469097,"-",10264,"downstream"]
["chr2","LNC_002061","XLOC_020372","lncRNA",219973138,219974136,"-","Zm00001d006938_T003","Zm00001d006938","sp|P83103|HASP_DROME Putative serine/threonine-protein kinase haspin homolog OS=Drosophila melanogaster GN=Haspin PE=2 SV=1//4.26509e-48",219878812,219891203,"+",81934,"downstream"]
["chr2","LNC_002061","XLOC_020372","lncRNA",219973138,219974136,"-","Zm00001d006998_T001","Zm00001d006998",null,220063859,220063932,"-",89722,"downstream"]
["chr4","LNC_003254","XLOC_032193","lncRNA",117945519,117945821,"-","Zm00001d050714_T001","Zm00001d050714","sp|Q38834|R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=1 SV=2//6.32816e-08",117910694,117919249,"+",26269,"downstream"]
["chr9","LNC_005937","XLOC_059377","lncRNA",13467538,13468867,"-","Zm00001d045119_T001","Zm00001d045119",null,13420012,13421067,"-",46470,"upstream"]
["chr9","LNC_005944","XLOC_059453","lncRNA",17336854,17337649,"-","Zm00001d045260_T001","Zm00001d045260",null,17349267,17351105,"-",11617,"downstream"]
["chr9","LNC_005946","XLOC_059484","lncRNA",18857528,18857729,"-","Zm00001d045323_T006","Zm00001d045323","sp|Q9SYM2|BBX22_ARATH B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2//5.64691e-18",18935857,18946856,"-",78127,"downstream"]
["chrB73V4_ctg61","LNC_006253","XLOC_062027","lncRNA",57082,57461,"+","Zm00001d000344_T001","Zm00001d000344","sp|Q8H129|PPA3_ARATH Purple acid phosphatase 3 OS=Arabidopsis thaliana GN=PAP3 PE=2 SV=1//1.38888e-111",40115,44165,"-",12916,"upstream"]
["chr10","LNC_001083","XLOC_010802","lncRNA",133883774,133884034,"+","Zm00001d025927_T002","Zm00001d025927","sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis thaliana GN=ULP1B PE=5 SV=2//1.33492e-06",133909556,133913017,"-",25521,"downstream"]
["chr10","LNC_001084","XLOC_010835","lncRNA",135150097,135150800,"+","Zm00001d025980_T024","Zm00001d025980","sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=2 SV=1//1.18171e-59",135233650,135241496,"-",82849,"downstream"]
["chr10","LNC_001087","XLOC_010853","lncRNA",135887607,135888312,"+","Zm00001d026007_T001","Zm00001d026007",null,135862216,135862288,"-",25318,"upstream"]
["chr10","LNC_001086","XLOC_010849","lncRNA",135780267,135780836,"+","Zm00001d026000_T002","Zm00001d026000","sp|Q69ZC8|GPAM1_MOUSE GPALPP motifs-containing protein 1 OS=Mus musculus GN=Gpalpp1 PE=1 SV=2//6.48852e-09",135741680,135750293,"+",29973,"downstream"]
["chr8","LNC_005379","XLOC_054211","lncRNA",11923617,11923910,"-","Zm00001d008531_T006","Zm00001d008531","sp|A0JMW6|T214A_XENLA Transmembrane protein 214-A OS=Xenopus laevis GN=tmem214-a PE=2 SV=1//1.17591e-08",11932927,11937990,"-",9016,"downstream"]
["chr1","LNC_000684","XLOC_007172","lncRNA",193067566,193067997,"-","Zm00001d031529_T006","Zm00001d031529","sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2//1.05903e-21",192960961,192969064,"-",98501,"upstream"]
["chr1","LNC_000682","XLOC_007150","lncRNA",191858924,191859415,"-","Zm00001d031487_T010","Zm00001d031487","sp|Q6Z8M8|SPL15_ORYSJ Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1//0",191766773,191771432,"+",87491,"downstream"]
["chr1","LNC_000683","XLOC_007170","lncRNA",193064778,193065040,"-","Zm00001d031529_T004","Zm00001d031529","sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2//1.05903e-21",192960961,192969064,"-",95713,"upstream"]
["chr5","LNC_003812","XLOC_038730","lncRNA",61281843,61282244,"-","Zm00001d014745_T001","Zm00001d014745",null,61244181,61244891,"-",36951,"upstream"]
["chr5","LNC_003818","XLOC_038901","lncRNA",72520889,72521115,"-","Zm00001d015016_T001","Zm00001d015016",null,72495775,72496279,"-",24609,"upstream"]
["chr1","LNC_000357","XLOC_003752","lncRNA",260952225,260952657,"+","Zm00001d033375_T044","Zm00001d033375","sp|Q6IMT1|SAB_ARATH Protein SABRE OS=Arabidopsis thaliana GN=SAB PE=1 SV=1//0",260999970,261031665,"-",47312,"downstream"]
["chr1","LNC_000357","XLOC_003752","lncRNA",260952225,260952657,"+","Zm00001d033370_T007","Zm00001d033370","sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B&apos; beta isoform OS=Arabidopsis thaliana GN=B&apos;BETA PE=1 SV=1//0",260838704,260857138,"+",95086,"downstream"]
["chr1","LNC_000354","XLOC_003749","lncRNA",260932540,260939311,"+","Zm00001d033375_T003","Zm00001d033375","sp|Q6IMT1|SAB_ARATH Protein SABRE OS=Arabidopsis thaliana GN=SAB PE=1 SV=1//0",260986515,261031670,"-",47203,"downstream"]
["chr1","LNC_000355","XLOC_003749","lncRNA",260932587,260939311,"+","Zm00001d033371_T005","Zm00001d033371","sp|Q9ZR37|DUS1_ARATH Dual specificity protein phosphatase 1 OS=Arabidopsis thaliana GN=DSPTP1 PE=1 SV=1//8.27475e-29",260861781,260871169,"-",61417,"upstream"]
["chr1","LNC_000353","XLOC_003749","lncRNA",260932533,260939311,"+","Zm00001d033370_T003","Zm00001d033370","sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B&apos; beta isoform OS=Arabidopsis thaliana GN=B&apos;BETA PE=1 SV=1//0",260837517,260856860,"+",75672,"downstream"]
["chr1","LNC_000350","XLOC_003713","lncRNA",258825568,258826027,"+","Zm00001d033318_T001","Zm00001d033318","sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1//7.82287e-26",258854604,258874451,"+",28576,"upstream"]
["chr1","LNC_000358","XLOC_003753","lncRNA",260953708,260954541,"+","Zm00001d033371_T005","Zm00001d033371","sp|Q9ZR37|DUS1_ARATH Dual specificity protein phosphatase 1 OS=Arabidopsis thaliana GN=DSPTP1 PE=1 SV=1//8.27475e-29",260861781,260871169,"-",82538,"upstream"]
["chr1","LNC_000359","XLOC_003756","lncRNA",260957877,260958325,"+","Zm00001d033371_T007","Zm00001d033371","sp|Q9ZR37|DUS1_ARATH Dual specificity protein phosphatase 1 OS=Arabidopsis thaliana GN=DSPTP1 PE=1 SV=1//8.27475e-29",260861782,260871074,"-",86802,"upstream"]
["chr1","LNC_000359","XLOC_003756","lncRNA",260957877,260958325,"+","Zm00001d033375_T041","Zm00001d033375","sp|Q6IMT1|SAB_ARATH Protein SABRE OS=Arabidopsis thaliana GN=SAB PE=1 SV=1//0",260998907,261031665,"-",40581,"downstream"]
["chr8","LNC_005311","XLOC_053256","lncRNA",148828020,148828329,"+","Zm00001d011372_T001","Zm00001d011372",null,148838757,148838829,"-",10427,"downstream"]
["chr8","LNC_005310","XLOC_053255","lncRNA",148819362,148819570,"+","Zm00001d011373_T013","Zm00001d011373",null,148912068,148917624,"-",92497,"downstream"]
["chr4","LNC_002859","XLOC_028483","lncRNA",66723247,66723591,"+","Zm00001d050112_T030","Zm00001d050112",null,66635344,66651302,"+",71944,"downstream"]
["chr4","LNC_002859","XLOC_028483","lncRNA",66723247,66723591,"+","Zm00001d050112_T004","Zm00001d050112",null,66635305,66651074,"+",72172,"downstream"]
["chr4","LNC_002850","XLOC_028414","lncRNA",58853066,58853475,"+","Zm00001d049999_T002","Zm00001d049999",null,58832562,58834551,"+",18514,"downstream"]
["chr6","LNC_004042","XLOC_041042","lncRNA",5776663,5776943,"+","Zm00001d035113_T015","Zm00001d035113",null,5769469,5775665,"-",997,"upstream"]
["chr6","LNC_004043","XLOC_041043","lncRNA",5918668,5918869,"+","Zm00001d035115_T008","Zm00001d035115","sp|Q9SYD6|MATE1_ARATH MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE PE=2 SV=2//5.41438e-10",5904707,5907743,"-",10924,"upstream"]
["chr6","LNC_004045","XLOC_041059","lncRNA",6707541,6707821,"+","Zm00001d035140_T003","Zm00001d035140","sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B&apos; gamma isoform OS=Arabidopsis thaliana GN=B&apos;GAMMA PE=1 SV=2//0",6799752,6803397,"-",91930,"downstream"]
["chr10","LNC_000901","XLOC_009293","lncRNA",7198305,7198562,"+","Zm00001d023487_T001","Zm00001d023487",null,7166123,7167250,"-",31054,"upstream"]
["chr10","LNC_000904","XLOC_009311","lncRNA",8787648,8788063,"+","Zm00001d023530_T007","Zm00001d023530",null,8784909,8791142,"-",-416,"antisense"]
["chr10","LNC_000909","XLOC_009351","lncRNA",11482373,11482688,"+","Zm00001d023602_T001","Zm00001d023602",null,11517160,11517459,"-",34471,"downstream"]
["chr7","LNC_004590","XLOC_046243","lncRNA",4446932,4447463,"+","Zm00001d018763_T001","Zm00001d018763",null,4525634,4527812,"-",78170,"downstream"]
["chr7","LNC_004593","XLOC_046264","lncRNA",5775358,5775820,"+","Zm00001d018809_T001","Zm00001d018809","sp|Q03666|GSTX4_TOBAC Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1//5.05966e-82",5834880,5838491,"-",59059,"downstream"]
["chr9","LNC_005885","XLOC_058762","lncRNA",144832349,144832712,"+","Zm00001d047906_T006","Zm00001d047906","sp|P24521|ERG8_YEAST Phosphomevalonate kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG8 PE=1 SV=2//5.38773e-19",144877403,144885617,"+",44690,"upstream"]
["chr9","LNC_005884","XLOC_058745","lncRNA",144087870,144088089,"+","Zm00001d047882_T010","Zm00001d047882","sp|Q10NT7|HRD3_ORYSJ ERAD-associated E3 ubiquitin-protein ligase component HRD3 OS=Oryza sativa subsp. japonica GN=HRD3 PE=2 SV=1//1.22739e-15",144129862,144139943,"-",41772,"downstream"]
["chr9","LNC_005886","XLOC_058764","lncRNA",144850853,144856359,"+","Zm00001d027205_T001","Zm00001d027205",null,144859693,144860520,"+",3333,"upstream"]
["chr9","LNC_005880","XLOC_058688","lncRNA",142045843,142046422,"+","Zm00001d047799_T001","Zm00001d047799","sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1//0",142104072,142106836,"+",57649,"upstream"]
["chr9","LNC_005883","XLOC_058731","lncRNA",143674909,143675244,"+","Zm00001d047859_T001","Zm00001d047859","sp|Q6AXT8|SF3A2_RAT Splicing factor 3A subunit 2 OS=Rattus norvegicus GN=Sf3a2 PE=2 SV=1//4.81598e-69",143633531,143636108,"+",38800,"downstream"]
["chr9","LNC_005889","XLOC_058767","lncRNA",144848035,144850057,"+","Zm00001d047904_T001","Zm00001d047904","sp|Q9C801|MOS2_ARATH Protein MOS2 OS=Arabidopsis thaliana GN=MOS2 PE=2 SV=1//6.52862e-15",144840381,144842139,"+",5895,"downstream"]
["chr3","LNC_002211","XLOC_021976","lncRNA",76524561,76524900,"+","Zm00001d040893_T001","Zm00001d040893",null,76453764,76456175,"-",68385,"upstream"]
["chr4","LNC_003064","XLOC_030481","lncRNA",230804937,230805272,"+","Zm00001d053415_T001","Zm00001d053415",null,230807016,230807411,"+",1743,"upstream"]
["chr4","LNC_003060","XLOC_030384","lncRNA",222960442,222960779,"+","Zm00001d053262_T016","Zm00001d053262","sp|Q709C8|VP13C_HUMAN Vacuolar protein sorting-associated protein 13C OS=Homo sapiens GN=VPS13C PE=1 SV=1//2.78542e-27",223020138,223049604,"+",59358,"upstream"]
["chr4","LNC_003068","XLOC_030517","lncRNA",233221588,233223802,"+","Zm00001d053537_T001","Zm00001d053537","sp|Q4P0G6|CWC21_USTMA Pre-mRNA-splicing factor CWC21 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CWC21 PE=3 SV=1//2.35347e-13",233305616,233306029,"-",81813,"downstream"]
["chr7","LNC_005088","XLOC_051099","lncRNA",181066631,181072295,"-","Zm00001d022608_T001","Zm00001d022608","sp|Q651D5|PIP27_ORYSJ Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2//2.72704e-167",181006312,181007488,"-",59142,"upstream"]
["chr7","LNC_005087","XLOC_051099","lncRNA",181066631,181072295,"-","Zm00001d022615_T003","Zm00001d022615","sp|Q94CH6|EXL3_ARATH GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1//7.65672e-103",181113483,181117268,"+",41187,"upstream"]
["chr7","LNC_005080","XLOC_051036","lncRNA",178795805,178796016,"-","Zm00001d022493_T004","Zm00001d022493","sp|P19515|LIP_RHIMI Lipase OS=Rhizomucor miehei PE=1 SV=2//2.81646e-30",178734729,178738801,"-",57003,"upstream"]
["chr7","LNC_005083","XLOC_051099","lncRNA",181066631,181070557,"-","Zm00001d022609_T001","Zm00001d022609",null,181032585,181033806,"+",32824,"downstream"]
["chr2","LNC_001742","XLOC_017263","lncRNA",2636162,2636368,"-","Zm00001d001906_T004","Zm00001d001906","sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1 OS=Arabidopsis thaliana GN=EHD1 PE=1 SV=1//1.69551e-09",2644303,2648830,"-",7934,"downstream"]
["chr2","LNC_001742","XLOC_017263","lncRNA",2636162,2636368,"-","Zm00001d001906_T015","Zm00001d001906","sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1 OS=Arabidopsis thaliana GN=EHD1 PE=1 SV=1//1.69551e-09",2644619,2648746,"-",8250,"downstream"]
["chr2","LNC_001743","XLOC_017277","lncRNA",3023052,3024356,"-","Zm00001d001929_T006","Zm00001d001929","sp|Q84TH6|DIR23_ARATH Dirigent protein 23 OS=Arabidopsis thaliana GN=DIR23 PE=2 SV=1//5.62627e-18",3086351,3089138,"+",61994,"upstream"]
["chr2","LNC_001743","XLOC_017277","lncRNA",3023052,3024356,"-","Zm00001d001923_T018","Zm00001d001923",null,2993595,2998654,"+",24397,"downstream"]
["chr2","LNC_001741","XLOC_017218","lncRNA",1064167,1064708,"-","Zm00001d001799_T001","Zm00001d001799","sp|Q14691|PSF1_HUMAN DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1//6.31202e-31",1084435,1086981,"-",19726,"downstream"]
["chr2","LNC_001746","XLOC_017293","lncRNA",3620742,3621011,"-","Zm00001d001962_T011","Zm00001d001962","sp|P11369|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2//9.79811e-28",3572239,3587563,"+",33178,"downstream"]
["chr2","LNC_001747","XLOC_017316","lncRNA",4532200,4532542,"-","Zm00001d002022_T004","Zm00001d002022","sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2//4.76711e-06",4547362,4552469,"+",14819,"upstream"]
["chr2","LNC_001744","XLOC_017290","lncRNA",3480052,3480364,"-","Zm00001d001962_T007","Zm00001d001962","sp|P11369|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2//9.79811e-28",3572237,3587783,"+",91872,"upstream"]
["chr2","LNC_001745","XLOC_017291","lncRNA",3603637,3603946,"-","Zm00001d001967_T001","Zm00001d001967","sp|Q9LZD7|MED7B_ARATH Mediator of RNA polymerase II transcription subunit 7b OS=Arabidopsis thaliana GN=MED7B PE=1 SV=1//2.9965e-26",3611983,3617022,"+",8036,"upstream"]
["chr7","LNC_005028","XLOC_050345","lncRNA",148818171,148818464,"-","Zm00001d021318_T008","Zm00001d021318","sp|F4JNY0|APE2_ARATH DNA-(apurinic or apyrimidinic site) lyase 2 OS=Arabidopsis thaliana GN=APE2 PE=1 SV=1//1.37498e-157",148761662,148768837,"-",49333,"upstream"]
["chr7","LNC_004864","XLOC_048835","lncRNA",7447563,7447780,"-","Zm00001d018859_T010","Zm00001d018859","sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1//4.72277e-141",7531993,7554865,"-",84212,"downstream"]
["chr7","LNC_004865","XLOC_048857","lncRNA",8562541,8565311,"-","Zm00001d018896_T008","Zm00001d018896","sp|Q0VCZ3|YTHD2_BOVIN YTH domain-containing family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1//3.23019e-55",8603239,8607570,"-",37927,"downstream"]
["chr7","LNC_004866","XLOC_048865","lncRNA",9191954,9192730,"-","Zm00001d018912_T006","Zm00001d018912","sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1 OS=Arabidopsis thaliana GN=IDM1 PE=1 SV=1//3.09429e-95",9117260,9136240,"+",55713,"downstream"]
["chr7","LNC_005024","XLOC_050277","lncRNA",146473249,146473501,"-","Zm00001d021227_T001","Zm00001d021227","sp|F4JPR7|PUX8_ARATH Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana GN=PUX8 PE=1 SV=1//6.729e-89",146557648,146567138,"-",84146,"downstream"]
["chr7","LNC_005021","XLOC_050243","lncRNA",144268594,144268905,"-","Zm00001d021160_T001","Zm00001d021160",null,144296960,144297214,"-",28054,"downstream"]
["chr10","LNC_001338","XLOC_013208","lncRNA",143962535,143962902,"-","Zm00001d026346_T003","Zm00001d026346","sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1//6.76703e-07",143957345,143961837,"+",697,"downstream"]
["chr10","LNC_001333","XLOC_013182","lncRNA",143241690,143242062,"-","Zm00001d026307_T001","Zm00001d026307","sp|Q84JZ6|MORF3_ARATH Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana GN=MORF3 PE=1 SV=1//2.28634e-81",143304025,143307489,"-",61962,"downstream"]
["chr10","LNC_001333","XLOC_013182","lncRNA",143241690,143242062,"-","Zm00001d026303_T026","Zm00001d026303","sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=2 SV=2//1.11581e-06",143231434,143238877,"-",2812,"upstream"]
["chr10","LNC_001333","XLOC_013182","lncRNA",143241690,143242062,"-","Zm00001d026296_T003","Zm00001d026296",null,143156312,143161100,"+",80589,"downstream"]
["chr10","LNC_001332","XLOC_013172","lncRNA",142871460,142871745,"-","Zm00001d026289_T003","Zm00001d026289","sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3//4.04459e-40",142956463,142961794,"-",84717,"downstream"]
["chr10","LNC_001330","XLOC_013154","lncRNA",142264037,142265222,"-","Zm00001d026264_T001","Zm00001d026264",null,142356307,142356380,"+",91084,"upstream"]
["chr10","LNC_001330","XLOC_013154","lncRNA",142264037,142265222,"-","Zm00001d026263_T013","Zm00001d026263","sp|Q9FFK6|NUP88_ARATH Nuclear pore complex protein NUP88 OS=Arabidopsis thaliana GN=NUP88 PE=1 SV=1//2.74379e-74",142347980,142359053,"+",82757,"upstream"]
["chr10","LNC_001336","XLOC_013197","lncRNA",143604678,143605041,"-","Zm00001d026334_T021","Zm00001d026334","sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1//0",143652594,143657577,"-",47552,"downstream"]
["chr10","LNC_001336","XLOC_013197","lncRNA",143604678,143605041,"-","Zm00001d026331_T026","Zm00001d026331","sp|Q5F471|PP6R3_CHICK Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Gallus gallus GN=PPP6R3 PE=2 SV=1//2.29343e-46",143632358,143644252,"+",27316,"upstream"]
["chrB73V4_ctg10","LNC_006166","XLOC_061502","lncRNA",659912,660175,"-","Zm00001d000066_T001","Zm00001d000066","sp|Q0DK10|RL11_ORYSJ 60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11 PE=2 SV=1//3.09203e-71",655391,657780,"+",2131,"downstream"]
["chr5","LNC_003661","XLOC_036822","lncRNA",186524551,186530505,"+","Zm00001d017134_T001","Zm00001d017134","sp|Q9SXZ2|FT_ARATH Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2//3.43679e-86",186525660,186529038,"-",-3379,"antisense"]
["chr5","LNC_003669","XLOC_036875","lncRNA",190053199,190054082,"+","Zm00001d001704_T001","Zm00001d001704",null,190149331,190149722,"+",95248,"upstream"]
["chr8","LNC_005505","XLOC_055092","lncRNA",90199547,90200098,"-","Zm00001d009928_T001","Zm00001d009928",null,90095684,90107086,"+",92460,"downstream"]
["chr2","LNC_002040","XLOC_020044","lncRNA",204897424,204897867,"-","Zm00001d006333_T001","Zm00001d006333","sp|Q940M4|OCT7_ARATH Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana GN=OCT7 PE=2 SV=1//9.42037e-172",204940530,204943456,"+",42662,"upstream"]
["chr2","LNC_002043","XLOC_020095","lncRNA",207822439,207822731,"-","Zm00001d006428_T010","Zm00001d006428","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.80776e-25",207695842,207743747,"+",78691,"downstream"]
["chr2","LNC_002045","XLOC_020100","lncRNA",208156910,208157157,"-","Zm00001d006438_T023","Zm00001d006438","sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2//2.31592e-35",208170874,208186732,"+",13716,"upstream"]
["chr2","LNC_002046","XLOC_020153","lncRNA",210712614,210717792,"-","Zm00001d006541_T005","Zm00001d006541","sp|A0L5U1|RL28_MAGMM 50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=rpmB PE=3 SV=1//1.98427e-10",210707329,210709174,"-",3439,"upstream"]
["chr2","LNC_002047","XLOC_020153","lncRNA",210712760,210717792,"-","Zm00001d006538_T001","Zm00001d006538","sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1//2.01807e-16",210696604,210699346,"+",13413,"downstream"]
["chr2","LNC_002049","XLOC_020162","lncRNA",210930797,210931072,"-","Zm00001d006552_T003","Zm00001d006552",null,210871304,210879532,"+",51264,"downstream"]
["chr2","LNC_002049","XLOC_020162","lncRNA",210930797,210931072,"-","Zm00001d006552_T010","Zm00001d006552",null,210871324,210879399,"+",51397,"downstream"]
["chr4","LNC_003275","XLOC_032506","lncRNA",152585498,152585863,"-","Zm00001d051308_T009","Zm00001d051308","sp|Q8S950|NACK1_TOBAC Kinesin-like protein NACK1 OS=Nicotiana tabacum GN=NACK1 PE=1 SV=1//3.46121e-46",152675943,152682002,"-",90079,"downstream"]
["chr4","LNC_003278","XLOC_032575","lncRNA",156115115,156115329,"-","Zm00001d051366_T001","Zm00001d051366",null,156035646,156037482,"+",77632,"downstream"]
["chr7","LNC_004674","XLOC_046893","lncRNA",52698304,52698647,"+","Zm00001d019706_T012","Zm00001d019706","sp|Q54DD7|UNC50_DICDI Protein unc-50 homolog OS=Dictyostelium discoideum GN=DDB_G0292320 PE=3 SV=1//2.27476e-06",52677645,52682422,"+",15881,"downstream"]
["chr7","LNC_004677","XLOC_046900","lncRNA",53727762,53728075,"+","Zm00001d019724_T033","Zm00001d019724","sp|Q9ZT42|RHF2A_ARATH E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1//1.24751e-20",53793997,53799860,"+",65921,"upstream"]
["chrB73V4_ctg10","LNC_006165","XLOC_061491","lncRNA",600752,601433,"+","Zm00001d000065_T001","Zm00001d000065",null,633830,634595,"-",32396,"downstream"]
["chr3","LNC_002625","XLOC_025880","lncRNA",141499533,141499837,"-","Zm00001d041864_T001","Zm00001d041864","sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=2 SV=1//3.10472e-07",141457405,141459559,"-",39973,"upstream"]
["chr9","LNC_006162","XLOC_061454","lncRNA",157804254,157804545,"-","Zm00001d048527_T010","Zm00001d048527","sp|A2XBL9|HOX10_ORYSI Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica GN=HOX10 PE=2 SV=2//0",157816034,157823882,"-",11488,"downstream"]
["chr9","LNC_006161","XLOC_061421","lncRNA",156855254,156855491,"-","Zm00001d048471_T002","Zm00001d048471","sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1//1.0653e-180",156890330,156894199,"-",34838,"downstream"]
["chr9","LNC_006161","XLOC_061421","lncRNA",156855254,156855491,"-","Zm00001d048473_T001","Zm00001d048473","sp|Q42551|SCE1_ARATH SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1//9.92781e-21",156924709,156930988,"-",69217,"downstream"]
["chr5","LNC_003874","XLOC_039346","lncRNA",117188541,117191268,"-","Zm00001d001626_T001","Zm00001d001626",null,117133907,117134432,"-",54108,"upstream"]
["chr1","LNC_000379","XLOC_003978","lncRNA",272320605,272320987,"+","Zm00001d033732_T008","Zm00001d033732","sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1//3.46567e-09",272377837,272379164,"+",56849,"upstream"]
["chr1","LNC_000371","XLOC_003910","lncRNA",268325629,268325921,"+","Zm00001d033600_T002","Zm00001d033600",null,268255063,268259032,"+",66596,"downstream"]
["chr1","LNC_000373","XLOC_003930","lncRNA",269256116,269256562,"+","Zm00001d033639_T001","Zm00001d033639",null,269341733,269341805,"-",85170,"downstream"]
["chr1","LNC_000376","XLOC_003947","lncRNA",269875583,269875830,"+","Zm00001d033656_T001","Zm00001d033656",null,269801738,269802545,"+",73037,"downstream"]
["chr1","LNC_000376","XLOC_003947","lncRNA",269875583,269875830,"+","Zm00001d033655_T002","Zm00001d033655","sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2//1.19359e-06",269775420,269798910,"-",76672,"upstream"]
["chr1","LNC_000377","XLOC_003948","lncRNA",269879884,269880107,"+","Zm00001d033657_T015","Zm00001d033657","sp|Q8LPU4|HAT1_MAIZE Histone acetyltransferase type B catalytic subunit OS=Zea mays GN=HAT1 PE=1 SV=2//0",269826665,269833553,"-",46330,"upstream"]
["chr1","LNC_000377","XLOC_003948","lncRNA",269879884,269880107,"+","Zm00001d033663_T002","Zm00001d033663",null,269976126,269979718,"+",96018,"upstream"]
["chr8","LNC_005330","XLOC_053540","lncRNA",164284966,164286125,"+","Zm00001d011913_T005","Zm00001d011913","sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1//1.44697e-138",164362908,164368379,"-",76782,"downstream"]
["chr8","LNC_005330","XLOC_053540","lncRNA",164284966,164286125,"+","Zm00001d011913_T004","Zm00001d011913","sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1//1.44697e-138",164362908,164367649,"-",76782,"downstream"]
["chr10","LNC_001298","XLOC_012898","lncRNA",130366399,130366639,"-","Zm00001d025816_T006","Zm00001d025816","sp|Q84LK0|MSH1_ARATH DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana GN=MSH1 PE=1 SV=1//0",130399901,130438462,"-",33261,"downstream"]
["chr10","LNC_001295","XLOC_012858","lncRNA",128422835,128444626,"-","Zm00001d025752_T008","Zm00001d025752","sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1//3.13653e-27",128391728,128395884,"-",26950,"upstream"]
["chr10","LNC_001297","XLOC_012868","lncRNA",129007847,129008231,"-","Zm00001d025765_T005","Zm00001d025765","sp|Q8VZ52|ATG10_ARATH Ubiquitin-like-conjugating enzyme ATG10 OS=Arabidopsis thaliana GN=ATG10 PE=1 SV=1//2.16928e-27",128935082,128936792,"-",71054,"upstream"]
["chr10","LNC_001293","XLOC_012840","lncRNA",127705023,127705309,"-","Zm00001d025727_T010","Zm00001d025727","sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7 PE=2 SV=1//1.84081e-179",127668430,127674986,"-",30036,"upstream"]
["chr6","LNC_004066","XLOC_041207","lncRNA",23229727,23229956,"+","Zm00001d035363_T001","Zm00001d035363",null,23249144,23250184,"+",19187,"upstream"]
["chr6","LNC_004063","XLOC_041193","lncRNA",22593300,22635276,"+","Zm00001d035346_T120","Zm00001d035346","sp|Q84ZX8|SPP2_MAIZE Sucrose-phosphatase 2 OS=Zea mays GN=SPP2 PE=1 SV=1//2.47258e-35",22716717,22744583,"-",81440,"downstream"]
["chr6","LNC_004063","XLOC_041193","lncRNA",22593300,22635276,"+","Zm00001d035346_T063","Zm00001d035346","sp|Q84ZX8|SPP2_MAIZE Sucrose-phosphatase 2 OS=Zea mays GN=SPP2 PE=1 SV=1//2.47258e-35",22716714,22725057,"-",81437,"downstream"]
["chr6","LNC_004063","XLOC_041193","lncRNA",22593300,22635276,"+","Zm00001d035346_T072","Zm00001d035346","sp|Q84ZX8|SPP2_MAIZE Sucrose-phosphatase 2 OS=Zea mays GN=SPP2 PE=1 SV=1//2.47258e-35",22716714,22741017,"-",81437,"downstream"]
["chr6","LNC_004063","XLOC_041193","lncRNA",22593300,22635276,"+","Zm00001d035346_T143","Zm00001d035346","sp|Q84ZX8|SPP2_MAIZE Sucrose-phosphatase 2 OS=Zea mays GN=SPP2 PE=1 SV=1//2.47258e-35",22716724,22729022,"-",81447,"downstream"]
["chr6","LNC_004063","XLOC_041193","lncRNA",22593300,22635276,"+","Zm00001d035346_T033","Zm00001d035346","sp|Q84ZX8|SPP2_MAIZE Sucrose-phosphatase 2 OS=Zea mays GN=SPP2 PE=1 SV=1//2.47258e-35",22716633,22744583,"-",81356,"downstream"]
["chr10","LNC_000962","XLOC_009782","lncRNA",59289571,59289801,"+","Zm00001d023107_T001","Zm00001d023107",null,59355020,59356349,"+",65218,"upstream"]
["chr10","LNC_000968","XLOC_009831","lncRNA",63057084,63057361,"+","Zm00001d024307_T007","Zm00001d024307","sp|Q940S3|UAP1_ARATH UDP-N-acetylglucosamine diphosphorylase 1 OS=Arabidopsis thaliana GN=GLCNAC1PUT1 PE=1 SV=1//0",63091733,63095859,"+",34371,"upstream"]
["chr5","LNC_003595","XLOC_036101","lncRNA",130979934,130980231,"+","Zm00001d015914_T006","Zm00001d015914","sp|Q6K4V2|SWET4_ORYSJ Bidirectional sugar transporter SWEET4 OS=Oryza sativa subsp. japonica GN=SWEET4 PE=2 SV=1//1.30606e-110",130947371,130950710,"+",29223,"downstream"]
["chr3","LNC_002238","XLOC_022143","lncRNA",98162314,98162770,"+","Zm00001d041112_T002","Zm00001d041112","sp|Q08480|KAD4_ORYSJ Adenylate kinase 4 OS=Oryza sativa subsp. japonica GN=ADK-B PE=2 SV=1//2.63193e-159",98130861,98139735,"-",22578,"upstream"]
["chr4","LNC_003043","XLOC_030303","lncRNA",215989752,215990033,"+","Zm00001d053143_T001","Zm00001d053143","sp|Q39134|AAP3_ARATH Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2//0",215990887,215992468,"-",853,"downstream"]
["chr1","LNC_000583","XLOC_006350","lncRNA",115381901,115382737,"-","Zm00001d030239_T029","Zm00001d030239","sp|O94387|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A10.10c PE=3 SV=1//6.80294e-77",115448709,115456662,"-",65971,"downstream"]
["chr1","LNC_000581","XLOC_006338","lncRNA",114712655,114712962,"-","Zm00001d030230_T023","Zm00001d030230","sp|O23826|K125_TOBAC 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1//3.15585e-43",114672050,114679939,"-",32715,"upstream"]
["chr2","LNC_001769","XLOC_017642","lncRNA",17704101,17704433,"-","Zm00001d002636_T001","Zm00001d002636",null,17659671,17660619,"+",43481,"downstream"]
["chr2","LNC_001765","XLOC_017596","lncRNA",15275054,15277715,"-","Zm00001d002560_T001","Zm00001d002560","sp|Q9LTT9|VCR_ARATH Varicose-related protein OS=Arabidopsis thaliana GN=VCR PE=2 SV=1//1.32591e-78",15366760,15371345,"-",89044,"downstream"]
["chr2","LNC_001763","XLOC_017581","lncRNA",14435678,14436281,"-","Zm00001d002511_T003","Zm00001d002511","sp|P61819|CBIX_METMP Sirohydrochlorin cobaltochelatase OS=Methanococcus maripaludis (strain S2 / LL) GN=cbiX PE=3 SV=1//3.81267e-14",14409918,14417088,"+",18589,"downstream"]
["chr7","LNC_004806","XLOC_048081","lncRNA",155378572,155378950,"+","Zm00001d021542_T001","Zm00001d021542",null,155445924,155447228,"-",66973,"downstream"]
["chr7","LNC_004804","XLOC_048062","lncRNA",154437270,154463980,"+","Zm00001d021508_T001","Zm00001d021508","sp|O23515|RL151_ARATH 60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1//2.69028e-112",154481841,154484342,"+",17860,"upstream"]
["chr7","LNC_004803","XLOC_048062","lncRNA",154437268,154463980,"+","Zm00001d021508_T001","Zm00001d021508","sp|O23515|RL151_ARATH 60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1//2.69028e-112",154481841,154484342,"+",17860,"upstream"]
["chr7","LNC_004808","XLOC_048087","lncRNA",155428042,155428867,"+","Zm00001d021541_T042","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155410616,155420312,"+",7729,"downstream"]
["chr7","LNC_004808","XLOC_048087","lncRNA",155428042,155428867,"+","Zm00001d021541_T038","Zm00001d021541","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.35351e-24",155406764,155420422,"+",7619,"downstream"]
["chr1","LNC_000263","XLOC_002657","lncRNA",195288688,195289209,"+","Zm00001d031581_T001","Zm00001d031581","sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2//2.01532e-13",195388615,195397327,"+",99405,"upstream"]
["chr9","LNC_005711","XLOC_057301","lncRNA",32247742,32248131,"+","Zm00001d045665_T003","Zm00001d045665","sp|Q40742|RAD23_ORYSJ Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2//2.81694e-109",32284202,32295054,"+",36070,"upstream"]
["chr2","LNC_001359","XLOC_013496","lncRNA",2115086,2117153,"+","Zm00001d001864_T003","Zm00001d001864","sp|Q9LIH6|UNG_ARATH Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana GN=UNG PE=1 SV=1//1.6938e-39",2066590,2076640,"+",38445,"downstream"]
["chr2","LNC_001358","XLOC_013493","lncRNA",2061425,2062578,"+","Zm00001d001866_T012","Zm00001d001866",null,2102121,2107112,"+",39542,"upstream"]
["chr2","LNC_001358","XLOC_013493","lncRNA",2061425,2062578,"+","Zm00001d001861_T003","Zm00001d001861",null,2048654,2054225,"+",7199,"downstream"]
["chr2","LNC_001356","XLOC_013482","lncRNA",1760181,1760415,"+","Zm00001d001843_T001","Zm00001d001843","sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica GN=TRX-X PE=2 SV=1//2.36156e-65",1710917,1712421,"-",47759,"upstream"]
["chr2","LNC_001356","XLOC_013482","lncRNA",1760181,1760415,"+","Zm00001d001838_T001","Zm00001d001838","sp|Q7XKC4|Y4765_ORYSJ Putative B3 domain-containing protein Os04g0676650 OS=Oryza sativa subsp. japonica GN=Os04g0676650 PE=3 SV=2//2.37987e-60",1675459,1681671,"+",78509,"downstream"]
["chr10","LNC_001353","XLOC_013410","lncRNA",149636017,149638321,"-","Zm00001d026664_T001","Zm00001d026664","sp|Q9SJ52|YLS9_ARATH Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1//3.05756e-09",149609177,149610110,"-",25906,"upstream"]
["chr10","LNC_001352","XLOC_013345","lncRNA",147971634,147972007,"-","Zm00001d026548_T049","Zm00001d026548","sp|Q7XPJ0|KCBP_ORYSJ Kinesin-like calmodulin-binding protein homolog OS=Oryza sativa subsp. japonica GN=Os04g0666900 PE=2 SV=1//7.2345e-20",147989463,148003035,"-",17455,"downstream"]
["chr10","LNC_001352","XLOC_013345","lncRNA",147971634,147972007,"-","Zm00001d026543_T009","Zm00001d026543","sp|Q7XPK1|C3H31_ORYSJ Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN=Os04g0665700 PE=2 SV=1//2.93395e-127",147953390,147957884,"+",13749,"downstream"]
["chr1","LNC_000264","XLOC_002696","lncRNA",197218025,197218348,"+","Zm00001d031642_T005","Zm00001d031642","sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1//8.53484e-45",197126064,197131057,"+",86967,"downstream"]
["chr8","LNC_005298","XLOC_053149","lncRNA",143155353,143155678,"+","Zm00001d011212_T001","Zm00001d011212","sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana GN=BHLH41 PE=3 SV=1//1.40546e-16",143076291,143081577,"-",73775,"upstream"]
["chr8","LNC_005298","XLOC_053149","lncRNA",143155353,143155678,"+","Zm00001d011217_T001","Zm00001d011217",null,143248933,143249868,"+",93254,"upstream"]
["chr8","LNC_005293","XLOC_052998","lncRNA",135488835,135489458,"+","Zm00001d010974_T046","Zm00001d010974","sp|Q6L4L4|SIZ1_ORYSJ E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1//1.32393e-13",135530279,135542035,"-",40820,"downstream"]
["chr8","LNC_005293","XLOC_052998","lncRNA",135488835,135489458,"+","Zm00001d010974_T058","Zm00001d010974","sp|Q6L4L4|SIZ1_ORYSJ E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1//1.32393e-13",135530315,135542061,"-",40856,"downstream"]
["chr8","LNC_005297","XLOC_053148","lncRNA",143118386,143118863,"+","Zm00001d011212_T001","Zm00001d011212","sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana GN=BHLH41 PE=3 SV=1//1.40546e-16",143076291,143081577,"-",36808,"upstream"]
["chr8","LNC_005297","XLOC_053148","lncRNA",143118386,143118863,"+","Zm00001d011210_T001","Zm00001d011210","sp|Q38932|LCYE_ARATH Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2//1.51308e-115",143020695,143027838,"+",90547,"downstream"]
["chr8","LNC_005297","XLOC_053148","lncRNA",143118386,143118863,"+","Zm00001d011210_T035","Zm00001d011210","sp|Q38932|LCYE_ARATH Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2//1.51308e-115",143024807,143027758,"+",90627,"downstream"]
["chr4","LNC_002950","XLOC_029129","lncRNA",140593362,140593657,"+","Zm00001d051069_T001","Zm00001d051069","sp|A2VEI2|MICU1_DROME Calcium uptake protein 1 homolog, mitochondrial OS=Drosophila melanogaster GN=CG4495 PE=2 SV=1//7.16954e-44",140513011,140519548,"+",73813,"downstream"]
["chr4","LNC_002954","XLOC_029131","lncRNA",140804953,140808838,"+","Zm00001d051075_T002","Zm00001d051075","sp|Q9M2J5|MCC16_ARATH MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana GN=At3g58210 PE=3 SV=1//8.94055e-16",140677217,140705861,"-",99091,"upstream"]
["chr2","LNC_001973","XLOC_019351","lncRNA",160647163,160647544,"-","Zm00001d005140_T003","Zm00001d005140","sp|Q8GYD2|MND1_ARATH Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana GN=MND1 PE=1 SV=1//1.64753e-12",160691580,160697757,"+",44035,"upstream"]
["chr2","LNC_001975","XLOC_019389","lncRNA",163106475,163106681,"-","Zm00001d005195_T002","Zm00001d005195",null,163095669,163101289,"+",5185,"downstream"]
["chr2","LNC_001975","XLOC_019389","lncRNA",163106475,163106681,"-","Zm00001d005195_T010","Zm00001d005195",null,163095777,163101289,"+",5185,"downstream"]
["chr2","LNC_001976","XLOC_019414","lncRNA",165534935,165535224,"-","Zm00001d005244_T009","Zm00001d005244","sp|P25032|EMBP1_WHEAT DNA-binding protein EMBP-1 OS=Triticum aestivum PE=1 SV=1//4.8303e-06",165521174,165527127,"-",7807,"upstream"]
["chr1","LNC_000001","XLOC_000005","lncRNA",324748,325283,"+","Zm00001d027248_T001","Zm00001d027248",null,328329,332172,"-",3045,"downstream"]
["chr1","LNC_000007","XLOC_000054","lncRNA",3064138,3064421,"+","Zm00001d027332_T001","Zm00001d027332","sp|A2XBN5|NLTPX_ORYSI Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2//5.23481e-29",3095308,3095604,"-",30886,"downstream"]
["chr1","LNC_000007","XLOC_000054","lncRNA",3064138,3064421,"+","Zm00001d027333_T003","Zm00001d027333","sp|Q8LPK4|AP2A2_ARATH AP-2 complex subunit alpha-2 OS=Arabidopsis thaliana GN=ALPHAC-AD PE=1 SV=1//6.64309e-65",3104159,3122716,"+",39737,"upstream"]
["chr1","LNC_000005","XLOC_000026","lncRNA",1402619,1402844,"+","Zm00001d027278_T030","Zm00001d027278","sp|A0JP85|CNOT1_XENTR CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=1//4.03292e-20",1492515,1533105,"+",89670,"upstream"]
["chr1","LNC_000005","XLOC_000026","lncRNA",1402619,1402844,"+","Zm00001d027278_T081","Zm00001d027278","sp|A0JP85|CNOT1_XENTR CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=1//4.03292e-20",1498940,1533074,"+",96095,"upstream"]
["chr1","LNC_000009","XLOC_000086","lncRNA",4121326,4121921,"+","Zm00001d027392_T025","Zm00001d027392","sp|Q9SFU6|CALS9_ARATH Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=2//0",4220927,4296146,"+",99005,"upstream"]
["chr7","LNC_004652","XLOC_046662","lncRNA",30684289,30684567,"+","Zm00001d019376_T011","Zm00001d019376","sp|Q69R21|ALDO4_ORYSJ Probable aldehyde oxidase 4 OS=Oryza sativa subsp. japonica GN=Os07g0282300 PE=2 SV=1//2.73937e-21",30737572,30745574,"+",53004,"upstream"]
["chr7","LNC_004654","XLOC_046679","lncRNA",31867850,31868203,"+","Zm00001d019397_T004","Zm00001d019397",null,31782324,31804613,"+",63236,"downstream"]
["chr2","LNC_001511","XLOC_014852","lncRNA",78522756,78523264,"+","Zm00001d004042_T001","Zm00001d004042","sp|P28643|FABG_CUPLA 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1//7.38247e-78",78528269,78549727,"+",5004,"upstream"]
["chr1","LNC_000424","XLOC_004652","lncRNA",305661350,305661559,"+","Zm00001d034925_T001","Zm00001d034925","sp|Q9MBC1|3AT_PERFR Anthocyanidin 3-O-glucoside 6&apos;&apos;-O-acyltransferase (Fragment) OS=Perilla frutescens PE=1 SV=1//2.41094e-35",305698918,305700369,"-",37358,"downstream"]
["chr5","LNC_003852","XLOC_039227","lncRNA",99962972,99963403,"-","Zm00001d015589_T001","Zm00001d015589","sp|A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1//4.01154e-115",100023067,100024804,"+",59663,"upstream"]
["chr5","LNC_003853","XLOC_039240","lncRNA",101011013,101011327,"-","Zm00001d015609_T004","Zm00001d015609","sp|Q9LVN0|GPDL7_ARATH Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana GN=GDPDL7 PE=2 SV=1//0",100949186,100952577,"-",58435,"upstream"]
["chr1","LNC_000393","XLOC_004169","lncRNA",282944132,282944611,"+","Zm00001d034061_T002","Zm00001d034061","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//1.0662e-37",282849124,282849647,"-",94484,"upstream"]
["chr1","LNC_000390","XLOC_004132","lncRNA",280920316,280920593,"+","Zm00001d034004_T028","Zm00001d034004","sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1 OS=Arabidopsis thaliana GN=IDM1 PE=1 SV=1//9.56439e-24",280900102,280909268,"+",11047,"downstream"]
["chr1","LNC_000396","XLOC_004215","lncRNA",285215580,285224579,"+","Zm00001d034150_T001","Zm00001d034150","sp|Q5VSB7|SODF2_ORYSJ Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0143000 PE=2 SV=1//1.81646e-44",285138708,285141599,"-",73980,"upstream"]
["chr1","LNC_000397","XLOC_004256","lncRNA",287024721,287025256,"+","Zm00001d034222_T002","Zm00001d034222",null,287046431,287047266,"-",21174,"downstream"]
["chr3","LNC_002721","XLOC_027034","lncRNA",210541989,210542288,"-","Zm00001d043800_T002","Zm00001d043800","sp|P0C5E2|Y1839_ARATH Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=2 SV=2//5.09938e-129",210461398,210469698,"+",72290,"downstream"]
["chr3","LNC_002721","XLOC_027034","lncRNA",210541989,210542288,"-","Zm00001d043805_T020","Zm00001d043805","sp|O14099|YERG_SCHPO Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.16 PE=3 SV=1//4.81264e-16",210581968,210592259,"+",39679,"upstream"]
["chr3","LNC_002722","XLOC_027059","lncRNA",211835353,211836849,"-","Zm00001d043845_T045","Zm00001d043845","sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0681900 PE=2 SV=1//1.10361e-131",211902717,211913531,"+",65867,"upstream"]
["chr3","LNC_002722","XLOC_027059","lncRNA",211835353,211836849,"-","Zm00001d043845_T074","Zm00001d043845","sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0681900 PE=2 SV=1//1.10361e-131",211905997,211913626,"+",69147,"upstream"]
["chr3","LNC_002725","XLOC_027090","lncRNA",213284980,213285244,"-","Zm00001d043894_T001","Zm00001d043894",null,213246925,213248601,"+",36378,"downstream"]
["chr3","LNC_002726","XLOC_027098","lncRNA",213734172,213734690,"-","Zm00001d043911_T002","Zm00001d043911","sp|Q5QMP3|DI193_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1//9.52884e-94",213661992,213665391,"-",68780,"upstream"]
["chr4","LNC_002893","XLOC_028739","lncRNA",94358664,94359493,"+","Zm00001d050501_T004","Zm00001d050501","sp|Q6NPN9|DWA2_ARATH WD repeat-containing protein DWA2 OS=Arabidopsis thaliana GN=DWA2 PE=1 SV=1//6.92787e-47",94344461,94348576,"-",10087,"upstream"]
["chr5","LNC_004006","XLOC_040644","lncRNA",212213945,212214679,"-","Zm00001d018014_T015","Zm00001d018014","sp|Q6YUL8|BC2_ORYSJ Kinesin-like protein BC2 OS=Oryza sativa subsp. japonica GN=BC2 PE=1 SV=1//2.75371e-29",212108828,212116194,"-",97750,"upstream"]
["chr5","LNC_004007","XLOC_040651","lncRNA",212272441,212272724,"-","Zm00001d018028_T001","Zm00001d018028","sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24 PE=1 SV=2//3.31446e-43",212372579,212374838,"+",99854,"upstream"]
["chr5","LNC_004005","XLOC_040641","lncRNA",212083922,212086724,"-","Zm00001d018014_T019","Zm00001d018014","sp|Q6YUL8|BC2_ORYSJ Kinesin-like protein BC2 OS=Oryza sativa subsp. japonica GN=BC2 PE=1 SV=1//2.75371e-29",212108828,212117132,"-",22103,"downstream"]
["chr5","LNC_004002","XLOC_040595","lncRNA",210286836,210288011,"-","Zm00001d017926_T009","Zm00001d017926",null,210202941,210207366,"+",79469,"downstream"]
["chr5","LNC_004000","XLOC_040594","lncRNA",210280395,210288883,"-","Zm00001d017925_T011","Zm00001d017925","sp|Q6YWQ4|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1//3.24168e-144",210190214,210194708,"+",85686,"downstream"]
["chr5","LNC_004000","XLOC_040594","lncRNA",210280395,210288883,"-","Zm00001d017926_T010","Zm00001d017926",null,210202941,210207440,"+",72954,"downstream"]
["chr1","LNC_000088","XLOC_001265","lncRNA",66354481,66354727,"+","Zm00001d029331_T006","Zm00001d029331","sp|O80612|APY6_ARATH Probable apyrase 6 OS=Arabidopsis thaliana GN=APY6 PE=2 SV=2//1.19895e-43",66254410,66255357,"+",99123,"downstream"]
["chr1","LNC_000088","XLOC_001265","lncRNA",66354481,66354727,"+","Zm00001d029336_T003","Zm00001d029336","sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2 OS=Arabidopsis thaliana GN=At1g26850 PE=2 SV=2//0",66388200,66393059,"+",33472,"upstream"]
["chr9","LNC_005717","XLOC_057372","lncRNA",38761964,38770747,"+","Zm00001d045783_T001","Zm00001d045783","sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3//2.77646e-55",38793950,38813470,"-",23202,"downstream"]
["chr9","LNC_005717","XLOC_057372","lncRNA",38761964,38770747,"+","Zm00001d045783_T055","Zm00001d045783","sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3//2.77646e-55",38794293,38813545,"-",23545,"downstream"]
["chr9","LNC_005841","XLOC_058303","lncRNA",120681425,120681999,"+","Zm00001d047167_T003","Zm00001d047167","sp|Q9SLB9|VOZ2_ARATH Transcription factor VOZ2 OS=Arabidopsis thaliana GN=VOZ2 PE=1 SV=2//2.253e-08",120747701,120753552,"-",65701,"downstream"]
["chr9","LNC_005844","XLOC_058314","lncRNA",121045781,121047432,"+","Zm00001d047181_T006","Zm00001d047181","sp|B3H6K1|Y4791_ARATH Uncharacterized protein At4g17910 OS=Arabidopsis thaliana GN=At4g17910 PE=2 SV=2//3.79339e-14",121092373,121098964,"+",44940,"upstream"]
["chr9","LNC_005846","XLOC_058329","lncRNA",121561030,121561485,"+","Zm00001d047196_T001","Zm00001d047196",null,121652562,121652634,"+",91076,"upstream"]
["chr1","LNC_000086","XLOC_001257","lncRNA",65892189,65892431,"+","Zm00001d029324_T004","Zm00001d029324","sp|P55217|CGS1_ARATH Cystathionine gamma-synthase 1, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=1 SV=3//6.31238e-13",65941276,65945017,"-",48844,"downstream"]
["chr1","LNC_000084","XLOC_001253","lncRNA",65562746,65563113,"+","Zm00001d029312_T001","Zm00001d029312",null,65584782,65586417,"-",21668,"downstream"]
["chr2","LNC_001706","XLOC_016702","lncRNA",222327185,222327802,"+","Zm00001d007096_T006","Zm00001d007096","sp|Q5VSB7|SODF2_ORYSJ Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0143000 PE=2 SV=1//1.56898e-26",222237735,222243756,"+",83428,"downstream"]
["chr2","LNC_001707","XLOC_016703","lncRNA",222329063,222349613,"+","Zm00001d007096_T005","Zm00001d007096","sp|Q5VSB7|SODF2_ORYSJ Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0143000 PE=2 SV=1//1.56898e-26",222237597,222243820,"+",85242,"downstream"]
["chr2","LNC_001705","XLOC_016681","lncRNA",221122327,221124753,"+","Zm00001d007064_T003","Zm00001d007064","sp|A6TI29|BGAL2_KLEP7 Beta-galactosidase 2 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=lacZ2 PE=3 SV=1//7.62513e-12",221084621,221090754,"+",31572,"downstream"]
["chr2","LNC_001703","XLOC_016628","lncRNA",219270763,219271124,"+","Zm00001d006910_T017","Zm00001d006910",null,219224761,219227425,"-",43337,"upstream"]
["chr2","LNC_001700","XLOC_016593","lncRNA",217868690,217870698,"+","Zm00001d006855_T009","Zm00001d006855","sp|Q54DU5|Y2028_DICDI von Willebrand factor A domain-containing protein DDB_G0292028 OS=Dictyostelium discoideum GN=DDB_G0292028 PE=3 SV=1//1.21524e-15",217965715,217972562,"+",95016,"upstream"]
["chr2","LNC_001701","XLOC_016594","lncRNA",217957124,217957686,"+","Zm00001d006861_T010","Zm00001d006861",null,218041412,218048827,"-",83725,"downstream"]
["chr2","LNC_001708","XLOC_016722","lncRNA",223095533,223102136,"+","Zm00001d007133_T002","Zm00001d007133","sp|Q7XI75|CARM1_ORYSJ Probable histone-arginine methyltransferase CARM1 OS=Oryza sativa subsp. japonica GN=CARM1 PE=2 SV=1//1.22127e-89",223062728,223070243,"+",25289,"downstream"]
["chr6","LNC_004398","XLOC_044130","lncRNA",50624246,50624476,"-","Zm00001d035800_T001","Zm00001d035800",null,50541060,50542769,"+",81476,"downstream"]
["chr7","LNC_004821","XLOC_048221","lncRNA",162748019,162748283,"+","Zm00001d021770_T093","Zm00001d021770","sp|Q06572|AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2//9.26299e-09",162755308,162762571,"-",7024,"downstream"]
["chr7","LNC_004821","XLOC_048221","lncRNA",162748019,162748283,"+","Zm00001d021770_T009","Zm00001d021770","sp|Q06572|AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2//9.26299e-09",162753397,162759103,"-",5113,"downstream"]
["chr7","LNC_004824","XLOC_048240","lncRNA",163539923,163540595,"+","Zm00001d021810_T043","Zm00001d021810","sp|Q6R2K3|SRF3_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=2 SV=1//3.3103e-61",163448518,163454304,"-",85618,"upstream"]
["chr7","LNC_004827","XLOC_048282","lncRNA",165610543,165610951,"+","Zm00001d021893_T010","Zm00001d021893","sp|Q8BKC5|IPO5_MOUSE Importin-5 OS=Mus musculus GN=Ipo5 PE=1 SV=3//3.7882e-31",165532401,165542515,"-",68027,"upstream"]
["chr2","LNC_001377","XLOC_013701","lncRNA",7503817,7504124,"+","Zm00001d002185_T007","Zm00001d002185","sp|Q5PP37|ATXR2_ARATH Histone-lysine N-methyltransferase ATXR2 OS=Arabidopsis thaliana GN=ATXR2 PE=2 SV=1//6.05292e-11",7546324,7550389,"-",42199,"downstream"]
["chr2","LNC_001373","XLOC_013687","lncRNA",7104441,7105155,"+","Zm00001d002164_T016","Zm00001d002164","sp|Q9S827|SDHB1_ORYSJ Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-1 PE=1 SV=1//8.17234e-32",7002272,7013167,"+",91273,"downstream"]
["chr2","LNC_001373","XLOC_013687","lncRNA",7104441,7105155,"+","Zm00001d002164_T007","Zm00001d002164","sp|Q9S827|SDHB1_ORYSJ Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-1 PE=1 SV=1//8.17234e-32",7002222,7006084,"+",98356,"downstream"]
["chr2","LNC_001372","XLOC_013682","lncRNA",6959133,6959799,"+","Zm00001d002164_T019","Zm00001d002164","sp|Q9S827|SDHB1_ORYSJ Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-1 PE=1 SV=1//8.17234e-32",7002322,7012657,"+",42522,"upstream"]
["chr2","LNC_001371","XLOC_013673","lncRNA",6859102,6859361,"+","Zm00001d002149_T002","Zm00001d002149","sp|Q9SKT6|GAUTA_ARATH Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2//0",6819751,6827537,"-",31564,"upstream"]
["chr2","LNC_001370","XLOC_013669","lncRNA",6774087,6774385,"+","Zm00001d002153_T003","Zm00001d002153","sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus GN=Hnrnpul1 PE=1 SV=1//2.26338e-75",6865780,6869032,"+",91394,"upstream"]
["chr2","LNC_001378","XLOC_013722","lncRNA",8308712,8308958,"+","Zm00001d002216_T002","Zm00001d002216","sp|Q9ZPS0|FBX7_ARATH F-box only protein 7 OS=Arabidopsis thaliana GN=FBX7 PE=2 SV=3//3.15656e-12",8322326,8325836,"+",13367,"upstream"]
["chr5","LNC_003626","XLOC_036360","lncRNA",157122628,157135547,"+","Zm00001d001669_T001","Zm00001d001669",null,157135876,157136336,"-",328,"downstream"]
["chr8","LNC_005271","XLOC_052757","lncRNA",119701915,119702544,"+","Zm00001d010537_T004","Zm00001d010537","sp|Q9MAX5|COPZ1_ORYSJ Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica GN=COPZ1 PE=2 SV=1//2.59681e-23",119697821,119699902,"-",2012,"upstream"]
["chr8","LNC_005277","XLOC_052842","lncRNA",124287006,124294210,"+","Zm00001d010684_T006","Zm00001d010684","sp|Q6L4V0|MSH5_ORYSJ DNA mismatch repair protein MSH5 OS=Oryza sativa subsp. japonica GN=MSH5 PE=2 SV=1//1.38534e-18",124241261,124252901,"+",34104,"downstream"]
["chr7","LNC_004820","XLOC_048216","lncRNA",162599596,162599819,"+","Zm00001d021765_T002","Zm00001d021765",null,162692924,162694367,"+",93104,"upstream"]
["chr4","LNC_002978","XLOC_029460","lncRNA",165529197,165529477,"+","Zm00001d051644_T009","Zm00001d051644","sp|F4J5S1|CLU_ARATH Clustered mitochondria protein OS=Arabidopsis thaliana GN=FMT PE=2 SV=1//1.7044e-49",165589599,165610881,"-",60121,"downstream"]
["chr4","LNC_002976","XLOC_029422","lncRNA",163236877,163237742,"+","Zm00001d051576_T001","Zm00001d051576","sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2//1.2974e-17",163283205,163288542,"+",45462,"upstream"]
["chr4","LNC_002970","XLOC_029304","lncRNA",156335511,156336178,"+","Zm00001d051376_T002","Zm00001d051376",null,156414419,156415562,"-",78240,"downstream"]
["chr2","LNC_001952","XLOC_019176","lncRNA",141262689,141263155,"-","Zm00001d000933_T001","Zm00001d000933",null,141328230,141328469,"+",65074,"upstream"]
["chr2","LNC_001957","XLOC_019231","lncRNA",147788979,147789201,"-","Zm00001d004898_T005","Zm00001d004898","sp|Q5Z880|HRD1_ORYSJ ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica GN=HRD1 PE=2 SV=1//7.33115e-74",147703086,147707641,"-",81337,"upstream"]
["chr2","LNC_001955","XLOC_019230","lncRNA",147787192,147788335,"-","Zm00001d004898_T016","Zm00001d004898","sp|Q5Z880|HRD1_ORYSJ ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica GN=HRD1 PE=2 SV=1//7.33115e-74",147703237,147707183,"-",80008,"upstream"]
["chr8","LNC_005404","XLOC_054409","lncRNA",22518318,22518761,"-","Zm00001d008851_T002","Zm00001d008851","sp|Q54WG0|DENR_DICDI Density-regulated protein homolog OS=Dictyostelium discoideum GN=denr PE=3 SV=1//4.27673e-20",22553594,22556240,"+",34832,"upstream"]
["chr1","LNC_000024","XLOC_000424","lncRNA",20103327,20103573,"+","Zm00001d028006_T001","Zm00001d028006",null,20028789,20032918,"-",70408,"upstream"]
["chr1","LNC_000020","XLOC_000234","lncRNA",10637683,10638107,"+","Zm00001d027667_T006","Zm00001d027667","sp|Q54GU0|ARSB_DICDI Putative transporter arsB OS=Dictyostelium discoideum GN=arsB PE=2 SV=1//5.6026e-62",10614693,10618139,"-",19543,"upstream"]
["chr1","LNC_000020","XLOC_000234","lncRNA",10637683,10638107,"+","Zm00001d027668_T001","Zm00001d027668",null,10624142,10624214,"+",13468,"downstream"]
["chr1","LNC_000028","XLOC_000455","lncRNA",21555268,21557158,"+","Zm00001d028045_T008","Zm00001d028045","sp|B0CM52|GMPPA_PAPAN Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1//2.17885e-24",21501893,21527021,"+",28246,"downstream"]
["chr1","LNC_000029","XLOC_000469","lncRNA",22094410,22094737,"+","Zm00001d028075_T006","Zm00001d028075","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//4.71952e-173",22053668,22059426,"-",34983,"upstream"]
["chr1","LNC_000029","XLOC_000469","lncRNA",22094410,22094737,"+","Zm00001d028075_T012","Zm00001d028075","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//4.71952e-173",22053669,22058226,"-",36183,"upstream"]
["chr7","LNC_004823","XLOC_048235","lncRNA",163159610,163159831,"+","Zm00001d021790_T009","Zm00001d021790","sp|Q0D5G4|Y7633_ORYSJ B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=3 SV=2//2.67977e-57",163070128,163078209,"+",81400,"downstream"]
["chr7","LNC_004635","XLOC_046493","lncRNA",18117273,18118511,"+","Zm00001d019124_T005","Zm00001d019124","sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1//0",18108843,18111164,"+",6108,"downstream"]
["chr7","LNC_004633","XLOC_046449","lncRNA",14763048,14768186,"+","Zm00001d019061_T018","Zm00001d019061","sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1//2.05227e-19",14732549,14747335,"-",15712,"upstream"]
["chr7","LNC_004633","XLOC_046449","lncRNA",14763048,14768186,"+","Zm00001d019061_T006","Zm00001d019061","sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1//2.05227e-19",14732531,14743570,"-",19477,"upstream"]
["chr2","LNC_001575","XLOC_015200","lncRNA",118189251,118191967,"+","Zm00001d004560_T001","Zm00001d004560","sp|Q10P01|LCB1A_ORYSJ Long chain base biosynthesis protein 1a OS=Oryza sativa subsp. japonica GN=Os03g0252800 PE=2 SV=1//1.92145e-178",118137849,118142873,"+",46377,"downstream"]
["chr2","LNC_001577","XLOC_015217","lncRNA",119283604,119286086,"+","Zm00001d004579_T001","Zm00001d004579","sp|Q8LNU5|NOC2L_ORYSJ Nucleolar complex protein 2 homolog OS=Oryza sativa subsp. japonica GN=Os10g0495500 PE=2 SV=1//2.20178e-116",119280715,119283042,"+",561,"downstream"]
["chr3","LNC_002378","XLOC_023545","lncRNA",199792803,199793058,"+","Zm00001d043434_T033","Zm00001d043434","sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE=1 SV=3//4.20398e-31",199733929,199758612,"-",34190,"upstream"]
["chr3","LNC_002372","XLOC_023492","lncRNA",196905345,196905635,"+","Zm00001d043335_T008","Zm00001d043335","sp|Q9FLH0|CRWN4_ARATH Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana GN=CRWN4 PE=1 SV=2//7.4773e-127",196984984,196991038,"+",79348,"upstream"]
["chr3","LNC_002373","XLOC_023493","lncRNA",196982899,196983113,"+","Zm00001d043335_T008","Zm00001d043335","sp|Q9FLH0|CRWN4_ARATH Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana GN=CRWN4 PE=1 SV=2//7.4773e-127",196984984,196991038,"+",1870,"upstream"]
["chr3","LNC_002376","XLOC_023539","lncRNA",199481574,199483280,"+","Zm00001d043428_T009","Zm00001d043428","sp|Q9S9U0|CALSB_ARATH Callose synthase 11 OS=Arabidopsis thaliana GN=CALS11 PE=2 SV=1//0",199525402,199531856,"+",42121,"upstream"]
["chr3","LNC_002377","XLOC_023544","lncRNA",199730721,199732736,"+","Zm00001d043434_T001","Zm00001d043434","sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE=1 SV=3//4.20398e-31",199733893,199758670,"-",1156,"downstream"]
["chr3","LNC_002375","XLOC_023515","lncRNA",198052656,198053082,"+","Zm00001d043376_T006","Zm00001d043376","sp|Q8H151|AAE13_ARATH Malonate--CoA ligase OS=Arabidopsis thaliana GN=AAE13 PE=1 SV=1//1.2311e-63",198076210,198095500,"-",23127,"downstream"]
["chr4","LNC_003363","XLOC_033590","lncRNA",213335567,213335963,"-","Zm00001d053092_T052","Zm00001d053092","sp|Q6YY75|NEK6_ORYSJ Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica GN=NEK6 PE=3 SV=2//6.37241e-23",213305321,213309312,"+",26254,"downstream"]
["chr4","LNC_003364","XLOC_033592","lncRNA",213340636,213341208,"-","Zm00001d053092_T013","Zm00001d053092","sp|Q6YY75|NEK6_ORYSJ Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica GN=NEK6 PE=3 SV=2//6.37241e-23",213303587,213309448,"+",31187,"downstream"]
["chr4","LNC_003364","XLOC_033592","lncRNA",213340636,213341208,"-","Zm00001d053092_T042","Zm00001d053092","sp|Q6YY75|NEK6_ORYSJ Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica GN=NEK6 PE=3 SV=2//6.37241e-23",213303694,213309493,"+",31142,"downstream"]
["chr1","LNC_000625","XLOC_006688","lncRNA",153444570,153444814,"-","Zm00001d030691_T001","Zm00001d030691","sp|P29766|RL8_SOLLC 60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1//1.01783e-171",153357400,153359291,"+",85278,"downstream"]
["chr3","LNC_002709","XLOC_026884","lncRNA",203504925,203505203,"-","Zm00001d043544_T003","Zm00001d043544","sp|Q7XUS2|ASB1_ORYSJ Anthranilate synthase beta subunit 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ASB1 PE=1 SV=1//1.7808e-17",203518737,203526214,"+",13533,"upstream"]
["chr3","LNC_002700","XLOC_026718","lncRNA",194222911,194223412,"-","Zm00001d043277_T005","Zm00001d043277","sp|O64728|STI_ARATH Protein STICHEL OS=Arabidopsis thaliana GN=STI PE=1 SV=2//1.15738e-07",194202527,194215311,"+",7599,"downstream"]
["chr3","LNC_002700","XLOC_026718","lncRNA",194222911,194223412,"-","Zm00001d043277_T012","Zm00001d043277","sp|O64728|STI_ARATH Protein STICHEL OS=Arabidopsis thaliana GN=STI PE=1 SV=2//1.15738e-07",194202950,194214910,"+",8000,"downstream"]
["chr5","LNC_004021","XLOC_040761","lncRNA",217007098,217007399,"-","Zm00001d018231_T002","Zm00001d018231","sp|Q7ZV90|PIF1_DANRE ATP-dependent DNA helicase PIF1 OS=Danio rerio GN=pif1 PE=2 SV=1//7.4796e-20",217068593,217075171,"+",61193,"upstream"]
["chr5","LNC_004022","XLOC_040790","lncRNA",218067744,218068015,"-","Zm00001d018295_T004","Zm00001d018295","sp|Q5JTH9|RRP12_HUMAN RRP12-like protein OS=Homo sapiens GN=RRP12 PE=1 SV=2//5.12153e-15",218077909,218085851,"+",9893,"upstream"]
["chr5","LNC_004023","XLOC_040801","lncRNA",218463024,218463238,"-","Zm00001d018318_T027","Zm00001d018318","sp|Q9FPR3|EDR1_ARATH Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1//2.6313e-36",218380721,218387261,"+",75762,"downstream"]
["chr5","LNC_004024","XLOC_040847","lncRNA",219997117,219997582,"-","Zm00001d018391_T001","Zm00001d018391","sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2 SV=1//1.1254e-10",219928336,219932445,"-",64671,"upstream"]
["chr5","LNC_004024","XLOC_040847","lncRNA",219997117,219997582,"-","Zm00001d018404_T002","Zm00001d018404","sp|Q9FZP1|HPSE3_ARATH Heparanase-like protein 3 OS=Arabidopsis thaliana GN=At5g34940 PE=2 SV=2//0",220038036,220041769,"+",40453,"upstream"]
["chr5","LNC_004026","XLOC_040859","lncRNA",220325937,220326175,"-","Zm00001d018413_T016","Zm00001d018413","sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana GN=CLPP6 PE=1 SV=1//5.64111e-98",220265139,220277441,"-",48495,"upstream"]
["chr5","LNC_004026","XLOC_040859","lncRNA",220325937,220326175,"-","Zm00001d018413_T003","Zm00001d018413","sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana GN=CLPP6 PE=1 SV=1//5.64111e-98",220253083,220263862,"-",62074,"upstream"]
["chr5","LNC_004027","XLOC_040891","lncRNA",221507561,221507885,"-","Zm00001d018481_T027","Zm00001d018481","sp|Q9LKB9|MYO6_ARATH Myosin-6 OS=Arabidopsis thaliana GN=XI-2 PE=1 SV=1//3.09625e-134",221569614,221583565,"+",61728,"upstream"]
["chr5","LNC_004027","XLOC_040891","lncRNA",221507561,221507885,"-","Zm00001d018477_T007","Zm00001d018477",null,221508015,221514674,"+",129,"upstream"]
["chr5","LNC_004028","XLOC_040923","lncRNA",222539668,222540356,"-","Zm00001d018523_T019","Zm00001d018523","sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A OS=Arabidopsis thaliana GN=RPN5A PE=1 SV=1//5.39249e-24",222464381,222467138,"-",72529,"upstream"]
["chr5","LNC_004029","XLOC_040927","lncRNA",222686708,222687128,"-","Zm00001d018541_T001","Zm00001d018541","sp|Q84MA9|Y1063_ARATH Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 OS=Arabidopsis thaliana GN=At1g60630 PE=2 SV=1//1.4837e-29",222662281,222667193,"+",19514,"downstream"]
["chr8","LNC_005482","XLOC_054913","lncRNA",73352158,73352410,"-","Zm00001d009617_T003","Zm00001d009617","sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1//1.86859e-17",73343617,73351556,"-",601,"upstream"]
["chr8","LNC_005484","XLOC_054932","lncRNA",74589231,74589531,"-","Zm00001d009653_T004","Zm00001d009653","sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3//9.12442e-36",74612646,74614785,"+",23114,"upstream"]
["chr3","LNC_002142","XLOC_021411","lncRNA",24391581,24391904,"+","Zm00001d040040_T001","Zm00001d040040","sp|Q94BT9|ATOX1_ARATH Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=1//8.71365e-08",24347329,24350219,"-",41361,"upstream"]
["chr3","LNC_002149","XLOC_021471","lncRNA",29007660,29007885,"+","Zm00001d040142_T010","Zm00001d040142","sp|Q9C658|DCP5_ARATH Protein decapping 5 OS=Arabidopsis thaliana GN=DCP5 PE=1 SV=1//1.15578e-14",29090143,29096205,"+",82257,"upstream"]
["chr5","LNC_003550","XLOC_035799","lncRNA",96265498,96266557,"+","Zm00001d015533_T001","Zm00001d015533","sp|B8BDK0|ITPK6_ORYSI Inositol-tetrakisphosphate 1-kinase 6 OS=Oryza sativa subsp. indica GN=ITPK6 PE=3 SV=1//1.93072e-14",96259228,96260725,"-",4772,"upstream"]
["chr9","LNC_005731","XLOC_057431","lncRNA",44580592,44580905,"+","Zm00001d045864_T003","Zm00001d045864","sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1//0",44507014,44511928,"-",68663,"upstream"]
["chr9","LNC_005735","XLOC_057467","lncRNA",46871742,46871957,"+","Zm00001d027090_T001","Zm00001d027090",null,46802757,46802970,"-",68771,"upstream"]
["chr4","LNC_003083","XLOC_030643","lncRNA",240095292,240096323,"+","Zm00001d053741_T003","Zm00001d053741",null,240158981,240163531,"-",62657,"downstream"]
["chr4","LNC_003083","XLOC_030643","lncRNA",240095292,240096323,"+","Zm00001d053741_T006","Zm00001d053741",null,240162450,240163901,"-",66126,"downstream"]
["chr4","LNC_003081","XLOC_030625","lncRNA",239646853,239649468,"+","zma-mir171a","zma-MIR171a",null,239713555,239713653,"+",64086,"upstream"]
["chr4","LNC_003087","XLOC_030717","lncRNA",243040272,243040488,"+","Zm00001d053888_T008","Zm00001d053888","sp|Q9C9Z9|ELD1_ARATH Glycosyltransferase-like KOBITO 1 OS=Arabidopsis thaliana GN=ELD1 PE=1 SV=1//6.02641e-11",243030472,243034085,"-",6186,"upstream"]
["chr4","LNC_003087","XLOC_030717","lncRNA",243040272,243040488,"+","Zm00001d053887_T001","Zm00001d053887","sp|A2X0R4|MOC2B_ORYSI Molybdopterin synthase catalytic subunit OS=Oryza sativa subsp. indica GN=MOCS2 PE=3 SV=1//6.10584e-59",242981995,242982564,"-",57707,"upstream"]
["chr4","LNC_003084","XLOC_030666","lncRNA",240815693,240815906,"+","Zm00001d053776_T003","Zm00001d053776","sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=3 SV=1//8.07789e-13",240858680,240872033,"-",42773,"downstream"]
["chr4","LNC_003084","XLOC_030666","lncRNA",240815693,240815906,"+","Zm00001d053776_T020","Zm00001d053776","sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=3 SV=1//8.07789e-13",240868709,240875478,"-",52802,"downstream"]
["chr9","LNC_005863","XLOC_058474","lncRNA",130355125,130355458,"+","Zm00001d047442_T001","Zm00001d047442",null,130336965,130337861,"-",17263,"upstream"]
["chr9","LNC_005862","XLOC_058472","lncRNA",130337758,130338012,"+","Zm00001d047448_T004","Zm00001d047448","sp|Q9LYB4|GPX5_ARATH Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=1 SV=1//2.01334e-20",130415743,130418514,"-",77730,"downstream"]
["chr9","LNC_005867","XLOC_058538","lncRNA",134228091,134228378,"+","Zm00001d047536_T025","Zm00001d047536",null,134140514,134147143,"+",80947,"downstream"]
["chr9","LNC_005867","XLOC_058538","lncRNA",134228091,134228378,"+","Zm00001d047538_T003","Zm00001d047538","sp|P0C1U4|GUN9_ORYSJ Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1//6.8125e-107",134287365,134292209,"+",58986,"upstream"]
["chr2","LNC_001728","XLOC_017005","lncRNA",236315103,236315347,"+","Zm00001d007620_T001","Zm00001d007620","sp|Q84QY3|PLP1_ORYSJ Patatin-like protein 1 OS=Oryza sativa subsp. japonica GN=PLP1 PE=3 SV=1//1.59647e-161",236359638,236361597,"+",44290,"upstream"]
["chr2","LNC_001729","XLOC_017046","lncRNA",237899904,237900209,"+","Zm00001d007712_T001","Zm00001d007712","sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2//2.29434e-33",237946938,237954326,"+",46728,"upstream"]
["chr2","LNC_001729","XLOC_017046","lncRNA",237899904,237900209,"+","Zm00001d007712_T010","Zm00001d007712","sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2//2.29434e-33",237946961,237953888,"+",46751,"upstream"]
["chr2","LNC_001723","XLOC_016897","lncRNA",231528654,231532116,"+","Zm00001d007434_T009","Zm00001d007434","sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1//3.69823e-10",231628715,231635630,"-",96598,"downstream"]
["chr2","LNC_001723","XLOC_016897","lncRNA",231528654,231532116,"+","Zm00001d007424_T002","Zm00001d007424","sp|Q10P01|LCB1A_ORYSJ Long chain base biosynthesis protein 1a OS=Oryza sativa subsp. japonica GN=Os03g0252800 PE=2 SV=1//2.28221e-21",231425089,231429821,"+",98832,"downstream"]
["chr2","LNC_001727","XLOC_016992","lncRNA",235931696,235932060,"+","Zm00001d007595_T021","Zm00001d007595","sp|Q9FN37|PSKR2_ARATH Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1//1.07702e-12",235880843,235887529,"-",44166,"upstream"]
["chr1","LNC_000409","XLOC_004414","lncRNA",294820625,294820876,"+","Zm00001d034504_T001","Zm00001d034504",null,294759367,294760441,"-",60183,"upstream"]
["chr8","LNC_005130","XLOC_051504","lncRNA",19485234,19485608,"+","Zm00001d008769_T002","Zm00001d008769","sp|Q54UF8|SERIC_DICDI Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1//8.81733e-20",19563366,19566648,"-",77757,"downstream"]
["chr1","LNC_000453","XLOC_005046","lncRNA",17711800,17715923,"-","Zm00001d027922_T003","Zm00001d027922","sp|Q94HF1|EIF3K_ORYSJ Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japonica GN=TIF3K1 PE=2 SV=1//2.33018e-44",17722784,17726129,"-",6860,"downstream"]
["chr1","LNC_000457","XLOC_005046","lncRNA",17711800,17715994,"-","Zm00001d027918_T007","Zm00001d027918","sp|Q8H1G6|PTI11_ARATH PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana GN=PTI11 PE=1 SV=1//1.26269e-24",17609599,17613944,"+",97855,"downstream"]
["chr1","LNC_000456","XLOC_005046","lncRNA",17711800,17715994,"-","Zm00001d027920_T006","Zm00001d027920","sp|Q9C717|FLXL3_ARATH Protein FLX-like 3 OS=Arabidopsis thaliana GN=FLXL3 PE=1 SV=1//3.96584e-09",17618140,17621851,"+",89948,"downstream"]
["chr8","LNC_005252","XLOC_052559","lncRNA",104474044,104474431,"+","Zm00001d010216_T001","Zm00001d010216","sp|Q8RWM3|MED27_ARATH Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana GN=MED27 PE=1 SV=1//5.8491e-17",104483932,104490884,"+",9500,"upstream"]
["chr8","LNC_005253","XLOC_052569","lncRNA",105299718,105300066,"+","Zm00001d010235_T024","Zm00001d010235","sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana GN=At3g51120 PE=2 SV=3//8.84401e-09",105395675,105402990,"-",95608,"downstream"]
["chr2","LNC_001935","XLOC_018978","lncRNA",117435140,117435498,"-","Zm00001d004547_T006","Zm00001d004547",null,117337470,117341107,"+",94032,"downstream"]
["chr2","LNC_001936","XLOC_018982","lncRNA",117643163,117643405,"-","Zm00001d004554_T005","Zm00001d004554","sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1//6.77872e-28",117604314,117607473,"-",35689,"upstream"]
["chr2","LNC_001931","XLOC_018915","lncRNA",113643729,113644350,"-","Zm00001d000896_T001","Zm00001d000896",null,113585635,113585850,"-",57878,"upstream"]
["chr2","LNC_001932","XLOC_018935","lncRNA",114682817,114683135,"-","Zm00001d004484_T001","Zm00001d004484","sp|Q0VHD6|TSGD1_ZINOF (+)-germacrene D synthase OS=Zingiber officinale PE=1 SV=1//4.75808e-115",114598156,114600453,"-",82363,"upstream"]
["chr1","LNC_000049","XLOC_000676","lncRNA",32142518,32142784,"+","Zm00001d028361_T001","Zm00001d028361","sp|F4IPE3|IDD15_ARATH Protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana GN=SGR5 PE=1 SV=1//2.91122e-81",32068552,32072460,"-",70057,"upstream"]
["chr1","LNC_000045","XLOC_000640","lncRNA",30028826,30029720,"+","Zm00001d028308_T001","Zm00001d028308",null,29985961,29988114,"+",40711,"downstream"]
["chr1","LNC_000040","XLOC_000604","lncRNA",28298451,28298912,"+","Zm00001d028262_T069","Zm00001d028262","sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155 OS=Arabidopsis thaliana GN=NUP155 PE=1 SV=1//6.5955e-12",28395867,28404414,"+",96954,"upstream"]
["chr1","LNC_000041","XLOC_000620","lncRNA",29186729,29187036,"+","Zm00001d028285_T001","Zm00001d028285","sp|Q84RR2|ARI2_ARATH Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana GN=ARI2 PE=2 SV=1//0",29171324,29180556,"-",6172,"upstream"]
["chr7","LNC_004619","XLOC_046344","lncRNA",9883118,9887165,"+","Zm00001d018937_T002","Zm00001d018937","sp|Q0WVF8|MMS19_ARATH MMS19 nucleotide excision repair protein homolog OS=Arabidopsis thaliana GN=MMS19 PE=1 SV=1//2.14936e-34",9809252,9822901,"+",60216,"downstream"]
["chr7","LNC_004614","XLOC_046305","lncRNA",7750117,7756425,"+","Zm00001d018867_T003","Zm00001d018867","sp|Q8VZU2|SY132_ARATH Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1//5.88186e-103",7839802,7844665,"-",83376,"downstream"]
["chr7","LNC_004612","XLOC_046305","lncRNA",7749648,7756425,"+","Zm00001d018869_T001","Zm00001d018869","sp|O23888|ALDO2_MAIZE Indole-3-acetaldehyde oxidase OS=Zea mays GN=AO2 PE=2 SV=1//0",7849925,7861720,"-",93499,"downstream"]
["chr2","LNC_001556","XLOC_015092","lncRNA",111563221,111563455,"+","Zm00001d004431_T001","Zm00001d004431","sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial OS=Arabidopsis thaliana GN=STR1 PE=1 SV=1//2.61745e-36",111471969,111473513,"+",89707,"downstream"]
["chrMt","LNC_006274","XLOC_062241","lncRNA",290876,293028,"-","GRMZM5G837015_T01","GRMZM5G837015",null,199269,199586,"+",91289,"downstream"]
["chrMt","LNC_006273","XLOC_062224","lncRNA",197868,198981,"-","GRMZM5G871174_T01","GRMZM5G871174",null,105917,106267,"+",91600,"downstream"]
["chrMt","LNC_006273","XLOC_062224","lncRNA",197868,198981,"-","GRMZM5G800457_T01","GRMZM5G800457",null,98038,98789,"-",99078,"upstream"]
["chr2","LNC_001559","XLOC_015094","lncRNA",111689801,111698883,"+","Zm00001d000893_T001","Zm00001d000893",null,111649203,111650340,"-",39460,"upstream"]
["chr3","LNC_002356","XLOC_023306","lncRNA",187349593,187352024,"+","Zm00001d043044_T001","Zm00001d043044",null,187254868,187256184,"+",93408,"downstream"]
["chr3","LNC_002351","XLOC_023254","lncRNA",184961028,184962860,"+","Zm00001d042962_T005","Zm00001d042962","sp|Q3UYK3|TBCD9_MOUSE TBC1 domain family member 9 OS=Mus musculus GN=Tbc1d9 PE=2 SV=2//2.35915e-38",184999227,185011547,"+",36366,"upstream"]
["chr4","LNC_003348","XLOC_033409","lncRNA",202011031,202011506,"-","Zm00001d052827_T001","Zm00001d052827","sp|D9J0Z7|AAMT1_MAIZE Anthranilate O-methyltransferase 1 OS=Zea mays GN=AAMT1 PE=1 SV=1//1.21018e-100",202042493,202044024,"+",30986,"upstream"]
["chr4","LNC_003344","XLOC_033362","lncRNA",199125768,199127464,"-","Zm00001d052726_T014","Zm00001d052726","sp|Q8GU82|AB45G_ORYSJ ABC transporter G family member 45 OS=Oryza sativa subsp. japonica GN=ABCG45 PE=2 SV=2//7.067e-21",199113884,199127980,"+",-1697,"antisense"]
["chr4","LNC_003344","XLOC_033362","lncRNA",199125768,199127464,"-","Zm00001d052726_T002","Zm00001d052726","sp|Q8GU82|AB45G_ORYSJ ABC transporter G family member 45 OS=Oryza sativa subsp. japonica GN=ABCG45 PE=2 SV=2//7.067e-21",199113884,199115301,"+",10466,"downstream"]
["chr4","LNC_003346","XLOC_033382","lncRNA",200086239,200087164,"-","Zm00001d052763_T002","Zm00001d052763","sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1//3.14494e-10",199989647,199997578,"-",88660,"upstream"]
["chr4","LNC_003347","XLOC_033401","lncRNA",201462592,201462835,"-","Zm00001d052803_T007","Zm00001d052803","sp|Q9FMG4|SC35_ARATH Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana GN=SC35 PE=1 SV=1//5.30382e-56",201411404,201419287,"-",43304,"upstream"]
["chr4","LNC_003342","XLOC_033360","lncRNA",198960357,198960631,"-","Zm00001d026977_T001","Zm00001d026977",null,198883586,198884020,"+",76336,"downstream"]
["chr4","LNC_003343","XLOC_033361","lncRNA",199124111,199124668,"-","Zm00001d052726_T027","Zm00001d052726","sp|Q8GU82|AB45G_ORYSJ ABC transporter G family member 45 OS=Oryza sativa subsp. japonica GN=ABCG45 PE=2 SV=2//7.067e-21",199120957,199127708,"+",-558,"antisense"]
["chr3","LNC_002765","XLOC_027509","lncRNA",234510036,234510685,"-","Zm00001d044672_T010","Zm00001d044672","sp|Q8L4P8|CKB11_ORYSJ Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1//2.47608e-25",234547698,234549458,"+",37012,"upstream"]
["chr3","LNC_002765","XLOC_027509","lncRNA",234510036,234510685,"-","Zm00001d044672_T002","Zm00001d044672","sp|Q8L4P8|CKB11_ORYSJ Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1//2.47608e-25",234545939,234549458,"+",35253,"upstream"]
["chr4","LNC_002766","XLOC_027534","lncRNA",249638,249970,"+","Zm00001d048585_T002","Zm00001d048585","sp|Q8VWZ8|SMO22_ARATH Methylsterol monooxygenase 2-2 OS=Arabidopsis thaliana GN=SMO2-2 PE=2 SV=1//8.02185e-143",298060,301454,"+",48089,"upstream"]
["chr3","LNC_002761","XLOC_027458","lncRNA",231786739,231787161,"-","Zm00001d044559_T002","Zm00001d044559","sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis thaliana GN=ULP1B PE=5 SV=2//4.17992e-06",231694625,231698084,"-",88654,"upstream"]
["chr3","LNC_002760","XLOC_027457","lncRNA",231781518,231781813,"-","Zm00001d044566_T024","Zm00001d044566","sp|Q9SHJ3|CALS7_ARATH Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=3 SV=3//1.67493e-143",231823953,231877413,"+",42139,"upstream"]
["chr3","LNC_002760","XLOC_027457","lncRNA",231781518,231781813,"-","Zm00001d044555_T003","Zm00001d044555","sp|Q5XEZ5|CSC1_ARATH Calcium permeable stress-gated cation channel 1 OS=Arabidopsis thaliana GN=CSC1 PE=2 SV=1//2.12484e-131",231673936,231685374,"+",96143,"downstream"]
["chr10","LNC_001236","XLOC_012235","lncRNA",88560787,88561440,"-","Zm00001d024796_T004","Zm00001d024796","sp|Q9MAA2|AT74_ARATH Phosphoglycerate mutase-like protein AT74 OS=Arabidopsis thaliana GN=At3g05170 PE=2 SV=1//1.09339e-108",88564986,88570684,"+",3545,"upstream"]
["chr10","LNC_001235","XLOC_012229","lncRNA",88315139,88315372,"-","Zm00001d024788_T001","Zm00001d024788",null,88367424,88377661,"-",52051,"downstream"]
["chr5","LNC_003989","XLOC_040586","lncRNA",210041151,210043234,"-","Zm00001d017913_T004","Zm00001d017913","sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1//0",210045106,210049644,"-",1871,"downstream"]
["chr5","LNC_003986","XLOC_040578","lncRNA",209827242,209827753,"-","Zm00001d017902_T001","Zm00001d017902","sp|Q9LRZ3|PUM24_ARATH Pumilio homolog 24 OS=Arabidopsis thaliana GN=APUM24 PE=2 SV=1//7.45894e-12",209822875,209823935,"-",3306,"upstream"]
["chr5","LNC_003984","XLOC_040568","lncRNA",209602536,209602816,"-","Zm00001d017890_T001","Zm00001d017890","sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1//4.29998e-49",209654501,209671042,"-",51684,"downstream"]
["chr5","LNC_003985","XLOC_040569","lncRNA",209644444,209644681,"-","Zm00001d017885_T001","Zm00001d017885","sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1//2.74169e-09",209614260,209620254,"+",24189,"downstream"]
["chr5","LNC_003985","XLOC_040569","lncRNA",209644444,209644681,"-","Zm00001d017885_T006","Zm00001d017885","sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1//2.74169e-09",209615521,209620188,"+",24255,"downstream"]
["chr3","LNC_002163","XLOC_021578","lncRNA",36660778,36661069,"+","Zm00001d040301_T002","Zm00001d040301","sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1//1.35298e-13",36557968,36563026,"-",97751,"upstream"]
["chr3","LNC_002162","XLOC_021576","lncRNA",36655227,36655748,"+","Zm00001d040301_T006","Zm00001d040301","sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1//1.35298e-13",36558050,36563190,"-",92036,"upstream"]
["chr5","LNC_003572","XLOC_035956","lncRNA",114212680,114216426,"+","Zm00001d015730_T001","Zm00001d015730",null,114127797,114128849,"-",83830,"upstream"]
["chr5","LNC_003571","XLOC_035955","lncRNA",114121779,114122004,"+","Zm00001d015729_T001","Zm00001d015729","sp|Q9LY75|CYP63_ARATH Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana GN=CYP63 PE=1 SV=1//5.35618e-21",114029491,114040346,"+",81432,"downstream"]
["chr10","LNC_000982","XLOC_009996","lncRNA",80382555,80382892,"+","Zm00001d024612_T054","Zm00001d024612","sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1 SV=1//7.22956e-26",80320858,80327406,"+",55148,"downstream"]
["chr10","LNC_000982","XLOC_009996","lncRNA",80382555,80382892,"+","Zm00001d024612_T015","Zm00001d024612","sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1 SV=1//7.22956e-26",80320725,80327244,"+",55310,"downstream"]
["chr10","LNC_000981","XLOC_009972","lncRNA",78458425,78460687,"+","Zm00001d024567_T006","Zm00001d024567","sp|F4HQA1|PAF1_ARATH Protein PAF1 homolog OS=Arabidopsis thaliana GN=VIP2 PE=1 SV=1//6.70552e-114",78539229,78549047,"+",78541,"upstream"]
["chr9","LNC_005750","XLOC_057581","lncRNA",61090668,61094187,"+","Zm00001d046068_T008","Zm00001d046068","sp|Q9FF46|AB28G_ARATH ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1//6.01826e-80",61129177,61133944,"+",34989,"upstream"]
["chr3","LNC_002294","XLOC_022717","lncRNA",152663250,152663787,"+","Zm00001d042133_T003","Zm00001d042133","sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus GN=Hnrnpab PE=1 SV=1//2.38286e-08",152709850,152715263,"+",46062,"upstream"]
["chr3","LNC_002296","XLOC_022736","lncRNA",153866868,153867080,"+","Zm00001d042152_T001","Zm00001d042152","sp|Q8S0G4|GPDH1_ORYSJ Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic OS=Oryza sativa subsp. japonica GN=Os01g0939600 PE=2 SV=1//8.40688e-42",153901323,153905920,"-",34242,"downstream"]
["chr3","LNC_002290","XLOC_022654","lncRNA",146828845,146829179,"+","Zm00001d041994_T002","Zm00001d041994","sp|Q5HZV9|PP1R7_RAT Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus GN=Ppp1r7 PE=1 SV=1//1.75986e-06",146858511,146861740,"+",29331,"upstream"]
["chr6","LNC_004409","XLOC_044213","lncRNA",58215033,58215370,"-","Zm00001d035881_T001","Zm00001d035881","sp|A2AIL4|NDUF6_MOUSE NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus GN=Ndufaf6 PE=3 SV=1//1.97925e-34",58307418,58308332,"+",92047,"upstream"]
["chr9","LNC_005808","XLOC_057949","lncRNA",96848244,96848661,"+","Zm00001d046579_T020","Zm00001d046579","sp|Q67W65|TAF1_ORYSJ Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica GN=TAF1 PE=2 SV=1//3.33553e-76",96780150,96808634,"+",39609,"downstream"]
["chr9","LNC_006138","XLOC_060984","lncRNA",139461292,139461530,"-","Zm00001d047698_T001","Zm00001d047698","sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1//3.67127e-163",139494480,139495729,"-",32949,"downstream"]
["chr9","LNC_006138","XLOC_060984","lncRNA",139461292,139461530,"-","Zm00001d047689_T001","Zm00001d047689","sp|Q2YDC9|PDCD2_BOVIN Programmed cell death protein 2 OS=Bos taurus GN=PDCD2 PE=2 SV=1//1.04375e-59",139363842,139370229,"+",91062,"downstream"]
["chr9","LNC_006136","XLOC_060919","lncRNA",136675281,136675547,"-","Zm00001d047601_T008","Zm00001d047601","sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1//4.01483e-20",136758477,136763034,"-",82929,"downstream"]
["chr9","LNC_006136","XLOC_060919","lncRNA",136675281,136675547,"-","Zm00001d047592_T008","Zm00001d047592","sp|O74378|ODO1_SCHPO 2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=kgd1 PE=3 SV=1//5.75266e-42",136572598,136577021,"-",98259,"upstream"]
["chr9","LNC_006130","XLOC_060880","lncRNA",133797517,133797746,"-","Zm00001d047527_T007","Zm00001d047527","sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=2 SV=1//0",133875513,133882641,"-",77766,"downstream"]
["chr8","LNC_005351","XLOC_053981","lncRNA",179508418,179509027,"+","Zm00001d012739_T001","Zm00001d012739",null,179536120,179536192,"-",27092,"downstream"]
["chr1","LNC_000270","XLOC_002769","lncRNA",201483933,201484171,"+","Zm00001d031773_T001","Zm00001d031773","sp|Q07764|HVA22_HORVU Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1//7.34474e-47",201397643,201398822,"-",85110,"upstream"]
["chr8","LNC_005352","XLOC_053991","lncRNA",179678541,179678878,"+","Zm00001d012748_T001","Zm00001d012748","sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1//0",179664693,179669771,"+",8769,"downstream"]
["chr8","LNC_005352","XLOC_053991","lncRNA",179678541,179678878,"+","Zm00001d012747_T007","Zm00001d012747","sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1//4.70965e-10",179644446,179650153,"-",28387,"upstream"]
["chr8","LNC_005113","XLOC_051269","lncRNA",6143319,6145298,"+","Zm00001d008352_T001","Zm00001d008352",null,6138573,6139305,"+",4013,"downstream"]
["chr8","LNC_005113","XLOC_051269","lncRNA",6143319,6145298,"+","Zm00001d008357_T008","Zm00001d008357","sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2//0",6174626,6176229,"-",29327,"downstream"]
["chr8","LNC_005111","XLOC_051267","lncRNA",6141156,6143013,"+","Zm00001d008356_T001","Zm00001d008356","sp|Q0JP11|C3H3_ORYSJ Zinc finger CCCH domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=Os01g0252200 PE=2 SV=2//1.28693e-32",6168205,6172159,"-",25191,"downstream"]
["chr1","LNC_000474","XLOC_005237","lncRNA",29489793,29490080,"-","Zm00001d028295_T003","Zm00001d028295","sp|Q8H0W0|LPA3_ARATH Protein LOW PSII ACCUMULATION 3, chloroplastic OS=Arabidopsis thaliana GN=LPA3 PE=1 SV=1//2.68144e-25",29497242,29504032,"+",7161,"upstream"]
["chr1","LNC_000478","XLOC_005278","lncRNA",31365062,31512637,"-","Zm00001d028340_T001","Zm00001d028340",null,31306395,31307591,"-",57470,"upstream"]
["chr8","LNC_005239","XLOC_052373","lncRNA",92941289,92941650,"+","Zm00001d009971_T001","Zm00001d009971","sp|Q94CK9|LRP1_ARATH Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1//2.36426e-38",93018884,93020443,"+",77233,"upstream"]
["chr8","LNC_005234","XLOC_052367","lncRNA",92541780,92542433,"+","Zm00001d009962_T002","Zm00001d009962",null,92539196,92543525,"-",-654,"antisense"]
["chr4","LNC_002936","XLOC_028989","lncRNA",127543197,127544124,"+","Zm00001d050867_T001","Zm00001d050867","sp|Q8GUM4|Y3739_ARATH Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=2//8.78784e-74",127547150,127548914,"-",3025,"downstream"]
["chr4","LNC_002937","XLOC_028990","lncRNA",127544306,127544668,"+","Zm00001d050868_T003","Zm00001d050868","sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2//1.09829e-52",127596451,127602837,"-",51782,"downstream"]
["chr1","LNC_000066","XLOC_000901","lncRNA",44724949,44725217,"+","Zm00001d028737_T001","Zm00001d028737","sp|Q6NMK1|GXM1_ARATH Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana GN=GXM1 PE=1 SV=1//3.40913e-33",44733389,44733898,"-",8171,"downstream"]
["chr6","LNC_004189","XLOC_042308","lncRNA",111079345,111080226,"+","Zm00001d037059_T025","Zm00001d037059","sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1//0",110973702,110982850,"+",96494,"downstream"]
["chr6","LNC_004184","XLOC_042253","lncRNA",108156231,108156594,"+","Zm00001d036981_T009","Zm00001d036981","sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2//3.61269e-08",108204290,108211829,"+",47695,"upstream"]
["chr6","LNC_004182","XLOC_042236","lncRNA",107109902,107110190,"+","Zm00001d036949_T001","Zm00001d036949","sp|Q0DBD3|PP2A1_ORYSJ Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A1 PE=2 SV=1//0",107113060,107129363,"+",2869,"upstream"]
["chr2","LNC_001912","XLOC_018766","lncRNA",98038380,98038624,"-","Zm00001d004263_T001","Zm00001d004263",null,98026436,98026509,"+",11870,"downstream"]
["chr3","LNC_002337","XLOC_023093","lncRNA",177288264,177289417,"+","Zm00001d042692_T003","Zm00001d042692","sp|Q9LUH2|ALF5_ARATH MATE efflux family protein ALF5 OS=Arabidopsis thaliana GN=ALF5 PE=2 SV=1//8.4622e-14",177204041,177208753,"-",79510,"upstream"]
["chr3","LNC_002334","XLOC_023073","lncRNA",176193371,176193625,"+","Zm00001d042670_T041","Zm00001d042670","sp|Q3B7T1|EDRF1_HUMAN Erythroid differentiation-related factor 1 OS=Homo sapiens GN=EDRF1 PE=1 SV=1//6.46021e-36",176203196,176205341,"+",9570,"upstream"]
["chr3","LNC_002330","XLOC_022991","lncRNA",170885211,170885489,"+","Zm00001d042528_T002","Zm00001d042528","sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp. japonica GN=FSM PE=2 SV=1//6.27701e-114",170873036,170879316,"-",5894,"upstream"]
["chr3","LNC_002331","XLOC_022997","lncRNA",171510408,171510850,"+","Zm00001d042549_T003","Zm00001d042549","sp|Q9FJX5|BT4_ARATH BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana GN=BT4 PE=1 SV=1//4.26794e-19",171514249,171518312,"-",3398,"downstream"]
["chr4","LNC_003323","XLOC_033049","lncRNA",182571657,182572179,"-","Zm00001d052189_T001","Zm00001d052189","sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31 PE=1 SV=2//1.00898e-31",182663650,182664897,"-",91470,"downstream"]
["chr4","LNC_003320","XLOC_033028","lncRNA",181160725,181161132,"-","Zm00001d052149_T047","Zm00001d052149","sp|Q12311|NTO1_YEAST NuA3 HAT complex component NTO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NTO1 PE=1 SV=1//1.46238e-16",181209132,181231062,"-",47999,"downstream"]
["chr1","LNC_000668","XLOC_007020","lncRNA",183204466,183227360,"-","Zm00001d031241_T001","Zm00001d031241","sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=aars-2 PE=2 SV=1//2.35333e-14",183287978,183295572,"+",60617,"upstream"]
["chr1","LNC_000668","XLOC_007020","lncRNA",183204466,183227360,"-","Zm00001d031236_T007","Zm00001d031236","sp|Q14CH7|SYAM_MOUSE Alanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Aars2 PE=2 SV=1//9.10877e-13",183190746,183191772,"+",12693,"downstream"]
["chr1","LNC_000666","XLOC_007020","lncRNA",183204466,183205114,"-","Zm00001d031239_T003","Zm00001d031239","sp|Q54Y20|SYAC_DICDI Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=alaS PE=2 SV=1//7.33803e-48",183229237,183244599,"-",24122,"downstream"]
["chr1","LNC_000667","XLOC_007020","lncRNA",183204466,183227327,"-","Zm00001d031241_T003","Zm00001d031241","sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=aars-2 PE=2 SV=1//2.35333e-14",183287978,183295572,"+",60650,"upstream"]
["chr1","LNC_000665","XLOC_007013","lncRNA",182779605,182779955,"-","Zm00001d031231_T056","Zm00001d031231","sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2//3.67663e-115",182821674,182827487,"-",41718,"downstream"]
["chr1","LNC_000665","XLOC_007013","lncRNA",182779605,182779955,"-","Zm00001d031231_T027","Zm00001d031231","sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2//3.67663e-115",182820674,182827484,"-",40718,"downstream"]
["chr3","LNC_002747","XLOC_027326","lncRNA",225401705,225403239,"-","Zm00001d044338_T018","Zm00001d044338","sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2//9.8325e-17",225447703,225451930,"+",44463,"upstream"]
["chr3","LNC_002746","XLOC_027300","lncRNA",224131081,224131508,"-","Zm00001d044283_T001","Zm00001d044283","sp|F4J7T2|EAF1B_ARATH Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana GN=EAF1B PE=1 SV=1//1.62156e-35",224136109,224157138,"+",4600,"upstream"]
["chr3","LNC_002745","XLOC_027290","lncRNA",223558410,223558864,"-","Zm00001d044271_T010","Zm00001d044271","sp|Q0JLS6|RHD3_ORYSJ Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica GN=RHD3 PE=2 SV=1//0",223462024,223469120,"+",89289,"downstream"]
["chr3","LNC_002742","XLOC_027273","lncRNA",222882197,222882468,"-","Zm00001d044243_T001","Zm00001d044243","sp|Q8CDF7|EXD1_MOUSE Exonuclease 3&apos;-5&apos; domain-containing protein 1 OS=Mus musculus GN=Exd1 PE=2 SV=1//1.94854e-12",222856356,222862935,"-",19261,"upstream"]
["chr3","LNC_002741","XLOC_027253","lncRNA",221737886,221738304,"-","Zm00001d044197_T002","Zm00001d044197","sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1//5.05366e-36",221729747,221732190,"+",5695,"downstream"]
["chr3","LNC_002748","XLOC_027328","lncRNA",225415744,225416016,"-","Zm00001d044329_T002","Zm00001d044329","sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum GN=DDB_G0268948 PE=1 SV=2//1.49885e-11",225334357,225336240,"+",79503,"downstream"]
["chr3","LNC_002748","XLOC_027328","lncRNA",225415744,225416016,"-","Zm00001d000718_T001","Zm00001d000718",null,225463716,225464518,"+",47699,"upstream"]
["chr7","LNC_004965","XLOC_049703","lncRNA",100666841,100667086,"-","Zm00001d020219_T002","Zm00001d020219","sp|P46274|VDAC1_WHEAT Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1//9.38283e-32",100656072,100660065,"+",6775,"downstream"]
["chr7","LNC_004965","XLOC_049703","lncRNA",100666841,100667086,"-","Zm00001d020220_T001","Zm00001d020220","sp|Q9M9V6|ICS2_ARATH Isochorismate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=ICS2 PE=2 SV=2//1.28154e-12",100663432,100666790,"+",50,"downstream"]
["chr10","LNC_001214","XLOC_012036","lncRNA",71826910,71827112,"-","Zm00001d024460_T001","Zm00001d024460",null,71764322,71764927,"-",61982,"upstream"]
["chr10","LNC_001219","XLOC_012089","lncRNA",75986955,75987238,"-","Zm00001d024523_T025","Zm00001d024523","sp|Q0WV90|TPR1_ARATH Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3//1.97187e-155",75993921,75997025,"-",6682,"downstream"]
["chr10","LNC_001219","XLOC_012089","lncRNA",75986955,75987238,"-","Zm00001d024523_T056","Zm00001d024523","sp|Q0WV90|TPR1_ARATH Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3//1.97187e-155",75994118,76002912,"-",6879,"downstream"]
["chr3","LNC_002108","XLOC_021000","lncRNA",2654332,2654638,"+","Zm00001d039365_T001","Zm00001d039365","sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana GN=SEC13B PE=1 SV=1//2.03017e-175",2632877,2633794,"-",20537,"upstream"]
["chr3","LNC_002105","XLOC_020975","lncRNA",1558578,1558782,"+","Zm00001d039312_T002","Zm00001d039312","sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1//0",1461991,1466320,"-",92257,"upstream"]
["chr3","LNC_002107","XLOC_020996","lncRNA",2473835,2474293,"+","Zm00001d039358_T003","Zm00001d039358",null,2498260,2505484,"+",23966,"upstream"]
["chr2","LNC_002101","XLOC_020893","lncRNA",242757569,242757792,"-","Zm00001d007920_T001","Zm00001d007920",null,242692827,242697513,"+",60055,"downstream"]
["chr3","LNC_002103","XLOC_020958","lncRNA",985232,997132,"+","Zm00001d039274_T002","Zm00001d039274","sp|Q7XXL2|4CLL9_ORYSJ 4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2//0",903522,916528,"+",68703,"downstream"]
["chr3","LNC_002103","XLOC_020958","lncRNA",985232,997132,"+","Zm00001d039283_T003","Zm00001d039283","sp|Q0JPA6|SRS1_ORYSJ Salt stress root protein RS1 OS=Oryza sativa subsp. japonica GN=Os01g0233000 PE=2 SV=1//1.42229e-09",999962,1002173,"+",2829,"upstream"]
["chr5","LNC_003519","XLOC_035378","lncRNA",65122308,65122782,"+","Zm00001d014844_T027","Zm00001d014844","sp|Q01401|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2//0",65193118,65196672,"-",70335,"downstream"]
["chr5","LNC_003517","XLOC_035359","lncRNA",63975779,63995736,"+","Zm00001d014809_T004","Zm00001d014809",null,63891555,63896271,"-",79507,"upstream"]
["chr5","LNC_003517","XLOC_035359","lncRNA",63975779,63995736,"+","Zm00001d014812_T002","Zm00001d014812","sp|Q84TH4|SR45A_ARATH Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana GN=SR45A PE=1 SV=1//7.95444e-23",63969221,63973384,"+",2394,"downstream"]
["chr9","LNC_005774","XLOC_057722","lncRNA",77475671,77476057,"+","Zm00001d046274_T003","Zm00001d046274",null,77374057,77377528,"-",98142,"upstream"]
["chr8","LNC_005571","XLOC_055630","lncRNA",130480229,130488370,"-","Zm00001d010855_T002","Zm00001d010855","sp|A2Y0H2|Y5513_ORYSI REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=3 SV=1//1.20765e-102",130579939,130581965,"+",91568,"upstream"]
["chr8","LNC_005574","XLOC_055630","lncRNA",130480229,130488427,"-","Zm00001d010854_T003","Zm00001d010854",null,130511518,130512313,"+",23090,"upstream"]
["chr8","LNC_005574","XLOC_055630","lncRNA",130480229,130488427,"-","Zm00001d010852_T003","Zm00001d010852","sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1//0",130475523,130479784,"+",444,"downstream"]
["chr8","LNC_005576","XLOC_055630","lncRNA",130480229,130488440,"-","Zm00001d010856_T001","Zm00001d010856",null,130582741,130583307,"-",94300,"downstream"]
["chr7","LNC_004796","XLOC_047927","lncRNA",147959682,147959939,"+","Zm00001d021287_T022","Zm00001d021287","sp|Q9LE59|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1//0",147960703,147963603,"-",763,"downstream"]
["chr2","LNC_001453","XLOC_014523","lncRNA",48910825,48914688,"+","Zm00001d003581_T001","Zm00001d003581","sp|Q42602|C89A2_ARATH Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2//8.00769e-99",48886178,48887584,"-",23240,"upstream"]
["chr2","LNC_001457","XLOC_014563","lncRNA",52448383,52448820,"+","Zm00001d003655_T024","Zm00001d003655","sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1//1.65774e-53",52481348,52537740,"+",32527,"upstream"]
["chr9","LNC_005827","XLOC_058186","lncRNA",113546172,113546447,"+","Zm00001d046970_T007","Zm00001d046970","sp|O23277|PRD1_ARATH Protein PRD1 OS=Arabidopsis thaliana GN=PRD1 PE=1 SV=3//4.32715e-69",113511508,113517590,"-",28581,"upstream"]
["chr6","LNC_004428","XLOC_044408","lncRNA",77181121,77181806,"-","Zm00001d036206_T003","Zm00001d036206","sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1//0",77076826,77086653,"-",94467,"upstream"]
["chr9","LNC_005821","XLOC_058107","lncRNA",108283969,108284209,"+","Zm00001d046841_T001","Zm00001d046841",null,108248488,108250611,"-",33357,"upstream"]
["chr9","LNC_006156","XLOC_061253","lncRNA",150958097,150958317,"-","Zm00001d048152_T002","Zm00001d048152","sp|Q0H904|XYNC_ASPFU Endo-1,4-beta-xylanase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xlnC PE=2 SV=2//1.34914e-18",150994557,150997579,"-",36239,"downstream"]
["chr9","LNC_006156","XLOC_061253","lncRNA",150958097,150958317,"-","Zm00001d048150_T013","Zm00001d048150","sp|Q43295|APK1_ARATH Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=APK1 PE=1 SV=1//6.59553e-11",150973426,150979963,"+",15108,"upstream"]
["chr9","LNC_006154","XLOC_061216","lncRNA",149837318,149837699,"-","Zm00001d048085_T003","Zm00001d048085","sp|B4FAF3|NNJA1_MAIZE Ninja-family protein 1 OS=Zea mays PE=2 SV=1//0",149822018,149824822,"+",12495,"downstream"]
["chr9","LNC_006155","XLOC_061235","lncRNA",150360924,150361708,"-","Zm00001d048115_T007","Zm00001d048115",null,150393793,150408107,"+",32084,"upstream"]
["chr9","LNC_006152","XLOC_061200","lncRNA",149177417,149177684,"-","Zm00001d048059_T013","Zm00001d048059","sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1//2.11216e-30",149085925,149093076,"+",84340,"downstream"]
["chr9","LNC_006153","XLOC_061211","lncRNA",149443402,149443806,"-","Zm00001d048074_T001","Zm00001d048074","sp|Q84TI3|OBE4_ARATH Protein OBERON 4 OS=Arabidopsis thaliana GN=OBE4 PE=1 SV=2//2.40343e-113",149392146,149398655,"-",44746,"upstream"]
["chr9","LNC_006158","XLOC_061317","lncRNA",153413954,153414264,"-","Zm00001d048258_T022","Zm00001d048258","sp|Q94A27|SAC2_ARATH Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana GN=SAC2 PE=2 SV=1//3.02224e-23",153366573,153375984,"-",37969,"upstream"]
["chr9","LNC_006159","XLOC_061320","lncRNA",153504740,153505063,"-","Zm00001d048267_T006","Zm00001d048267","sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1//1.81541e-17",153483040,153483969,"+",20770,"downstream"]
["chr1","LNC_000414","XLOC_004520","lncRNA",300280108,300281352,"+","Zm00001d034705_T001","Zm00001d034705",null,300345623,300345976,"+",64270,"upstream"]
["chr1","LNC_000416","XLOC_004532","lncRNA",300745557,300746528,"+","Zm00001d034723_T001","Zm00001d034723","sp|Q10B67|MAN4_ORYSJ Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa subsp. japonica GN=MAN4 PE=2 SV=2//0",300779318,300781313,"-",32789,"downstream"]
["chr1","LNC_000413","XLOC_004509","lncRNA",299466661,299467005,"+","Zm00001d034673_T001","Zm00001d034673","sp|P81713|IBB3_WHEAT Bowman-Birk type trypsin inhibitor OS=Triticum aestivum PE=1 SV=1//1.89163e-15",299503736,299505295,"-",36730,"downstream"]
["chr1","LNC_000412","XLOC_004485","lncRNA",298239812,298240049,"+","Zm00001d034624_T052","Zm00001d034624","sp|Q55GD2|Y8328_DICDI Protein DDB_G0268328 OS=Dictyostelium discoideum GN=DDB_G0268328 PE=4 SV=1//6.29524e-06",298235114,298238889,"-",922,"upstream"]
["chr3","LNC_002485","XLOC_024772","lncRNA",25278483,25278788,"-","Zm00001d040056_T005","Zm00001d040056",null,25353208,25358267,"+",74419,"upstream"]
["chr7","LNC_004889","XLOC_049088","lncRNA",28454248,28454487,"-","Zm00001d019335_T017","Zm00001d019335","sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3//4.42021e-09",28400904,28407705,"-",46542,"upstream"]
["chr7","LNC_004885","XLOC_049058","lncRNA",25866933,25867143,"-","Zm00001d019287_T001","Zm00001d019287","sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana GN=SEC13B PE=1 SV=1//4.48131e-135",25820866,25824162,"-",42770,"upstream"]
["chr5","LNC_003685","XLOC_037163","lncRNA",205551475,205551683,"+","Zm00001d017729_T034","Zm00001d017729","sp|Q6Z8C8|CDKF4_ORYSJ Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1//0",205460422,205466750,"+",84724,"downstream"]
["chr5","LNC_003685","XLOC_037163","lncRNA",205551475,205551683,"+","Zm00001d017736_T001","Zm00001d017736","sp|Q1ZYQ8|EXB10_MAIZE Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2//9.09087e-110",205576400,205576981,"-",24716,"downstream"]
["chr5","LNC_003684","XLOC_037158","lncRNA",205287168,205294031,"+","Zm00001d017721_T002","Zm00001d017721","sp|P59278|Y1745_ARATH Uncharacterized protein At1g51745 OS=Arabidopsis thaliana GN=At1g51745 PE=2 SV=2//1.99386e-07",205190191,205198339,"-",88828,"upstream"]
["chr5","LNC_003686","XLOC_037200","lncRNA",207310939,207365062,"+","Zm00001d017808_T011","Zm00001d017808","sp|Q55681|RECG_SYNY3 ATP-dependent DNA helicase RecG OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=recG PE=3 SV=1//1.72197e-94",207412366,207425474,"+",47303,"upstream"]
["chr5","LNC_003681","XLOC_037158","lncRNA",205287167,205294031,"+","Zm00001d017720_T047","Zm00001d017720","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//0",205182678,205188766,"-",98400,"upstream"]
["chr5","LNC_003683","XLOC_037158","lncRNA",205287168,205294031,"+","Zm00001d017720_T056","Zm00001d017720","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//0",205182678,205188786,"-",98381,"upstream"]
["chr5","LNC_003682","XLOC_037158","lncRNA",205287168,205288547,"+","Zm00001d017721_T002","Zm00001d017721","sp|P59278|Y1745_ARATH Uncharacterized protein At1g51745 OS=Arabidopsis thaliana GN=At1g51745 PE=2 SV=2//1.99386e-07",205190191,205198339,"-",88828,"upstream"]
["chr8","LNC_005213","XLOC_052197","lncRNA",77957297,77957586,"+","Zm00001d009722_T001","Zm00001d009722",null,77901266,77901338,"-",55958,"upstream"]
["chr8","LNC_005215","XLOC_052216","lncRNA",78682218,78686300,"+","Zm00001d009735_T003","Zm00001d009735","sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1//0",78597786,78599600,"+",82617,"downstream"]
["chr8","LNC_005218","XLOC_052228","lncRNA",79991437,79991732,"+","Zm00001d009761_T006","Zm00001d009761","sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=Os01g0549700 PE=2 SV=2//3.04647e-41",80078127,80082890,"+",86394,"upstream"]
["chr7","LNC_004836","XLOC_048389","lncRNA",170657510,170657764,"+","Zm00001d022109_T003","Zm00001d022109","sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1//2.71316e-27",170559870,170564071,"-",93438,"upstream"]
["chr7","LNC_004835","XLOC_048349","lncRNA",168435542,168435761,"+","Zm00001d022042_T002","Zm00001d022042","sp|P80639|IF5A_MAIZE Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2//7.25783e-113",168491796,168494708,"-",56034,"downstream"]
["chr7","LNC_004835","XLOC_048349","lncRNA",168435542,168435761,"+","Zm00001d022041_T005","Zm00001d022041","sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1//8.31275e-176",168429161,168434437,"-",1104,"upstream"]
["chr6","LNC_004418","XLOC_044310","lncRNA",69094015,69098532,"-","Zm00001d036054_T007","Zm00001d036054","sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1//9.4418e-09",69178077,69181638,"-",79544,"downstream"]
["chr7","LNC_004831","XLOC_048339","lncRNA",167824098,167825764,"+","Zm00001d022000_T014","Zm00001d022000","sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3//1.92262e-13",167788957,167792897,"+",31200,"downstream"]
["chr7","LNC_004830","XLOC_048339","lncRNA",167824083,167825764,"+","Zm00001d022000_T009","Zm00001d022000","sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3//1.92262e-13",167788923,167794034,"+",30048,"downstream"]
["chr7","LNC_004830","XLOC_048339","lncRNA",167824083,167825764,"+","Zm00001d022000_T028","Zm00001d022000","sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3//1.92262e-13",167788984,167794043,"+",30039,"downstream"]
["chr6","LNC_004228","XLOC_042582","lncRNA",127712715,127713028,"+","Zm00001d037507_T013","Zm00001d037507","sp|B8BBZ7|GATP3_ORYSI Probable gamma-aminobutyrate transaminase 3, mitochondrial OS=Oryza sativa subsp. indica GN=OsI_28220 PE=3 SV=1//1.2823e-25",127630235,127632946,"+",79768,"downstream"]
["chr6","LNC_004222","XLOC_042481","lncRNA",122846361,122846621,"+","Zm00001d037361_T001","Zm00001d037361",null,122861914,122862492,"+",15292,"upstream"]
["chr6","LNC_004222","XLOC_042481","lncRNA",122846361,122846621,"+","Zm00001d037362_T056","Zm00001d037362","sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=topA PE=3 SV=1//1.23969e-15",122863407,122878028,"-",16785,"downstream"]
["chr6","LNC_004227","XLOC_042580","lncRNA",127666699,127666965,"+","Zm00001d037505_T001","Zm00001d037505","sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1//1.57355e-13",127619128,127623532,"+",43166,"downstream"]
["chr6","LNC_004227","XLOC_042580","lncRNA",127666699,127666965,"+","Zm00001d037503_T005","Zm00001d037503","sp|F4KEW8|NET4A_ARATH Protein NETWORKED 4A OS=Arabidopsis thaliana GN=NET4A PE=2 SV=1//8.49737e-28",127564298,127574678,"+",92020,"downstream"]
["chr6","LNC_004224","XLOC_042491","lncRNA",123541532,123541792,"+","Zm00001d037377_T068","Zm00001d037377","sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus GN=PDS5B PE=2 SV=3//1.29102e-51",123567791,123595820,"-",25998,"downstream"]
["chr6","LNC_004163","XLOC_041947","lncRNA",90108971,90109439,"+","Zm00001d036481_T003","Zm00001d036481","sp|Q9SDY5|RCE1_ARATH NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1//2.10065e-78",90056629,90062992,"-",45978,"upstream"]
["chr6","LNC_004165","XLOC_042019","lncRNA",94220823,94221370,"+","Zm00001d036609_T006","Zm00001d036609","sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1//5.95488e-13",94235826,94238866,"+",14455,"upstream"]
["chr6","LNC_004165","XLOC_042019","lncRNA",94220823,94221370,"+","Zm00001d036609_T014","Zm00001d036609","sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1//5.95488e-13",94235892,94238842,"+",14521,"upstream"]
["chr6","LNC_004167","XLOC_042043","lncRNA",95551607,95552173,"+","Zm00001d036631_T008","Zm00001d036631","sp|Q8LBA6|PIS1_ARATH CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 OS=Arabidopsis thaliana GN=PIS1 PE=1 SV=2//5.25389e-07",95649703,95655758,"-",97529,"downstream"]
["chr6","LNC_004166","XLOC_042042","lncRNA",95548408,95549858,"+","Zm00001d036631_T012","Zm00001d036631","sp|Q8LBA6|PIS1_ARATH CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 OS=Arabidopsis thaliana GN=PIS1 PE=1 SV=2//5.25389e-07",95649717,95655123,"-",99858,"downstream"]
["chr3","LNC_002310","XLOC_022824","lncRNA",157920615,157920900,"+","Zm00001d042264_T008","Zm00001d042264","sp|Q9LYU8|AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1//1.7637e-14",158018621,158023262,"+",97720,"upstream"]
["chr4","LNC_003308","XLOC_032921","lncRNA",175560966,175561304,"-","Zm00001d051965_T005","Zm00001d051965","sp|Q53WJ1|JM703_ORYSJ Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica GN=JMJ703 PE=1 SV=1//1.12577e-141",175517547,175528189,"+",32776,"downstream"]
["chr4","LNC_003308","XLOC_032921","lncRNA",175560966,175561304,"-","Zm00001d051965_T033","Zm00001d051965","sp|Q53WJ1|JM703_ORYSJ Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica GN=JMJ703 PE=1 SV=1//1.12577e-141",175519950,175527918,"+",33047,"downstream"]
["chr4","LNC_003302","XLOC_032849","lncRNA",172149355,172149636,"-","Zm00001d051848_T002","Zm00001d051848","sp|Q93YP7|COQ2_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Arabidopsis thaliana GN=PPT1 PE=2 SV=1//3.31527e-126",172178913,172182151,"+",29276,"upstream"]
["chr4","LNC_003302","XLOC_032849","lncRNA",172149355,172149636,"-","Zm00001d051849_T007","Zm00001d051849","sp|Q9SSE9|JMJ25_ARATH Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana GN=JMJ25 PE=1 SV=1//1.88744e-32",172182566,172202446,"-",32929,"downstream"]
["chr4","LNC_003307","XLOC_032900","lncRNA",174673076,174674664,"-","Zm00001d051916_T005","Zm00001d051916","sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1//2.85312e-07",174615694,174619370,"-",53705,"upstream"]
["chr4","LNC_003307","XLOC_032900","lncRNA",174673076,174674664,"-","Zm00001d051925_T010","Zm00001d051925","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//2.53194e-31",174737631,174741885,"+",62966,"upstream"]
["chr1","LNC_000642","XLOC_006840","lncRNA",169625170,169625387,"-","Zm00001d030968_T004","Zm00001d030968","sp|Q9SR13|FLK_ARATH Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1//7.96062e-13",169609655,169615872,"+",9297,"downstream"]
["chr1","LNC_000647","XLOC_006874","lncRNA",173940661,173942349,"-","Zm00001d031020_T001","Zm00001d031020","sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1//1.33281e-22",173943638,173944196,"-",1288,"downstream"]
["chr2","LNC_001662","XLOC_016090","lncRNA",193552019,193554043,"+","Zm00001d005948_T001","Zm00001d005948","sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=2 SV=2//1.45422e-72",193530287,193553106,"-",-1088,"antisense"]
["chr2","LNC_001666","XLOC_016131","lncRNA",195287306,195290031,"+","Zm00001d006010_T001","Zm00001d006010",null,195228750,195230170,"+",57135,"downstream"]
["chr7","LNC_004946","XLOC_049581","lncRNA",87791594,87793388,"-","Zm00001d020038_T006","Zm00001d020038","sp|Q945S8|ASHH3_ARATH Histone-lysine N-methyltransferase ASHH3 OS=Arabidopsis thaliana GN=ASHH3 PE=2 SV=2//3.09493e-18",87799862,87811711,"-",6473,"downstream"]
["chr10","LNC_001279","XLOC_012661","lncRNA",119017663,119018188,"-","Zm00001d025450_T002","Zm00001d025450","sp|Q0JD07|C3H28_ORYSJ Zinc finger CCCH domain-containing protein 28 OS=Oryza sativa subsp. japonica GN=Os04g0438700 PE=2 SV=1//4.48867e-12",118965103,118969260,"+",48402,"downstream"]
["chr10","LNC_001276","XLOC_012631","lncRNA",118056276,118056480,"-","Zm00001d025418_T001","Zm00001d025418","sp|Q9FGG3|WTR45_ARATH WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1//1.34865e-10",118049167,118051288,"+",4987,"downstream"]
["chr10","LNC_001270","XLOC_012599","lncRNA",115270048,115270275,"-","Zm00001d025353_T015","Zm00001d025353",null,115197373,115205417,"+",64630,"downstream"]
["chr8","LNC_005122","XLOC_051335","lncRNA",9353729,9353938,"+","Zm00001d008461_T001","Zm00001d008461","sp|Q9FID6|Y5392_ARATH Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1//1.45118e-15",9343392,9343721,"-",10007,"upstream"]
["chr1","LNC_000443","XLOC_004895","lncRNA",9500332,9504705,"-","Zm00001d027630_T007","Zm00001d027630",null,9488593,9492120,"+",8211,"downstream"]
["chr8","LNC_005126","XLOC_051432","lncRNA",14474677,14475060,"+","Zm00001d008606_T003","Zm00001d008606",null,14359764,14381685,"+",92991,"downstream"]
["chr8","LNC_005127","XLOC_051454","lncRNA",15974404,15974741,"+","Zm00001d008654_T051","Zm00001d008654","sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2//2.69441e-13",16009761,16041635,"+",35019,"upstream"]
["chr2","LNC_001898","XLOC_018686","lncRNA",89992785,89996893,"-","Zm00001d004184_T001","Zm00001d004184","sp|Q8W4I7|CDPKD_ARATH Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2//1.74238e-40",89919422,89920260,"+",72524,"downstream"]
["chr3","LNC_002127","XLOC_021280","lncRNA",15108015,15108255,"+","Zm00001d039799_T001","Zm00001d039799","sp|Q9FG13|CXE15_ARATH Probable carboxylesterase 15 OS=Arabidopsis thaliana GN=CXE15 PE=2 SV=1//7.5363e-59",15169209,15170228,"+",60953,"upstream"]
["chr3","LNC_002120","XLOC_021113","lncRNA",7536646,7537065,"+","Zm00001d039536_T001","Zm00001d039536","sp|P93654|SYP22_ARATH Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1//1.57428e-46",7484018,7486445,"+",50200,"downstream"]
["chr3","LNC_002120","XLOC_021113","lncRNA",7536646,7537065,"+","Zm00001d039537_T069","Zm00001d039537","sp|Q6A332|ALY3_ARATH Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana GN=ALY3 PE=1 SV=1//7.49405e-53",7510697,7518230,"-",18415,"upstream"]
["chr5","LNC_003533","XLOC_035603","lncRNA",81903167,81921816,"+","Zm00001d015262_T001","Zm00001d015262","sp|Q7XCL0|EXLA2_ORYSJ Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1//1.73592e-34",81953902,81954549,"-",32085,"downstream"]
["chr5","LNC_003531","XLOC_035581","lncRNA",80058918,80059235,"+","Zm00001d015224_T001","Zm00001d015224","sp|D9J101|OMT8_MAIZE Benzoate O-methyltransferase OS=Zea mays GN=OMT8 PE=1 SV=1//5.49157e-22",80045134,80047032,"+",11885,"downstream"]
["chr9","LNC_005790","XLOC_057877","lncRNA",90845971,90846353,"+","Zm00001d046462_T001","Zm00001d046462",null,90937848,90937920,"+",91494,"upstream"]
["chr9","LNC_005794","XLOC_057889","lncRNA",91601473,91646545,"+","Zm00001d046476_T012","Zm00001d046476",null,91656904,91661702,"+",10358,"upstream"]
["chr2","LNC_001474","XLOC_014660","lncRNA",60481468,60481766,"+","Zm00001d003812_T003","Zm00001d003812","sp|Q9LFA2|KIPK_ARATH Serine/threonine-protein kinase KIPK OS=Arabidopsis thaliana GN=KIPK PE=1 SV=1//0",60529182,60533150,"+",47415,"upstream"]
["chr2","LNC_001473","XLOC_014658","lncRNA",60195791,60200900,"+","Zm00001d003807_T009","Zm00001d003807",null,60100273,60108261,"-",87529,"upstream"]
["chr6","LNC_004447","XLOC_044507","lncRNA",87750226,87750590,"-","Zm00001d036420_T009","Zm00001d036420",null,87683702,87688252,"-",61973,"upstream"]
["chr6","LNC_004442","XLOC_044495","lncRNA",86892193,86892399,"-","Zm00001d036403_T003","Zm00001d036403","sp|P45434|SSRA_ARATH Translocon-associated protein subunit alpha OS=Arabidopsis thaliana GN=At2g21160 PE=2 SV=3//7.76562e-08",86959814,86962422,"-",67414,"downstream"]
["chr6","LNC_004448","XLOC_044513","lncRNA",88254279,88254635,"-","Zm00001d036429_T009","Zm00001d036429","sp|Q8S8S2|LPCT2_ARATH Lysophospholipid acyltransferase LPEAT2 OS=Arabidopsis thaliana GN=LPEAT2 PE=1 SV=1//6.07882e-170",88157579,88161723,"-",92555,"upstream"]
["chrB73V4_ctg134","LNC_006178","XLOC_061593","lncRNA",60870,61277,"+","Zm00001d000269_T001","Zm00001d000269",null,16238,16308,"-",44561,"upstream"]
["chrB73V4_ctg134","LNC_006179","XLOC_061596","lncRNA",1,381,"-","Zm00001d000281_T001","Zm00001d000281",null,62189,62262,"-",61807,"downstream"]
["chr2","LNC_001787","XLOC_017844","lncRNA",28227452,28227933,"-","Zm00001d002963_T001","Zm00001d002963",null,28208055,28208127,"-",19324,"upstream"]
["chr2","LNC_001784","XLOC_017804","lncRNA",26352134,26352384,"-","Zm00001d002904_T005","Zm00001d002904","sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1//5.25884e-91",26291783,26293361,"+",58772,"downstream"]
["chr1","LNC_000785","XLOC_008064","lncRNA",249823248,249823474,"-","Zm00001d033077_T001","Zm00001d033077","sp|O80885|ARASP_ARATH Membrane metalloprotease ARASP, chloroplastic OS=Arabidopsis thaliana GN=ARASP PE=2 SV=1//5.78803e-120",249770156,249771444,"-",51803,"upstream"]
["chr1","LNC_000787","XLOC_008073","lncRNA",250177090,250178019,"-","Zm00001d033099_T001","Zm00001d033099","sp|Q9FJ98|RPD6A_ARATH DNA-directed RNA polymerases II, IV and V subunit 6A OS=Arabidopsis thaliana GN=NRPB6A PE=1 SV=1//1.34217e-41",250181558,250185445,"-",3538,"downstream"]
["chr1","LNC_000782","XLOC_008039","lncRNA",248221929,248222141,"-","Zm00001d033037_T058","Zm00001d033037","sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=2 SV=2//1.75712e-81",248201571,248213804,"+",8124,"downstream"]
["chr1","LNC_000782","XLOC_008039","lncRNA",248221929,248222141,"-","Zm00001d033037_T050","Zm00001d033037","sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=2 SV=2//1.75712e-81",248198123,248213901,"+",8027,"downstream"]
["chr1","LNC_000801","XLOC_008171","lncRNA",255266607,255274689,"-","Zm00001d033232_T001","Zm00001d033232",null,255276609,255280338,"-",1919,"downstream"]
["chr1","LNC_000439","XLOC_004895","lncRNA",9500332,9504704,"-","Zm00001d027633_T010","Zm00001d027633","sp|Q5S2C3|PIR_ARATH Protein PIR OS=Arabidopsis thaliana GN=PIR PE=1 SV=2//1.01452e-98",9547625,9612900,"+",42920,"upstream"]
["chr1","LNC_000439","XLOC_004895","lncRNA",9500332,9504704,"-","Zm00001d027626_T005","Zm00001d027626","sp|Q8TCB7|METL6_HUMAN Methyltransferase-like protein 6 OS=Homo sapiens GN=METTL6 PE=2 SV=2//2.96332e-19",9404918,9411381,"-",88950,"upstream"]
["chr8","LNC_005150","XLOC_051653","lncRNA",28586458,28588413,"+","Zm00001d008983_T006","Zm00001d008983","sp|Q9P7J5|YJNA_SCHPO Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.10c PE=3 SV=1//7.89336e-65",28562207,28566828,"-",19629,"upstream"]
["chr3","LNC_002460","XLOC_024574","lncRNA",13012665,13012922,"-","Zm00001d039729_T003","Zm00001d039729","sp|F4K4L7|TAF4B_ARATH Transcription initiation factor TFIID subunit 4b OS=Arabidopsis thaliana GN=TAF4B PE=1 SV=1//2.76964e-10",13049177,13066458,"-",36254,"downstream"]
["chr3","LNC_002459","XLOC_024565","lncRNA",12764170,12765514,"-","Zm00001d039712_T003","Zm00001d039712","sp|Q84VY2|NET4B_ARATH Protein NETWORKED 4B OS=Arabidopsis thaliana GN=NET4B PE=2 SV=1//2.67675e-43",12779935,12783215,"+",14420,"upstream"]
["chr6","LNC_004208","XLOC_042389","lncRNA",115274731,115275141,"+","Zm00001d037196_T003","Zm00001d037196","sp|Q69QA6|MCM9_ORYSJ Probable DNA helicase MCM9 OS=Oryza sativa subsp. japonica GN=MCM9 PE=2 SV=1//5.91694e-08",115288433,115299122,"-",13291,"downstream"]
["chr6","LNC_004201","XLOC_042354","lncRNA",113812791,113813410,"+","Zm00001d037140_T001","Zm00001d037140","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//0",113744465,113748815,"-",63975,"upstream"]
["chr6","LNC_004202","XLOC_042360","lncRNA",114102683,114103746,"+","Zm00001d037156_T085","Zm00001d037156","sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros OS=Drosophila melanogaster GN=rno PE=1 SV=1//2.94655e-13",114067888,114071804,"-",30878,"upstream"]
["chr6","LNC_004143","XLOC_041771","lncRNA",78550763,78550971,"+","Zm00001d036238_T001","Zm00001d036238","sp|Q9FXJ1|GDL6_ARATH GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1//3.34572e-82",78463989,78465795,"+",84967,"downstream"]
["chr6","LNC_004140","XLOC_041743","lncRNA",76698837,76699121,"+","Zm00001d036196_T001","Zm00001d036196","sp|Q93062|RBPMS_HUMAN RNA-binding protein with multiple splicing OS=Homo sapiens GN=RBPMS PE=1 SV=1//1.68351e-12",76728367,76733964,"+",29245,"upstream"]
["chr6","LNC_004144","XLOC_041772","lncRNA",78583822,78584165,"+","Zm00001d036240_T007","Zm00001d036240","sp|Q8L7M1|B3GTE_ARATH Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1//6.25436e-30",78616767,78617748,"+",32601,"upstream"]
["chr5","LNC_003494","XLOC_035151","lncRNA",47179317,47179558,"+","Zm00001d014442_T003","Zm00001d014442","sp|F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana GN=EDR2 PE=2 SV=1//1.19331e-34",47122533,47132149,"+",47167,"downstream"]
["chr5","LNC_003497","XLOC_035156","lncRNA",47925620,47925877,"+","Zm00001d014453_T001","Zm00001d014453",null,48008446,48008529,"-",82568,"downstream"]
["chr8","LNC_005639","XLOC_056413","lncRNA",172141369,172141894,"-","Zm00001d012295_T002","Zm00001d012295","sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2//1.10842e-11",172039519,172048923,"-",92445,"upstream"]
["chr8","LNC_005632","XLOC_056312","lncRNA",168380085,168380530,"-","Zm00001d012108_T001","Zm00001d012108","sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1//1.21915e-06",168364890,168371145,"-",8939,"upstream"]
["chr8","LNC_005630","XLOC_056267","lncRNA",166478653,166479075,"-","Zm00001d012007_T002","Zm00001d012007","sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana GN=CBSCBSPB5 PE=1 SV=1//1.00228e-16",166418982,166423965,"-",54687,"upstream"]
["chr8","LNC_005631","XLOC_056304","lncRNA",168150971,168151328,"-","Zm00001d012100_T036","Zm00001d012100","sp|A3C6D7|ACT2_ORYSJ Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1//1.35933e-36",168244374,168249570,"-",93045,"downstream"]
["chr8","LNC_005631","XLOC_056304","lncRNA",168150971,168151328,"-","Zm00001d012100_T011","Zm00001d012100","sp|A3C6D7|ACT2_ORYSJ Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1//1.35933e-36",168244313,168249503,"-",92984,"downstream"]
["chr8","LNC_005637","XLOC_056360","lncRNA",170439922,170444075,"-","Zm00001d012228_T003","Zm00001d012228","sp|Q70FG7|DODA_BETVU 4,5-DOPA dioxygenase extradiol OS=Beta vulgaris GN=DODA PE=1 SV=1//6.76605e-16",170458736,170461967,"+",14660,"upstream"]
["chr8","LNC_005634","XLOC_056349","lncRNA",170167597,170167805,"-","Zm00001d012213_T004","Zm00001d012213",null,170144186,170164755,"-",2841,"upstream"]
["chr2","LNC_001640","XLOC_015918","lncRNA",182696904,182697109,"+","Zm00001d005663_T001","Zm00001d005663","sp|Q6H4G3|SDHB2_ORYSJ Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-2 PE=1 SV=1//2.10208e-150",182688634,182689557,"-",7346,"upstream"]
["chr2","LNC_001645","XLOC_015954","lncRNA",185154904,185155328,"+","Zm00001d005732_T010","Zm00001d005732","sp|Q40742|RAD23_ORYSJ Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2//8.44238e-21",185158436,185164378,"+",3107,"upstream"]
["chr2","LNC_001648","XLOC_015980","lncRNA",187132256,187132615,"+","Zm00001d005764_T001","Zm00001d005764",null,187147474,187151967,"+",14858,"upstream"]
["chr7","LNC_004929","XLOC_049468","lncRNA",73315216,73315623,"-","Zm00001d019889_T002","Zm00001d019889",null,73325976,73329705,"+",10352,"upstream"]
["chr10","LNC_001251","XLOC_012382","lncRNA",98563314,98565457,"-","Zm00001d024998_T072","Zm00001d024998","sp|B9FK36|ACC2_ORYSJ Acetyl-CoA carboxylase 2 OS=Oryza sativa subsp. japonica GN=ACC2 PE=3 SV=2//0",98543837,98563327,"+",-14,"antisense"]
["chr10","LNC_001251","XLOC_012382","lncRNA",98563314,98565457,"-","Zm00001d024998_T090","Zm00001d024998","sp|B9FK36|ACC2_ORYSJ Acetyl-CoA carboxylase 2 OS=Oryza sativa subsp. japonica GN=ACC2 PE=3 SV=2//0",98543849,98563348,"+",-35,"antisense"]
["chr10","LNC_001254","XLOC_012398","lncRNA",100288241,100288550,"-","Zm00001d025024_T010","Zm00001d025024",null,100210204,100246375,"+",41865,"downstream"]
["chr10","LNC_001255","XLOC_012435","lncRNA",103991801,103992010,"-","Zm00001d025100_T014","Zm00001d025100","sp|P15170|ERF3A_HUMAN Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1//1.92078e-09",104005374,104011736,"-",13363,"downstream"]
["chr3","LNC_002699","XLOC_026714","lncRNA",193957051,193957288,"-","Zm00001d043274_T012","Zm00001d043274","sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1//3.88156e-11",194032408,194067320,"-",75119,"downstream"]
["chr3","LNC_002698","XLOC_026713","lncRNA",193932716,193933122,"-","Zm00001d043274_T012","Zm00001d043274","sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1//3.88156e-11",194032408,194067320,"-",99285,"downstream"]
["chr3","LNC_002693","XLOC_026608","lncRNA",189304252,189304546,"-","Zm00001d043101_T001","Zm00001d043101","sp|O22682|CYSK4_ARATH Probable S-sulfocysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=1 SV=1//1.75503e-32",189202602,189205566,"+",98685,"downstream"]
["chr3","LNC_002697","XLOC_026709","lncRNA",193774850,193775433,"-","Zm00001d043268_T001","Zm00001d043268","sp|O50003|RL12_PRUAR 60S ribosomal protein L12 OS=Prunus armeniaca GN=RPL12 PE=2 SV=1//9.37705e-53",193854722,193855913,"-",79288,"downstream"]
["chr8","LNC_005401","XLOC_054398","lncRNA",22141263,22141800,"-","Zm00001d008839_T003","Zm00001d008839",null,22128141,22132245,"-",9017,"upstream"]
["chr9","LNC_005988","XLOC_059768","lncRNA",40058109,40058320,"-","Zm00001d045804_T018","Zm00001d045804","sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1//1.29168e-07",40102895,40107915,"-",44574,"downstream"]
["chr9","LNC_005986","XLOC_059766","lncRNA",40007754,40008447,"-","Zm00001d045804_T010","Zm00001d045804","sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1//1.29168e-07",40102340,40107973,"-",93892,"downstream"]
["chr2","LNC_001414","XLOC_014234","lncRNA",31393274,31393803,"+","Zm00001d003081_T001","Zm00001d003081","sp|P55142|GRXC6_ORYSJ Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2//1.00717e-17",31389813,31393200,"-",73,"upstream"]
["chr2","LNC_001415","XLOC_014245","lncRNA",32126164,32126450,"+","Zm00001d003101_T005","Zm00001d003101","sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1//8.82776e-34",32083280,32088499,"+",37664,"downstream"]
["chr6","LNC_004468","XLOC_044661","lncRNA",97053752,97098546,"-","Zm00001d036669_T024","Zm00001d036669","sp|A3C6D7|ACT2_ORYSJ Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1//3.82986e-33",97158095,97172378,"+",59548,"upstream"]
["chr6","LNC_004469","XLOC_044672","lncRNA",97603505,97605434,"-","Zm00001d036684_T001","Zm00001d036684",null,97508062,97510725,"+",92779,"downstream"]
["chr6","LNC_004463","XLOC_044657","lncRNA",96635936,96640475,"-","Zm00001d036656_T002","Zm00001d036656","sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1//7.38547e-63",96573395,96579903,"+",56032,"downstream"]
["chr6","LNC_004465","XLOC_044657","lncRNA",96636384,96640475,"-","Zm00001d036655_T004","Zm00001d036655","sp|Q8N8Q3|ENDOV_HUMAN Endonuclease V OS=Homo sapiens GN=ENDOV PE=1 SV=1//3.33666e-23",96564645,96572729,"+",63654,"downstream"]
["chr6","LNC_004467","XLOC_044657","lncRNA",96640668,96641583,"-","Zm00001d036656_T002","Zm00001d036656","sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1//7.38547e-63",96573395,96579903,"+",60764,"downstream"]
["chr3","LNC_002502","XLOC_024901","lncRNA",35585386,35586439,"-","Zm00001d040279_T005","Zm00001d040279","sp|Q9LRZ0|TPR2_ARATH Topless-related protein 2 OS=Arabidopsis thaliana GN=TPR2 PE=1 SV=2//0",35510669,35519153,"-",66232,"upstream"]
["chr3","LNC_002504","XLOC_024921","lncRNA",36854565,36854912,"-","Zm00001d040305_T024","Zm00001d040305","sp|Q5R4M2|ULK4_PONAB Serine/threonine-protein kinase ULK4 OS=Pongo abelii GN=ULK4 PE=2 SV=1//1.73809e-20",36894217,36901881,"-",39304,"downstream"]
["chr4","LNC_003110","XLOC_031048","lncRNA",11820549,11820894,"-","Zm00001d048992_T001","Zm00001d048992",null,11826554,11827210,"-",5659,"downstream"]
["chr4","LNC_003112","XLOC_031051","lncRNA",11949660,11950595,"-","Zm00001d048994_T003","Zm00001d048994","sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1//3.12631e-144",11914894,11923312,"+",26347,"downstream"]
["chr8","LNC_005366","XLOC_054119","lncRNA",6138913,6139376,"-","Zm00001d008357_T003","Zm00001d008357","sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2//0",6174501,6177495,"-",35124,"downstream"]
["chr1","LNC_000241","XLOC_002382","lncRNA",178459277,178461072,"+","Zm00001d031126_T001","Zm00001d031126","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//9.64431e-40",178553061,178553878,"-",91988,"downstream"]
["chr3","LNC_002446","XLOC_024384","lncRNA",3000024,3000325,"-","Zm00001d039385_T031","Zm00001d039385","sp|Q5QNI1|KAT2_ORYSJ Potassium channel KAT2 OS=Oryza sativa subsp. japonica GN=Os01g0210700 PE=2 SV=2//6.69861e-08",3098902,3107566,"-",98576,"downstream"]
["chr3","LNC_002446","XLOC_024384","lncRNA",3000024,3000325,"-","Zm00001d039380_T010","Zm00001d039380","sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SYNO PE=2 SV=3//1.00976e-12",2951196,2959604,"-",40419,"upstream"]
["chr3","LNC_002447","XLOC_024394","lncRNA",3602387,3602682,"-","Zm00001d039409_T005","Zm00001d039409","sp|P40234|CKI2_SCHPO Casein kinase I homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cki2 PE=1 SV=2//2.09646e-58",3620280,3630504,"-",17597,"downstream"]
["chr3","LNC_002442","XLOC_024359","lncRNA",2169042,2169727,"-","Zm00001d039341_T006","Zm00001d039341","sp|Q9S814|EIN2_ARATH Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1//4.877e-17",2111852,2119625,"-",49416,"upstream"]
["chr3","LNC_002442","XLOC_024359","lncRNA",2169042,2169727,"-","Zm00001d039341_T124","Zm00001d039341","sp|Q9S814|EIN2_ARATH Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1//4.877e-17",2111992,2119651,"-",49390,"upstream"]
["chr8","LNC_005363","XLOC_054090","lncRNA",4384050,4384502,"-","Zm00001d008294_T007","Zm00001d008294","sp|Q9QZE7|TSNAX_MOUSE Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1//1.05428e-13",4374543,4380198,"+",3851,"downstream"]
["chr3","LNC_002448","XLOC_024401","lncRNA",3837098,3837551,"-","Zm00001d039421_T104","Zm00001d039421",null,3856407,3863815,"-",18855,"downstream"]
["chr3","LNC_002448","XLOC_024401","lncRNA",3837098,3837551,"-","Zm00001d039417_T028","Zm00001d039417","sp|B7F9G7|ADPO1_ORYSJ Heptahelical transmembrane protein ADIPOR1 OS=Oryza sativa subsp. japonica GN=ADIPOR1 PE=2 SV=1//7.95304e-12",3828080,3837023,"+",74,"downstream"]
["chr3","LNC_002448","XLOC_024401","lncRNA",3837098,3837551,"-","Zm00001d039421_T087","Zm00001d039421",null,3856369,3863828,"-",18817,"downstream"]
["chr3","LNC_002448","XLOC_024401","lncRNA",3837098,3837551,"-","Zm00001d039421_T097","Zm00001d039421",null,3856403,3863102,"-",18851,"downstream"]
["chr3","LNC_002448","XLOC_024401","lncRNA",3837098,3837551,"-","Zm00001d039417_T131","Zm00001d039417","sp|B7F9G7|ADPO1_ORYSJ Heptahelical transmembrane protein ADIPOR1 OS=Oryza sativa subsp. japonica GN=ADIPOR1 PE=2 SV=1//7.95304e-12",3828169,3837026,"+",71,"downstream"]
["chr3","LNC_002449","XLOC_024423","lncRNA",4642469,4642723,"-","Zm00001d039451_T007","Zm00001d039451","sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mrnC PE=3 SV=1//8.71969e-07",4734432,4737188,"-",91708,"downstream"]
["chr1","LNC_000248","XLOC_002493","lncRNA",185868262,185869425,"+","Zm00001d031316_T003","Zm00001d031316","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//5.54579e-160",185876713,185882166,"-",7287,"downstream"]
["chrB73V4_ctg98","LNC_006263","XLOC_062127","lncRNA",79897,80717,"+","Zm00001d000228_T076","Zm00001d000228","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//3.29823e-12",12718,19073,"-",60823,"upstream"]
["chrB73V4_ctg98","LNC_006263","XLOC_062127","lncRNA",79897,80717,"+","Zm00001d000228_T036","Zm00001d000228","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//3.29823e-12",12655,18803,"-",61093,"upstream"]
["chr4","LNC_002998","XLOC_029687","lncRNA",176976967,176996314,"+","Zm00001d052033_T002","Zm00001d052033",null,176969204,176972630,"+",4336,"downstream"]
["chr4","LNC_002997","XLOC_029660","lncRNA",175899519,175901022,"+","Zm00001d051980_T001","Zm00001d051980","sp|Q67YI9|EPN2_ARATH Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana GN=EPSIN2 PE=1 SV=1//7.46825e-21",175828750,175835071,"+",64447,"downstream"]
["chr4","LNC_002994","XLOC_029618","lncRNA",174354564,174355073,"+","Zm00001d051912_T001","Zm00001d051912","sp|Q40648|KCAB_ORYSJ Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2//0",174430425,174434646,"-",75351,"downstream"]
["chr4","LNC_002990","XLOC_029574","lncRNA",171678157,171682251,"+","Zm00001d051839_T004","Zm00001d051839","sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2//8.29374e-09",171776484,171796410,"-",94232,"downstream"]
["chr4","LNC_002991","XLOC_029574","lncRNA",171678157,171682251,"+","Zm00001d051837_T001","Zm00001d051837","sp|Q6K973|SUS6_ORYSJ Sucrose synthase 6 OS=Oryza sativa subsp. japonica GN=SUS6 PE=2 SV=1//0",171679681,171683198,"-",-2571,"antisense"]
["chrMt","LNC_006267","XLOC_062159","lncRNA",215626,216962,"+","GRMZM5G884707_T01","GRMZM5G884707","sp|P04165|CYB_MAIZE Cytochrome b OS=Zea mays GN=MT-CYB PE=3 SV=2//0",310906,312072,"+",93943,"upstream"]
["chrMt","LNC_006267","XLOC_062159","lncRNA",215626,216962,"+","GRMZM5G856027_T01","GRMZM5G856027","sp|Q36450|NDUS2_NICSY NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1//0",238986,243574,"-",22023,"downstream"]
["chrMt","LNC_006268","XLOC_062163","lncRNA",256977,258867,"+","GRMZM5G844605_T01","GRMZM5G844605",null,168897,169217,"-",87759,"upstream"]
["chrMt","LNC_006269","XLOC_062167","lncRNA",290727,293268,"+","GRMZM5G881661_T01","GRMZM5G881661",null,295310,295627,"+",2041,"upstream"]
["chrMt","LNC_006269","XLOC_062167","lncRNA",290727,293268,"+","GRMZM5G851769_T01","GRMZM5G851769","sp|P0A3U1|LTRA_LACLM Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=ltrA PE=1 SV=1//5.49909e-25",267745,269870,"-",20856,"upstream"]
["chr6","LNC_004267","XLOC_043101","lncRNA",157583243,157583525,"+","Zm00001d038460_T008","Zm00001d038460","sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At3g08860 PE=2 SV=1//1.18213e-08",157677668,157682181,"-",94142,"downstream"]
["chr6","LNC_004264","XLOC_043068","lncRNA",156255575,156255842,"+","Zm00001d038393_T009","Zm00001d038393","sp|Q32NW2|LENG8_XENLA Leukocyte receptor cluster member 8 homolog OS=Xenopus laevis GN=leng8 PE=2 SV=1//5.8378e-62",156266629,156278451,"-",10786,"downstream"]
["chr6","LNC_004262","XLOC_043038","lncRNA",154865922,154866163,"+","Zm00001d038346_T001","Zm00001d038346",null,154922720,154925030,"-",56556,"downstream"]
["chr6","LNC_004263","XLOC_043040","lncRNA",154899080,154899283,"+","Zm00001d038342_T002","Zm00001d038342",null,154872175,154875711,"+",23368,"downstream"]
["chr6","LNC_004269","XLOC_043115","lncRNA",158307904,158308325,"+","Zm00001d038475_T004","Zm00001d038475","sp|Q869L3|MDN1_DICDI Midasin OS=Dictyostelium discoideum GN=mdn1 PE=3 SV=2//6.5604e-08",158260875,158284336,"+",23567,"downstream"]
["chr6","LNC_004269","XLOC_043115","lncRNA",158307904,158308325,"+","Zm00001d038482_T001","Zm00001d038482","sp|F4K5L5|TBL16_ARATH Protein trichome birefringence-like 16 OS=Arabidopsis thaliana GN=TBL16 PE=2 SV=1//1.17714e-47",158362218,158362625,"-",53892,"downstream"]
["chr6","LNC_004120","XLOC_041592","lncRNA",61879163,61879485,"+","Zm00001d035954_T001","Zm00001d035954",null,61885363,61887624,"+",5877,"upstream"]
["chr7","LNC_004696","XLOC_047062","lncRNA",76692003,76699075,"+","Zm00001d019926_T010","Zm00001d019926","sp|Q6H5J0|FABI2_ORYSJ Enoyl-[acyl-carrier-protein] reductase [NADH] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0277800 PE=2 SV=1//6.37202e-74",76711235,76715356,"-",12159,"downstream"]
["chr5","LNC_003472","XLOC_034922","lncRNA",29997086,29997345,"+","Zm00001d014037_T002","Zm00001d014037","sp|Q9XGR4|2AB2A_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B&apos;&apos;alpha OS=Arabidopsis thaliana GN=B&apos;&apos;ALPHA PE=1 SV=1//6.55135e-35",30097117,30113105,"-",99771,"downstream"]
["chr5","LNC_003473","XLOC_034923","lncRNA",30000190,30000628,"+","Zm00001d014037_T003","Zm00001d014037","sp|Q9XGR4|2AB2A_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B&apos;&apos;alpha OS=Arabidopsis thaliana GN=B&apos;&apos;ALPHA PE=1 SV=1//6.55135e-35",30097117,30113105,"-",96488,"downstream"]
["chr5","LNC_003477","XLOC_034967","lncRNA",33588810,33589071,"+","Zm00001d014129_T003","Zm00001d014129","sp|Q940M4|OCT7_ARATH Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana GN=OCT7 PE=2 SV=1//1.32672e-20",33511598,33517765,"-",71044,"upstream"]
["chr5","LNC_003474","XLOC_034924","lncRNA",30003054,30003274,"+","Zm00001d014036_T001","Zm00001d014036","sp|Q93YV7|PMT3_ARATH Probable methyltransferase PMT3 OS=Arabidopsis thaliana GN=At4g14360 PE=2 SV=1//7.25572e-28",29988171,29994678,"-",8375,"upstream"]
["chr5","LNC_003479","XLOC_035041","lncRNA",38417593,38417943,"+","Zm00001d014261_T019","Zm00001d014261",null,38492629,38496845,"+",74685,"upstream"]
["chr5","LNC_003479","XLOC_035041","lncRNA",38417593,38417943,"+","Zm00001d014261_T056","Zm00001d014261",null,38492660,38497501,"+",74716,"upstream"]
["chr5","LNC_003479","XLOC_035041","lncRNA",38417593,38417943,"+","Zm00001d014262_T002","Zm00001d014262",null,38500594,38503678,"+",82650,"upstream"]
["chr8","LNC_005618","XLOC_056143","lncRNA",161715534,161715755,"-","Zm00001d011803_T004","Zm00001d011803","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//3.54466e-28",161769900,161773104,"-",54144,"downstream"]
["chr8","LNC_005618","XLOC_056143","lncRNA",161715534,161715755,"-","Zm00001d011800_T001","Zm00001d011800",null,161728428,161729057,"+",12672,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T008","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161718038,161722711,"-",10254,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T009","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161719313,161722708,"-",10257,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T004","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161717957,161722781,"-",10184,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T005","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161718015,161722766,"-",10199,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T006","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161718017,161722721,"-",10244,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T007","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161718036,161722705,"-",10260,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T001","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161717957,161722781,"-",10184,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T002","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161717957,161722781,"-",10184,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T003","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161717957,161722781,"-",10184,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d008128_T001","Zm00001d008128",null,161765144,161765413,"+",31913,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011799_T001","Zm00001d011799",null,161724919,161726722,"+",6243,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011802_T001","Zm00001d011802","sp|B9RU15|ATXR5_RICCO Probable Histone-lysine N-methyltransferase ATXR5 OS=Ricinus communis GN=ATXR5 PE=1 SV=1//1.59726e-132",161757825,161764087,"-",24594,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011795_T001","Zm00001d011795","sp|Q9AST6|VSP55_ARATH Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana GN=At1g32410 PE=2 SV=1//6.46905e-12",161712851,161713572,"-",19393,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011797_T002","Zm00001d011797","sp|Q8RWM7|CCB3_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana GN=CCB3 PE=1 SV=1//3.66087e-50",161722935,161723929,"+",9036,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011797_T001","Zm00001d011797","sp|Q8RWM7|CCB3_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana GN=CCB3 PE=1 SV=1//3.66087e-50",161722919,161723925,"+",9040,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011791_T001","Zm00001d011791","sp|Q8GXG1|ASPGB_ARATH Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2//5.76829e-12",161666961,161668296,"-",64669,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011796_T010","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",161720100,161722781,"-",10184,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T001","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161705740,161707165,"+",25800,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T002","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161705757,161708984,"+",23981,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T003","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161705757,161709095,"+",23870,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T004","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161705757,161709095,"+",23870,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T005","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161705757,161709095,"+",23870,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T006","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161705810,161709095,"+",23870,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T007","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161705871,161709019,"+",23946,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T008","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161706018,161709045,"+",23920,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011792_T009","Zm00001d011792","sp|Q8S9Z2|AXS_ORYSJ UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica GN=Os01g0969100 PE=2 SV=1//0",161706363,161709084,"+",23881,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011793_T001","Zm00001d011793",null,161710731,161711838,"-",21127,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011794_T001","Zm00001d011794",null,161712611,161712690,"-",20275,"upstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011790_T002","Zm00001d011790","sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2//3.24844e-88",161650586,161666667,"+",66298,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011790_T001","Zm00001d011790","sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2//3.24844e-88",161650580,161666693,"+",66272,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011803_T003","Zm00001d011803","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//3.54466e-28",161769734,161773104,"-",36503,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011803_T002","Zm00001d011803","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//3.54466e-28",161769734,161773104,"-",36503,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011803_T001","Zm00001d011803","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//3.54466e-28",161769734,161771290,"-",36503,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011803_T004","Zm00001d011803","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//3.54466e-28",161769900,161773104,"-",36669,"downstream"]
["chr8","LNC_005619","XLOC_056146","lncRNA",161732966,161733230,"-","Zm00001d011800_T001","Zm00001d011800",null,161728428,161729057,"+",3908,"downstream"]
["chr8","LNC_005614","XLOC_056079","lncRNA",159354706,159354924,"-","Zm00001d011706_T003","Zm00001d011706","sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=2 SV=2//3.10487e-15",159306374,159314076,"+",40629,"downstream"]
["chr8","LNC_005614","XLOC_056079","lncRNA",159354706,159354924,"-","Zm00001d011706_T002","Zm00001d011706","sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=2 SV=2//3.10487e-15",159306374,159314076,"+",40629,"downstream"]
["chr8","LNC_005614","XLOC_056079","lncRNA",159354706,159354924,"-","Zm00001d011708_T001","Zm00001d011708","sp|F4ITL6|RTE1_ARATH Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 SV=1//1.57789e-97",159401583,159404367,"+",46658,"upstream"]
["chr8","LNC_005614","XLOC_056079","lncRNA",159354706,159354924,"-","Zm00001d011707_T001","Zm00001d011707","sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1//4.22875e-71",159315622,159317923,"+",36782,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011747_T001","Zm00001d011747","sp|P93013|AGP30_ARATH Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana GN=AGP30 PE=2 SV=1//1.49983e-08",160680862,160681664,"-",41270,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011753_T001","Zm00001d011753","sp|Q682H0|HA22F_ARATH HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1//1.2265e-62",160753687,160755164,"-",30464,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011746_T004","Zm00001d011746","sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1//0",160673888,160678247,"+",44687,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011756_T002","Zm00001d011756","sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1//4.40254e-38",160818562,160825302,"+",95339,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011756_T003","Zm00001d011756","sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1//4.40254e-38",160818593,160825414,"+",95370,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011746_T001","Zm00001d011746","sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1//0",160671478,160678247,"+",44687,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011746_T003","Zm00001d011746","sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1//0",160673288,160678347,"+",44587,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011746_T002","Zm00001d011746","sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1//0",160671478,160678347,"+",44587,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011745_T004","Zm00001d011745","sp|Q5JNA1|Y1237_ORYSJ B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os01g0723700 PE=2 SV=1//3.39556e-26",160627068,160632198,"-",90736,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011745_T005","Zm00001d011745","sp|Q5JNA1|Y1237_ORYSJ B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os01g0723700 PE=2 SV=1//3.39556e-26",160627226,160632198,"-",90736,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011754_T001","Zm00001d011754",null,160755483,160759763,"-",32260,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011755_T001","Zm00001d011755",null,160797624,160798695,"-",74401,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011748_T001","Zm00001d011748","sp|Q8S151|MAD32_ORYSJ MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1//1.6112e-87",160706837,160710739,"-",12195,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011745_T002","Zm00001d011745","sp|Q5JNA1|Y1237_ORYSJ B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os01g0723700 PE=2 SV=1//3.39556e-26",160627041,160632198,"-",90736,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011756_T001","Zm00001d011756","sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1//4.40254e-38",160818522,160825421,"+",95299,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011751_T001","Zm00001d011751",null,160749792,160750217,"-",26569,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011743_T001","Zm00001d011743","sp|P79051|RHP16_SCHPO ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp16 PE=3 SV=2//3.04098e-53",160621394,160623569,"-",99365,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011744_T001","Zm00001d011744","sp|Q80SY5|PR38B_MOUSE Pre-mRNA-splicing factor 38B OS=Mus musculus GN=Prpf38b PE=1 SV=1//8.99965e-22",160624165,160626163,"-",96771,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011752_T001","Zm00001d011752",null,160751664,160751936,"-",28441,"downstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011750_T002","Zm00001d011750","sp|Q9LQI7|CIA30_ARATH Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g17350 PE=1 SV=2//3.33517e-111",160744528,160748987,"+",21305,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011750_T003","Zm00001d011750","sp|Q9LQI7|CIA30_ARATH Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g17350 PE=1 SV=2//3.33517e-111",160744544,160748987,"+",21321,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011750_T001","Zm00001d011750","sp|Q9LQI7|CIA30_ARATH Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g17350 PE=1 SV=2//3.33517e-111",160744068,160748986,"+",20845,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011745_T001","Zm00001d011745","sp|Q5JNA1|Y1237_ORYSJ B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os01g0723700 PE=2 SV=1//3.39556e-26",160627041,160632198,"-",90736,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011750_T004","Zm00001d011750","sp|Q9LQI7|CIA30_ARATH Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g17350 PE=1 SV=2//3.33517e-111",160744863,160748810,"+",21640,"upstream"]
["chr8","LNC_005615","XLOC_056102","lncRNA",160722935,160723222,"-","Zm00001d011745_T003","Zm00001d011745","sp|Q5JNA1|Y1237_ORYSJ B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os01g0723700 PE=2 SV=1//3.39556e-26",160627041,160632198,"-",90736,"upstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011755_T001","Zm00001d011755",null,160797624,160798695,"-",84758,"upstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011756_T001","Zm00001d011756","sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1//4.40254e-38",160818522,160825421,"+",58032,"downstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011756_T002","Zm00001d011756","sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1//4.40254e-38",160818562,160825302,"+",58151,"downstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011756_T003","Zm00001d011756","sp|P73555|Y875_SYNY3 Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1//4.40254e-38",160818593,160825414,"+",58039,"downstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011760_T001","Zm00001d011760","sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAJ1 PE=1 SV=1//2.78129e-12",160944524,160947119,"+",60833,"upstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011758_T001","Zm00001d011758",null,160885990,160890793,"+",2299,"upstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011757_T001","Zm00001d011757","sp|Q5PP26|PII2_ARATH Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1//3.41997e-48",160827185,160828531,"+",54922,"downstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011759_T001","Zm00001d011759","sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1//0",160937042,160941578,"+",53351,"upstream"]
["chr8","LNC_005616","XLOC_056109","lncRNA",160883454,160883690,"-","Zm00001d011761_T001","Zm00001d011761","sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1//2.91681e-10",160949609,160951534,"+",65918,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011786_T001","Zm00001d011786","sp|P49100|CYB5_ORYSJ Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2//1.74056e-81",161548685,161550315,"-",21991,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011785_T001","Zm00001d011785","sp|Q94DH3|PCL1_ORYSJ Transcription factor PCL1 OS=Oryza sativa subsp. japonica GN=PCL1 PE=2 SV=1//9.05309e-78",161545498,161546157,"+",26149,"downstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011788_T001","Zm00001d011788","sp|Q9STK5|PP269_ARATH Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2 SV=1//3.49723e-150",161618982,161621182,"+",46410,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011790_T001","Zm00001d011790","sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2//3.24844e-88",161650580,161666693,"+",78008,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011781_T001","Zm00001d011781","sp|Q10430|SPC25_SCHPO Kinetochore protein spc25 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spc25 PE=1 SV=1//1.4092e-06",161472200,161475123,"+",97183,"downstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011791_T001","Zm00001d011791","sp|Q8GXG1|ASPGB_ARATH Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2//5.76829e-12",161666961,161668296,"-",94389,"downstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011784_T001","Zm00001d011784",null,161511637,161511945,"+",60361,"downstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011783_T001","Zm00001d011783",null,161478399,161478689,"+",93617,"downstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011790_T002","Zm00001d011790","sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2//3.24844e-88",161650586,161666667,"+",78014,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011789_T001","Zm00001d011789",null,161623974,161624864,"-",51402,"downstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011787_T001","Zm00001d011787","sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=2 SV=2//7.3109e-152",161553753,161554910,"-",17396,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011782_T001","Zm00001d011782","sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1//3.30862e-15",161475214,161477307,"-",94999,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011782_T003","Zm00001d011782","sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1//3.30862e-15",161475224,161477513,"-",94793,"upstream"]
["chr8","LNC_005617","XLOC_056137","lncRNA",161572307,161572571,"-","Zm00001d011782_T002","Zm00001d011782","sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1//3.30862e-15",161475214,161477513,"-",94793,"upstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011648_T001","Zm00001d011648","sp|Q9C829|NU50A_ARATH Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana GN=NUP50A PE=1 SV=1//6.90542e-09",157442417,157443844,"-",62693,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011645_T001","Zm00001d011645","sp|Q38850|MYB5_ARATH Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1//1.50875e-61",157426995,157428942,"+",47271,"upstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011643_T001","Zm00001d011643","sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1//5.24016e-158",157374297,157378344,"-",1164,"upstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011644_T004","Zm00001d011644","sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana GN=ABCB11 PE=2 SV=1//5.57119e-136",157385900,157388487,"-",6176,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011650_T001","Zm00001d011650",null,157470984,157471706,"-",91260,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011649_T001","Zm00001d011649","sp|Q4R1I9|ANGLT_ROSHC Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1//9.124e-127",157447787,157449229,"-",68063,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011644_T001","Zm00001d011644","sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana GN=ABCB11 PE=2 SV=1//5.57119e-136",157385847,157388506,"-",6123,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011644_T002","Zm00001d011644","sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana GN=ABCB11 PE=2 SV=1//5.57119e-136",157385847,157391117,"-",6123,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011644_T003","Zm00001d011644","sp|Q9FWX7|AB11B_ARATH ABC transporter B family member 11 OS=Arabidopsis thaliana GN=ABCB11 PE=2 SV=1//5.57119e-136",157385847,157391117,"-",6123,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011646_T002","Zm00001d011646","sp|B0JZ89|FA32A_XENTR Protein FAM32A OS=Xenopus tropicalis GN=fam32a PE=3 SV=1//7.51188e-08",157428446,157432718,"-",48722,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011646_T003","Zm00001d011646","sp|B0JZ89|FA32A_XENTR Protein FAM32A OS=Xenopus tropicalis GN=fam32a PE=3 SV=1//7.51188e-08",157428583,157432715,"-",48859,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011646_T001","Zm00001d011646","sp|B0JZ89|FA32A_XENTR Protein FAM32A OS=Xenopus tropicalis GN=fam32a PE=3 SV=1//7.51188e-08",157428446,157432718,"-",48722,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011646_T006","Zm00001d011646","sp|B0JZ89|FA32A_XENTR Protein FAM32A OS=Xenopus tropicalis GN=fam32a PE=3 SV=1//7.51188e-08",157431006,157432723,"-",51282,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011646_T004","Zm00001d011646","sp|B0JZ89|FA32A_XENTR Protein FAM32A OS=Xenopus tropicalis GN=fam32a PE=3 SV=1//7.51188e-08",157430552,157432718,"-",50828,"downstream"]
["chr8","LNC_005610","XLOC_056045","lncRNA",157379509,157379723,"-","Zm00001d011646_T005","Zm00001d011646","sp|B0JZ89|FA32A_XENTR Protein FAM32A OS=Xenopus tropicalis GN=fam32a PE=3 SV=1//7.51188e-08",157430993,157432511,"-",51269,"downstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011658_T001","Zm00001d011658",null,157722173,157725722,"+",94430,"downstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d008127_T001","Zm00001d008127",null,157815246,157815555,"-",4597,"upstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011661_T001","Zm00001d011661","sp|Q9LU14|APG2_ARATH GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1//1.95966e-147",157816116,157817894,"+",2258,"downstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011662_T003","Zm00001d011662",null,157820293,157821176,"+",-250,"antisense"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011662_T001","Zm00001d011662",null,157820250,157821177,"+",-293,"antisense"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011662_T002","Zm00001d011662",null,157820293,157821176,"+",-250,"antisense"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011659_T001","Zm00001d011659","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//1.05242e-12",157731356,157731685,"+",88467,"downstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011660_T002","Zm00001d011660","sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2//1.55443e-20",157761148,157769182,"+",50970,"downstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011660_T003","Zm00001d011660","sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2//1.55443e-20",157761148,157769182,"+",50970,"downstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011660_T001","Zm00001d011660","sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2//1.55443e-20",157761148,157769154,"+",50998,"downstream"]
["chr8","LNC_005611","XLOC_056059","lncRNA",157820153,157820542,"-","Zm00001d011660_T006","Zm00001d011660","sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2//1.55443e-20",157761159,157769182,"+",50970,"downstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011677_T001","Zm00001d011677",null,158310725,158310796,"+",74368,"downstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011676_T004","Zm00001d011676","sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2 OS=Arabidopsis thaliana GN=AP1M2 PE=1 SV=1//0",158312192,158313594,"+",71570,"downstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011678_T001","Zm00001d011678",null,158327736,158331518,"-",53646,"upstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011676_T001","Zm00001d011676","sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2 OS=Arabidopsis thaliana GN=AP1M2 PE=1 SV=1//0",158309275,158313754,"+",71410,"downstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011676_T003","Zm00001d011676","sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2 OS=Arabidopsis thaliana GN=AP1M2 PE=1 SV=1//0",158309329,158311010,"+",74154,"downstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011676_T002","Zm00001d011676","sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2 OS=Arabidopsis thaliana GN=AP1M2 PE=1 SV=1//0",158309275,158313766,"+",71398,"downstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011678_T002","Zm00001d011678",null,158330507,158331518,"-",53646,"upstream"]
["chr8","LNC_005612","XLOC_056066","lncRNA",158385165,158385429,"-","Zm00001d011679_T001","Zm00001d011679","sp|Q94JG1|NRT23_ORYSJ High-affinity nitrate transporter 2.3 OS=Oryza sativa subsp. japonica GN=NRT2.3 PE=1 SV=1//0",158415720,158417282,"+",30290,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011703_T001","Zm00001d011703","sp|Q6TEP1|F91A1_DANRE Protein FAM91A1 OS=Danio rerio GN=fam91a1 PE=2 SV=2//2.28777e-17",159239129,159240173,"+",694,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T007","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172399,159180670,"-",60197,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T006","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172398,159180703,"-",60164,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T003","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172370,159181013,"-",59854,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T002","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172370,159181013,"-",59854,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T001","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172370,159180776,"-",60091,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T001","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159247250,159252699,"+",6164,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T002","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159247251,159252702,"+",6165,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T003","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159247274,159252648,"+",6188,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T004","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159247274,159252654,"+",6188,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T005","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159247300,159252677,"+",6214,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T009","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172500,159180776,"-",60091,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T008","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172469,159180776,"-",60091,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011701_T002","Zm00001d011701",null,159182506,159185792,"+",55075,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011704_T001","Zm00001d011704","sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis thaliana GN=ULP1B PE=5 SV=2//1.40767e-07",159242817,159245870,"+",1731,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011707_T001","Zm00001d011707","sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1//4.22875e-71",159315622,159317923,"+",74536,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T006","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159247300,159252693,"+",6214,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T008","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159250247,159252679,"+",9161,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T007","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159247314,159252692,"+",6228,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011701_T003","Zm00001d011701",null,159182506,159185792,"+",55075,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011701_T004","Zm00001d011701",null,159182506,159185792,"+",55075,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T014","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172552,159180776,"-",60091,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T015","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172579,159180481,"-",60386,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T010","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172521,159180656,"-",60211,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T011","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172522,159180703,"-",60164,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T012","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172534,159175569,"-",65298,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011700_T013","Zm00001d011700","sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1//1.04614e-175",159172534,159179366,"-",61501,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T009","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159250768,159252653,"+",9682,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011705_T010","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",159251513,159252701,"+",10427,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T011","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159171078,159171802,"+",69065,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011701_T001","Zm00001d011701",null,159182506,159185792,"+",55075,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T002","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159166693,159171801,"+",69066,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T003","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159166711,159171850,"+",69017,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T001","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159166693,159171801,"+",69066,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T006","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159166757,159171754,"+",69113,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T007","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159167352,159171672,"+",69195,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T004","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159166722,159171802,"+",69065,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T005","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159166742,159171685,"+",69182,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T008","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159167352,159171802,"+",69065,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011699_T009","Zm00001d011699","sp|Q24WI0|SURE_DESHY 5&apos;-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1//1.39319e-17",159167352,159171802,"+",69065,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011702_T001","Zm00001d011702","sp|Q0R4F1|PIF1_XENLA ATP-dependent DNA helicase PIF1 OS=Xenopus laevis GN=pif1 PE=2 SV=1//1.34631e-19",159221976,159237512,"+",3355,"downstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011706_T003","Zm00001d011706","sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=2 SV=2//3.10487e-15",159306374,159314076,"+",65288,"upstream"]
["chr8","LNC_005613","XLOC_056078","lncRNA",159240868,159241085,"-","Zm00001d011706_T002","Zm00001d011706","sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=2 SV=2//3.10487e-15",159306374,159314076,"+",65288,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031457_T009","Zm00001d031457","sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1//2.9015e-16",190910750,190941915,"+",21076,"downstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031460_T001","Zm00001d031460","sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2//6.59227e-58",191032599,191034959,"+",69367,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031457_T001","Zm00001d031457","sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1//2.9015e-16",190910668,190936329,"+",26662,"downstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031457_T002","Zm00001d031457","sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1//2.9015e-16",190910668,190943061,"+",19930,"downstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031457_T003","Zm00001d031457","sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1//2.9015e-16",190910703,190943061,"+",19930,"downstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031457_T004","Zm00001d031457","sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1//2.9015e-16",190910746,190942002,"+",20989,"downstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031462_T001","Zm00001d031462","sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1//3.4761e-52",191059764,191062054,"+",96532,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031462_T002","Zm00001d031462","sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1//3.4761e-52",191059765,191062054,"+",96533,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031459_T001","Zm00001d031459","sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1//5.57498e-52",190964811,190978369,"+",1579,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031462_T003","Zm00001d031462","sp|Q5W7F2|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1//3.4761e-52",191059765,191062054,"+",96533,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031458_T005","Zm00001d031458",null,190927336,190930337,"-",32654,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031458_T004","Zm00001d031458",null,190927322,190929783,"-",33208,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031458_T001","Zm00001d031458",null,190927319,190930077,"-",32914,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031458_T003","Zm00001d031458",null,190927319,190930337,"-",32654,"upstream"]
["chr1","LNC_000258","XLOC_002583","lncRNA",190962992,190963231,"+","Zm00001d031458_T002","Zm00001d031458",null,190927319,190930077,"-",32914,"upstream"]
["chr1","LNC_000578","XLOC_006330","lncRNA",113466559,113466803,"-","Zm00001d030212_T001","Zm00001d030212","sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3//1.44076e-15",113399321,113402153,"+",64405,"downstream"]
["chr1","LNC_000578","XLOC_006330","lncRNA",113466559,113466803,"-","Zm00001d030213_T001","Zm00001d030213","sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2//3.04079e-145",113434606,113438057,"+",28501,"downstream"]
["chr1","LNC_000578","XLOC_006330","lncRNA",113466559,113466803,"-","Zm00001d030214_T001","Zm00001d030214","sp|Q8GT20|BEBT_TOBAC Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1//1.59222e-101",113477268,113478896,"+",10464,"upstream"]
["chr1","LNC_000579","XLOC_006331","lncRNA",113470032,113470625,"-","Zm00001d030212_T001","Zm00001d030212","sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3//1.44076e-15",113399321,113402153,"+",67878,"downstream"]
["chr1","LNC_000579","XLOC_006331","lncRNA",113470032,113470625,"-","Zm00001d030213_T001","Zm00001d030213","sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2//3.04079e-145",113434606,113438057,"+",31974,"downstream"]
["chr1","LNC_000579","XLOC_006331","lncRNA",113470032,113470625,"-","Zm00001d030214_T001","Zm00001d030214","sp|Q8GT20|BEBT_TOBAC Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1//1.59222e-101",113477268,113478896,"+",6642,"upstream"]
["chr2","LNC_001625","XLOC_015686","lncRNA",167772383,167772719,"+","Zm00001d005289_T001","Zm00001d005289","sp|Q00531|JI60_HORVU 60 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1//2.58839e-19",167772075,167772904,"-",-337,"antisense"]
["chr2","LNC_001625","XLOC_015686","lncRNA",167772383,167772719,"+","Zm00001d005288_T001","Zm00001d005288","sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2//1.22582e-86",167728803,167729710,"-",42672,"upstream"]
["chr2","LNC_001625","XLOC_015686","lncRNA",167772383,167772719,"+","Zm00001d005287_T001","Zm00001d005287",null,167711989,167715071,"-",57311,"upstream"]
["chr2","LNC_001625","XLOC_015686","lncRNA",167772383,167772719,"+","Zm00001d005286_T001","Zm00001d005286","sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1//5.09485e-58",167709555,167710604,"-",61778,"upstream"]
["chr2","LNC_001625","XLOC_015686","lncRNA",167772383,167772719,"+","Zm00001d005285_T001","Zm00001d005285","sp|Q9LHP2|SL30A_ARATH Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana GN=SCL30A PE=1 SV=1//4.76469e-17",167705486,167706958,"-",65424,"upstream"]
["chr2","LNC_001624","XLOC_015653","lncRNA",163496330,163501153,"+","Zm00001d005205_T003","Zm00001d005205","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.2517e-159",163509103,163514363,"-",7949,"downstream"]
["chr2","LNC_001624","XLOC_015653","lncRNA",163496330,163501153,"+","Zm00001d005205_T001","Zm00001d005205","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.2517e-159",163509070,163514363,"-",7916,"downstream"]
["chr2","LNC_001624","XLOC_015653","lncRNA",163496330,163501153,"+","Zm00001d005205_T002","Zm00001d005205","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.2517e-159",163509075,163514289,"-",7921,"downstream"]
["chr2","LNC_001624","XLOC_015653","lncRNA",163496330,163501153,"+","Zm00001d005203_T001","Zm00001d005203","sp|Q9FK12|CRF3_ARATH Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1//5.62918e-12",163456179,163457054,"+",39275,"downstream"]
["chr2","LNC_001627","XLOC_015711","lncRNA",169474370,169474890,"+","Zm00001d005315_T001","Zm00001d005315",null,169380169,169381164,"+",93205,"downstream"]
["chr2","LNC_001627","XLOC_015711","lncRNA",169474370,169474890,"+","Zm00001d005317_T001","Zm00001d005317","sp|Q9SJM1|ACR10_ARATH ACT domain-containing protein ACR10 OS=Arabidopsis thaliana GN=ACR10 PE=2 SV=1//1.79426e-142",169450468,169452918,"+",21451,"downstream"]
["chr2","LNC_001626","XLOC_015696","lncRNA",168428978,168429219,"+","Zm00001d005300_T001","Zm00001d005300","sp|Q9FDW1|MYB44_ARATH Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1//3.43701e-55",168527945,168528802,"+",98725,"upstream"]
["chr2","LNC_001626","XLOC_015696","lncRNA",168428978,168429219,"+","Zm00001d005298_T001","Zm00001d005298","sp|Q94C77|RPKL_ARATH Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1//5.58924e-140",168386230,168389148,"+",39829,"downstream"]
["chr2","LNC_001626","XLOC_015696","lncRNA",168428978,168429219,"+","Zm00001d005299_T001","Zm00001d005299","sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2//5.13265e-56",168472380,168476285,"-",43160,"downstream"]
["chr2","LNC_001626","XLOC_015696","lncRNA",168428978,168429219,"+","Zm00001d000967_T001","Zm00001d000967",null,168528778,168529570,"+",99558,"upstream"]
["chr2","LNC_001626","XLOC_015696","lncRNA",168428978,168429219,"+","Zm00001d000966_T001","Zm00001d000966",null,168429790,168430049,"+",570,"upstream"]
["chr2","LNC_001621","XLOC_015643","lncRNA",162805857,162806164,"+","Zm00001d005179_T001","Zm00001d005179","sp|Q8L773|THO4A_ARATH THO complex subunit 4A OS=Arabidopsis thaliana GN=ALY1 PE=1 SV=1//1.94574e-31",162701249,162708553,"+",97303,"downstream"]
["chr2","LNC_001621","XLOC_015643","lncRNA",162805857,162806164,"+","Zm00001d005181_T001","Zm00001d005181",null,162854577,162854647,"+",48412,"upstream"]
["chr2","LNC_001621","XLOC_015643","lncRNA",162805857,162806164,"+","Zm00001d005182_T001","Zm00001d005182","sp|Q9SKI2|VPS2A_ARATH Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana GN=VPS2.1 PE=1 SV=2//3.24604e-117",162854863,162858098,"-",48698,"downstream"]
["chr2","LNC_001621","XLOC_015643","lncRNA",162805857,162806164,"+","Zm00001d005183_T001","Zm00001d005183",null,162878151,162878838,"-",71986,"downstream"]
["chr2","LNC_001621","XLOC_015643","lncRNA",162805857,162806164,"+","Zm00001d005184_T001","Zm00001d005184","sp|O48956|C98A1_SORBI Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1//1.00906e-52",162902441,162909949,"-",96276,"downstream"]
["chr2","LNC_001621","XLOC_015643","lncRNA",162805857,162806164,"+","Zm00001d005180_T001","Zm00001d005180",null,162802813,162802885,"+",2971,"downstream"]
["chr2","LNC_001620","XLOC_015640","lncRNA",162648235,162648664,"+","Zm00001d005179_T001","Zm00001d005179","sp|Q8L773|THO4A_ARATH THO complex subunit 4A OS=Arabidopsis thaliana GN=ALY1 PE=1 SV=1//1.94574e-31",162701249,162708553,"+",52584,"upstream"]
["chr2","LNC_001623","XLOC_015653","lncRNA",163496330,163499972,"+","Zm00001d005205_T003","Zm00001d005205","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.2517e-159",163509103,163514363,"-",9130,"downstream"]
["chr2","LNC_001623","XLOC_015653","lncRNA",163496330,163499972,"+","Zm00001d005205_T001","Zm00001d005205","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.2517e-159",163509070,163514363,"-",9097,"downstream"]
["chr2","LNC_001623","XLOC_015653","lncRNA",163496330,163499972,"+","Zm00001d005205_T002","Zm00001d005205","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.2517e-159",163509075,163514289,"-",9102,"downstream"]
["chr2","LNC_001623","XLOC_015653","lncRNA",163496330,163499972,"+","Zm00001d005203_T001","Zm00001d005203","sp|Q9FK12|CRF3_ARATH Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1//5.62918e-12",163456179,163457054,"+",39275,"downstream"]
["chr2","LNC_001622","XLOC_015644","lncRNA",162806842,162807098,"+","Zm00001d005179_T001","Zm00001d005179","sp|Q8L773|THO4A_ARATH THO complex subunit 4A OS=Arabidopsis thaliana GN=ALY1 PE=1 SV=1//1.94574e-31",162701249,162708553,"+",98288,"downstream"]
["chr2","LNC_001622","XLOC_015644","lncRNA",162806842,162807098,"+","Zm00001d005181_T001","Zm00001d005181",null,162854577,162854647,"+",47478,"upstream"]
["chr2","LNC_001622","XLOC_015644","lncRNA",162806842,162807098,"+","Zm00001d005182_T001","Zm00001d005182","sp|Q9SKI2|VPS2A_ARATH Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana GN=VPS2.1 PE=1 SV=2//3.24604e-117",162854863,162858098,"-",47764,"downstream"]
["chr2","LNC_001622","XLOC_015644","lncRNA",162806842,162807098,"+","Zm00001d005183_T001","Zm00001d005183",null,162878151,162878838,"-",71052,"downstream"]
["chr2","LNC_001622","XLOC_015644","lncRNA",162806842,162807098,"+","Zm00001d005184_T001","Zm00001d005184","sp|O48956|C98A1_SORBI Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1//1.00906e-52",162902441,162909949,"-",95342,"downstream"]
["chr2","LNC_001622","XLOC_015644","lncRNA",162806842,162807098,"+","Zm00001d005180_T001","Zm00001d005180",null,162802813,162802885,"+",3956,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T003","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153399,172161466,"-",50823,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005392_T003","Zm00001d005392","sp|Q10PI6|LCAT1_ORYSJ Lecithin-cholesterol acyltransferase-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0232800 PE=2 SV=1//2.0083e-78",172065693,172067261,"+",34990,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005392_T002","Zm00001d005392","sp|Q10PI6|LCAT1_ORYSJ Lecithin-cholesterol acyltransferase-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0232800 PE=2 SV=1//2.0083e-78",172065236,172067442,"+",34809,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005392_T001","Zm00001d005392","sp|Q10PI6|LCAT1_ORYSJ Lecithin-cholesterol acyltransferase-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0232800 PE=2 SV=1//2.0083e-78",172065137,172067442,"+",34809,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005391_T002","Zm00001d005391","sp|Q9FJ47|SAG12_ARATH Senescence-specific cysteine protease SAG12 OS=Arabidopsis thaliana GN=SAG12 PE=1 SV=1//5.74235e-78",172032934,172034444,"-",67807,"upstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005392_T004","Zm00001d005392","sp|Q10PI6|LCAT1_ORYSJ Lecithin-cholesterol acyltransferase-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0232800 PE=2 SV=1//2.0083e-78",172065693,172067314,"+",34937,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T008","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153503,172161490,"-",50927,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T009","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153504,172161445,"-",50928,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005394_T001","Zm00001d005394",null,172200289,172201842,"+",97713,"upstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T001","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153302,172161420,"-",50726,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T002","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153302,172161498,"-",50726,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005391_T001","Zm00001d005391","sp|Q9FJ47|SAG12_ARATH Senescence-specific cysteine protease SAG12 OS=Arabidopsis thaliana GN=SAG12 PE=1 SV=1//5.74235e-78",172032915,172034435,"-",67816,"upstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T004","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153401,172161466,"-",50825,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T005","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153410,172161476,"-",50834,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T006","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153445,172161455,"-",50869,"downstream"]
["chr2","LNC_001629","XLOC_015749","lncRNA",172102252,172102575,"+","Zm00001d005393_T007","Zm00001d005393","sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1//3.79436e-20",172153455,172161481,"-",50879,"downstream"]
["chr2","LNC_001628","XLOC_015720","lncRNA",169903078,169903294,"+","Zm00001d005337_T001","Zm00001d005337","sp|O34598|GUAD_BACSU Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1//1.53372e-28",169965148,169969026,"+",61853,"upstream"]
["chr2","LNC_001628","XLOC_015720","lncRNA",169903078,169903294,"+","Zm00001d005336_T001","Zm00001d005336",null,169842871,169842941,"+",60136,"downstream"]
["chr2","LNC_001628","XLOC_015720","lncRNA",169903078,169903294,"+","Zm00001d005334_T001","Zm00001d005334","sp|P0CH35|RL40B_ORYSJ Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica GN=Ub-CEP52-2 PE=3 SV=1//4.02038e-86",169838654,169842673,"-",60404,"upstream"]
["chr1","LNC_000572","XLOC_006250","lncRNA",105549634,105551597,"-","Zm00001d030095_T001","Zm00001d030095","sp|Q9LFE4|Y5673_ARATH WEB family protein At5g16730, chloroplastic OS=Arabidopsis thaliana GN=At5g16730 PE=1 SV=1//3.79455e-52",105495065,105498733,"+",50900,"downstream"]
["chr1","LNC_000572","XLOC_006250","lncRNA",105549634,105551597,"-","Zm00001d030096_T002","Zm00001d030096",null,105529115,105532226,"+",17407,"downstream"]
["chr1","LNC_000572","XLOC_006250","lncRNA",105549634,105551597,"-","Zm00001d030098_T001","Zm00001d030098",null,105553409,105554335,"-",1811,"downstream"]
["chr1","LNC_000572","XLOC_006250","lncRNA",105549634,105551597,"-","Zm00001d030099_T001","Zm00001d030099",null,105647014,105648033,"+",95416,"upstream"]
["chr1","LNC_000572","XLOC_006250","lncRNA",105549634,105551597,"-","Zm00001d030096_T001","Zm00001d030096",null,105529115,105532226,"+",17407,"downstream"]
["chr1","LNC_000573","XLOC_006276","lncRNA",107385671,107385900,"-","Zm00001d030123_T001","Zm00001d030123","sp|Q3EDA9|PPR46_ARATH Putative pentatricopeptide repeat-containing protein At1g16830 OS=Arabidopsis thaliana GN=At1g16830 PE=3 SV=2//3.90168e-08",107336969,107338846,"-",46824,"upstream"]
["chr1","LNC_000573","XLOC_006276","lncRNA",107385671,107385900,"-","Zm00001d030124_T001","Zm00001d030124",null,107460666,107465036,"+",74765,"upstream"]
["chr1","LNC_000573","XLOC_006276","lncRNA",107385671,107385900,"-","Zm00001d030124_T002","Zm00001d030124",null,107460666,107465036,"+",74765,"upstream"]
["chr1","LNC_000570","XLOC_006245","lncRNA",104833209,104833471,"-","Zm00001d022786_T001","Zm00001d022786",null,104756234,104756542,"+",76666,"downstream"]
["chr1","LNC_000570","XLOC_006245","lncRNA",104833209,104833471,"-","Zm00001d030088_T001","Zm00001d030088",null,104831289,104831774,"-",1434,"upstream"]
["chr1","LNC_000570","XLOC_006245","lncRNA",104833209,104833471,"-","Zm00001d030090_T001","Zm00001d030090","sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1//8.42013e-24",104849146,104852816,"+",15674,"upstream"]
["chr1","LNC_000571","XLOC_006247","lncRNA",105047112,105047371,"-","Zm00001d030093_T001","Zm00001d030093",null,105073056,105073732,"+",25684,"upstream"]
["chr1","LNC_000571","XLOC_006247","lncRNA",105047112,105047371,"-","Zm00001d030091_T001","Zm00001d030091",null,105035216,105041237,"-",5874,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019679_T001","Zm00001d019679",null,50548147,50551386,"-",97451,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019684_T002","Zm00001d019684","sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1//2.83937e-75",50704976,50707942,"+",49431,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019684_T003","Zm00001d019684","sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1//2.83937e-75",50705477,50707942,"+",49932,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019684_T001","Zm00001d019684","sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1//2.83937e-75",50704976,50707722,"+",49431,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019680_T001","Zm00001d019680",null,50560567,50563730,"-",85107,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019682_T001","Zm00001d019682",null,50686071,50686142,"-",30526,"downstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019681_T003","Zm00001d019681","sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1//2.67029e-22",50682642,50688689,"+",27097,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019681_T002","Zm00001d019681","sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1//2.67029e-22",50682569,50688689,"+",27024,"upstream"]
["chr7","LNC_004909","XLOC_049319","lncRNA",50648838,50655544,"-","Zm00001d019681_T001","Zm00001d019681","sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1//2.67029e-22",50682569,50688689,"+",27024,"upstream"]
["chr7","LNC_004908","XLOC_049273","lncRNA",48144427,48144780,"-","Zm00001d019650_T001","Zm00001d019650","sp|Q5XVA8|Y3905_ARATH Uncharacterized protein At3g49055 OS=Arabidopsis thaliana GN=At3g49055 PE=2 SV=1//2.41519e-11",48185296,48195340,"-",40515,"downstream"]
["chr7","LNC_004907","XLOC_049225","lncRNA",43355142,43355394,"-","Zm00001d019568_T003","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298738,43321446,"-",33695,"upstream"]
["chr7","LNC_004907","XLOC_049225","lncRNA",43355142,43355394,"-","Zm00001d019568_T001","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298735,43322873,"-",32268,"upstream"]
["chr7","LNC_004907","XLOC_049225","lncRNA",43355142,43355394,"-","Zm00001d019567_T001","Zm00001d019567",null,43293292,43296381,"-",58760,"upstream"]
["chr7","LNC_004907","XLOC_049225","lncRNA",43355142,43355394,"-","Zm00001d019570_T001","Zm00001d019570",null,43390237,43390767,"+",34842,"upstream"]
["chr7","LNC_004907","XLOC_049225","lncRNA",43355142,43355394,"-","Zm00001d019568_T004","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298874,43322873,"-",32268,"upstream"]
["chr7","LNC_004906","XLOC_049224","lncRNA",43354006,43354590,"-","Zm00001d019568_T003","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298738,43321446,"-",32559,"upstream"]
["chr7","LNC_004906","XLOC_049224","lncRNA",43354006,43354590,"-","Zm00001d019568_T001","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298735,43322873,"-",31132,"upstream"]
["chr7","LNC_004906","XLOC_049224","lncRNA",43354006,43354590,"-","Zm00001d019567_T001","Zm00001d019567",null,43293292,43296381,"-",57624,"upstream"]
["chr7","LNC_004906","XLOC_049224","lncRNA",43354006,43354590,"-","Zm00001d019570_T001","Zm00001d019570",null,43390237,43390767,"+",35646,"upstream"]
["chr7","LNC_004906","XLOC_049224","lncRNA",43354006,43354590,"-","Zm00001d019568_T004","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298874,43322873,"-",31132,"upstream"]
["chr7","LNC_004905","XLOC_049223","lncRNA",43352669,43353064,"-","Zm00001d019568_T003","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298738,43321446,"-",31222,"upstream"]
["chr7","LNC_004905","XLOC_049223","lncRNA",43352669,43353064,"-","Zm00001d019568_T001","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298735,43322873,"-",29795,"upstream"]
["chr7","LNC_004905","XLOC_049223","lncRNA",43352669,43353064,"-","Zm00001d019567_T001","Zm00001d019567",null,43293292,43296381,"-",56287,"upstream"]
["chr7","LNC_004905","XLOC_049223","lncRNA",43352669,43353064,"-","Zm00001d019570_T001","Zm00001d019570",null,43390237,43390767,"+",37172,"upstream"]
["chr7","LNC_004905","XLOC_049223","lncRNA",43352669,43353064,"-","Zm00001d019568_T004","Zm00001d019568","sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1//1.65916e-10",43298874,43322873,"-",29795,"upstream"]
["chr7","LNC_004904","XLOC_049221","lncRNA",43130959,43131538,"-","Zm00001d001136_T001","Zm00001d001136",null,43216840,43217379,"+",85301,"upstream"]
["chr7","LNC_004904","XLOC_049221","lncRNA",43130959,43131538,"-","Zm00001d019565_T001","Zm00001d019565","sp|Q9ATM5|PIP26_MAIZE Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1//0",43071903,43073370,"-",57588,"upstream"]
["chr7","LNC_004904","XLOC_049221","lncRNA",43130959,43131538,"-","Zm00001d019565_T002","Zm00001d019565","sp|Q9ATM5|PIP26_MAIZE Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1//0",43071905,43073365,"-",57593,"upstream"]
["chr7","LNC_004904","XLOC_049221","lncRNA",43130959,43131538,"-","Zm00001d019565_T003","Zm00001d019565","sp|Q9ATM5|PIP26_MAIZE Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1//0",43071907,43073370,"-",57588,"upstream"]
["chr7","LNC_004903","XLOC_049212","lncRNA",42537278,42537696,"-","Zm00001d019560_T001","Zm00001d019560","sp|Q6H676|EXB11_ORYSJ Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1//3.32572e-119",42572171,42573747,"-",34474,"downstream"]
["chr7","LNC_004903","XLOC_049212","lncRNA",42537278,42537696,"-","Zm00001d019557_T001","Zm00001d019557","sp|Q6H676|EXB11_ORYSJ Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1//6.57142e-97",42523000,42523997,"-",13280,"upstream"]
["chr7","LNC_004902","XLOC_049208","lncRNA",42231069,42245079,"-","Zm00001d001135_T001","Zm00001d001135",null,42259723,42260677,"-",14643,"downstream"]
["chr7","LNC_004902","XLOC_049208","lncRNA",42231069,42245079,"-","Zm00001d019554_T001","Zm00001d019554",null,42137497,42138443,"+",92625,"downstream"]
["chr7","LNC_004902","XLOC_049208","lncRNA",42231069,42245079,"-","Zm00001d019555_T001","Zm00001d019555","sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1//6.98244e-33",42144201,42146030,"+",85038,"downstream"]
["chr7","LNC_004902","XLOC_049208","lncRNA",42231069,42245079,"-","Zm00001d019555_T002","Zm00001d019555","sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1//6.98244e-33",42144240,42146004,"+",85064,"downstream"]
["chr7","LNC_004901","XLOC_049208","lncRNA",42231069,42245075,"-","Zm00001d001135_T001","Zm00001d001135",null,42259723,42260677,"-",14647,"downstream"]
["chr7","LNC_004901","XLOC_049208","lncRNA",42231069,42245075,"-","Zm00001d019554_T001","Zm00001d019554",null,42137497,42138443,"+",92625,"downstream"]
["chr7","LNC_004901","XLOC_049208","lncRNA",42231069,42245075,"-","Zm00001d019555_T001","Zm00001d019555","sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1//6.98244e-33",42144201,42146030,"+",85038,"downstream"]
["chr7","LNC_004901","XLOC_049208","lncRNA",42231069,42245075,"-","Zm00001d019555_T002","Zm00001d019555","sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1//6.98244e-33",42144240,42146004,"+",85064,"downstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019554_T001","Zm00001d019554",null,42137497,42138443,"+",36980,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T008","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052636,42053712,"-",42766,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T006","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052611,42054002,"-",42476,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T007","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052619,42055686,"-",40792,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T004","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052543,42055684,"-",40794,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T005","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052553,42054834,"-",41644,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T002","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052540,42055686,"-",40792,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T003","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052542,42055684,"-",40794,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019552_T001","Zm00001d019552","sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1//2.13043e-09",42052425,42054785,"-",41693,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d001134_T001","Zm00001d001134",null,42097623,42097855,"+",-233,"antisense"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019555_T002","Zm00001d019555","sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1//6.98244e-33",42144240,42146004,"+",43723,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019555_T001","Zm00001d019555","sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1//6.98244e-33",42144201,42146030,"+",43684,"upstream"]
["chr7","LNC_004900","XLOC_049207","lncRNA",42096479,42100516,"-","Zm00001d019553_T001","Zm00001d019553","sp|Q9FLM8|NRPBC_ARATH DNA-directed RNA polymerases II, IV and V subunit 12 OS=Arabidopsis thaliana GN=NRPB12 PE=1 SV=1//1.49594e-22",42065295,42067291,"-",29187,"upstream"]
["chr1","LNC_000574","XLOC_006279","lncRNA",107798061,107798390,"-","Zm00001d030129_T001","Zm00001d030129",null,107865921,107867117,"-",67530,"downstream"]
["chr1","LNC_000574","XLOC_006279","lncRNA",107798061,107798390,"-","Zm00001d030127_T001","Zm00001d030127","sp|Q9FVQ4|PLGG1_ARATH Plastidal glycolate/glycerate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PLGG1 PE=2 SV=1//0",107762967,107765646,"-",32414,"upstream"]
["chr1","LNC_000575","XLOC_006280","lncRNA",107805390,107806216,"-","Zm00001d030129_T001","Zm00001d030129",null,107865921,107867117,"-",59704,"downstream"]
["chr1","LNC_000575","XLOC_006280","lncRNA",107805390,107806216,"-","Zm00001d030127_T001","Zm00001d030127","sp|Q9FVQ4|PLGG1_ARATH Plastidal glycolate/glycerate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PLGG1 PE=2 SV=1//0",107762967,107765646,"-",39743,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021903_T001","Zm00001d021903","sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1//3.81955e-148",165716406,165721222,"+",14654,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021903_T003","Zm00001d021903","sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1//3.81955e-148",165716409,165721222,"+",14654,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021903_T002","Zm00001d021903","sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1//3.81955e-148",165716406,165721222,"+",14654,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021903_T005","Zm00001d021903","sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1//3.81955e-148",165717187,165721222,"+",14654,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021903_T004","Zm00001d021903","sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1//3.81955e-148",165717187,165721164,"+",14712,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021907_T004","Zm00001d021907","sp|Q8LNU5|NOC2L_ORYSJ Nucleolar complex protein 2 homolog OS=Oryza sativa subsp. japonica GN=Os10g0495500 PE=2 SV=1//4.62391e-20",165743974,165745167,"-",5689,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021907_T001","Zm00001d021907","sp|Q8LNU5|NOC2L_ORYSJ Nucleolar complex protein 2 homolog OS=Oryza sativa subsp. japonica GN=Os10g0495500 PE=2 SV=1//4.62391e-20",165743128,165744554,"-",4843,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021907_T003","Zm00001d021907","sp|Q8LNU5|NOC2L_ORYSJ Nucleolar complex protein 2 homolog OS=Oryza sativa subsp. japonica GN=Os10g0495500 PE=2 SV=1//4.62391e-20",165743131,165745215,"-",4846,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021907_T002","Zm00001d021907","sp|Q8LNU5|NOC2L_ORYSJ Nucleolar complex protein 2 homolog OS=Oryza sativa subsp. japonica GN=Os10g0495500 PE=2 SV=1//4.62391e-20",165743128,165745204,"-",4843,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021913_T001","Zm00001d021913","sp|Q8VXX9|BETL1_ARATH Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600 PE=2 SV=1//8.40928e-26",165808704,165811310,"-",70419,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021913_T002","Zm00001d021913","sp|Q8VXX9|BETL1_ARATH Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600 PE=2 SV=1//8.40928e-26",165808716,165811269,"-",70431,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021913_T003","Zm00001d021913","sp|Q8VXX9|BETL1_ARATH Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600 PE=2 SV=1//8.40928e-26",165808801,165810377,"-",70516,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021913_T004","Zm00001d021913","sp|Q8VXX9|BETL1_ARATH Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600 PE=2 SV=1//8.40928e-26",165808801,165811207,"-",70516,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021904_T001","Zm00001d021904","sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1//1.0736e-62",165726475,165732380,"+",3496,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021904_T002","Zm00001d021904","sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1//1.0736e-62",165726664,165732380,"+",3496,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021912_T001","Zm00001d021912","sp|O65351|SBT17_ARATH Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1//2.63233e-171",165799213,165801564,"-",60928,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021906_T001","Zm00001d021906","sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1//5.74624e-126",165739934,165741589,"+",1649,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021911_T001","Zm00001d021911",null,165783947,165784397,"+",45662,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021908_T001","Zm00001d021908","sp|Q6ZL94|SUCA_ORYSJ Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1//5.30069e-36",165767637,165773400,"+",29352,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021908_T002","Zm00001d021908","sp|Q6ZL94|SUCA_ORYSJ Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1//5.30069e-36",165767645,165773400,"+",29360,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021908_T003","Zm00001d021908","sp|Q6ZL94|SUCA_ORYSJ Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1//5.30069e-36",165767649,165773400,"+",29364,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021908_T004","Zm00001d021908","sp|Q6ZL94|SUCA_ORYSJ Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1//5.30069e-36",165767741,165773225,"+",29456,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021908_T005","Zm00001d021908","sp|Q6ZL94|SUCA_ORYSJ Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1//5.30069e-36",165767754,165773400,"+",29469,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021910_T001","Zm00001d021910","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.34944e-52",165778362,165798510,"-",40077,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021910_T003","Zm00001d021910","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.34944e-52",165778362,165798510,"-",40077,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021910_T002","Zm00001d021910","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.34944e-52",165778362,165798510,"-",40077,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021910_T004","Zm00001d021910","sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1//1.34944e-52",165778503,165798536,"-",40218,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021909_T001","Zm00001d021909",null,165775781,165777019,"-",37496,"downstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021914_T004","Zm00001d021914",null,165811897,165821813,"+",73612,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021914_T001","Zm00001d021914",null,165811766,165813044,"+",73481,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021914_T003","Zm00001d021914",null,165811896,165821806,"+",73611,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021905_T001","Zm00001d021905",null,165738140,165738580,"+",-145,"antisense"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021914_T002","Zm00001d021914",null,165811896,165821806,"+",73611,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021901_T001","Zm00001d021901","sp|P33679|ZEAM_MAIZE Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2//5.19727e-156",165699754,165700437,"-",35439,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021902_T002","Zm00001d021902","sp|Q9P2S5|WRP73_HUMAN WD repeat-containing protein WRAP73 OS=Homo sapiens GN=WRAP73 PE=2 SV=1//2.40304e-20",165701376,165711849,"-",24027,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021902_T003","Zm00001d021902","sp|Q9P2S5|WRP73_HUMAN WD repeat-containing protein WRAP73 OS=Homo sapiens GN=WRAP73 PE=2 SV=1//2.40304e-20",165701382,165704455,"-",31421,"upstream"]
["chr7","LNC_005058","XLOC_050708","lncRNA",165735877,165738284,"-","Zm00001d021902_T001","Zm00001d021902","sp|Q9P2S5|WRP73_HUMAN WD repeat-containing protein WRAP73 OS=Homo sapiens GN=WRAP73 PE=2 SV=1//2.40304e-20",165701373,165711849,"-",24027,"upstream"]
["chr7","LNC_005059","XLOC_050723","lncRNA",166382829,166383522,"-","Zm00001d021936_T001","Zm00001d021936","sp|Q8VZ80|PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2//0",166383108,166385301,"+",-415,"antisense"]
["chr7","LNC_005059","XLOC_050723","lncRNA",166382829,166383522,"-","Zm00001d021935_T001","Zm00001d021935","sp|Q8VZ80|PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2//0",166376246,166378812,"+",4016,"downstream"]
["chr7","LNC_005059","XLOC_050723","lncRNA",166382829,166383522,"-","Zm00001d021935_T002","Zm00001d021935","sp|Q8VZ80|PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2//0",166377206,166378281,"+",4547,"downstream"]
["chr7","LNC_005059","XLOC_050723","lncRNA",166382829,166383522,"-","Zm00001d021936_T002","Zm00001d021936","sp|Q8VZ80|PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2//0",166383149,166385042,"+",-374,"antisense"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021762_T002","Zm00001d021762","sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1//4.611e-25",162562676,162567920,"-",38221,"upstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021765_T002","Zm00001d021765",null,162692924,162694367,"+",86549,"upstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021765_T001","Zm00001d021765",null,162692924,162694367,"+",86549,"upstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021762_T001","Zm00001d021762","sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1//4.611e-25",162562670,162567938,"-",38203,"upstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d001267_T001","Zm00001d001267",null,162504726,162507076,"+",99065,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021763_T001","Zm00001d021763","sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1//7.91145e-157",162636525,162637839,"-",30150,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021761_T001","Zm00001d021761","sp|Q8GWP0|MYB39_ARATH Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1//3.04296e-66",162527404,162529059,"-",77082,"upstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021764_T001","Zm00001d021764","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//3.6308e-22",162638409,162642922,"-",32034,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021764_T002","Zm00001d021764","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//3.6308e-22",162638409,162642926,"-",32034,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021764_T003","Zm00001d021764","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//3.6308e-22",162638409,162642926,"-",32034,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021764_T004","Zm00001d021764","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//3.6308e-22",162638497,162642913,"-",32122,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021764_T005","Zm00001d021764","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//3.6308e-22",162638504,162642918,"-",32129,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021764_T006","Zm00001d021764","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//3.6308e-22",162638562,162642914,"-",32187,"downstream"]
["chr7","LNC_005052","XLOC_050618","lncRNA",162606142,162606374,"-","Zm00001d021764_T007","Zm00001d021764","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//3.6308e-22",162638606,162640881,"-",32231,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021779_T002","Zm00001d021779","sp|O65416|SKI27_ARATH F-box protein SKIP27 OS=Arabidopsis thaliana GN=SKIP27 PE=1 SV=2//1.80805e-11",162880801,162882539,"-",72119,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T008","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970851,162980368,"-",15963,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021779_T001","Zm00001d021779","sp|O65416|SKI27_ARATH F-box protein SKIP27 OS=Arabidopsis thaliana GN=SKIP27 PE=1 SV=2//1.80805e-11",162880679,162882541,"-",72117,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T021","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980443,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T026","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980608,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T001","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970819,162980364,"-",15931,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T002","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970819,162980614,"-",15931,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T005","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970851,162980026,"-",15963,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T004","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970850,162979446,"-",15962,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T028","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970853,162977601,"-",15965,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021777_T001","Zm00001d021777",null,162864817,162866903,"-",87755,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021777_T002","Zm00001d021777",null,162864817,162867072,"-",87586,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021789_T001","Zm00001d021789","sp|Q42456|ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2//9.43416e-127",163020921,163023246,"-",66033,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T009","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970851,162980509,"-",15963,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021789_T002","Zm00001d021789","sp|Q42456|ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2//9.43416e-127",163020928,163023279,"-",66040,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021781_T001","Zm00001d021781","sp|O64515|OCT2_ARATH Organic cation/carnitine transporter 2 OS=Arabidopsis thaliana GN=OCT2 PE=2 SV=1//9.0799e-159",162910507,162912123,"+",42535,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021776_T001","Zm00001d021776",null,162862428,162862499,"-",92159,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021782_T001","Zm00001d021782","sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana GN=UBP16 PE=1 SV=1//2.57623e-07",162926330,162930411,"-",24247,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T017","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980383,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T041","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162975968,162980364,"-",21080,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T040","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162972173,162976876,"-",17285,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T034","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970853,162980443,"-",15965,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T036","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970854,162978716,"-",15966,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T030","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970853,162980026,"-",15965,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T031","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970853,162980223,"-",15965,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T032","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970853,162980311,"-",15965,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T019","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980443,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T016","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980187,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021778_T001","Zm00001d021778",null,162876923,162877570,"-",77088,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T014","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980080,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T038","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970937,162980443,"-",16049,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T013","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162979960,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021788_T002","Zm00001d021788","sp|O64937|EF1A_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2//0",163000415,163002045,"+",45527,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021788_T001","Zm00001d021788","sp|O64937|EF1A_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2//0",162999143,163002120,"+",44255,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021787_T001","Zm00001d021787","sp|Q8L7L1|SPHK1_ARATH Sphingosine kinase 1 OS=Arabidopsis thaliana GN=SPHK1 PE=1 SV=1//7.55045e-134",162992393,162997471,"+",37505,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021789_T003","Zm00001d021789","sp|Q42456|ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2//9.43416e-127",163021656,163026932,"-",66768,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021783_T001","Zm00001d021783",null,162946050,162946523,"-",8135,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021787_T003","Zm00001d021787","sp|Q8L7L1|SPHK1_ARATH Sphingosine kinase 1 OS=Arabidopsis thaliana GN=SPHK1 PE=1 SV=1//7.55045e-134",162992459,162997476,"+",37571,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021787_T002","Zm00001d021787","sp|Q8L7L1|SPHK1_ARATH Sphingosine kinase 1 OS=Arabidopsis thaliana GN=SPHK1 PE=1 SV=1//7.55045e-134",162992393,162997476,"+",37505,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021785_T027","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",162970852,162980622,"-",15964,"downstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021787_T004","Zm00001d021787","sp|Q8L7L1|SPHK1_ARATH Sphingosine kinase 1 OS=Arabidopsis thaliana GN=SPHK1 PE=1 SV=1//7.55045e-134",162992886,162997446,"+",37998,"upstream"]
["chr7","LNC_005053","XLOC_050635","lncRNA",162954659,162954887,"-","Zm00001d021784_T001","Zm00001d021784","sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1//2.21208e-176",162969080,162970349,"+",14192,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021707_T001","Zm00001d021707","sp|Q6ZL42|H2A2_ORYSJ Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1//3.86132e-44",160896082,160897190,"+",98025,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021700_T001","Zm00001d021700","sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1//9.85908e-18",160735350,160736498,"+",61344,"downstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021704_T002","Zm00001d021704","sp|A0L5U1|RL28_MAGMM 50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=rpmB PE=3 SV=1//1.72658e-06",160762211,160766975,"-",30867,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021704_T003","Zm00001d021704","sp|A0L5U1|RL28_MAGMM 50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=rpmB PE=3 SV=1//1.72658e-06",160763957,160767150,"-",30692,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021704_T001","Zm00001d021704","sp|A0L5U1|RL28_MAGMM 50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=rpmB PE=3 SV=1//1.72658e-06",160762148,160767245,"-",30597,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021701_T005","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737184,160741137,"-",56705,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021701_T004","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737181,160741199,"-",56643,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021701_T007","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737209,160741135,"-",56707,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021701_T006","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737207,160741071,"-",56771,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021701_T001","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737172,160741135,"-",56707,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021701_T003","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737177,160741135,"-",56707,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021701_T002","Zm00001d021701","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//1.99778e-16",160737172,160741135,"-",56707,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021705_T001","Zm00001d021705",null,160792170,160793223,"+",4619,"downstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021706_T001","Zm00001d021706","sp|Q43208|H2A4_WHEAT Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3//5.98369e-45",160893540,160894808,"+",95483,"upstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021705_T002","Zm00001d021705",null,160792181,160793048,"+",4794,"downstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021703_T001","Zm00001d021703","sp|Q41048|PSBQ1_MAIZE Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1//8.66489e-127",160760828,160761969,"+",35873,"downstream"]
["chr7","LNC_005050","XLOC_050580","lncRNA",160797843,160798056,"-","Zm00001d021702_T001","Zm00001d021702","sp|P55005|AMYB_MAIZE Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1//0",160752742,160758067,"+",39775,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021756_T001","Zm00001d021756","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//1.83975e-11",162443428,162443754,"+",36867,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021762_T001","Zm00001d021762","sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1//4.611e-25",162562670,162567938,"-",81469,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021760_T001","Zm00001d021760","sp|P21616|AVP_VIGRR Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna radiata var. radiata PE=1 SV=4//3.28022e-164",162497159,162498832,"+",15958,"upstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021758_T001","Zm00001d021758","sp|Q54NS9|AIFA_DICDI Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum GN=aifA PE=3 SV=1//2.43963e-14",162466094,162467516,"+",13105,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021762_T002","Zm00001d021762","sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1//4.611e-25",162562676,162567920,"-",81475,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021757_T001","Zm00001d021757","sp|Q4R1I9|ANGLT_ROSHC Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1//9.91891e-96",162458730,162460286,"-",20335,"upstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d001267_T001","Zm00001d001267",null,162504726,162507076,"+",23525,"upstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021761_T001","Zm00001d021761","sp|Q8GWP0|MYB39_ARATH Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1//3.04296e-66",162527404,162529059,"-",46203,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021759_T001","Zm00001d021759","sp|Q5ZLR4|ESRP2_CHICK Epithelial splicing regulatory protein 2 OS=Gallus gallus GN=ESRP2 PE=2 SV=1//1.28751e-07",162468271,162470688,"+",9933,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021759_T002","Zm00001d021759","sp|Q5ZLR4|ESRP2_CHICK Epithelial splicing regulatory protein 2 OS=Gallus gallus GN=ESRP2 PE=2 SV=1//1.28751e-07",162468281,162469174,"+",11447,"downstream"]
["chr7","LNC_005051","XLOC_050615","lncRNA",162480622,162481200,"-","Zm00001d021759_T003","Zm00001d021759","sp|Q5ZLR4|ESRP2_CHICK Epithelial splicing regulatory protein 2 OS=Gallus gallus GN=ESRP2 PE=2 SV=1//1.28751e-07",162468940,162470620,"+",10001,"downstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d001270_T001","Zm00001d001270",null,164998280,164998943,"+",34130,"downstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d021869_T001","Zm00001d021869",null,164995427,164996281,"+",36792,"downstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d021871_T003","Zm00001d021871","sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1//0",165007161,165021222,"-",11851,"upstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d021871_T002","Zm00001d021871","sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1//0",165006869,165021222,"-",11851,"upstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d021871_T001","Zm00001d021871","sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1//0",165006869,165009835,"-",23238,"upstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d021867_T001","Zm00001d021867","sp|Q9JKB8|PRP18_RAT Pre-mRNA-splicing factor 18 OS=Rattus norvegicus GN=Prpf18 PE=2 SV=1//5.64268e-50",164948984,164951369,"-",81704,"upstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d021868_T001","Zm00001d021868","sp|Q9SY00|WDR5B_ARATH COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana GN=WDR5B PE=1 SV=1//5.41989e-138",164951419,164954177,"+",78896,"downstream"]
["chr7","LNC_005056","XLOC_050691","lncRNA",165033074,165033333,"-","Zm00001d021870_T001","Zm00001d021870",null,164999373,165000322,"+",32751,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021885_T001","Zm00001d021885","sp|Q2R2W2|14334_ORYSJ 14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=1 SV=1//6.0593e-73",165356591,165357406,"-",14993,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021876_T001","Zm00001d021876",null,165264412,165264765,"+",76451,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021887_T001","Zm00001d021887",null,165376358,165377110,"+",34760,"upstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T001","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165265600,165277445,"+",63771,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T003","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165265716,165277428,"+",63788,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T002","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165265617,165277430,"+",63786,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T005","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165265917,165274252,"+",66964,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T004","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165265827,165277445,"+",63771,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T007","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165266060,165277428,"+",63788,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T006","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165266035,165277397,"+",63819,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T009","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165273748,165277428,"+",63788,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021877_T008","Zm00001d021877","sp|Q9SRW7|APK3_ARATH Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1//2.17845e-14",165272539,165277432,"+",63784,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021878_T004","Zm00001d021878",null,165282358,165287772,"+",53444,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021878_T005","Zm00001d021878",null,165282364,165287696,"+",53520,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021878_T006","Zm00001d021878",null,165282636,165287779,"+",53437,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021878_T007","Zm00001d021878",null,165284615,165287749,"+",53467,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021878_T001","Zm00001d021878",null,165282300,165287779,"+",53437,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021878_T002","Zm00001d021878",null,165282300,165287779,"+",53437,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021878_T003","Zm00001d021878",null,165282300,165287779,"+",53437,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021882_T001","Zm00001d021882",null,165341364,165341498,"+",-135,"antisense"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021886_T001","Zm00001d021886",null,165358497,165358697,"+",16899,"upstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021884_T001","Zm00001d021884",null,165347244,165347315,"+",5646,"upstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021881_T001","Zm00001d021881",null,165331892,165337693,"-",3523,"upstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021875_T003","Zm00001d021875","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",165254269,165257564,"+",83652,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021875_T002","Zm00001d021875","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",165254269,165257564,"+",83652,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021875_T001","Zm00001d021875","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",165254269,165257420,"+",83796,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021875_T007","Zm00001d021875","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",165255340,165257443,"+",83773,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021875_T006","Zm00001d021875","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",165254587,165257418,"+",83798,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021875_T005","Zm00001d021875","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",165254322,165257564,"+",83652,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021875_T004","Zm00001d021875","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",165254317,165257408,"+",83808,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021880_T001","Zm00001d021880","sp|F4JN00|CSTR4_ARATH CMP-sialic acid transporter 4 OS=Arabidopsis thaliana GN=At4g35335 PE=2 SV=1//4.66e-169",165322979,165328364,"-",12852,"upstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021883_T001","Zm00001d021883","sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1//6.45224e-59",165344079,165346378,"-",2481,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021879_T002","Zm00001d021879",null,165318346,165319094,"+",22122,"downstream"]
["chr7","LNC_005057","XLOC_050695","lncRNA",165341217,165341597,"-","Zm00001d021879_T001","Zm00001d021879",null,165315434,165319355,"+",21861,"downstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021835_T007","Zm00001d021835","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//1.14135e-67",164163107,164166709,"-",22463,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021835_T006","Zm00001d021835","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//1.14135e-67",164163098,164166506,"-",22666,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021835_T005","Zm00001d021835","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//1.14135e-67",164163097,164166629,"-",22543,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021835_T004","Zm00001d021835","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//1.14135e-67",164163097,164166504,"-",22668,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021835_T003","Zm00001d021835","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//1.14135e-67",164163097,164165934,"-",23238,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021835_T002","Zm00001d021835","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//1.14135e-67",164162976,164166758,"-",22414,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021835_T001","Zm00001d021835","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//1.14135e-67",164162976,164166758,"-",22414,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021833_T001","Zm00001d021833",null,164112817,164113050,"-",76122,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021834_T001","Zm00001d021834","sp|Q8GZ79|TI201_ARATH Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1//2.19548e-49",164113639,164118063,"-",71109,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021834_T002","Zm00001d021834","sp|Q8GZ79|TI201_ARATH Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1//2.19548e-49",164113993,164118063,"-",71109,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021831_T001","Zm00001d021831","sp|Q84SL2|C3H50_ORYSJ Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1//0",164100462,164102432,"+",86740,"downstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021836_T001","Zm00001d021836","sp|Q8GT95|PGIP1_ORYSJ Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1//2.75213e-178",164171204,164172202,"-",16970,"upstream"]
["chr7","LNC_005054","XLOC_050671","lncRNA",164189173,164189413,"-","Zm00001d021832_T001","Zm00001d021832","sp|Q69T58|ROC8_ORYSJ Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2//1.8582e-26",164111068,164111764,"-",77408,"upstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T002","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834297,164840093,"-",10398,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T003","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834297,164840093,"-",10398,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021866_T001","Zm00001d021866","sp|Q9SY00|WDR5B_ARATH COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana GN=WDR5B PE=1 SV=1//1.80487e-135",164893142,164896331,"+",69243,"upstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T001","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834297,164840093,"-",10398,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T006","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834303,164839975,"-",10404,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T007","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834303,164840093,"-",10404,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T004","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834297,164840178,"-",10398,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T005","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834303,164839456,"-",10404,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021861_T008","Zm00001d021861","sp|F4I8Q7|KMS2_ARATH Vacuole membrane protein KMS2 OS=Arabidopsis thaliana GN=KMS2 PE=1 SV=1//5.71019e-09",164834325,164839456,"-",10426,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021862_T001","Zm00001d021862","sp|Q9M1X2|FAP1_ARATH Fatty-acid-binding protein 1 OS=Arabidopsis thaliana GN=FAP1 PE=1 SV=1//1.53849e-07",164846373,164846768,"-",22474,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021864_T001","Zm00001d021864","sp|Q9JKB8|PRP18_RAT Pre-mRNA-splicing factor 18 OS=Rattus norvegicus GN=Prpf18 PE=2 SV=1//2.30061e-47",164880127,164883291,"-",56228,"downstream"]
["chr7","LNC_005055","XLOC_050685","lncRNA",164823568,164823898,"-","Zm00001d021863_T001","Zm00001d021863","sp|A2PZN8|YAB7_ORYSJ Protein YABBY 7 OS=Oryza sativa subsp. japonica GN=YAB7 PE=2 SV=1//5.55303e-48",164878265,164880033,"+",54366,"upstream"]

{"sheet":"lncRNA_mRNA_co_expression","index":2,"n_rows":583150,"n_cols":8,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["lncRNA_ID","lncRNA_Gene_ID","Status","mRNA_ID","mRNA_Gene_ID","mRNA_Gene_Description","Pearson_correlation","Pvalue"]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d044461_T001","Zm00001d044461",null,-0.953835153941,1.52790180709e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d039451_T004","Zm00001d039451","sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mrnC PE=3 SV=1//8.71969e-07",0.969768038949,1.89048258603E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d018571_T003","Zm00001d018571",null,0.956876642353,1.09229722645E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d025538_T003","Zm00001d025538",null,0.957798815596,9.81928087729e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d001843_T001","Zm00001d001843","sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica GN=TRX-X PE=2 SV=1//2.36156e-65",0.961214677125,6.47596777759e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d039350_T001","Zm00001d039350","sp|Q0VFP5|CWC15_XENTR Protein CWC15 homolog OS=Xenopus tropicalis GN=cwc15 PE=2 SV=1//5.27353e-17",0.953740036242,1.54345811243e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d048536_T002","Zm00001d048536","sp|Q8LF97|ASK21_ARATH SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1//1.08144e-97",0.952432468058,1.77034483961E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d052435_T002","Zm00001d052435","sp|Q94BZ1|ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1//1.78797e-158",0.952677391228,1.72595196268e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d050341_T001","Zm00001d050341",null,0.95762183369,1.00239084588E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d016361_T001","Zm00001d016361","sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1//2.61168e-15",0.952409670407,1.77452259886e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d030496_T001","Zm00001d030496","sp|Q6NKU9|TI223_ARATH Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis thaliana GN=TIM22-3 PE=2 SV=1//1.50955e-41",0.950486497186,2.15619494726e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d024403_T001","Zm00001d024403",null,0.955865941328,1.22434390448e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d028377_T001","Zm00001d028377","sp|Q9LM92|SMD3B_ARATH Small nuclear ribonucleoprotein SmD3b OS=Arabidopsis thaliana GN=SMD3B PE=2 SV=1//9.80305e-57",0.959998804387,7.54117511992e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d022060_T001","Zm00001d022060","sp|Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2//2.35055e-35",0.952762869559,1.71066847821E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d015460_T002","Zm00001d015460","sp|Q9SUM2|RUXF_ARATH Probable small nuclear ribonucleoprotein F OS=Arabidopsis thaliana GN=At4g30220 PE=2 SV=1//1.51684e-43",0.966530716533,3.12680769499e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d014189_T002","Zm00001d014189",null,0.971273532272,1.46809544521E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d007201_T001","Zm00001d007201","sp|Q9ZT50|RHA2A_ARATH E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana GN=RHA2A PE=1 SV=1//2.00843e-10",0.959642390438,7.87842407091e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d034604_T001","Zm00001d034604","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.48178e-173",0.962594305902,5.41588579983e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d017424_T011","Zm00001d017424","sp|Q6H6R9|FTSH7_ORYSJ ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1//3.47586e-47",0.952436550263,1.76959758402E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d018096_T001","Zm00001d018096","sp|Q9SWI6|RK29_MAIZE 50S ribosomal protein L29, chloroplastic OS=Zea mays GN=RPL29 PE=2 SV=1//4.11961e-65",0.966708646744,3.04548728014e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d028820_T001","Zm00001d028820","sp|Q5FWN8|DNJ6A_XENLA DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-a PE=2 SV=1//2.7001e-16",0.962361828454,5.58409485762e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d048943_T001","Zm00001d048943","sp|P73920|TXLA_SYNY3 Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=txlA PE=3 SV=1//1.02027e-12",0.957767794707,9.85490550498e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d002873_T005","Zm00001d002873","sp|Q9FZ89|Y1815_ARATH UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=2 SV=1//5.17335e-14",0.95801421484,9.57472536811E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d038562_T001","Zm00001d038562","sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1//1.25762e-156",-0.951166616493,2.01444543542e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d006593_T012","Zm00001d006593","sp|F4K0A6|MYO2_ARATH Myosin-2 OS=Arabidopsis thaliana GN=VIII-2 PE=2 SV=1//0",0.950687645922,2.11347359547e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d047761_T012","Zm00001d047761","sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1//4.86584e-09",0.970909200764,1.56262502937e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d053003_T002","Zm00001d053003","sp|Q2L4X1|BZW2_MUSMM Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus molossinus GN=Bzw2 PE=2 SV=1//2.87162e-54",0.954446937657,1.43079381854E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d043935_T001","Zm00001d043935","sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2 SV=1//7.61359e-120",-0.95240958232,1.77453875632E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d052148_T001","Zm00001d052148","sp|Q9ZUZ3|SAU32_ARATH Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1//1.13686e-12",0.975233862849,7.03931783974e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d049602_T001","Zm00001d049602",null,0.966300148195,3.23474464992e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d002668_T007","Zm00001d002668","sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1//3.15524e-80",-0.957931346415,9.66823141442e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d002759_T001","Zm00001d002759","sp|Q8L7W2|NUDT8_ARATH Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2//2.7349e-118",0.950612717127,2.12930828702e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d041750_T001","Zm00001d041750","sp|Q9FNR1|RBG3_ARATH Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana GN=RBG3 PE=2 SV=1//1.22837e-17",0.956670642114,1.11824677984e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d010128_T001","Zm00001d010128","sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1//7.06276e-26",0.963238127159,4.97097672358e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d018596_T006","Zm00001d018596",null,0.963669432056,4.68954935329e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d049637_T001","Zm00001d049637",null,0.954867963372,1.3668596297e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d018596_T001","Zm00001d018596",null,0.953972121262,1.50571991808E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d002456_T002","Zm00001d002456","sp|Q9C9G6|AE7_ARATH Protein AE7 OS=Arabidopsis thaliana GN=AE7 PE=1 SV=2//2.61848e-65",0.954868394157,1.36679539597E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d039677_T002","Zm00001d039677",null,0.952856604101,1.69403242234E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d031899_T001","Zm00001d031899","sp|P15719|MDHP_MAIZE Malate dehydrogenase [NADP], chloroplastic OS=Zea mays PE=1 SV=1//0",0.974720465722,7.79308420018e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d010908_T001","Zm00001d010908","sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1//7.33037e-117",0.973074457784,1.06532702215E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d043492_T001","Zm00001d043492","sp|F4IF99|LPXB_ARATH Probable lipid-A-disaccharide synthase, mitochondrial OS=Arabidopsis thaliana GN=LPXB PE=2 SV=1//8.37293e-11",0.967881435501,2.5505847745e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d030010_T001","Zm00001d030010",null,0.95168434834,1.91157978335E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d020519_T002","Zm00001d020519",null,0.962024731781,5.8353497745e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d050935_T001","Zm00001d050935",null,0.957138480751,1.06000635003E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d029741_T001","Zm00001d029741","sp|Q9ZPH9|PMTF_ARATH Probable methyltransferase PMT15 OS=Arabidopsis thaliana GN=At4g00750 PE=2 SV=1//2.50682e-07",0.968011229758,2.50001122915e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d049583_T005","Zm00001d049583","sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2//2.58664e-85",0.957631068757,1.00131477887e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d019249_T003","Zm00001d019249","sp|Q9FGP9|RER1_ARATH Protein RETICULATA-RELATED 1 OS=Arabidopsis thaliana GN=RER1 PE=2 SV=1//3.72668e-18",0.950494523177,2.15447732188E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d007940_T002","Zm00001d007940","sp|P56333|IF5A1_SOLTU Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1//2.00172e-97",0.969767703998,1.89058624755E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d016926_T002","Zm00001d016926","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//3.13791e-165",0.961390748186,6.33218944834E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d000709_T001","Zm00001d000709",null,0.954768152039,1.381807055e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d022387_T020","Zm00001d022387","sp|Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7 OS=Arabidopsis thaliana GN=ROPGAP7 PE=2 SV=1//0",0.959300128586,8.2134525603e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d037778_T001","Zm00001d037778","sp|Q55911|YC52L_SYNY3 Uncharacterized N-acetyltransferase ycf52-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0286 PE=3 SV=1//1.33342e-10",0.965014300964,3.89233116627e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d012812_T002","Zm00001d012812","sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2//8.1297e-87",0.950803523975,2.08916912903e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d048599_T002","Zm00001d048599","sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2//1.50273e-38",0.955659711463,1.25278005569e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d001799_T003","Zm00001d001799","sp|Q14691|PSF1_HUMAN DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1//6.31202e-31",0.968895281958,2.17637260214e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d008379_T001","Zm00001d008379","sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1//1.02318e-12",0.977426405723,4.44471808247e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d033111_T004","Zm00001d033111","sp|Q8H7U8|LOGL3_ORYSJ Probable cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica GN=LOGL3 PE=2 SV=1//2.6539e-06",0.958374242305,9.17678367518e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d011034_T001","Zm00001d011034","sp|Q9FRL8|DHAR2_ARATH Glutathione S-transferase DHAR2 OS=Arabidopsis thaliana GN=DHAR2 PE=1 SV=1//6.93402e-37",0.956456125768,1.14578688426e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d042590_T001","Zm00001d042590","sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1//3.97037e-89",0.960359797141,7.21138724957e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d024676_T001","Zm00001d024676",null,0.956719270194,1.11207750098E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d038766_T001","Zm00001d038766","sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1//7.29612e-47",0.960243893612,7.31599697712e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d006760_T002","Zm00001d006760","sp|P80639|IF5A_MAIZE Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2//9.56357e-113",0.952836928605,1.69751375001E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d046490_T002","Zm00001d046490","sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2//1.73197e-98",0.972589852875,1.16375900916E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d027352_T001","Zm00001d027352","sp|Q9ZPY1|PPOX2_ARATH Pyridoxine/pyridoxamine 5&apos;-phosphate oxidase 2 OS=Arabidopsis thaliana GN=PPOX2 PE=1 SV=2//3.01915e-79",0.963764993087,4.62894536479e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d022477_T001","Zm00001d022477","sp|A3BNA1|FLP5_ORYSJ Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os07g0671000 PE=3 SV=1//2.55497e-50",0.961247166418,6.44924400106e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d014580_T001","Zm00001d014580","sp|Q10F39|AGO11_ORYSJ Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2//4.35416e-34",0.957886150797,9.71953341367e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d003411_T002","Zm00001d003411","sp|O48609|RRP3_HORVU 30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare GN=PSRP3 PE=2 SV=1//6.97897e-56",0.959463013346,8.05262780457e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d045657_T001","Zm00001d045657","sp|Q8VY81|NUD21_ARATH Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1//4.97427e-43",0.968916267152,2.16911768769e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d048515_T003","Zm00001d048515",null,0.951548228185,1.93821149574E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d032313_T001","Zm00001d032313","sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana GN=YLS8 PE=2 SV=1//1.89745e-99",0.964302358902,4.29964162052e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d020214_T001","Zm00001d020214",null,0.953027903022,1.66396196644e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d005578_T001","Zm00001d005578",null,0.96806524015,2.47920297625e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d012413_T001","Zm00001d012413","sp|Q9FHR7|WRK49_ARATH Probable WRKY transcription factor 49 OS=Arabidopsis thaliana GN=WRKY49 PE=2 SV=1//3.58812e-07",0.953233043767,1.62850972485E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d003540_T001","Zm00001d003540",null,0.959871440649,7.66034609967e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d046568_T003","Zm00001d046568","sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2//1.00228e-152",0.95032420381,2.19116065869e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d004930_T001","Zm00001d004930","sp|Q9LDC0|FKB42_ARATH Peptidyl-prolyl cis-trans isomerase FKBP42 OS=Arabidopsis thaliana GN=FKBP42 PE=1 SV=1//7.1053e-29",0.951077347133,2.03261714238e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d046568_T001","Zm00001d046568","sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2//1.00228e-152",0.961964857094,5.88090184106e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d033404_T002","Zm00001d033404","sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1//2.92959e-14",0.95808908382,9.49086451429e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d022188_T002","Zm00001d022188","sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1//8.54022e-08",0.956413775426,1.15128700462e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d051291_T005","Zm00001d051291","sp|Q6Z7H3|CCT12_ORYSJ Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2//3.63464e-36",0.962761626106,5.29733335419e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d010554_T002","Zm00001d010554","sp|Q5PPV4|CHAC2_XENLA Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1//4.91117e-14",0.951040084946,2.04024059736e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d047951_T004","Zm00001d047951",null,0.96229181191,5.63556038724e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d041864_T005","Zm00001d041864","sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=2 SV=1//3.10472e-07",0.954354570564,1.44513232181E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d013662_T001","Zm00001d013662","sp|Q10FZ7|YAB2_ORYSJ Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1//1.13318e-54",0.950032326056,2.25517557295e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d037236_T001","Zm00001d037236","sp|Q9LV09|BOB1_ARATH Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1//1.97705e-88",0.979097685859,3.03411682445e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d012708_T003","Zm00001d012708","sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana GN=EMB1417 PE=2 SV=1//1.13502e-80",0.950220153357,2.2138135729E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d020438_T001","Zm00001d020438","sp|Q6P4K8|PIN4_XENTR Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Xenopus tropicalis GN=pin4 PE=2 SV=1//1.16375e-10",0.958573074913,8.96271234341e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d027460_T001","Zm00001d027460","sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus GN=Phrf1 PE=2 SV=2//3.3243e-07",0.962939802808,5.17336604e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d033834_T001","Zm00001d033834","sp|Q9FL03|SCL4_ARATH Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=2 SV=1//3.74592e-136",-0.951956712652,1.85916366535e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d032671_T001","Zm00001d032671",null,0.955162432841,1.32350720472E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d037104_T008","Zm00001d037104","sp|Q8S904|MFDX2_ARATH Adrenodoxin-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=MFDX2 PE=2 SV=1//1.66981e-68",0.976471208572,5.45935368024e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d028344_T002","Zm00001d028344","sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1//0",0.978597824489,3.41181367602e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d006562_T001","Zm00001d006562","sp|Q9STF9|PP266_ARATH Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN=At3g46870 PE=1 SV=1//2.1528e-98",0.966373745455,3.19997430775E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d020030_T001","Zm00001d020030",null,0.950241423239,2.20916785532e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d013560_T001","Zm00001d013560","sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1//2.31611e-60",0.962758301703,5.29966855067e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d028471_T005","Zm00001d028471","sp|Q9SLZ0|PCKA_MAIZE Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1//0",0.962491615119,5.48968371206e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d015260_T004","Zm00001d015260","sp|Q9FLU1|BIN4_ARATH DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2//1.46928e-33",0.971689507693,1.3657922926E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d035318_T001","Zm00001d035318","sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1//4.35514e-25",0.950563649377,2.13972864316e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d053376_T006","Zm00001d053376","sp|O22034|CFXQ2_CYACA Protein cfxQ homolog OS=Cyanidium caldarium GN=cfxQ PE=3 SV=1//1.0902e-16",0.961053300018,6.61001413604e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d000313_T001","Zm00001d000313","sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=2 SV=1//2.5001e-29",0.957786126464,9.833840795e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d032379_T004","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",0.955305518746,1.30283967525e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d016068_T001","Zm00001d016068","sp|Q9LVY0|PRFB1_ARATH Peptide chain release factor PrfB1, chloroplastic OS=Arabidopsis thaliana GN=PRFB1 PE=2 SV=1//3.05439e-139",0.954072479836,1.48962965851e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d020409_T001","Zm00001d020409","sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1//3.41516e-08",0.952387418878,1.77860781747E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d010536_T001","Zm00001d010536","sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus GN=HACD2 PE=2 SV=2//2.76262e-35",0.958875666469,8.64455897087e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d049636_T002","Zm00001d049636","sp|Q6ZK48|SLU7_ORYSJ Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica GN=Os08g0127700 PE=2 SV=1//0",0.95106218717,2.03571598156e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d001869_T001","Zm00001d001869","sp|Q689D6|RPD1_ARATH Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1//2.32739e-32",0.955017184069,1.34475244584E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d013667_T001","Zm00001d013667","sp|Q9LW00|MBD11_ARATH Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana GN=MBD11 PE=1 SV=1//3.07403e-23",0.954508219615,1.42134325376E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d010510_T001","Zm00001d010510","sp|Q9FG37|GACP3_ARATH Gamma-tubulin complex component 3 OS=Arabidopsis thaliana GN=GCP3 PE=1 SV=1//5.08355e-11",0.964205591515,4.3575221742e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d038206_T002","Zm00001d038206","sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3//0",0.968702186374,2.24403930993E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d018334_T001","Zm00001d018334","sp|Q93YV9|SKIP8_ARATH F-box protein SKIP8 OS=Arabidopsis thaliana GN=SKIP8 PE=1 SV=1//1.89206e-12",0.955943596282,1.21377018703e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d010560_T001","Zm00001d010560",null,0.977549752961,4.32550002483e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d024317_T001","Zm00001d024317","sp|Q9LIS1|CR26L_ARATH Protein ECERIFERUM 26-like OS=Arabidopsis thaliana GN=CER26L PE=2 SV=1//1.14473e-33",0.9530141895,1.66635357801e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d025526_T002","Zm00001d025526","sp|Q9C7Z9|SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2//5.03363e-07",0.952454451983,1.76632359317E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d013706_T001","Zm00001d013706","sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1//5.30488e-17",0.957791980795,9.827121219e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d012549_T002","Zm00001d012549","sp|Q8S1Z1|UTP11_ORYSJ Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2//5.15595e-119",0.953280811092,1.62034130113E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d048802_T001","Zm00001d048802","sp|Q9SZJ2|GRDP2_ARATH Glycine-rich domain-containing protein 2 OS=Arabidopsis thaliana GN=GRDP2 PE=2 SV=1//8.33406e-17",0.952762673304,1.71070344512e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d013360_T002","Zm00001d013360","sp|B6IZJ1|DNAJ_COXB2 Chaperone protein DnaJ OS=Coxiella burnetii (strain CbuG_Q212) GN=dnaJ PE=3 SV=1//1.99667e-06",0.953623730767,1.5626501455e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d000432_T002","Zm00001d000432","sp|A7SWH1|PESC_NEMVE Pescadillo homolog OS=Nematostella vectensis GN=v1g194255 PE=3 SV=1//1.45783e-15",0.954755202561,1.38375579595E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d027445_T002","Zm00001d027445","sp|O82359|LCKB2_ARATH Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana GN=LCKB2 PE=2 SV=1//4.22677e-08",0.955695946616,1.24774616062E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d001425_T001","Zm00001d001425",null,0.9521284233,1.82670869409E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d014122_T002","Zm00001d014122","sp|P79769|TSN_CHICK Translin OS=Gallus gallus GN=TSN PE=1 SV=1//8.57553e-17",0.960991260642,6.66212932821E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d018983_T001","Zm00001d018983","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",0.953942692263,1.51046425634E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d031163_T002","Zm00001d031163","sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 OS=Arabidopsis thaliana GN=At3g48420 PE=1 SV=1//2.70989e-18",0.962776406228,5.28696109114e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d004498_T002","Zm00001d004498","sp|Q10126|YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6 OS=Caenorhabditis elegans GN=F52C9.6 PE=5 SV=1//3.69456e-10",0.956515302961,1.13813639024E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d012786_T001","Zm00001d012786","sp|Q6NQJ6|RNR1_ARATH Ribonuclease II, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=RNR1 PE=2 SV=1//2.95122e-32",0.976697322853,5.20400087467e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d021762_T002","Zm00001d021762","sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1//4.611e-25",0.956522540147,1.13720354888e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d053967_T001","Zm00001d053967","sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1//7.94859e-92",0.982365201958,1.30405370946E-8]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d018946_T001","Zm00001d018946","sp|Q6ZLC4|COAD1_ORYSJ Phosphopantetheine adenylyltransferase 1 OS=Oryza sativa subsp. japonica GN=Os07g0179400 PE=2 SV=1//2.18625e-71",0.970876779638,1.57126617717e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d050121_T001","Zm00001d050121",null,0.963042746319,5.10280074639e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d021031_T001","Zm00001d021031","sp|P93411|CCC11_ORYSJ Cyclin-C1-1 OS=Oryza sativa subsp. japonica GN=Os09g0504400 PE=2 SV=1//2.39013e-88",0.952204653947,1.81244521702E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d005951_T001","Zm00001d005951","sp|Q6K498|HOX4_ORYSJ Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1//4.20252e-81",0.968154651637,2.44505900859E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d043779_T001","Zm00001d043779","sp|Q5N9Q7|PTHM_ORYSJ Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1//1.31081e-131",0.97976104339,2.58514547546e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d004331_T001","Zm00001d004331",null,0.957596566553,1.00533965819e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d046683_T017","Zm00001d046683","sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2//4.86741e-28",0.960802741065,6.82249862383e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d012168_T003","Zm00001d012168","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//7.37537e-20",0.974113404347,8.76586949694e-08]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d021407_T001","Zm00001d021407","sp|Q6F6B5|ARC3_ARATH Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Arabidopsis thaliana GN=ARC3 PE=1 SV=2//8.91237e-138",0.968666528872,2.25671586973E-7]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d025770_T001","Zm00001d025770","sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1//2.25228e-40",0.954974935526,1.35098259157e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d052321_T001","Zm00001d052321","sp|P81748|MIFH_TRITR Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2//1.6305e-17",0.951138498316,2.02015522421e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d036490_T001","Zm00001d036490","sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1//7.90137e-162",-0.953978674598,1.50466504646e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d038673_T004","Zm00001d038673","sp|Q80UY1|CARME_MOUSE Carnosine N-methyltransferase OS=Mus musculus PE=2 SV=1//3.39283e-73",0.961093908744,6.57607720722e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d011424_T012","Zm00001d011424","sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1//1.8026e-46",0.95022729475,2.21225290353e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d023262_T070","Zm00001d023262","sp|Q6ZBH9|NCKP1_ORYSJ Probable protein NAP1 OS=Oryza sativa subsp. japonica GN=NAP1 PE=2 SV=1//0",0.968527315698,2.30675400115e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d003518_T004","Zm00001d003518",null,0.962935897981,5.17605789341e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d048193_T002","Zm00001d048193","sp|Q94EH2|TI222_ARATH Mitochondrial import inner membrane translocase subunit TIM22-2 OS=Arabidopsis thaliana GN=TIM22-2 PE=1 SV=1//9.46692e-52",0.953677827924,1.55369994448e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d038653_T001","Zm00001d038653","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//3.98983e-27",0.967486544411,2.7094764965e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d032127_T001","Zm00001d032127","sp|Q9LYR5|FKB19_ARATH Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1//1.9127e-82",0.956584419316,1.12925235474e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d008397_T001","Zm00001d008397",null,0.958468703228,9.07458273858e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d032310_T001","Zm00001d032310","sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1//2.52792e-96",-0.952414458533,1.77364450771E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d020457_T001","Zm00001d020457","sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1//7.03233e-95",0.954006214713,1.50023840284e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d029095_T005","Zm00001d029095","sp|Q9AYT5|RSH1_ORYSJ Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica GN=RSH1 PE=2 SV=1//7.26566e-133",0.956471978887,1.14373338356E-6]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d053828_T002","Zm00001d053828",null,0.961777287171,6.02543550166e-07]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d032804_T001","Zm00001d032804","sp|B6TNW8|ITPA_MAIZE Inosine triphosphate pyrophosphatase OS=Zea mays PE=2 SV=1//8.71106e-146",0.950328143,2.19030668003e-06]
["LNC_002362","XLOC_023385","lncRNA","Zm00001d011541_T008","Zm00001d011541","sp|O49500|MBR2_ARATH E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1//6.91516e-08",0.954026164721,1.49703821029e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051429_T001","Zm00001d051429",null,0.981800977601,1.52500798656e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038161_T001","Zm00001d038161","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//7.46835e-24",0.98259293892,1.22246444079e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032867_T002","Zm00001d032867","sp|Q3B116|PGK_PELLD Phosphoglycerate kinase OS=Pelodictyon luteolum (strain DSM 273) GN=pgk PE=3 SV=1//3.21456e-13",0.966609576892,3.0905553472e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021708_T006","Zm00001d021708","sp|Q2V3H0|PP322_ARATH Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana GN=At4g18975 PE=2 SV=2//2.16833e-12",0.969439226137,1.9944448626E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049203_T001","Zm00001d049203","sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1//9.50773e-18",0.958300820735,9.25685095465e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006377_T001","Zm00001d006377","sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SYNO PE=2 SV=3//0",0.971967978455,1.30053902536e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026700_T001","Zm00001d026700",null,0.969925693224,1.8421909731E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005051_T001","Zm00001d005051","sp|Q682S0|RPT2_ARATH Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2//1.47242e-81",0.981288826865,1.750505918E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022060_T001","Zm00001d022060","sp|Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2//2.35055e-35",0.992633937633,1.68689506808E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039900_T003","Zm00001d039900","sp|Q0JQS5|EGY2_ORYSJ Probable zinc metalloprotease EGY2, chloroplastic OS=Oryza sativa subsp. japonica GN=EGY2 PE=2 SV=1//1.55528e-08",0.986350103472,3.64746766124e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034543_T001","Zm00001d034543","sp|P32869|PSAD_CUCSA Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1//9.03436e-98",0.963981974996,4.49364782273e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039900_T008","Zm00001d039900","sp|Q0JQS5|EGY2_ORYSJ Probable zinc metalloprotease EGY2, chloroplastic OS=Oryza sativa subsp. japonica GN=EGY2 PE=2 SV=1//1.55528e-08",0.965242823211,3.76831415849e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028820_T001","Zm00001d028820","sp|Q5FWN8|DNJ6A_XENLA DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-a PE=2 SV=1//2.7001e-16",0.9671476539,2.8520248363e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044468_T004","Zm00001d044468","sp|P53980|YNB1_YEAST Uncharacterized protein YNL011C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL011C PE=1 SV=1//1.36185e-52",0.958366603547,9.1850881212e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027944_T001","Zm00001d027944","sp|Q8L8Q8|Y5486_ARATH Uncharacterized protein At5g64816 OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1//4.35037e-71",0.968376088783,2.36210649707E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015519_T001","Zm00001d015519",null,0.976576177816,5.33959858551e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034705_T001","Zm00001d034705",null,0.98337847661,9.71707159181e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031720_T001","Zm00001d031720","sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1//0",0.969704208447,1.9103188631E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000060_T001","Zm00001d000060","sp|Q7G764|NADO1_ORYSJ Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1//2.18431e-121",0.961899020073,5.93131572746e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036912_T001","Zm00001d036912","sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1//1.2437e-19",0.994354817695,4.47251125024e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039029_T002","Zm00001d039029","sp|P46314|YCF23_ANTSP Uncharacterized protein ycf23 OS=Antithamnion sp. GN=ycf23 PE=3 SV=1//1.68499e-20",0.976360625563,5.58781811932e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039029_T005","Zm00001d039029","sp|P46314|YCF23_ANTSP Uncharacterized protein ycf23 OS=Antithamnion sp. GN=ycf23 PE=3 SV=1//1.68499e-20",0.99447697116,4.00990352034e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039029_T004","Zm00001d039029","sp|P46314|YCF23_ANTSP Uncharacterized protein ycf23 OS=Antithamnion sp. GN=ycf23 PE=3 SV=1//1.68499e-20",0.964502115835,4.18209194164E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027729_T001","Zm00001d027729","sp|Q94AQ8|PNSB2_ARATH Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana GN=PNSB2 PE=2 SV=1//5.69648e-102",0.968628487566,2.27030264366e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010128_T003","Zm00001d010128","sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1//7.06276e-26",0.956795534836,1.10245651697E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010128_T001","Zm00001d010128","sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1//7.06276e-26",0.985956382864,4.20197121542E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040665_T007","Zm00001d040665","sp|Q9SVE7|MATE3_ARATH MATE efflux family protein 3, chloroplastic OS=Arabidopsis thaliana GN=DTX45 PE=2 SV=2//2.19158e-10",0.957682924281,9.95289613615e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017659_T001","Zm00001d017659","sp|Q0BUN4|RL18_GRABC 50S ribosomal protein L18 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplR PE=3 SV=1//5.79592e-08",0.996758454682,2.80331313718e-12]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G815606_T01","GRMZM5G815606","sp|P25459|RR18_MAIZE 30S ribosomal protein S18, chloroplastic OS=Zea mays GN=rps18 PE=3 SV=1//2.20091e-97",0.982993238363,1.08895203965E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031636_T001","Zm00001d031636","sp|Q9C7F7|LTPG1_ARATH Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LTPG1 PE=1 SV=1//1.60263e-24",0.952060853066,1.83942603704e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030944_T001","Zm00001d030944","sp|P0C7R2|LIPBL_ARATH Putative lipoyltransferase-like protein, chloroplastic OS=Arabidopsis thaliana GN=At1g47578 PE=3 SV=1//1.34879e-32",0.983592138197,9.11164610429e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019898_T002","Zm00001d019898","sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1//5.54593e-07",0.965894699308,3.43172244843e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019898_T001","Zm00001d019898","sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1//5.54593e-07",0.966649231961,3.0724525546e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052439_T003","Zm00001d052439","sp|O43120|UAP2_SCHPO Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uap2 PE=1 SV=1//1.44165e-21",0.967289457225,2.79166977757e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003975_T001","Zm00001d003975",null,0.990350571177,6.48277875825e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003975_T002","Zm00001d003975",null,0.984948938201,5.93144622307e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009849_T001","Zm00001d009849","sp|Q9LIG6|NIFU4_ARATH NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1//3.54824e-35",0.956026297707,1.20258917158E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027876_T001","Zm00001d027876","sp|Q8RUF8|NILP3_ARATH Omega-amidase,chloroplastic OS=Arabidopsis thaliana GN=NLP3 PE=1 SV=1//2.74353e-06",0.964161478127,4.38411291714e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027876_T005","Zm00001d027876","sp|Q8RUF8|NILP3_ARATH Omega-amidase,chloroplastic OS=Arabidopsis thaliana GN=NLP3 PE=1 SV=1//2.74353e-06",0.983665577934,8.91064733111e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042847_T001","Zm00001d042847","sp|Q9M394|SCKL1_ARATH Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana GN=FLN1 PE=1 SV=1//0",0.966567810807,3.10971345563e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000430_T001","Zm00001d000430","sp|Q67UQ7|MRS2B_ORYSJ Magnesium transporter MRS2-B OS=Oryza sativa subsp. japonica GN=MRS2-B PE=2 SV=1//0",0.974125191422,8.74610415202e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011788_T001","Zm00001d011788","sp|Q9STK5|PP269_ARATH Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2 SV=1//3.49723e-150",0.967688513082,2.6272564968e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033344_T001","Zm00001d033344","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//0",0.966636749651,3.07814168821e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008610_T001","Zm00001d008610","sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1//2.08182e-28",0.971498658785,1.41199899328e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020431_T002","Zm00001d020431","sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus GN=Birc2 PE=1 SV=1//4.59889e-06",0.951597579778,1.92852214242e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020431_T003","Zm00001d020431","sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus GN=Birc2 PE=1 SV=1//4.59889e-06",0.970987570682,1.54189339296E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035969_T001","Zm00001d035969","sp|A1E9Q6|RR16_SORBI 30S ribosomal protein S16, chloroplastic OS=Sorghum bicolor GN=rps16 PE=3 SV=1//4.51525e-40",0.957412747598,1.02700029769E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013013_T003","Zm00001d013013","sp|Q6ATS0|CHLD_ORYSJ Magnesium-chelatase subunit ChlD, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLD PE=1 SV=1//0",0.964851655821,3.98255735723e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035034_T001","Zm00001d035034","sp|P43188|KADC_MAIZE Adenylate kinase, chloroplastic OS=Zea mays GN=ADK1 PE=1 SV=1//8.33703e-158",0.986890833849,2.98272628818e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044415_T002","Zm00001d044415","sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2//1.06206e-16",0.980603341472,2.09311601385E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042044_T001","Zm00001d042044","sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2//2.14938e-163",0.958650095001,8.88086327144e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035072_T001","Zm00001d035072","sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1//6.38764e-54",0.96381634407,4.596637182e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025435_T001","Zm00001d025435","sp|Q8VY52|PPD2_ARATH PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana GN=PPD2 PE=1 SV=1//1.01099e-60",0.952419790423,1.772667102e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035072_T002","Zm00001d035072","sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1//6.38764e-54",0.956145461053,1.18662254356e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046490_T002","Zm00001d046490","sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2//1.73197e-98",0.9667671357,3.01912638445E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045319_T001","Zm00001d045319","sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1//4.34736e-11",0.950196185701,2.2190578115e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038465_T001","Zm00001d038465","sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana GN=NFD4 PE=3 SV=1//3.65241e-66",0.954466172474,1.42782217782e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025079_T001","Zm00001d025079","sp|Q9M622|RMR1_ARATH Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Arabidopsis thaliana GN=RMR1 PE=2 SV=1//1.00229e-33",0.957968538226,9.62617610956e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038027_T001","Zm00001d038027",null,0.982301580577,1.32760562543e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012635_T002","Zm00001d012635",null,0.992041458729,2.48112419499e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028712_T013","Zm00001d028712","sp|Q9SA96|AROD1_ARATH Arogenate dehydratase/prephenate dehydratase 1, chloroplastic OS=Arabidopsis thaliana GN=ADT1 PE=1 SV=1//6.23092e-22",0.970369544856,1.71148499373e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012624_T028","Zm00001d012624","sp|Q9FNI6|SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1//5.614e-27",0.950923354766,2.06426928018e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004400_T001","Zm00001d004400","sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1//9.12955e-144",0.963668510044,4.69013714088e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014920_T008","Zm00001d014920","sp|Q6WWW4|UPL3_ARATH E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1//0",0.962085961024,5.78905761994e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041036_T001","Zm00001d041036","sp|Q9FGP9|RER1_ARATH Protein RETICULATA-RELATED 1 OS=Arabidopsis thaliana GN=RER1 PE=2 SV=1//1.59782e-12",0.966137437286,3.3126828014e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042289_T001","Zm00001d042289",null,0.971359985131,1.44634739296e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028987_T002","Zm00001d028987","sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=2 SV=1//0",-0.950228225655,2.21204952941e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001803_T002","Zm00001d001803","sp|Q8BY89|CTL2_MOUSE Choline transporter-like protein 2 OS=Mus musculus GN=Slc44a2 PE=1 SV=2//4.08614e-42",-0.960436455726,7.14285386256e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000037_T001","Zm00001d000037","sp|O23522|PLA14_ARATH Phospholipase A1-Ibeta2, chloroplastic OS=Arabidopsis thaliana GN=At4g16820 PE=1 SV=2//5.11114e-117",0.97242023285,1.19987257019e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014356_T001","Zm00001d014356",null,-0.964665903729,4.08762784414e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022504_T001","Zm00001d022504","sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana GN=NHX2 PE=2 SV=2//0",0.953251039318,1.62542857929e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025640_T001","Zm00001d025640","sp|Q9LRS2|TBL22_ARATH Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana GN=AXY4L PE=2 SV=1//2.20628e-08",0.951809364186,1.88737710571e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016988_T002","Zm00001d016988","sp|Q6MEE7|TRUA1_PARUW tRNA pseudouridine synthase A 1 OS=Protochlamydia amoebophila (strain UWE25) GN=truA1 PE=3 SV=1//7.97512e-59",0.98808489999,1.85393700392E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016988_T003","Zm00001d016988","sp|Q6MEE7|TRUA1_PARUW tRNA pseudouridine synthase A 1 OS=Protochlamydia amoebophila (strain UWE25) GN=truA1 PE=3 SV=1//7.97512e-59",0.961742080482,6.0528761936e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017395_T001","Zm00001d017395","sp|Q8H1Q1|TL225_ARATH Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1//2.67958e-105",0.986098393299,3.99472144252e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016988_T001","Zm00001d016988","sp|Q6MEE7|TRUA1_PARUW tRNA pseudouridine synthase A 1 OS=Protochlamydia amoebophila (strain UWE25) GN=truA1 PE=3 SV=1//7.97512e-59",0.955360265492,1.29500008494e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002971_T001","Zm00001d002971",null,0.985303028113,5.26892440789E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019439_T001","Zm00001d019439","sp|H9BFQ2|TPRL3_ERYCB Tropinone reductase-like 3 OS=Erythroxylum coca PE=2 SV=1//4.00617e-113",0.960347292262,7.22261609631e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012029_T001","Zm00001d012029","sp|Q6M9M7|Y1998_PARUW Uncharacterized RNA methyltransferase pc1998 OS=Protochlamydia amoebophila (strain UWE25) GN=pc1998 PE=3 SV=1//3.70077e-65",0.978066253468,3.85364620215e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002871_T001","Zm00001d002871","sp|Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1//0",0.958301227497,9.2564058507e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041179_T006","Zm00001d041179","sp|Q4LDF9|OEP37_PEA Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1//2.89024e-70",0.985526102705,4.88283968814e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034828_T002","Zm00001d034828","sp|P74142|RS1B_SYNY3 30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1b PE=3 SV=1//1.30499e-13",0.976520150403,5.4032545771e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043703_T007","Zm00001d043703","sp|Q0JJZ6|CACLC_ORYSJ Anoctamin-like protein Os01g0706700 OS=Oryza sativa subsp. japonica GN=Os01g0706700 PE=2 SV=1//0",0.97225813886,1.23521211481E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025652_T005","Zm00001d025652","sp|P49572|TRPC_ARATH Indole-3-glycerol phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g04400 PE=2 SV=2//6.69036e-158",0.959580426612,7.93825888579e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019414_T001","Zm00001d019414","sp|O48958|C71E1_SORBI 4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1//1.67017e-144",0.978060449006,3.85871032904e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034852_T002","Zm00001d034852",null,0.975066120609,7.27890250296e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015505_T001","Zm00001d015505","sp|Q8GMT0|Y464_SYNE7 Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_0464 PE=3 SV=2//7.19434e-20",0.963135915283,5.03959725284e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002384_T002","Zm00001d002384","sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1//5.42753e-74",0.976435325998,5.50077783323e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007012_T001","Zm00001d007012","sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1//4.57336e-78",0.983279814099,1.00072536924E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025963_T001","Zm00001d025963","sp|Q9LRB0|LCBK1_ARATH Sphingoid long-chain bases kinase 1 OS=Arabidopsis thaliana GN=LCBK1 PE=1 SV=1//0",-0.96293550527,5.17632867428e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015484_T001","Zm00001d015484","sp|Q1LUI2|HDDC2_DANRE HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1//4.05823e-51",0.952420712803,1.77249806077e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043168_T001","Zm00001d043168",null,0.982809438158,1.14872764634E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033634_T001","Zm00001d033634",null,0.99109056424,4.35553815237e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017941_T001","Zm00001d017941","sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1//0",0.954362488274,1.44389877521E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043534_T001","Zm00001d043534","sp|O81004|Y2287_ARATH GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2//1.23569e-89",0.985783608221,4.46559522693e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052746_T001","Zm00001d052746","sp|A3A9H6|ACET1_ORYSJ Probable ascorbate-specific transmembrane electron transporter 1 OS=Oryza sativa subsp. japonica GN=Os02g0642300 PE=3 SV=1//2.30729e-56",0.958344451443,9.20920445235e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G808402_T01","GRMZM5G808402","sp|P00827|ATPB_MAIZE ATP synthase subunit beta, chloroplastic OS=Zea mays GN=atpB PE=3 SV=1//0",0.953994144099,1.50217729189e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018348_T001","Zm00001d018348","sp|O81304|PAP11_ARATH Probable plastid-lipid-associated protein 11 OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1//1.20899e-37",0.977152332657,4.71899883614e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000942_T001","Zm00001d000942",null,0.967853220478,2.56168550816e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036490_T001","Zm00001d036490","sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1//7.90137e-162",-0.968081299156,2.47304267229e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015200_T001","Zm00001d015200","sp|Q94AX2|PTST_ARATH Protein PTST, chloroplastic OS=Arabidopsis thaliana GN=PTST PE=1 SV=1//6.32524e-65",0.96830511156,2.38844750422e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043538_T001","Zm00001d043538","sp|Q942D4|BURP3_ORYSJ BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1//7.94963e-10",0.955166670358,1.32289141641E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046242_T002","Zm00001d046242","sp|Q5Z922|S40A1_ORYSJ Solute carrier family 40 member 1 OS=Oryza sativa subsp. japonica GN=Os06g0560000 PE=2 SV=1//4.91521e-112",0.987873188015,2.02388461545e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008394_T001","Zm00001d008394","sp|Q9SW33|TL1Y_ARATH Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At4g24930 PE=1 SV=1//4.26465e-45",0.990144059275,7.20433046553e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031717_T001","Zm00001d031717","sp|Q39204|MYC2_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=MYC2 PE=1 SV=2//3.23694e-17",0.98289649483,1.12009734821E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018693_T001","Zm00001d018693","sp|Q9SQU6|PP216_ARATH Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1//0",0.957220094952,1.05009791529E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017931_T001","Zm00001d017931","sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1//2.8304e-15",0.99385578088,6.82545131525e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003715_T001","Zm00001d003715","sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1//1.11909e-79",0.969990556051,1.82261003179e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008634_T001","Zm00001d008634","sp|Q9FG13|CXE15_ARATH Probable carboxylesterase 15 OS=Arabidopsis thaliana GN=CXE15 PE=2 SV=1//2.85894e-51",0.982326607961,1.31830062422E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015468_T001","Zm00001d015468","sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2//2.67933e-29",0.976286160674,5.67567264298e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043565_T001","Zm00001d043565","sp|Q4V8W7|UBTD1_DANRE Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1//7.0191e-20",0.956918922534,1.08703088952e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018336_T003","Zm00001d018336","sp|F4ILY9|ANTL1_ARATH Amino acid transporter ANTL1 OS=Arabidopsis thaliana GN=At2g42005 PE=2 SV=1//3.26295e-13",0.978781573556,3.2688550089E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053828_T002","Zm00001d053828",null,0.980878972086,1.94946685461e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053828_T001","Zm00001d053828",null,0.952932943966,1.68057864469e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014349_T001","Zm00001d014349","sp|Q9T0A4|NDHS_ARATH NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana GN=ndhS PE=1 SV=1//2.40201e-43",0.989655846188,9.16691611508e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009907_T001","Zm00001d009907","sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1//2.78177e-61",-0.970171848151,1.7687582357e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039104_T001","Zm00001d039104","sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1//2.9544e-140",0.985033011694,5.76843772748e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019479_T008","Zm00001d019479","sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1//4.5694e-50",0.970739914622,1.60816478356E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047760_T001","Zm00001d047760","sp|O80362|RK10_TOBAC 50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1//1.92645e-86",0.986666860284,3.2451685783e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047067_T002","Zm00001d047067","sp|Q2JL42|CH10_SYNJB 10 kDa chaperonin OS=Synechococcus sp. (strain JA-2-3B&apos;a(2-13)) GN=groS PE=3 SV=1//5.39731e-09",0.969829995909,1.87138565755e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029635_T001","Zm00001d029635","sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1//1.62714e-105",0.952679821826,1.72551588173E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052435_T002","Zm00001d052435","sp|Q94BZ1|ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1//1.78797e-158",0.958126093925,9.4496254599e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017178_T006","Zm00001d017178",null,0.958431094874,9.11516378821e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027416_T001","Zm00001d027416","sp|P73245|Y1917_SYNY3 Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1917 PE=2 SV=1//6.38731e-91",0.981052809599,1.8629899845e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024241_T002","Zm00001d024241",null,0.984010084123,8.01442179288e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024241_T001","Zm00001d024241",null,0.980736630331,2.02263343851e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017178_T003","Zm00001d017178",null,0.976293835594,5.66656717105e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032455_T001","Zm00001d032455","sp|Q337B8|ETFQO_ORYSJ Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os10g0516300 PE=3 SV=1//0",0.958176581852,9.39359815266e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040842_T001","Zm00001d040842","sp|Q69TH4|OPR2_ORYSJ Putative 12-oxophytodienoate reductase 2 OS=Oryza sativa subsp. japonica GN=OPR2 PE=3 SV=1//2.0772e-177",0.984446201443,6.98459512449e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015210_T001","Zm00001d015210","sp|Q6MEG4|RSMH_PARUW Ribosomal RNA small subunit methyltransferase H OS=Protochlamydia amoebophila (strain UWE25) GN=rsmH PE=3 SV=1//2.04805e-67",0.970261214,1.74268283359e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048451_T001","Zm00001d048451","sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1//9.43697e-135",0.981032277152,1.8730416329e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042473_T002","Zm00001d042473","sp|Q9LFB8|PTR5_ARATH Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana GN=NPF8.2 PE=2 SV=1//4.37639e-166",0.953405845746,1.59911365749E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039867_T005","Zm00001d039867","sp|Q9S9P3|FDM1_ARATH Factor of DNA methylation 1 OS=Arabidopsis thaliana GN=FDM1 PE=1 SV=1//8.31497e-26",0.95863154086,8.90052621161e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033619_T001","Zm00001d033619","sp|C5WNV2|PURA2_SORBI Adenylosuccinate synthetase 2, chloroplastic OS=Sorghum bicolor GN=PURA2 PE=3 SV=1//0",0.977010151958,4.86650550968e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014284_T001","Zm00001d014284","sp|P49016|MENG_LACLA Demethylmenaquinone methyltransferase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=menG PE=3 SV=1//7.74841e-09",0.966632584277,3.08004203031e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012083_T002","Zm00001d012083",null,0.988737110775,1.40065026244E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029498_T001","Zm00001d029498",null,0.971561151558,1.39673386412e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000016_T001","Zm00001d000016","sp|Q9SZ42|FAD4_ARATH Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana GN=FAD4 PE=2 SV=1//2.81958e-49",0.990476969978,6.07044858825e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045351_T001","Zm00001d045351",null,0.958697625238,8.8306499757e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023340_T001","Zm00001d023340","sp|B0JHV3|EFP_MICAN Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) GN=efp PE=3 SV=1//9.0186e-63",0.962014535883,5.8430868366e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042530_T003","Zm00001d042530","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//3.2525e-12",0.974245694949,8.54606483358e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016691_T003","Zm00001d016691","sp|O82089|CCH_ARATH Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1//1.06882e-29",0.97366217832,9.54969892053e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022206_T002","Zm00001d022206","sp|Q8LI30|DPE1_ORYSJ 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=DPE1 PE=2 SV=2//0",0.951271167742,1.993327019e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051053_T001","Zm00001d051053",null,0.961639158729,6.13366511804e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027597_T001","Zm00001d027597",null,0.961369486753,6.34941543343e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039065_T007","Zm00001d039065","sp|P42775|GBF2_ARATH G-box-binding factor 2 OS=Arabidopsis thaliana GN=GBF2 PE=1 SV=1//8.07252e-13",0.970803585683,1.59091434027e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020799_T017","Zm00001d020799","sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=2 SV=2//4.65097e-124",0.958151346678,9.42156897832E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045665_T001","Zm00001d045665","sp|Q40742|RAD23_ORYSJ Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2//2.81694e-109",0.978985688719,3.11569210432e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021246_T001","Zm00001d021246","sp|Q9LNK1|RABA3_ARATH Ras-related protein RABA3 OS=Arabidopsis thaliana GN=RABA3 PE=2 SV=1//3.36492e-77",0.978377964921,3.58936880218e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026361_T001","Zm00001d026361","sp|Q9LSX7|PEX22_ARATH Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana GN=PEX22 PE=1 SV=1//1.63018e-61",-0.954248117421,1.46179865329E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034616_T004","Zm00001d034616","sp|Q84TX2|SCRL1_ORYSJ SCAR-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0816900 PE=2 SV=2//0",0.966281603423,3.24355317272e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048028_T001","Zm00001d048028","sp|C4IZX0|TATC_MAIZE Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=TATC PE=2 SV=1//1.37631e-74",0.96528828307,3.74402258974e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034886_T001","Zm00001d034886","sp|Q84T61|HSFA1_ORYSJ Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1//0",0.97994827172,2.46853910646e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035737_T002","Zm00001d035737","sp|Q944I4|GLYK_ARATH D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=GLYK PE=1 SV=2//4.82871e-179",0.987739879971,2.13712159081e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035737_T001","Zm00001d035737","sp|Q944I4|GLYK_ARATH D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=GLYK PE=1 SV=2//4.82871e-179",0.992453073642,1.90384152887E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048693_T001","Zm00001d048693",null,0.977939693199,3.96527304325e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011334_T002","Zm00001d011334","sp|Q9ZQI3|GDL40_ARATH GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana GN=At2g27360 PE=2 SV=1//6.22974e-104",0.955882480262,1.2220858121E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016863_T001","Zm00001d016863","sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1//2.28676e-94",0.964241589324,4.33591850424e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045539_T001","Zm00001d045539","sp|O04066|ACBP_RICCO Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1//8.2403e-43",0.979850225719,2.52906720011e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003632_T001","Zm00001d003632","sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1//0",0.952834393578,1.69796270288E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044328_T001","Zm00001d044328","sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1A PE=3 SV=1//4.64077e-19",0.984827451663,6.17346662679e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011034_T001","Zm00001d011034","sp|Q9FRL8|DHAR2_ARATH Glutathione S-transferase DHAR2 OS=Arabidopsis thaliana GN=DHAR2 PE=1 SV=1//6.93402e-37",0.951734358469,1.90186861637e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047462_T002","Zm00001d047462","sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana GN=RPL6 PE=2 SV=1//6.12512e-98",0.991508628127,3.42754935545e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047462_T001","Zm00001d047462","sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana GN=RPL6 PE=2 SV=1//6.12512e-98",0.959678301186,7.84391151587e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005607_T001","Zm00001d005607","sp|Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1//1.92536e-62",0.985777547855,4.47507630952E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023698_T006","Zm00001d023698","sp|Q2QWT4|DPNP_ORYSJ 3&apos;(2&apos;),5&apos;-bisphosphate nucleotidase OS=Oryza sativa subsp. japonica GN=Os12g0183300 PE=2 SV=1//3.34228e-08",0.991312432864,3.84098530759e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010499_T001","Zm00001d010499","sp|Q55CU8|RSC5_DICDI Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1//1.98382e-18",0.984942524026,5.94403193332e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025267_T001","Zm00001d025267","sp|O48950|TATB_MAIZE Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays GN=TATB PE=1 SV=1//1.06465e-98",0.977474066615,4.39834626498e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027846_T001","Zm00001d027846","sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2//1.64065e-49",0.984262035956,7.40572403402e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002725_T004","Zm00001d002725","sp|F4JMI5|GUX7_ARATH Putative glucuronosyltransferase PGSIP7 OS=Arabidopsis thaliana GN=PGSIP7 PE=3 SV=1//9.68707e-14",-0.955286444216,1.30557992872e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043563_T004","Zm00001d043563","sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1//0",-0.969144991214,2.09128478908E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045340_T007","Zm00001d045340","sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1//6.64298e-35",0.964339969429,4.27731089214e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038732_T001","Zm00001d038732","sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1//6.23028e-23",0.955166243367,1.32295345567E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046786_T001","Zm00001d046786","sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1//2.55363e-143",0.96501538289,3.89173646642e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051796_T002","Zm00001d051796","sp|E2RBS6|SETD3_CANFA Histone-lysine N-methyltransferase setd3 OS=Canis familiaris GN=SETD3 PE=3 SV=1//1.90208e-11",0.953626786832,1.56214344171e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037616_T001","Zm00001d037616","sp|Q9LS48|SG1_ARATH protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1//5.04108e-31",0.974682424541,7.85139429027e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003846_T002","Zm00001d003846",null,0.95113242884,2.02138939898e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029826_T003","Zm00001d029826","sp|Q54HG5|SDHFA_DICDI Succinate dehydrogenase assembly factor 1A, mitochondrial OS=Dictyostelium discoideum GN=sdhaf1A PE=3 SV=1//2.86156e-11",0.957253386622,1.04607729634e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023262_T070","Zm00001d023262","sp|Q6ZBH9|NCKP1_ORYSJ Probable protein NAP1 OS=Oryza sativa subsp. japonica GN=NAP1 PE=2 SV=1//0",0.966543448661,3.12093191734e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012708_T003","Zm00001d012708","sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana GN=EMB1417 PE=2 SV=1//1.13502e-80",0.952000740281,1.85079875936E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017882_T002","Zm00001d017882","sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1//9.42027e-124",-0.954349551282,1.44591473863e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044693_T001","Zm00001d044693","sp|Q9SRK5|LSF2_ARATH Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana GN=LSF2 PE=1 SV=1//1.36368e-122",0.96944152472,1.9937026563E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048531_T001","Zm00001d048531","sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica GN=Os03g0108600 PE=2 SV=2//3.86858e-71",0.963435208232,4.84076253304e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006401_T001","Zm00001d006401","sp|P46617|CYF_MAIZE Cytochrome f OS=Zea mays GN=petA PE=3 SV=1//1.80407e-87",0.973254381391,1.03051772893E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052002_T001","Zm00001d052002",null,0.990675325594,5.46584777439E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030846_T002","Zm00001d030846","sp|Q2QN30|NRAM6_ORYSJ Metal transporter Nramp6 OS=Oryza sativa subsp. japonica GN=NRAMP6 PE=2 SV=1//0",-0.963090372038,5.07041442446e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016036_T001","Zm00001d016036","sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2//1.25722e-102",0.965814032613,3.47202588458e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026649_T001","Zm00001d026649","sp|Q9SMT7|4CLLA_ARATH Oxalate--CoA ligase OS=Arabidopsis thaliana GN=AAE3 PE=1 SV=1//0",-0.957759394923,9.86456951918e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002240_T001","Zm00001d002240","sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1//1.52553e-11",0.983750165867,8.68353700056e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026452_T001","Zm00001d026452","sp|Q9SLN1|FPP7_ARATH Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=3 SV=2//4.72584e-07",-0.970044296927,1.80651240251e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050637_T002","Zm00001d050637",null,0.957967770082,9.62704322927e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040462_T003","Zm00001d040462","sp|Q8W207|CSN2_ARATH COP9 signalosome complex subunit 2 OS=Arabidopsis thaliana GN=CSN2 PE=1 SV=1//0",0.973095147892,1.06127719057e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032380_T001","Zm00001d032380","sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0575 PE=4 SV=1//2.95738e-23",0.990926240985,4.77097916729e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007288_T005","Zm00001d007288","sp|Q93YZ7|ILVH2_ARATH Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1//2.57044e-11",0.970076664465,1.79687171364e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028471_T003","Zm00001d028471","sp|Q9SLZ0|PCKA_MAIZE Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1//0",0.958444758819,9.10040315993e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044931_T001","Zm00001d044931","sp|Q9ZST9|TIC22_PEA Protein TIC 22, chloroplastic OS=Pisum sativum GN=TIC22 PE=1 SV=1//1.92197e-31",0.963360837585,4.88957767608e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028409_T001","Zm00001d028409","sp|Q9C667|CPNB4_ARATH Chaperonin 60 subunit beta 4, chloroplastic OS=Arabidopsis thaliana GN=CPN60B4 PE=1 SV=1//0",0.964405555329,4.23859083387e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004021_T001","Zm00001d004021","sp|Q39249|VDE_ARATH Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana GN=VDE1 PE=1 SV=1//0",0.970906771448,1.56327119694e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026337_T011","Zm00001d026337","sp|Q43846|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1//0",0.963734422201,4.64826501956E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031439_T001","Zm00001d031439","sp|P74516|TRML_SYNY3 Putative tRNA (cytidine(34)-2&apos;-O)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0992 PE=3 SV=1//2.82769e-40",0.978735311136,3.3043892067e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022542_T002","Zm00001d022542","sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1//8.11172e-138",-0.960631599348,6.97072696408e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028935_T001","Zm00001d028935","sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1//0",0.951917950447,1.86655298062e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002815_T001","Zm00001d002815","sp|Q7FB12|NDHM_ORYSJ NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhM PE=2 SV=1//2.13959e-92",0.981485792671,1.66083959918e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053927_T015","Zm00001d053927","sp|P92965|RS40_ARATH Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana GN=RS40 PE=1 SV=2//9.68743e-70",0.968942684007,2.16001233344e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009481_T001","Zm00001d009481",null,0.979444719334,2.7920982193e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020679_T002","Zm00001d020679",null,0.968183821871,2.43400095634e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028546_T001","Zm00001d028546",null,-0.971704727301,1.36215994446E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022003_T001","Zm00001d022003","sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1//5.39659e-33",0.981876388871,1.49386194526e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047240_T003","Zm00001d047240","sp|O48724|WEB1_ARATH Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 OS=Arabidopsis thaliana GN=WEB1 PE=1 SV=1//2.83471e-130",-0.95740333066,1.02811985501e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048802_T001","Zm00001d048802","sp|Q9SZJ2|GRDP2_ARATH Glycine-rich domain-containing protein 2 OS=Arabidopsis thaliana GN=GRDP2 PE=2 SV=1//8.33406e-17",0.998201548144,1.4788170688e-13]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018916_T001","Zm00001d018916","sp|Q96MB7|HARB1_HUMAN Putative nuclease HARBI1 OS=Homo sapiens GN=HARBI1 PE=1 SV=1//1.3766e-17",0.954021221986,1.49783057202E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053067_T001","Zm00001d053067","sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1//1.46607e-118",0.982558729487,1.23445322853E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043786_T001","Zm00001d043786","sp|Q9C9N6|PMI2_ARATH Protein PLASTID MOVEMENT IMPAIRED 2 OS=Arabidopsis thaliana GN=PMI2 PE=1 SV=1//1.26087e-25",0.972560014476,1.17004828937E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015603_T001","Zm00001d015603","sp|P54122|RNJ_CORGL Ribonuclease J OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=rnj PE=3 SV=2//8.07485e-17",0.977009726002,4.86695286295e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041362_T003","Zm00001d041362","sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1//3.56933e-06",0.987528381731,2.32710428705E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010908_T001","Zm00001d010908","sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1//7.33037e-117",0.957085892422,1.066430102E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004331_T001","Zm00001d004331",null,0.981491684003,1.658215254e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037748_T001","Zm00001d037748","sp|Q5TKD8|TRL2_ORYSJ Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0200100 PE=2 SV=1//1.76261e-97",0.975601334428,6.53639173898e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045673_T003","Zm00001d045673","sp|Q9LS39|CCR4C_ARATH Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2//1.79545e-113",0.962446600632,5.52228389683e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037240_T009","Zm00001d037240","sp|Q8LE52|DHAR3_ARATH Glutathione S-transferase DHAR3, chloroplastic OS=Arabidopsis thaliana GN=DHAR3 PE=1 SV=1//2.7762e-78",0.955093405135,1.33357026466E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025848_T001","Zm00001d025848",null,0.969414124878,2.00256430105e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016996_T001","Zm00001d016996","sp|Q15KI9|PHYLO_ARATH Protein PHYLLO, chloroplastic OS=Arabidopsis thaliana GN=PHYLLO PE=2 SV=2//1.90901e-72",0.956497394199,1.14044736232e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002454_T001","Zm00001d002454","sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1//0",0.977144238754,4.72729906331e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052321_T001","Zm00001d052321","sp|P81748|MIFH_TRITR Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2//1.6305e-17",0.975011922154,7.3576864601e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011611_T005","Zm00001d011611","sp|Q9SEX2|KTNA1_ARATH Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1//5.09632e-58",-0.964834515773,3.99216168898E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035076_T001","Zm00001d035076","sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=3 SV=1//4.66932e-56",0.956265669708,1.1706868297e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039096_T001","Zm00001d039096","sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=3 SV=1//0",0.97712713443,4.74487769075e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015976_T001","Zm00001d015976","sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=1 SV=1//5.15904e-165",0.965718517263,3.52023393102E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024568_T001","Zm00001d024568","sp|Q5J4W4|MPK2_ORYSJ Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1//0",0.953200327042,1.63412325627E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053807_T001","Zm00001d053807","sp|Q6H6D2|HEM3_ORYSJ Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMC PE=2 SV=1//0",0.964653828788,4.09453354777e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029745_T005","Zm00001d029745","sp|Q8LCA1|CUT1B_ARATH Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B PE=1 SV=2//2.54324e-25",0.966626364713,3.08288127471e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008549_T002","Zm00001d008549","sp|Q9LQK7|AB7I_ARATH Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1//3.28093e-23",0.974723756649,7.78805606672e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021392_T002","Zm00001d021392","sp|Q9C5N2|TMN9_ARATH Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana GN=TMN9 PE=2 SV=1//0",-0.950160370198,2.22691277086e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016682_T001","Zm00001d016682",null,-0.958093922627,9.48546469529e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018287_T005","Zm00001d018287","sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 PE=1 SV=1//3.1423e-23",0.955581041474,1.26376462362e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023792_T001","Zm00001d023792","sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2//0",0.965030978611,3.88317204614e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007092_T001","Zm00001d007092","sp|A2BW76|EFTS_PROM5 Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1//2.04558e-73",0.981319384731,1.73634751022e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052030_T001","Zm00001d052030","sp|Q3E911|PP400_ARATH Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1//1.25831e-131",0.955608062978,1.25998306832e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019184_T002","Zm00001d019184","sp|P50846|ALKH_BACSU KHG/KDPG aldolase OS=Bacillus subtilis (strain 168) GN=kdgA PE=2 SV=1//2.7851e-20",0.977336259757,4.5334908938e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020537_T001","Zm00001d020537","sp|Q69QJ7|MGDG1_ORYSJ Probable monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD1 PE=2 SV=1//0",0.96410243071,4.41990735567e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039511_T001","Zm00001d039511",null,0.952422906915,1.77209600571e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042526_T003","Zm00001d042526","sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1//7.94753e-07",0.974533376651,8.08321463097E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042526_T002","Zm00001d042526","sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1//7.94753e-07",0.981904892426,1.4822225225E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048284_T001","Zm00001d048284","sp|Q9C595|YLMG2_ARATH YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana GN=YLMG2 PE=2 SV=1//5.87421e-28",0.979655963494,2.65248765174e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034853_T001","Zm00001d034853","sp|Q67YC9|Y4141_ARATH Uncharacterized protein At4g14100 OS=Arabidopsis thaliana GN=At4g14100 PE=2 SV=1//2.54648e-55",0.955458197592,1.28106989283e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038113_T001","Zm00001d038113","sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana GN=CLSY3 PE=1 SV=1//0",0.984261837025,7.40618943951e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031529_T010","Zm00001d031529","sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2//1.05903e-21",-0.952404767759,1.77542204916e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045430_T001","Zm00001d045430","sp|Q9XJ36|CLPR2_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1//1.37904e-114",0.961311176651,6.3968493702e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023757_T001","Zm00001d023757","sp|Q84VQ4|NDHU_ARATH NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Arabidopsis thaliana GN=ndhU PE=1 SV=1//4.92073e-30",0.950722417894,2.10615703811E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015521_T001","Zm00001d015521","sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=2//5.80564e-102",-0.970878468147,1.57081520557e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015268_T001","Zm00001d015268","sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1//4.70113e-14",0.985577718639,4.79680895005e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023279_T001","Zm00001d023279","sp|O22806|BUBR1_ARATH Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis thaliana GN=BUBR1 PE=1 SV=2//6.05366e-23",-0.958171091964,9.39967755938e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040725_T002","Zm00001d040725","sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1//1.25402e-167",0.951210935557,2.0054718235e-06]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G804776_T01","GRMZM5G804776","sp|P08529|RK14_MAIZE 50S ribosomal protein L14, chloroplastic OS=Zea mays GN=rpl14 PE=1 SV=2//1.67217e-82",0.960738818088,6.87756723794e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047971_T001","Zm00001d047971",null,0.974503201061,8.13080462958e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028153_T003","Zm00001d028153","sp|Q9M4Y3|RR10_MESCR 30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS10 PE=2 SV=1//8.06612e-63",0.956953626663,1.08272329324e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028153_T002","Zm00001d028153","sp|Q9M4Y3|RR10_MESCR 30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS10 PE=2 SV=1//8.06612e-63",0.968968206299,2.15124423164e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017930_T009","Zm00001d017930","sp|O22793|MORF2_ARATH Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana GN=MORF2 PE=1 SV=1//1.47682e-12",0.962282725276,5.64226704247e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008963_T002","Zm00001d008963","sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_00941 PE=3 SV=2//1.38076e-129",0.993031423812,1.27914567827e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048007_T004","Zm00001d048007","sp|O81004|Y2287_ARATH GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2//3.21522e-53",0.969649206293,1.92754413986E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053377_T001","Zm00001d053377","sp|P51412|RK21_ARATH 50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 SV=1//1.19254e-44",0.956279079391,1.16891973434E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048007_T002","Zm00001d048007","sp|O81004|Y2287_ARATH GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2//3.21522e-53",0.952796492968,1.70468613847E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050334_T001","Zm00001d050334",null,0.982861294447,1.13160429915E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033288_T001","Zm00001d033288","sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1//4.59854e-126",0.989509601404,9.83110037822e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007581_T001","Zm00001d007581","sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1//1.21352e-81",0.963137255048,5.03869295176e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029519_T001","Zm00001d029519","sp|Q7X7X4|C99A2_ORYSJ Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2//0",0.982813575532,1.14735392298E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026148_T001","Zm00001d026148","sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1//2.55924e-07",0.950831959635,2.08323899353e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033986_T003","Zm00001d033986","sp|Q9LIL4|P24B3_ARATH Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana GN=At3g22845 PE=2 SV=1//6.83358e-12",-0.959835719737,7.69403641648e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050320_T001","Zm00001d050320","sp|Q9LIS1|CR26L_ARATH Protein ECERIFERUM 26-like OS=Arabidopsis thaliana GN=CER26L PE=2 SV=1//9.38967e-13",0.977141062079,4.73055989936e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017086_T001","Zm00001d017086",null,0.964681563566,4.0786857225e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039589_T021","Zm00001d039589","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//3.83809e-100",0.960733063478,6.88254201631e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034399_T002","Zm00001d034399","sp|Q852K3|RFC5_ORYSJ Replication factor C subunit 5 OS=Oryza sativa subsp. japonica GN=RFC5 PE=2 SV=1//0",0.96627621546,3.24611595826e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031258_T005","Zm00001d031258","sp|Q39061|CP33_ARATH RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1//7.16133e-25",0.97986028816,2.5228013012e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035456_T001","Zm00001d035456",null,0.950060881763,2.24884805178e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047422_T007","Zm00001d047422","sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1//1.12554e-16",0.958119982668,9.45642518957e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G800780_T01","GRMZM5G800780","sp|A1E9V4|CYB6_SORBI Cytochrome b6 OS=Sorghum bicolor GN=petB PE=3 SV=2//5.09901e-155",0.970224799415,1.75327077745E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046502_T001","Zm00001d046502","sp|P09562|RPOA_MAIZE DNA-directed RNA polymerase subunit alpha OS=Zea mays GN=rpoA PE=1 SV=2//3.67958e-39",0.953522514561,1.57950589963E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034699_T001","Zm00001d034699","sp|P35872|NUSG_THET8 Transcription termination/antitermination protein NusG OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nusG PE=1 SV=1//1.80896e-09",0.951954139677,1.85965343635E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047768_T001","Zm00001d047768",null,0.957726590187,9.90238371967e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008923_T001","Zm00001d008923",null,-0.960531609642,7.05850637458E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026490_T012","Zm00001d026490","sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1//0",-0.962529847699,5.46211538539e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023267_T002","Zm00001d023267","sp|P0C8S1|RP8L2_ARATH Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=3 SV=1//3.10666e-38",0.963261378185,4.95547121115e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016826_T001","Zm00001d016826",null,0.961577446211,6.18251604356e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010715_T001","Zm00001d010715",null,0.994170824506,5.24882359798e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033344_T005","Zm00001d033344","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//0",0.981329571597,1.73164798056e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040827_T005","Zm00001d040827","sp|O02751|CFDP2_BOVIN Craniofacial development protein 2 OS=Bos taurus GN=CFDP2 PE=1 SV=2//4.58005e-15",0.983354340365,9.78743175395e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005785_T001","Zm00001d005785","sp|Q8VYD6|PP374_ARATH Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana GN=CBSPPR1 PE=2 SV=1//6.10646e-43",0.986781676988,3.10842551698e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033704_T001","Zm00001d033704","sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica GN=Os03g0708600 PE=2 SV=1//0",0.989751168853,8.75365557818e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024676_T001","Zm00001d024676",null,0.991987808344,2.56565879653e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020442_T001","Zm00001d020442",null,-0.95351765608,1.58031860648e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044101_T002","Zm00001d044101","sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1//7.37244e-16",0.959470972925,8.0448334927e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006657_T001","Zm00001d006657","sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=HPT2 PE=3 SV=2//0",0.965067947233,3.86293051102e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006657_T003","Zm00001d006657","sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=HPT2 PE=3 SV=2//0",0.960146891689,7.40447043013e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046305_T001","Zm00001d046305","sp|Q5Z9E5|BZR3_ORYSJ Protein BZR1 homolog 3 OS=Oryza sativa subsp. japonica GN=BZR3 PE=2 SV=1//3.74301e-150",-0.950351821295,2.18517901266E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007555_T001","Zm00001d007555","sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1//0",0.960059641073,7.48477407164e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002362_T001","Zm00001d002362","sp|Q9FV52|MAP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2//4.84029e-27",0.987188006606,2.66095634416e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018238_T001","Zm00001d018238","sp|Q6Z7L3|TRL31_ORYSJ Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774100 PE=3 SV=2//4.97773e-79",0.99088350716,4.88403983923e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020214_T001","Zm00001d020214",null,0.96920082001,2.07262849772e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046354_T001","Zm00001d046354","sp|Q5HZ36|GAT21_ARATH GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2//3.97688e-17",0.988448996403,1.58843649345E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049232_T002","Zm00001d049232",null,0.967142846217,2.85408914724e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040959_T001","Zm00001d040959",null,0.979057665651,3.06306837672e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033105_T001","Zm00001d033105","sp|P27527|RT19_PETHY Ribosomal protein S19, mitochondrial OS=Petunia hybrida GN=RPS19 PE=2 SV=2//3.15468e-34",0.97100486621,1.53734774244e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037190_T001","Zm00001d037190","sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1//2.73656e-106",0.956007211007,1.20516235569e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032671_T001","Zm00001d032671",null,0.97991947296,2.48619671517e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025470_T008","Zm00001d025470","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//4.39475e-21",0.975269641341,6.98903834806e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011362_T002","Zm00001d011362","sp|P82715|PPD5_ARATH PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana GN=PPD5 PE=1 SV=3//2.07895e-08",0.985701140332,4.59599380775e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029809_T001","Zm00001d029809",null,0.972340149912,1.21723008562e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015374_T002","Zm00001d015374",null,0.953845770008,1.52617331883E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012806_T002","Zm00001d012806",null,0.950298427139,2.19675531254E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052242_T001","Zm00001d052242","sp|Q07300|ATPD_SORBI ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1//2.6301e-95",0.989135810997,1.17046128345E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000313_T001","Zm00001d000313","sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=2 SV=1//2.5001e-29",0.964313384033,4.29308602001e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038766_T001","Zm00001d038766","sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1//7.29612e-47",0.974548106103,8.06006550391e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043101_T001","Zm00001d043101","sp|O22682|CYSK4_ARATH Probable S-sulfocysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=1 SV=1//1.75503e-32",0.954987290194,1.3491583557e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045938_T005","Zm00001d045938",null,0.981920190973,1.47600527356E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033591_T001","Zm00001d033591","sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1//0",0.954243560641,1.46251545297E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034020_T002","Zm00001d034020","sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1//8.33432e-22",0.982961653148,1.09904352286e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028258_T001","Zm00001d028258","sp|O81117|C94A1_VICSA Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2//1.50315e-124",0.971158746785,1.49737227506E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045421_T001","Zm00001d045421","sp|O65693|RBFA_ARATH Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana GN=At4g34730 PE=2 SV=2//2.95222e-66",0.987936326547,1.97195193508E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018334_T001","Zm00001d018334","sp|Q93YV9|SKIP8_ARATH F-box protein SKIP8 OS=Arabidopsis thaliana GN=SKIP8 PE=1 SV=1//1.89206e-12",0.995436066178,1.54753987403e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003552_T002","Zm00001d003552",null,0.967755353286,2.60048798495E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035750_T001","Zm00001d035750","sp|P64956|Y2253_MYCBO Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2253c PE=3 SV=1//1.99669e-09",0.976444766757,5.4898548818e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015772_T001","Zm00001d015772","sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1//4.40321e-38",0.955472424104,1.27905620007E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009596_T001","Zm00001d009596","sp|B3ETC6|ERA_AMOA5 GTPase Era OS=Amoebophilus asiaticus (strain 5a2) GN=era PE=3 SV=1//4.37367e-68",0.965147294006,3.81976880348e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039852_T001","Zm00001d039852","sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2//3.81635e-180",0.970738984864,1.60841778118E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015806_T001","Zm00001d015806",null,0.98665593189,3.25843041438e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031163_T003","Zm00001d031163","sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 OS=Arabidopsis thaliana GN=At3g48420 PE=1 SV=1//2.70989e-18",0.951091891844,2.02964758378E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044130_T002","Zm00001d044130","sp|Q9FWS4|RK31_ARATH 50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana GN=RPL31 PE=2 SV=1//2.80509e-28",0.984364013054,7.1701053983e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022506_T001","Zm00001d022506","sp|Q94KL7|SILD_FORIN Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1//2.25048e-33",-0.955796421999,1.23387176197E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038842_T001","Zm00001d038842","sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1//7.85706e-100",0.983781133133,8.60155768834e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021762_T002","Zm00001d021762","sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1//4.611e-25",0.986902710001,2.96929902888E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008229_T001","Zm00001d008229","sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1//9.85297e-31",0.974299931822,8.45722780696e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032721_T002","Zm00001d032721","sp|B5WWZ8|FAO1_LOTJA Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1//0",0.966713784969,3.04316417843E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032721_T001","Zm00001d032721","sp|B5WWZ8|FAO1_LOTJA Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1//0",0.97149126758,1.41381319319E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033985_T001","Zm00001d033985",null,0.991926523208,2.66502153679E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018810_T001","Zm00001d018810","sp|Q6YT73|GLO5_ORYSJ Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp. japonica GN=GLO5 PE=2 SV=1//0",0.968152123151,2.4460194048e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031071_T001","Zm00001d031071","sp|Q2QM69|BQMT2_ORYSJ 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0615400 PE=2 SV=2//8.15116e-174",0.980999135259,1.88935742607e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024699_T002","Zm00001d024699",null,0.950644467211,2.12258710053E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002137_T001","Zm00001d002137",null,0.952913632117,1.68397403488E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003518_T004","Zm00001d003518",null,0.987883134419,2.01563210567e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017790_T002","Zm00001d017790","sp|Q6YV23|CARA_ORYSJ Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=CARA PE=2 SV=2//0",0.965854285245,3.45186771611e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033922_T001","Zm00001d033922","sp|Q42687|ATPD_CHLRE ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1//3.51121e-13",0.988900231521,1.30247324037e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014327_T001","Zm00001d014327","sp|Q9LVA7|ICLN_ARATH Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g62290 PE=2 SV=1//8.11979e-15",0.954743032469,1.38558923624e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007936_T001","Zm00001d007936","sp|Q69LA6|PDX11_ORYSJ Probable pyridoxal 5&apos;-phosphate synthase subunit PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1//0",0.976621093228,5.28900032659e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014737_T001","Zm00001d014737","sp|Q9LMR3|TYRA2_ARATH Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1//5.23667e-104",0.983534520832,9.27185883626e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016690_T001","Zm00001d016690","sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1//1.55388e-15",0.960838246652,6.79206283216e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012725_T001","Zm00001d012725","sp|Q8LT05|PCF7_ORYSJ Transcription factor PCF7 OS=Oryza sativa subsp. japonica GN=PCF7 PE=2 SV=2//1.02475e-135",0.967559675017,2.67947258159e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037420_T001","Zm00001d037420","sp|Q9SJ85|Y2474_ARATH BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV=2//9.43977e-64",0.974002817528,8.95304710369e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011013_T001","Zm00001d011013","sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2//0",-0.960812243574,6.81434236815e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032175_T001","Zm00001d032175","sp|Q6ER21|ZHD9_ORYSJ Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica GN=ZHD9 PE=3 SV=2//2.48259e-61",0.977590772222,4.28642370487e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034823_T002","Zm00001d034823","sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3//4.93621e-07",0.953937722209,1.51126666315e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034007_T001","Zm00001d034007","sp|Q9C503|NDF5_ARATH Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana GN=NDF5 PE=2 SV=1//4.66213e-45",0.972311154414,1.22356375698e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037512_T003","Zm00001d037512","sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1//1.5693e-06",0.985624155494,4.72044803246e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003913_T002","Zm00001d003913","sp|O48950|TATB_MAIZE Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays GN=TATB PE=1 SV=1//7.11901e-114",0.979105019684,3.02883509384e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029314_T001","Zm00001d029314","sp|Q9LHN7|PHSC_ARATH Probable polyamine transporter At3g13620 OS=Arabidopsis thaliana GN=At3g13620 PE=2 SV=1//1.46422e-114",0.975487409596,6.68914341695e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042329_T002","Zm00001d042329","sp|Q5JJI4|TOM20_ORYSJ Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica GN=TOM20 PE=2 SV=1//5.80441e-10",0.972534759815,1.17539254108E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035092_T001","Zm00001d035092","sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1//3.96804e-27",0.973130753789,1.05433649367E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035066_T001","Zm00001d035066","sp|Q9SRS9|CHIP_ARATH E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1//1.53707e-111",0.958899760003,8.61961728216e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042533_T002","Zm00001d042533","sp|B1XL18|TIG_SYNP2 Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1//5.66744e-07",0.967910492101,2.53919296478e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042533_T001","Zm00001d042533","sp|B1XL18|TIG_SYNP2 Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1//5.66744e-07",0.986158856368,3.90899757008e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046172_T001","Zm00001d046172",null,0.966057804451,3.35136711715e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040696_T003","Zm00001d040696","sp|Q84N48|CAF2P_MAIZE CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1//2.18411e-45",0.982916024001,1.11375364487E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028235_T001","Zm00001d028235","sp|Q9SYK0|HEXO2_ARATH Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1//0",0.960898424272,6.74072434093e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028931_T003","Zm00001d028931","sp|C7G304|GOLS2_SOLLC Galactinol synthase 2 OS=Solanum lycopersicum GN=GOLS2 PE=2 SV=1//1.73082e-175",0.962062296926,5.80691404517e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045742_T001","Zm00001d045742",null,0.980711390457,2.03583274683E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052118_T001","Zm00001d052118","sp|Q84WI0|GIS_ARATH Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1//1.8983e-17",0.982009627278,1.44007363811E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025911_T002","Zm00001d025911","sp|Q498F0|WDR44_XENLA WD repeat-containing protein 44 OS=Xenopus laevis GN=wdr44 PE=2 SV=1//2.05926e-59",-0.969882701559,1.85526138819e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015385_T001","Zm00001d015385","sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1//1.35847e-157",0.970615745186,1.64223429966e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030153_T001","Zm00001d030153",null,0.972534704521,1.17540426281e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002873_T003","Zm00001d002873","sp|Q9FZ89|Y1815_ARATH UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=2 SV=1//5.17335e-14",0.982551888371,1.23686192399e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002873_T005","Zm00001d002873","sp|Q9FZ89|Y1815_ARATH UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=2 SV=1//5.17335e-14",0.99070162184,5.38944888717e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035052_T001","Zm00001d035052",null,0.97385290922,9.2118474182e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036135_T005","Zm00001d036135","sp|Q5VSB7|SODF2_ORYSJ Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0143000 PE=2 SV=1//2.3109e-22",0.959488534368,8.02765787844e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042663_T001","Zm00001d042663","sp|O67550|EX53_AQUAE 5&apos;-3&apos; exonuclease OS=Aquifex aeolicus (strain VF5) GN=aq_1628 PE=3 SV=1//2.5397e-22",0.962645927357,5.3790874821e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012998_T001","Zm00001d012998","sp|O80363|RK17_TOBAC 50S ribosomal protein L17, chloroplastic OS=Nicotiana tabacum GN=RPL17 PE=2 SV=1//1.46577e-80",0.973194577471,1.0419857599E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043170_T001","Zm00001d043170","sp|P82244|RK34_SPIOL 50S ribosomal protein L34, chloroplastic OS=Spinacia oleracea GN=RPL34 PE=1 SV=1//5.17888e-25",0.960106591794,7.44147609755e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007378_T001","Zm00001d007378","sp|Q9ZQ99|U73C1_ARATH UDP-glycosyltransferase 73C1 OS=Arabidopsis thaliana GN=UGT73C1 PE=2 SV=1//5.32298e-61",0.959872218831,7.6596134635e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029251_T001","Zm00001d029251","sp|P93051|ERDL7_ARATH Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2//1.91446e-30",0.985664754454,4.65448479758e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037203_T001","Zm00001d037203","sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730 OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1//4.93135e-33",0.95750839748,1.01568346977e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007445_T001","Zm00001d007445","sp|Q2R2W1|ADO3_ORYSJ Adagio-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0547000 PE=2 SV=2//0",0.957483590286,1.01860897783e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007117_T002","Zm00001d007117","sp|Q0D3S3|OBGC1_ORYSJ Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. japonica GN=OBGC1 PE=3 SV=1//9.28322e-19",0.965433293148,3.66736704782E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050816_T001","Zm00001d050816","sp|Q6Z7F4|ALFL7_ORYSJ PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. japonica GN=Os02g0564100 PE=2 SV=1//6.31535e-13",0.962666747242,5.36430240228e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050121_T001","Zm00001d050121",null,0.972512081608,1.18020812234E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025542_T002","Zm00001d025542","sp|Q641Z5|CHAC2_RAT Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1//3.33493e-30",0.966007588131,3.37594549205E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039066_T002","Zm00001d039066","sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1//1.30683e-06",0.965769106655,3.49463485483e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025249_T001","Zm00001d025249","sp|A6XIG6|SLMH_HYDIT 4-sulfomuconolactone hydrolase OS=Hydrogenophaga intermedia PE=1 SV=1//1.26254e-07",0.987804136484,2.08192529882e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020519_T002","Zm00001d020519",null,0.959502609384,8.0139131331e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021450_T001","Zm00001d021450","sp|B7E7M8|LOGL9_ORYSJ Probable cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOGL9 OS=Oryza sativa subsp. japonica GN=LOGL9 PE=2 SV=1//6.97625e-18",0.963551353077,4.76530344962e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026536_T004","Zm00001d026536","sp|Q7XM16|C3H30_ORYSJ Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN=Os04g0663200 PE=2 SV=3//9.38213e-154",0.963166969736,5.01866953773e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044584_T005","Zm00001d044584","sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2//0",0.967488931669,2.70849285666E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008512_T003","Zm00001d008512","sp|Q9ZU35|AB7G_ARATH ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=2 SV=1//8.34389e-22",0.961312349107,6.39589283757e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009354_T001","Zm00001d009354","sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1//1.54028e-158",0.986292558215,3.72464459275E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007319_T003","Zm00001d007319","sp|Q9MAP5|SBT33_ARATH Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana GN=SBT3.3 PE=2 SV=1//1.17979e-152",0.955044299312,1.34076594893e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053295_T001","Zm00001d053295","sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1//4.3696e-19",0.958647989238,8.88309313662e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041578_T001","Zm00001d041578",null,0.957702153473,9.930626792e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032249_T001","Zm00001d032249","sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2//7.10823e-45",0.983663852897,8.91532780933e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003426_T003","Zm00001d003426","sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1//1.06414e-25",0.973347542986,1.01285345444E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033304_T001","Zm00001d033304","sp|Q9M2Z2|WDR5A_ARATH COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana GN=WDR5A PE=1 SV=1//2.83894e-07",0.974750182872,7.74777373369e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032222_T001","Zm00001d032222","sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1//0",0.980672741553,2.05617736171E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049886_T001","Zm00001d049886","sp|Q0J3L4|GRS10_ORYSJ Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2//1.11007e-64",0.981903670341,1.48272008005E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037354_T001","Zm00001d037354",null,-0.960900475859,6.73897955047e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003947_T022","Zm00001d003947","sp|Q54JE4|ODO1_DICDI 2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=ogdh PE=3 SV=1//4.60594e-101",0.9710214623,1.5329959524E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036727_T001","Zm00001d036727","sp|Q7TMR0|PCP_MOUSE Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2//4.47404e-129",0.95191797325,1.86654862677E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014562_T001","Zm00001d014562","sp|Q5Z678|ILL6_ORYSJ IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1//0",0.989720982453,8.88288109735e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003430_T001","Zm00001d003430","sp|Q9M876|SYYM_ARATH Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=EMB2768 PE=2 SV=1//0",0.975317560279,6.92214654485e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042144_T001","Zm00001d042144",null,0.988953413832,1.27168142683e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035135_T001","Zm00001d035135","sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2//5.93727e-08",0.992216057693,2.22129425964e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006624_T001","Zm00001d006624",null,0.988913560036,1.29470101307E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037327_T001","Zm00001d037327","sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2//1.65081e-67",0.960501885658,7.0847692113e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015497_T004","Zm00001d015497","sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1//1.64604e-34",0.957349956888,1.03448366162e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042640_T002","Zm00001d042640",null,-0.95825836389,9.30340329087e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003612_T001","Zm00001d003612","sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1//1.81506e-27",0.981465851971,1.66974702953e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034513_T001","Zm00001d034513","sp|O64864|YLS3_ARATH Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1//7.0591e-28",0.959855247602,7.67560408121e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048175_T004","Zm00001d048175","sp|Q9C9Q4|JAC1_ARATH J domain-containing protein required for chloroplast accumulation response 1 OS=Arabidopsis thaliana GN=JAC1 PE=1 SV=1//7.63757e-19",0.964099853356,4.42147501722e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028661_T001","Zm00001d028661","sp|Q9FZ84|RBG6_ARATH Glycine-rich RNA-binding protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBG6 PE=2 SV=1//4.27283e-14",0.951768182662,1.89532271389E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052760_T001","Zm00001d052760","sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1//1.84191e-43",0.983005323753,1.08511035712E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011147_T005","Zm00001d011147","sp|Q652N5|PHT44_ORYSJ Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1//9.79076e-128",0.953789447235,1.53536143888e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011147_T007","Zm00001d011147","sp|Q652N5|PHT44_ORYSJ Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1//9.79076e-128",0.978929857867,3.15700534603e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034526_T001","Zm00001d034526",null,0.995736026307,1.10214060101E-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006562_T001","Zm00001d006562","sp|Q9STF9|PP266_ARATH Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN=At3g46870 PE=1 SV=1//2.1528e-98",0.959263760402,8.24970675328e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028244_T001","Zm00001d028244","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//0",0.971098272475,1.51298249484e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010340_T001","Zm00001d010340",null,0.959037217323,8.47841210794e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013560_T001","Zm00001d013560","sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1//2.31611e-60",0.986297348635,3.71817066025e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026381_T002","Zm00001d026381","sp|Q5EA37|CC130_BOVIN Coiled-coil domain-containing protein 130 OS=Bos taurus GN=CCDC130 PE=2 SV=1//5.43031e-48",0.958867125534,8.65341431844e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025252_T001","Zm00001d025252","sp|Q7XRU4|MUB4_ORYSJ Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica GN=MUB4 PE=2 SV=2//2.28635e-50",0.962588020696,5.42037983386E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022113_T004","Zm00001d022113","sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1//1.75845e-62",0.984097134451,7.79976705445e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012612_T001","Zm00001d012612","sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1//3.97362e-27",0.985353007843,5.18037612807E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042049_T004","Zm00001d042049","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//5.09495e-48",0.972583307003,1.1651364229E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039987_T005","Zm00001d039987","sp|P08452|Y1174_SYNP6 Uncharacterized lipoprotein syc1174_c OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1174_c PE=3 SV=2//7.10527e-15",0.9643578092,4.26675106802e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050403_T001","Zm00001d050403","sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1//4.95905e-132",0.958781849141,8.74222566338e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039816_T002","Zm00001d039816","sp|F4JJT9|SYDM_ARATH Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At4g33760 PE=2 SV=1//0",0.964851029097,3.98290821435e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034486_T002","Zm00001d034486","sp|Q851Q6|OBGC2_ORYSJ Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica GN=Os03g0799700 PE=2 SV=1//4.48219e-47",0.955917939531,1.2172556314e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042005_T003","Zm00001d042005","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//1.1026e-27",0.977598351115,4.27923469992e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004651_T001","Zm00001d004651","sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2//0",0.967135201314,2.85737414174E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013360_T002","Zm00001d013360","sp|B6IZJ1|DNAJ_COXB2 Chaperone protein DnaJ OS=Coxiella burnetii (strain CbuG_Q212) GN=dnaJ PE=3 SV=1//1.99667e-06",0.974192521436,8.63388007755e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001425_T001","Zm00001d001425",null,0.966947468443,2.93899102832e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006795_T001","Zm00001d006795","sp|Q8GT20|BEBT_TOBAC Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1//5.53321e-113",0.989381606073,1.04434327852E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020434_T001","Zm00001d020434","sp|Q9CAC5|NDHL_ARATH NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana GN=ndhL PE=2 SV=1//1.15549e-22",0.993793878224,7.17554904384e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020727_T016","Zm00001d020727","sp|Q24K16|ZADH2_BOVIN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1//7.00939e-24",0.973264289712,1.02862744766E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029502_T001","Zm00001d029502","sp|O24357|G6PDC_SPIOL Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1//0",0.977241300957,4.628525474E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001857_T002","Zm00001d001857","sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1//1.67181e-127",0.959034777776,8.4809020473e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032301_T005","Zm00001d032301","sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana GN=At1g78140 PE=2 SV=1//1.37523e-07",0.981024108863,1.8770524246e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047581_T002","Zm00001d047581","sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1//3.25503e-176",0.97203926716,1.28424002988E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032301_T007","Zm00001d032301","sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana GN=At1g78140 PE=2 SV=1//1.37523e-07",0.971113307809,1.50908938235e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010880_T004","Zm00001d010880","sp|Q8VYR5|PP351_ARATH Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana GN=At4g35850 PE=2 SV=1//6.07161e-44",0.955991522726,1.20728065101e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015705_T001","Zm00001d015705",null,0.983014393261,1.08223447981e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047603_T004","Zm00001d047603","sp|P0AB89|PUR8_ECOLI Adenylosuccinate lyase OS=Escherichia coli (strain K12) GN=purB PE=1 SV=1//4.93593e-08",0.9862309537,3.80870446293e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023374_T001","Zm00001d023374",null,0.959436021488,8.079103897e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035445_T003","Zm00001d035445","sp|Q6Z3A3|GSH1B_ORYSJ Glutamate--cysteine ligase B, chloroplastic OS=Oryza sativa subsp. japonica GN=GSH1-2 PE=3 SV=1//1.37715e-94",-0.955137572327,1.32712447323e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015985_T005","Zm00001d015985","sp|Q94FY8|TOCC_MAIZE Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1//1.21518e-12",0.974980076193,7.40429419999e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011709_T001","Zm00001d011709",null,0.977725605437,4.15995486946e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008497_T001","Zm00001d008497","sp|C0ZB13|SYL_BREBN Leucine--tRNA ligase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=leuS PE=3 SV=1//2.26356e-06",0.994086273625,5.63988855617e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008497_T003","Zm00001d008497","sp|C0ZB13|SYL_BREBN Leucine--tRNA ligase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=leuS PE=3 SV=1//2.26356e-06",0.967291261464,2.79090845101e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053978_T001","Zm00001d053978",null,0.951978308722,1.85505684147E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018660_T001","Zm00001d018660","sp|Q84P23|4CLL9_ARATH 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2//8.35449e-136",0.966221667777,3.2721523624e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027367_T002","Zm00001d027367","sp|B6TRH4|RIBD_MAIZE Riboflavin biosynthesis protein PYRD, chloroplastic OS=Zea mays GN=PYRD PE=2 SV=1//8.14107e-59",0.985679851101,4.63014515617e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005707_T001","Zm00001d005707",null,0.96717145793,2.84182142041e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013912_T001","Zm00001d013912","sp|Q43298|CH62_MAIZE Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1//2.03879e-40",0.966168689024,3.29759862083E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026243_T002","Zm00001d026243","sp|O22793|MORF2_ARATH Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana GN=MORF2 PE=1 SV=1//1.05259e-104",0.97119335664,1.48849629955e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025819_T001","Zm00001d025819","sp|Q3ED65|MENG_ARATH 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=MENG PE=1 SV=2//9.15413e-113",0.974652817376,7.89701664061e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005149_T001","Zm00001d005149","sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1//0",0.95248563825,1.76063151036e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033469_T001","Zm00001d033469","sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2//1.2029e-22",0.988083458329,1.85505433237E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026874_T001","Zm00001d026874",null,0.969233906014,2.06163481842E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011938_T002","Zm00001d011938",null,-0.979231558008,2.93885196813e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034019_T001","Zm00001d034019","sp|Q6GN98|N6MT2_XENLA Protein-lysine N-methyltransferase n6amt2 OS=Xenopus laevis GN=n6amt2 PE=2 SV=1//1.535e-47",0.986977354997,2.88600454645e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007656_T001","Zm00001d007656","sp|Q05728|PUR5_ARATH Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic OS=Arabidopsis thaliana GN=PUR5 PE=1 SV=2//1.22709e-103",0.97111713115,1.50810067545e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G831540_T01","GRMZM5G831540","sp|P46617|CYF_MAIZE Cytochrome f OS=Zea mays GN=petA PE=3 SV=1//0",0.978531254983,3.46481785485e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019976_T001","Zm00001d019976","sp|Q88BD4|ALGC_PSESM Phosphomannomutase/phosphoglucomutase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=algC PE=3 SV=1//1.29143e-37",0.986938813001,2.92877633257E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049965_T001","Zm00001d049965","sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1//6.94383e-15",0.977863428442,4.03377327096E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044201_T005","Zm00001d044201","sp|A2ZVG7|FTSH9_ORYSJ ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1//6.10764e-28",0.959045616465,8.46984390623e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038091_T006","Zm00001d038091","sp|A8MS41|CCR4D_ARATH Carbon catabolite repressor protein 4 homolog 4 OS=Arabidopsis thaliana GN=CCR4-4 PE=2 SV=1//1.52418e-09",0.975685407234,6.42545854301e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047602_T001","Zm00001d047602",null,0.952677797474,1.72587907077e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036345_T002","Zm00001d036345","sp|P49085|PSY_MAIZE Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1//0",0.974234812972,8.56397808224e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002136_T001","Zm00001d002136","sp|O22227|MIZ1_ARATH Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1//2.88571e-34",0.966624505213,3.08373054425e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040254_T001","Zm00001d040254","sp|Q9SB42|MDA1_ARATH Mediator-associated protein 1 OS=Arabidopsis thaliana GN=At4g25210 PE=1 SV=1//2.22715e-11",0.983508636236,9.34456179102e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014055_T002","Zm00001d014055","sp|F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1//6.65367e-62",0.963777385205,4.62113221911e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053713_T001","Zm00001d053713","sp|P82024|RR21_SPIOL 30S ribosomal protein S21, chloroplastic (Fragment) OS=Spinacia oleracea GN=rps21 PE=1 SV=1//1.55448e-07",0.968774260037,2.21858948324E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045747_T004","Zm00001d045747","sp|Q92IH1|TOP1_RICCN DNA topoisomerase 1 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=topA PE=3 SV=1//1.44235e-62",0.972533004422,1.17576473002e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034283_T001","Zm00001d034283","sp|P13192|PSAF_HORVU Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2//3.14067e-108",0.977534589003,4.34001736771e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034885_T005","Zm00001d034885","sp|Q8H100|AGD8_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1//4.30391e-133",-0.952351543822,1.7852099246e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034516_T007","Zm00001d034516","sp|P53799|FDFT_ARATH Squalene synthase OS=Arabidopsis thaliana GN=SQS1 PE=1 SV=1//1.16587e-47",0.961794343897,6.01217679863e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015387_T001","Zm00001d015387",null,0.957099650059,1.06474660644E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024204_T001","Zm00001d024204","sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1//0",0.956497028763,1.14049455746e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000943_T001","Zm00001d000943",null,0.975665451687,6.45165290081e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027885_T001","Zm00001d027885","sp|Q9C595|YLMG2_ARATH YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana GN=YLMG2 PE=2 SV=1//5.00486e-40",0.963226545225,4.97871479155e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036533_T004","Zm00001d036533",null,0.957268707513,1.0442311118e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018247_T001","Zm00001d018247","sp|P93751|ZFP8_ARATH Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1//9.20295e-25",0.953645915649,1.55897479304E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015427_T001","Zm00001d015427","sp|P49087|VATA_MAIZE V-type proton ATPase catalytic subunit A (Fragment) OS=Zea mays PE=2 SV=1//7.75252e-58",0.95865863505,8.87182447062e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045366_T002","Zm00001d045366","sp|P41347|FTRC_MAIZE Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays GN=FTRC PE=2 SV=1//2.54888e-75",0.980504075195,2.14686886046E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028585_T001","Zm00001d028585","sp|O22056|SIGB_ARATH RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2//9.33476e-108",0.960398504162,7.17671787998e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033717_T001","Zm00001d033717",null,0.957698693948,9.93463034948e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006833_T001","Zm00001d006833",null,0.992488235234,1.86000992386e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049501_T001","Zm00001d049501",null,0.986659765451,3.25377325083e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030010_T001","Zm00001d030010",null,0.984967206659,5.89571724774e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049785_T003","Zm00001d049785","sp|Q84W55|IP5PF_ARATH Type II inositol polyphosphate 5-phosphatase 15 OS=Arabidopsis thaliana GN=IP5P15 PE=1 SV=2//0",0.963513844564,4.78956968308e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033969_T006","Zm00001d033969","sp|B8AJT9|MRS2I_ORYSI Magnesium transporter MRS2-I OS=Oryza sativa subsp. indica GN=MRS2-I PE=3 SV=1//1.74164e-06",0.964721006282,4.0562319481e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048336_T004","Zm00001d048336","sp|A3C4N5|PP2A4_ORYSJ Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2//6.00205e-26",0.964015215907,4.47320145591e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G858556_T01","GRMZM5G858556","sp|P09561|RR11_MAIZE 30S ribosomal protein S11, chloroplastic OS=Zea mays GN=rps11 PE=3 SV=2//1.02158e-96",0.98048630943,2.1566040953E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028894_T001","Zm00001d028894","sp|Q9LSP7|UBC32_ARATH Ubiquitin-conjugating enzyme E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1//3.98746e-29",0.955809752658,1.23204020497e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038337_T001","Zm00001d038337","sp|Q8H1F6|DGP3_ARATH DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana GN=DGP3 PE=2 SV=1//2.54877e-155",0.966261234152,3.2532502825e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012812_T002","Zm00001d012812","sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2//8.1297e-87",0.976784595791,5.10802780074e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022564_T001","Zm00001d022564","sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana GN=At4g02110 PE=3 SV=3//2.6204e-62",-0.955310170496,1.30217209609E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019084_T002","Zm00001d019084","sp|Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1//3.34089e-64",-0.95197643065,1.85541369986e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041453_T001","Zm00001d041453","sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana GN=SNL4 PE=3 SV=3//2.64364e-47",-0.952899554235,1.68645262242E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043207_T002","Zm00001d043207",null,0.96695805035,2.93434180065e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028562_T001","Zm00001d028562","sp|O64422|F16P1_ORYSJ Fructose-1,6-bisphosphatase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0267300 PE=2 SV=1//0",0.963271319333,4.94885346036e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011569_T001","Zm00001d011569","sp|P12403|ATPZ_NOSS1 ATP synthase protein I OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=atpI PE=3 SV=2//6.7685e-09",0.967019125887,2.90762205202e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038922_T003","Zm00001d038922","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//9.56297e-30",0.967070882075,2.88513121394E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048323_T001","Zm00001d048323","sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1//8.43436e-82",0.984780284923,6.26952623151e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051458_T001","Zm00001d051458","sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1//6.7788e-106",0.98181483461,1.51924632874E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022477_T001","Zm00001d022477","sp|A3BNA1|FLP5_ORYSJ Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os07g0671000 PE=3 SV=1//2.55497e-50",0.955980173614,1.20881489574e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022588_T003","Zm00001d022588",null,0.988498731322,1.55466262086E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003411_T002","Zm00001d003411","sp|O48609|RRP3_HORVU 30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare GN=PSRP3 PE=2 SV=1//6.97897e-56",0.966800912002,3.00398632191e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036416_T001","Zm00001d036416","sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=1 SV=1//0",-0.950805430631,2.08877108577e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032098_T001","Zm00001d032098",null,0.995102575486,2.20059526157e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012413_T001","Zm00001d012413","sp|Q9FHR7|WRK49_ARATH Probable WRKY transcription factor 49 OS=Arabidopsis thaliana GN=WRKY49 PE=2 SV=1//3.58812e-07",0.966045602272,3.35732634138e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028232_T004","Zm00001d028232","sp|O49044|SODC2_MESCR Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1//5.38473e-35",0.975563827798,6.58637091533e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036698_T001","Zm00001d036698","sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1//0",0.966469379499,3.15523768002e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010314_T001","Zm00001d010314","sp|Q93W28|Y4554_ARATH Uncharacterized protein At4g15545 OS=Arabidopsis thaliana GN=At4g15545 PE=1 SV=1//6.85647e-76",0.979759714391,2.58598857883e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012141_T001","Zm00001d012141","sp|F4JF21|PTA10_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 OS=Arabidopsis thaliana GN=PTAC10 PE=1 SV=1//0",0.950331477263,2.18958405007e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046568_T001","Zm00001d046568","sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2//1.00228e-152",0.98685149485,3.02755021053e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036307_T003","Zm00001d036307","sp|P16024|RPOC1_MAIZE DNA-directed RNA polymerase subunit beta&apos; OS=Zea mays GN=rpoC1 PE=3 SV=1//1.57518e-68",0.950970249641,2.05458924007e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012488_T001","Zm00001d012488","sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana GN=NFD4 PE=3 SV=1//1.90972e-65",0.983618167006,9.03999808344e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044659_T001","Zm00001d044659",null,0.97779074179,4.09993425876e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017770_T002","Zm00001d017770","sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1//4.15438e-124",0.976238613168,5.73234300028e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020438_T004","Zm00001d020438","sp|Q6P4K8|PIN4_XENTR Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Xenopus tropicalis GN=pin4 PE=2 SV=1//1.16375e-10",0.976827916146,5.06091561991e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027309_T005","Zm00001d027309","sp|G4LTX4|DSP4_CASSA Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa GN=DSP4 PE=1 SV=1//7.00096e-38",0.988029577006,1.89720283927e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020438_T001","Zm00001d020438","sp|Q6P4K8|PIN4_XENTR Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Xenopus tropicalis GN=pin4 PE=2 SV=1//1.16375e-10",0.991113439413,4.3000736305e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048116_T001","Zm00001d048116",null,0.970705880245,1.61744660554E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029257_T001","Zm00001d029257",null,0.969722232131,1.90470103245e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027309_T009","Zm00001d027309","sp|G4LTX4|DSP4_CASSA Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa GN=DSP4 PE=1 SV=1//7.00096e-38",0.9815192034,1.64600013619e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027309_T008","Zm00001d027309","sp|G4LTX4|DSP4_CASSA Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa GN=DSP4 PE=1 SV=1//7.00096e-38",0.965556249048,3.60335233429e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000428_T001","Zm00001d000428","sp|Q8RWW1|TMN10_ARATH Transmembrane 9 superfamily member 10 OS=Arabidopsis thaliana GN=TMN10 PE=2 SV=1//0",-0.971764926258,1.34786800628e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004118_T003","Zm00001d004118","sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4 PE=2 SV=2//1.87782e-52",0.981455881554,1.67421503328e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043157_T002","Zm00001d043157","sp|Q9LET3|RBL20_ARATH Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1//2.59354e-100",-0.958479566263,9.06288779951e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040855_T001","Zm00001d040855",null,0.97848594692,3.50126700965E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018983_T001","Zm00001d018983","sp|A2YMV6|WNK1_ORYSI Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2//0",0.99063729315,5.57787149802e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034932_T001","Zm00001d034932","sp|F4I933|STR8_ARATH Rhodanese-like domain-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=STR8 PE=2 SV=1//7.71474e-33",0.967309624159,2.78316940605e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004903_T001","Zm00001d004903",null,0.96677549175,3.01537518732e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025770_T001","Zm00001d025770","sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1//2.25228e-40",0.984062268461,7.88518406125e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033259_T001","Zm00001d033259","sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1//0",0.963412470534,4.85564571662e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032379_T003","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",0.960755775523,6.86292438878e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032379_T004","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",0.975323947625,6.91326884628e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010510_T001","Zm00001d010510","sp|Q9FG37|GACP3_ARATH Gamma-tubulin complex component 3 OS=Arabidopsis thaliana GN=GCP3 PE=1 SV=1//5.08355e-11",0.96067299067,6.93464500934e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006520_T001","Zm00001d006520","sp|Q195N6|PDRP1_MAIZE Pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Zea mays GN=PDRP1 PE=1 SV=1//0",0.970590430129,1.64925019641e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051816_T001","Zm00001d051816","sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1//3.87871e-14",0.975290940402,6.95924291527e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030593_T002","Zm00001d030593","sp|B4JCG4|ZGPAT_DROGR Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila grimshawi GN=GH11061 PE=3 SV=1//5.25689e-09",0.968393474721,2.35568962559e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023707_T002","Zm00001d023707","sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1//6.64325e-101",0.982560290054,1.23390428985E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013706_T001","Zm00001d013706","sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1//5.30488e-17",0.990150399305,7.18126447197e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010928_T001","Zm00001d010928","sp|Q9LXE5|DRM1_ARATH DNA (cytosine-5)-methyltransferase DRM1 OS=Arabidopsis thaliana GN=DRM1 PE=3 SV=2//8.92064e-81",-0.95832168425,9.23404278788e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002405_T001","Zm00001d002405","sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2//1.03405e-80",-0.954540153003,1.41643833512e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027694_T002","Zm00001d027694","sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment) OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1//0",0.95485029664,1.36949595131e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013426_T002","Zm00001d013426","sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2//0",-0.952944233796,1.67859619529e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002122_T001","Zm00001d002122","sp|Q9LFD5|BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=1//3.0121e-27",0.974336188858,8.39825209376e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027499_T001","Zm00001d027499","sp|Q9SS01|AAE20_ARATH Benzoate--CoA ligase, peroxisomal OS=Arabidopsis thaliana GN=AAE20 PE=1 SV=1//0",0.98446695657,6.9383592205e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034350_T001","Zm00001d034350",null,0.952110776033,1.83002332221E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015004_T002","Zm00001d015004","sp|Q8H0W0|LPA3_ARATH Protein LOW PSII ACCUMULATION 3, chloroplastic OS=Arabidopsis thaliana GN=LPA3 PE=1 SV=1//6.93852e-149",0.976857089471,5.02938433122e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027847_T002","Zm00001d027847",null,0.976215328264,5.76025946941e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023525_T001","Zm00001d023525","sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1//2.60133e-178",0.96299083466,5.13828865234E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034027_T005","Zm00001d034027","sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2//2.29546e-14",0.959384542992,8.12979040976e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022188_T002","Zm00001d022188","sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1//8.54022e-08",0.997353432612,1.01785246898E-12]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017345_T002","Zm00001d017345","sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica GN=Os02g0636300 PE=2 SV=1//0",0.974502680528,8.13162750468e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022602_T001","Zm00001d022602",null,0.959333320601,8.18047515061e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017711_T001","Zm00001d017711","sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1//0",0.952761110481,1.71098191459E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037337_T001","Zm00001d037337","sp|P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1//0",0.972492914297,1.18429042573E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022099_T001","Zm00001d022099","sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1//6.1646e-69",0.963709121545,4.66430251533e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011445_T009","Zm00001d011445","sp|Q5VNN5|DEF1B_ORYSJ Peptide deformylase 1B, chloroplastic OS=Oryza sativa subsp. japonica GN=PDF1B PE=2 SV=1//3.72999e-107",0.986082005468,4.01821242946e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013443_T001","Zm00001d013443","sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1//1.09639e-51",0.963644929545,4.70518977336e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008727_T003","Zm00001d008727","sp|Q43270|PLDA1_MAIZE Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1//5.87145e-84",0.965528638834,3.61764910917e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017024_T001","Zm00001d017024","sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1//1.86684e-10",0.958509017282,9.03124159901e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038974_T001","Zm00001d038974",null,0.975073067912,7.2688525643e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033910_T003","Zm00001d033910","sp|P55229|GLGL1_ARATH Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3//0",0.984087795064,7.82257458809e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008133_T001","Zm00001d008133",null,0.95906550611,8.44958134349e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027442_T001","Zm00001d027442","sp|Q9ZST0|RK5_ORYSJ 50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL5 PE=2 SV=2//6.93304e-140",0.979680516214,2.63662887079e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052364_T011","Zm00001d052364","sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic OS=Arabidopsis thaliana GN=NFS2 PE=1 SV=1//0",0.951863859856,1.87690329323e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013741_T007","Zm00001d013741","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//3.51416e-154",0.966187200483,3.28868954735E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042939_T003","Zm00001d042939","sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1//1.09297e-80",0.952732198161,1.71614010602e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031220_T001","Zm00001d031220","sp|Q9SX65|DNAT1_ARATH 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana GN=DHNAT1 PE=1 SV=1//3.75489e-61",0.967098842692,2.87303853597e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034739_T001","Zm00001d034739","sp|Q86I22|FAHD1_DICDI Acylpyruvase FAHD1, mitochondrial OS=Dictyostelium discoideum GN=fahd1 PE=3 SV=1//7.18512e-81",0.973138758054,1.05278119999e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024519_T004","Zm00001d024519",null,0.963326911191,4.91197572394e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052240_T001","Zm00001d052240","sp|Q9SV96|PP358_ARATH Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana GN=EMB2453 PE=2 SV=1//0",0.958040912988,9.54475350756e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021515_T001","Zm00001d021515","sp|Q9LU21|PNSB3_ARATH Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana GN=PNSB3 PE=2 SV=1//8.32453e-59",0.968977152703,2.14817743371e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030767_T001","Zm00001d030767","sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1//1.45928e-14",0.950754066049,2.09951525498e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024519_T008","Zm00001d024519",null,0.951571385921,1.93366006807e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048621_T001","Zm00001d048621","sp|Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1//0",0.99088744556,4.87353268852e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049343_T003","Zm00001d049343","sp|Q9LU39|GLUBP_ARATH Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana GN=GLUTRBP PE=1 SV=1//2.28627e-07",0.987086618966,2.76745337757e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021245_T001","Zm00001d021245","sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1//5.01509e-88",0.982604508364,1.21843100054E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044765_T001","Zm00001d044765","sp|B6SU46|AAMT2_MAIZE Anthranilate O-methyltransferase 2 OS=Zea mays GN=AAMT2 PE=1 SV=1//0",0.957104071112,1.06420605905e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014488_T002","Zm00001d014488","sp|Q02764|RK24_TOBAC 50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum GN=RPL24 PE=1 SV=1//1.28689e-66",0.975605892716,6.53033829234e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034600_T001","Zm00001d034600",null,-0.95133034301,1.98145220359e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032385_T001","Zm00001d032385","sp|P55238|GLGS_HORVU Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1//0",0.965175763459,3.80437630065E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038047_T001","Zm00001d038047",null,0.950259298932,2.20526947059e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038485_T001","Zm00001d038485","sp|Q9LZV4|STN8_ARATH Serine/threonine-protein kinase STN8, chloroplastic OS=Arabidopsis thaliana GN=STN8 PE=2 SV=1//0",0.983059326801,1.06807584999e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053087_T001","Zm00001d053087","sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1//1.17177e-95",0.952809872181,1.70231030561e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022381_T018","Zm00001d022381","sp|Q70G58|NTRC_ORYSJ Thioredoxin reductase NTRC OS=Oryza sativa subsp. japonica GN=Os07g0657900 PE=1 SV=2//6.94318e-93",0.981943622856,1.46652299193E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029095_T014","Zm00001d029095","sp|Q9AYT5|RSH1_ORYSJ Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica GN=RSH1 PE=2 SV=1//7.26566e-133",0.962547686884,5.4492898105e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030496_T001","Zm00001d030496","sp|Q6NKU9|TI223_ARATH Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis thaliana GN=TIM22-3 PE=2 SV=1//1.50955e-41",0.985422852808,5.05862596256e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048814_T001","Zm00001d048814","sp|Q9FIG6|DIR1_ARATH Dirigent protein 1 OS=Arabidopsis thaliana GN=DIR1 PE=2 SV=1//2.75344e-20",0.991555208661,3.33482130799e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019573_T001","Zm00001d019573","sp|Q84N49|CAF1P_MAIZE CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1//0",0.958750294846,8.77527085885e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029201_T001","Zm00001d029201","sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana GN=RPL6 PE=2 SV=1//4.44173e-98",0.985202650457,5.45041123345e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014781_T001","Zm00001d014781",null,0.996240696416,5.87574433553e-12]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010336_T002","Zm00001d010336","sp|Q6AUK5|MSRB3_ORYSJ Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB3 PE=2 SV=1//2.80098e-53",0.962487089758,5.49295411822e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010336_T001","Zm00001d010336","sp|Q6AUK5|MSRB3_ORYSJ Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB3 PE=2 SV=1//2.80098e-53",0.975222362629,7.05554010771e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019218_T001","Zm00001d019218","sp|Q8H2J9|GPDA_ORYSJ Glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0229800 PE=2 SV=3//0",0.983156823273,1.03786252925e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034665_T001","Zm00001d034665","sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=2 SV=2//1.85261e-36",0.981472755404,1.6666589886e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017767_T002","Zm00001d017767","sp|Q6NQL6|LPPE2_ARATH Lipid phosphate phosphatase epsilon 2, chloroplastic OS=Arabidopsis thaliana GN=LPPE2 PE=1 SV=1//6.90676e-43",0.981534359901,1.63930331532e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042367_T002","Zm00001d042367","sp|O23264|SEBP1_ARATH Selenium-binding protein 1 OS=Arabidopsis thaliana GN=SBP1 PE=1 SV=1//0",0.972102911129,1.26982667048e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012689_T001","Zm00001d012689","sp|Q9M812|CUT1C_ARATH Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C PE=1 SV=1//4.75589e-11",0.991960194904,2.61005439484e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004489_T001","Zm00001d004489","sp|P31605|YCF23_CYAPA Uncharacterized protein ycf23 OS=Cyanophora paradoxa GN=ycf23 PE=3 SV=1//6.25034e-06",0.955689389919,1.2486558445e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038403_T001","Zm00001d038403",null,0.984596448204,6.6553766942e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017482_T001","Zm00001d017482",null,0.976845296635,5.04211143948e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025228_T003","Zm00001d025228",null,0.968814408683,2.20451258359e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036230_T001","Zm00001d036230","sp|P51281|YCF45_PORPU Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1//8.19156e-137",0.979998398291,2.43804318956e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011311_T001","Zm00001d011311","sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1//1.38769e-07",0.972257838674,1.23527831963E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040804_T001","Zm00001d040804","sp|Q9SRY4|LPA1_ARATH Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1//1.15057e-17",0.971433382171,1.42808565418e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040804_T003","Zm00001d040804","sp|Q9SRY4|LPA1_ARATH Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1//1.15057e-17",0.98831903783,1.67946057061E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030762_T001","Zm00001d030762",null,0.982173065104,1.37621536389E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009715_T001","Zm00001d009715","sp|Q6I581|GH35_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1//8.13051e-95",0.954024460542,1.49731136667e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008940_T003","Zm00001d008940","sp|Q6NLC1|AB2D_ARATH ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=1//4.42829e-21",0.971905618598,1.31493123723E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047396_T001","Zm00001d047396","sp|Q336V5|ACR21_ORYSJ Arsenate reductase 2.1 OS=Oryza sativa subsp. japonica GN=ACR2.1 PE=1 SV=1//3.89205e-26",0.981625248145,1.59959907542e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000230_T002","Zm00001d000230","sp|Q9SEL7|DEGP5_ARATH Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3//1.52967e-99",0.981415433173,1.69243892234e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044745_T006","Zm00001d044745","sp|C5Z7K4|SYAP_SORBI Alanine--tRNA ligase, chloroplastic/mitochondrial OS=Sorghum bicolor GN=Sb10g008780 PE=3 SV=1//3.9654e-30",0.972353430219,1.21433791467e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022182_T002","Zm00001d022182","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//3.87215e-17",0.983380022376,9.71257918536e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020237_T001","Zm00001d020237","sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1//1.59022e-52",0.968857231672,2.18957643128e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053432_T001","Zm00001d053432","sp|Q69S39|UCRIA_ORYSJ Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1//6.084e-129",0.986662092434,3.25094928755E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051082_T001","Zm00001d051082",null,0.979522758923,2.7398562974e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006013_T001","Zm00001d006013",null,0.975469805868,6.71299820176e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029983_T001","Zm00001d029983","sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3//0",0.981173653234,1.80469907907e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010910_T003","Zm00001d010910","sp|P93045|BSH_ARATH Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BSH PE=1 SV=2//3.29724e-91",0.958725122756,8.80170337059E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033527_T004","Zm00001d033527","sp|Q9AUK4|MRS2A_ORYSJ Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica GN=MRS2-A PE=2 SV=1//6.08997e-07",0.965995274563,3.38199419581e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043492_T001","Zm00001d043492","sp|F4IF99|LPXB_ARATH Probable lipid-A-disaccharide synthase, mitochondrial OS=Arabidopsis thaliana GN=LPXB PE=2 SV=1//8.37293e-11",0.952127062678,1.82696408557e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021557_T001","Zm00001d021557","sp|O80507|CSK2E_ARATH Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1//7.85816e-132",0.963740264624,4.64456788141e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017920_T001","Zm00001d017920","sp|Q6YWR4|HOX16_ORYSJ Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1//8.93554e-115",0.957964233856,9.63103590657e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038155_T001","Zm00001d038155","sp|Q93W28|Y4554_ARATH Uncharacterized protein At4g15545 OS=Arabidopsis thaliana GN=At4g15545 PE=1 SV=1//7.57644e-77",0.973648619812,9.57408625712e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002038_T003","Zm00001d002038","sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2//0",0.952996348584,1.66946908031E-6]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G801074_T01","GRMZM5G801074","sp|A1E9U5|RK33_SORBI 50S ribosomal protein L33, chloroplastic OS=Sorghum bicolor GN=rpl33 PE=3 SV=1//9.37866e-42",0.967257600865,2.80513931417e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003252_T007","Zm00001d003252","sp|P37830|G6PD_SOLTU Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Solanum tuberosum GN=G6PDH PE=2 SV=1//2.15011e-66",0.966238962482,3.26387943339e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042341_T001","Zm00001d042341","sp|Q9LK32|Y3721_ARATH Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1//1.34868e-11",0.976462358324,5.46954757041e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018598_T003","Zm00001d018598","sp|Q69LA1|PROT2_ORYSJ Probable proline transporter 2 OS=Oryza sativa subsp. japonica GN=LOC_Os07g01090 PE=2 SV=1//0",0.992452709626,1.90429894076E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000183_T001","Zm00001d000183","sp|Q07423|HEX6_RICCO Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1//0",0.971271526538,1.46860307915e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030638_T002","Zm00001d030638","sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana GN=PPD1 PE=1 SV=1//3.97365e-96",0.963162539521,5.02165084626e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005812_T001","Zm00001d005812","sp|Q9JIC3|DCR1A_MOUSE DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=2 SV=2//5.15074e-47",0.98210919701,1.40089513323e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001799_T003","Zm00001d001799","sp|Q14691|PSF1_HUMAN DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1//6.31202e-31",0.988224699434,1.74810743658e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010679_T001","Zm00001d010679","sp|Q13U36|PRMA_BURXL Ribosomal protein L11 methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=prmA PE=3 SV=1//1.53358e-51",0.962166367874,5.72871009963e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021255_T001","Zm00001d021255","sp|Q9LDQ3|CRK35_ARATH Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=3//1.72435e-136",0.967793224238,2.58541781095e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044745_T008","Zm00001d044745","sp|C5Z7K4|SYAP_SORBI Alanine--tRNA ligase, chloroplastic/mitochondrial OS=Sorghum bicolor GN=Sb10g008780 PE=3 SV=1//3.9654e-30",0.951509429944,1.94585595326e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002129_T001","Zm00001d002129","sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=2 SV=1//2.12546e-13",0.97496119484,7.43203862896e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002129_T003","Zm00001d002129","sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=2 SV=1//2.12546e-13",0.974165871789,8.67816107863e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002129_T004","Zm00001d002129","sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=2 SV=1//2.12546e-13",0.984614974223,6.615656023E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039578_T004","Zm00001d039578","sp|O82413|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At3g46100 PE=2 SV=1//3.63646e-24",0.97825117956,3.6950579263e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006760_T001","Zm00001d006760","sp|P80639|IF5A_MAIZE Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2//9.56357e-113",0.956482674523,1.14234959825e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011183_T001","Zm00001d011183","sp|Q41738|THI41_MAIZE Thiamine thiazole synthase 1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1//0",0.96720342343,2.8281653508E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025526_T001","Zm00001d025526","sp|Q9C7Z9|SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2//5.03363e-07",0.975402291588,6.8051158042e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034828_T001","Zm00001d034828","sp|P74142|RS1B_SYNY3 30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1b PE=3 SV=1//1.30499e-13",0.989147340974,1.16428600094e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038097_T002","Zm00001d038097","sp|Q1KPV0|FZL_ARATH Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana GN=FZL PE=1 SV=1//1.7446e-47",0.953603171164,1.56606237445E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025526_T004","Zm00001d025526","sp|Q9C7Z9|SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2//5.03363e-07",0.983470965188,9.45118161511e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020445_T001","Zm00001d020445","sp|O05525|YDIL_BACSU Putative membrane peptidase YdiL OS=Bacillus subtilis (strain 168) GN=ydiL PE=3 SV=1//3.8825e-07",0.995294967836,1.80158110652e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028436_T001","Zm00001d028436","sp|Q8W4S4|VHAA3_ARATH V-type proton ATPase subunit a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1 SV=1//0",0.9566221471,1.12442620659e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013361_T001","Zm00001d013361","sp|Q9CR14|FANCL_MOUSE E3 ubiquitin-protein ligase FANCL OS=Mus musculus GN=Fancl PE=1 SV=1//9.61942e-56",0.975147247788,7.1622316522e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045144_T001","Zm00001d045144","sp|O23342|SECE1_ARATH Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1//7.68234e-15",0.982314759557,1.32269926123E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046112_T003","Zm00001d046112","sp|Q94BN2|SPSY_ARATH Spermine synthase OS=Arabidopsis thaliana GN=SPMS PE=1 SV=1//2.17305e-170",0.955031592333,1.3426329657E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024966_T001","Zm00001d024966","sp|Q4KM49|SYYC_RAT Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Yars PE=2 SV=3//4.16586e-42",0.979799385266,2.56091572393e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033404_T002","Zm00001d033404","sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1//2.92959e-14",0.984704732183,6.42587894006e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033404_T001","Zm00001d033404","sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1//2.92959e-14",0.951244737867,1.99864895389e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031799_T001","Zm00001d031799","sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=2 SV=1//9.1651e-109",0.967318872752,2.77927801218e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052253_T001","Zm00001d052253","sp|Q9CA63|FBK29_ARATH F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana GN=At1g74510 PE=2 SV=1//1.50341e-150",-0.956822667504,1.09904964377e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040467_T002","Zm00001d040467",null,0.993185222832,1.14437792575E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053861_T002","Zm00001d053861","sp|B9F2U5|GUFP_ORYSJ Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0157700 PE=3 SV=1//5.07271e-62",0.965441229956,3.66320779044e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037104_T008","Zm00001d037104","sp|Q8S904|MFDX2_ARATH Adrenodoxin-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=MFDX2 PE=2 SV=1//1.66981e-68",0.962172601958,5.72405221888e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021645_T001","Zm00001d021645","sp|A3BKF2|LTD_ORYSJ Protein LHCP TRANSLOCATION DEFECT OS=Oryza sativa subsp. japonica GN=LTD PE=2 SV=1//3.33503e-83",0.968697208608,2.24580553709e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032420_T001","Zm00001d032420","sp|P93014|RR5_ARATH 30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana GN=rps5 PE=2 SV=1//2.02681e-73",0.981896522067,1.48563303881E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008203_T003","Zm00001d008203","sp|Q9AR38|PPOC_ORYSJ Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=PPOX1 PE=2 SV=1//4.66146e-39",0.980272820163,2.27636911543E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034857_T001","Zm00001d034857","sp|Q851Y7|GRXS7_ORYSJ Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXS7 PE=2 SV=1//3.90856e-70",0.992699144301,1.61371804808e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028549_T001","Zm00001d028549",null,0.974475652867,8.17444556489e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034538_T001","Zm00001d034538","sp|P73068|RUBR_SYNY3 Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rub PE=3 SV=1//1.07203e-24",0.971415648238,1.43248107598E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041954_T004","Zm00001d041954","sp|Q9LTR2|TGD2_ARATH Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic OS=Arabidopsis thaliana GN=TGD2 PE=2 SV=1//3.30174e-28",0.982378424858,1.2992008358E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005795_T002","Zm00001d005795","sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1//5.77324e-94",-0.967165153099,2.84452110649e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024317_T001","Zm00001d024317","sp|Q9LIS1|CR26L_ARATH Protein ECERIFERUM 26-like OS=Arabidopsis thaliana GN=CER26L PE=2 SV=1//1.14473e-33",0.970584109273,1.6510056966e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029557_T001","Zm00001d029557","sp|Q75GT3|CLPB2_ORYSJ Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPB2 PE=2 SV=1//0",0.956803672748,1.10143381304E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046748_T001","Zm00001d046748","sp|P43309|PPO_MALDO Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1//4.47154e-154",0.961819416446,5.99272925728E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032127_T004","Zm00001d032127","sp|Q9LYR5|FKB19_ARATH Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1//1.9127e-82",0.965867454998,3.44529266449E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001860_T001","Zm00001d001860","sp|Q680K2|GPPL1_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana GN=At4g39970 PE=2 SV=1//5.38221e-134",0.985673158771,4.64092231311e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042583_T001","Zm00001d042583","sp|A7ZE19|RF2_CAMC1 Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) GN=prfB PE=3 SV=1//1.97476e-13",0.961515213152,6.2320916161E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012632_T001","Zm00001d012632",null,0.989011418697,1.23876287006e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032925_T001","Zm00001d032925","sp|Q7XEJ5|MTND4_ORYSJ 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Oryza sativa subsp. japonica GN=ARD4 PE=2 SV=1//2.18162e-107",0.957057309513,1.06993449434E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021518_T002","Zm00001d021518","sp|Q0WRJ7|FK202_ARATH Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1//5.27782e-87",0.971198724123,1.4871235221E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019306_T001","Zm00001d019306","sp|Q8H3C7|ILL9_ORYSJ IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2//0",-0.960042786343,7.50036623858E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039477_T001","Zm00001d039477","sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) GN=CT0009 PE=3 SV=1//9.94763e-88",0.956883572619,1.09143262073e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021340_T001","Zm00001d021340","sp|Q67YC9|Y4141_ARATH Uncharacterized protein At4g14100 OS=Arabidopsis thaliana GN=At4g14100 PE=2 SV=1//4.32772e-44",0.967403500485,2.74387106369E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036014_T001","Zm00001d036014","sp|Q4JHE0|XB36_ORYSJ Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica GN=XBOS36 PE=2 SV=1//6.34917e-134",0.956734135428,1.11019700233e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035169_T001","Zm00001d035169",null,0.972081304696,1.2747053324E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006037_T001","Zm00001d006037","sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1//2.32004e-67",0.979585150132,2.69865292335e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022861_T001","Zm00001d022861",null,0.974589157682,7.9958264898e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045605_T001","Zm00001d045605","sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EDD1 PE=1 SV=1//0",0.959082857578,8.43193601163e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026543_T008","Zm00001d026543","sp|Q7XPK1|C3H31_ORYSJ Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN=Os04g0665700 PE=2 SV=1//2.93395e-127",0.96808970603,2.46982261976e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013729_T002","Zm00001d013729","sp|O74944|POLK_SCHPO DNA polymerase kappa OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug40 PE=1 SV=3//8.42408e-68",0.964611613739,4.11874942596e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038747_T001","Zm00001d038747",null,0.969118870667,2.10005924206E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045962_T001","Zm00001d045962",null,0.983517312572,9.32014176946e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013295_T001","Zm00001d013295",null,0.976857764121,5.02865702412e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019180_T001","Zm00001d019180","sp|Q9LHK1|NUD16_ARATH Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1//1.91642e-45",0.983927939424,8.22127699251e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014716_T002","Zm00001d014716",null,0.965945383897,3.40658989462e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015470_T001","Zm00001d015470",null,0.95400219623,1.50088366668e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038653_T002","Zm00001d038653","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//3.98983e-27",0.951490168917,1.94965984601E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038653_T001","Zm00001d038653","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//3.98983e-27",0.988162267105,1.7947561215E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034561_T002","Zm00001d034561",null,0.962840036876,5.24249112788E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044194_T001","Zm00001d044194","sp|Q9M157|ETC3_ARATH MYB-like transcription factor ETC3 OS=Arabidopsis thaliana GN=ETC3 PE=2 SV=1//3.5021e-15",0.97350073246,9.84332260145e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050150_T001","Zm00001d050150","sp|Q0J6P7|KAD5_ORYSJ Probable adenylate kinase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0288200 PE=2 SV=2//2.14754e-121",0.971443059242,1.42569168471e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038130_T007","Zm00001d038130",null,0.959436105489,8.0790213941E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050150_T003","Zm00001d050150","sp|Q0J6P7|KAD5_ORYSJ Probable adenylate kinase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0288200 PE=2 SV=2//2.14754e-121",0.981595462256,1.61252549091E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039451_T006","Zm00001d039451","sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mrnC PE=3 SV=1//8.71969e-07",0.954522084473,1.41921197994e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039451_T007","Zm00001d039451","sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mrnC PE=3 SV=1//8.71969e-07",0.980563137233,2.1147557927e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039451_T004","Zm00001d039451","sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mrnC PE=3 SV=1//8.71969e-07",0.959029120841,8.48667807141e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G800096_T01","GRMZM5G800096","sp|P11647|NU4C_MAIZE NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Zea mays GN=ndhD PE=3 SV=2//0",0.958017115009,9.57146596869e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050130_T004","Zm00001d050130","sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2//6.98846e-64",0.964025495159,4.46689371936e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009605_T002","Zm00001d009605","sp|Q9FRL3|ERDL6_ARATH Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1//1.05659e-140",0.983857591982,8.40179037453e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018066_T001","Zm00001d018066",null,0.979108580932,3.02627298776e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007639_T001","Zm00001d007639","sp|Q8YZH7|DER_NOSS1 GTPase Der OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=der PE=3 SV=1//6.24696e-10",0.981954825985,1.46200658246E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007639_T002","Zm00001d007639","sp|Q8YZH7|DER_NOSS1 GTPase Der OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=der PE=3 SV=1//6.24696e-10",0.968519832776,2.30946841207e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039058_T001","Zm00001d039058",null,0.957105879436,1.06398502409E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000310_T001","Zm00001d000310","sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1//1.66985e-27",0.981042848912,1.86786084377e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011070_T001","Zm00001d011070","sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1//2.40552e-146",0.979264580014,2.91572388456E-8]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G804708_T01","GRMZM5G804708","sp|P26567|CLPP_MAIZE ATP-dependent Clp protease proteolytic subunit OS=Zea mays GN=clpP PE=3 SV=2//3.42673e-146",0.957943866863,9.65405743791e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011532_T003","Zm00001d011532","sp|Q93VQ0|VCL1_ARATH Protein VACUOLELESS1 OS=Arabidopsis thaliana GN=VCL1 PE=1 SV=1//0",-0.968453863104,2.33350890011E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024403_T001","Zm00001d024403",null,0.976241533173,5.72884979455e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027369_T004","Zm00001d027369","sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0117800 PE=2 SV=1//4.03104e-07",0.9613811673,6.33994726496e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051416_T001","Zm00001d051416","sp|Q39108|GGR_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana GN=GGR PE=1 SV=2//1.13866e-82",0.960700476953,6.91076656345e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048422_T001","Zm00001d048422","sp|Q94AQ8|PNSB2_ARATH Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana GN=PNSB2 PE=2 SV=1//1.15313e-106",0.976555432397,5.36309858745E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034359_T001","Zm00001d034359","sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1//7.81034e-08",0.953213211835,1.6319106555e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018595_T005","Zm00001d018595","sp|Q8S4F6|SQD2_ARATH Sulfoquinovosyl transferase SQD2 OS=Arabidopsis thaliana GN=SQD2 PE=1 SV=1//8.8098e-06",0.963149827595,5.03021313492e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027369_T001","Zm00001d027369","sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0117800 PE=2 SV=1//4.03104e-07",0.98025377888,2.28730332452e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011450_T005","Zm00001d011450","sp|Q9ZUE0|PEK12_ARATH Proline-rich receptor-like protein kinase PERK12 OS=Arabidopsis thaliana GN=PERK12 PE=2 SV=2//2.44507e-165",0.977052430342,4.82226498733E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034192_T001","Zm00001d034192","sp|Q9XJ27|RR9_ARATH 30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1//2.30495e-68",0.99551881623,1.41242573193E-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027542_T002","Zm00001d027542","sp|Q96324|GSTFB_ARATH Glutathione S-transferase F11 OS=Arabidopsis thaliana GN=GSTF11 PE=2 SV=1//1.3526e-63",0.987039901544,2.81765633048E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020737_T001","Zm00001d020737","sp|R4X247|TCEB4_TULGE Probable tuliposide A-converting enzyme b6, amyloplastic OS=Tulipa gesneriana GN=TCEA-B6 PE=2 SV=1//1.0852e-82",0.953862142427,1.52351063409e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022544_T002","Zm00001d022544","sp|Q93WI0|STR12_ARATH Rhodanese-like/PpiC domain-containing protein 12 OS=Arabidopsis thaliana GN=At5g19370 PE=2 SV=1//3.42391e-06",0.969214433887,2.0680993007e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049694_T004","Zm00001d049694","sp|A3BLC3|RRFC_ORYSJ Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0570700 PE=2 SV=2//1.30565e-125",0.973170941303,1.04654616528E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048943_T001","Zm00001d048943","sp|P73920|TXLA_SYNY3 Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=txlA PE=3 SV=1//1.02027e-12",0.952564741003,1.74625901161e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024596_T005","Zm00001d024596","sp|Q9XGP7|OMT15_ORYSJ Tricin synthase 1 OS=Oryza sativa subsp. japonica GN=ROMT-15 PE=1 SV=1//6.36274e-14",0.957983959573,9.60878081102e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005812_T003","Zm00001d005812","sp|Q9JIC3|DCR1A_MOUSE DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=2 SV=2//5.15074e-47",0.95835008214,9.20306971963E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018030_T002","Zm00001d018030",null,0.984134697091,7.70857111476e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018030_T003","Zm00001d018030",null,0.987649530854,2.21670148903e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018069_T001","Zm00001d018069","sp|Q07300|ATPD_SORBI ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1//2.39401e-94",0.960294624634,7.27006193468E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004472_T001","Zm00001d004472","sp|Q8R1R3|STAR7_MOUSE StAR-related lipid transfer protein 7, mitochondrial OS=Mus musculus GN=Stard7 PE=2 SV=2//5.78177e-11",0.956956596798,1.08235526053e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019343_T001","Zm00001d019343",null,0.968208291594,2.42475552747e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032739_T006","Zm00001d032739","sp|Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1//1.94082e-13",0.964679580012,4.07981751493e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026494_T001","Zm00001d026494","sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=1 SV=2//4.65475e-21",0.966326283123,3.22236321404e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023431_T001","Zm00001d023431","sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1//0",0.977043462695,4.83162192477e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023343_T001","Zm00001d023343","sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1//1.6709e-42",0.978947200918,3.1441255155e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052411_T002","Zm00001d052411","sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1//3.04613e-07",-0.965385644983,3.69241592448e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031850_T001","Zm00001d031850","sp|Q9SL05|PGR5_ARATH Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana GN=PGR5 PE=1 SV=1//5.24718e-46",0.99105664748,4.43882264278e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023339_T002","Zm00001d023339","sp|Q8LG98|OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=2//1.25838e-12",0.952253336267,1.80338262146E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025845_T001","Zm00001d025845","sp|Q8LDV3|Y4320_ARATH Uncharacterized protein At4g13200, chloroplastic OS=Arabidopsis thaliana GN=At4g13200 PE=2 SV=2//3.35743e-17",0.972978205183,1.08432937296E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015504_T004","Zm00001d015504","sp|Q6ETK3|P2C11_ORYSJ Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1//8.84921e-82",-0.963036090486,5.10733989531e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040422_T002","Zm00001d040422","sp|Q3EAQ5|PTR36_ARATH Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2//2.50553e-29",0.978071935235,3.84869425218e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053845_T001","Zm00001d053845",null,0.986928968042,2.9397824175E-9]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G838396_T01","GRMZM5G838396","sp|A1E9W3|RR3_SORBI 30S ribosomal protein S3, chloroplastic OS=Sorghum bicolor GN=rps3 PE=3 SV=1//1.38432e-158",0.950015161758,2.25898571449E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008663_T002","Zm00001d008663","sp|Q54TH4|GET4_DICDI Golgi to ER traffic protein 4 homolog OS=Dictyostelium discoideum GN=DDB_G0281815 PE=3 SV=1//3.39214e-29",0.96931131012,2.03609651361E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042210_T001","Zm00001d042210","sp|Q0JG98|PIR7A_ORYSJ Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=3 SV=2//6.73508e-81",-0.963924639019,4.52908953281e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025687_T002","Zm00001d025687","sp|Q7XK25|PCH2_ORYSJ Pachytene checkpoint protein 2 homolog OS=Oryza sativa subsp. japonica GN=CRC1 PE=1 SV=4//1.60691e-117",-0.969598398517,1.94356545356E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011069_T001","Zm00001d011069","sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1//5.73668e-136",0.974416556327,8.26869381854e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011069_T004","Zm00001d011069","sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1//5.73668e-136",0.980594798299,2.09769950299E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023990_T001","Zm00001d023990","sp|Q9SLN8|DBR_TOBAC 2-alkenal reductase (NADP(+)-dependent) OS=Nicotiana tabacum GN=DBR PE=1 SV=1//1.38016e-163",0.974373231529,8.3383372651e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039745_T001","Zm00001d039745","sp|Q942P9|P2C01_ORYSJ Probable protein phosphatase 2C 1 OS=Oryza sativa subsp. japonica GN=Os01g0164600 PE=2 SV=1//6.79427e-42",0.985109508896,5.6232436485e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044099_T002","Zm00001d044099","sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1//8.20401e-108",0.979079853879,3.04698981601e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009028_T002","Zm00001d009028","sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1//0",0.951132310825,2.021413402e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044099_T004","Zm00001d044099","sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1//8.20401e-108",0.955607948043,1.25999913392e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048515_T003","Zm00001d048515",null,0.976939059389,4.94162617493e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013389_T021","Zm00001d013389","sp|O65902|ACAP1_ARATH Cyclase-associated protein 1 OS=Arabidopsis thaliana GN=CAP1 PE=2 SV=1//1.63432e-08",-0.961615590278,6.15228529448e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047789_T001","Zm00001d047789","sp|P31853|ATPX_SPIOL ATP synthase subunit b&apos;, chloroplastic OS=Spinacia oleracea GN=ATPG PE=1 SV=2//6.57836e-45",0.97263763255,1.15374418241E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005950_T001","Zm00001d005950","sp|Q9FMF7|DIT21_ARATH Dicarboxylate transporter 2.1, chloroplastic OS=Arabidopsis thaliana GN=DIT2-1 PE=1 SV=1//0",0.979075893841,3.04985450228e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053374_T001","Zm00001d053374","sp|Q42440|PAI1_ARATH N-(5&apos;-phosphoribosyl)anthranilate isomerase 1, chloroplastic OS=Arabidopsis thaliana GN=PAI1 PE=2 SV=1//7.73316e-88",0.985796053695,4.44617542783e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011513_T001","Zm00001d011513","sp|O22386|RK12_ORYSJ 50S ribosomal protein L12, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL12-2 PE=2 SV=2//1.74381e-48",0.98426448273,7.39999928001E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033896_T001","Zm00001d033896","sp|Q6AVG6|ISPH_ORYSJ 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPH PE=2 SV=1//0",0.968695522832,2.24640394286e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017092_T001","Zm00001d017092","sp|P46280|EFTU2_SOYBN Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1//0",0.963600410039,4.73371352783E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044335_T001","Zm00001d044335",null,0.991327545539,3.80778963915E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038362_T002","Zm00001d038362","sp|P93394|UPP_TOBAC Uracil phosphoribosyltransferase OS=Nicotiana tabacum GN=UPP PE=2 SV=1//1.454e-10",0.959245157836,8.2683000846e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046135_T001","Zm00001d046135","sp|Q9MAH3|DJ1B_ARATH Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=1 SV=1//6.00371e-26",0.980013009613,2.42921074367E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051291_T005","Zm00001d051291","sp|Q6Z7H3|CCT12_ORYSJ Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2//3.63464e-36",0.952669366634,1.72739229942e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000709_T001","Zm00001d000709",null,0.983191961653,1.02714214911E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037693_T003","Zm00001d037693","sp|P43279|MAOC_ORYSJ NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2//0",0.961764768176,6.03518166775e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049440_T005","Zm00001d049440","sp|Q0J7J7|CAF2M_ORYSJ CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2//1.27513e-34",0.970303670144,1.73040256346e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043305_T009","Zm00001d043305","sp|Q29L43|MON2_DROPS Protein MON2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=mon2 PE=3 SV=2//4.31824e-39",-0.9604526622,7.12843163533e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006137_T001","Zm00001d006137","sp|O22822|U74F2_ARATH UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana GN=UGT74F2 PE=1 SV=1//2.65034e-124",0.957858946677,9.75051714924e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017907_T001","Zm00001d017907","sp|Q9FM67|TI205_ARATH Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana GN=TIC20-V PE=2 SV=1//5.11652e-39",0.992705890188,1.60629287649e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045373_T001","Zm00001d045373","sp|Q0J6P7|KAD5_ORYSJ Probable adenylate kinase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0288200 PE=2 SV=2//5.25489e-06",0.981144249913,1.81874644234e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040464_T001","Zm00001d040464","sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1//6.23257e-35",0.980043766067,2.4107020602e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037449_T002","Zm00001d037449","sp|Q8W566|Y3514_ARATH Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana GN=At3g15140 PE=2 SV=1//4.1838e-110",0.95715806367,1.05762212987E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029027_T001","Zm00001d029027","sp|P51204|YCF54_PORPU Uncharacterized protein ycf54 OS=Porphyra purpurea GN=ycf54 PE=3 SV=1//7.44529e-11",0.959851849033,7.67880946384e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010852_T004","Zm00001d010852","sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1//0",0.9679097674,2.53947659568e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018330_T003","Zm00001d018330","sp|F4I532|PRFB2_ARATH Peptide chain release factor PrfB2, chloroplastic OS=Arabidopsis thaliana GN=PRFB2 PE=3 SV=1//1.84988e-53",0.982129255101,1.39310663005E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007750_T001","Zm00001d007750","sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1//6.22287e-10",0.953490763124,1.5848231536e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018941_T001","Zm00001d018941","sp|Q6VBB2|HFA2B_ORYSJ Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1//0",-0.970223549086,1.75363523233e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022107_T001","Zm00001d022107",null,0.978745816793,3.2962929053e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005118_T001","Zm00001d005118","sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2//1.1582e-13",0.955146195763,1.32586885337e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042018_T002","Zm00001d042018","sp|Q946Y7|SYP61_ARATH Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1//1.47738e-24",0.978798456464,3.25596336559e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045657_T001","Zm00001d045657","sp|Q8VY81|NUD21_ARATH Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1//4.97427e-43",0.966191372101,3.28668450456e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005346_T001","Zm00001d005346","sp|Q94A68|Y1669_ARATH Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=2 SV=1//1.05655e-20",0.975619028125,6.51291929277e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024718_T004","Zm00001d024718","sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 SV=1//3.20605e-18",0.990040079942,7.5911366082e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000316_T001","Zm00001d000316","sp|P16243|MAOC_MAIZE NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1//0",0.953484091001,1.58594230437e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027841_T002","Zm00001d027841","sp|Q9ZTP5|RPE_ORYSJ Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica GN=RPE PE=1 SV=2//8.10026e-127",0.964117652214,4.41065796108E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025203_T001","Zm00001d025203","sp|B0JW21|RSGA_MICAN Putative ribosome biogenesis GTPase RsgA OS=Microcystis aeruginosa (strain NIES-843) GN=rsgA PE=3 SV=1//6.72109e-55",0.970279961203,1.737251758e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024718_T001","Zm00001d024718","sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 SV=1//3.20605e-18",0.98291426125,1.11432507666E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034318_T001","Zm00001d034318","sp|P37518|YCHF_BACSU Ribosome-binding ATPase YchF OS=Bacillus subtilis (strain 168) GN=ychF PE=3 SV=1//2.11142e-139",0.974580913512,8.00869441875e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008228_T001","Zm00001d008228",null,0.971033113479,1.52994667157E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029965_T001","Zm00001d029965","sp|Q336R9|MSRA4_ORYSJ Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRA4 PE=2 SV=2//1.79232e-120",0.978679074706,3.34799834523E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032926_T001","Zm00001d032926","sp|Q9M7I7|CLH2_ARATH Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1//5.39845e-75",0.990259019088,6.79516887203e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044599_T004","Zm00001d044599","sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2//0",0.985129405396,5.5859616932e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005785_T013","Zm00001d005785","sp|Q8VYD6|PP374_ARATH Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana GN=CBSPPR1 PE=2 SV=1//6.10646e-43",0.950312590522,2.19367984466E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005785_T015","Zm00001d005785","sp|Q8VYD6|PP374_ARATH Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana GN=CBSPPR1 PE=2 SV=1//6.10646e-43",0.96861035963,2.27680004627e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006700_T005","Zm00001d006700",null,0.950189842583,2.22044736353e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030947_T002","Zm00001d030947","sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780 OS=Arabidopsis thaliana GN=At3g50780 PE=2 SV=1//1.55227e-104",0.953732164645,1.54475110481e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011424_T012","Zm00001d011424","sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1//1.8026e-46",0.97598003956,6.04847381069e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003644_T002","Zm00001d003644","sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1//1.24967e-82",-0.972719911984,1.13665898103e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041949_T001","Zm00001d041949","sp|Q9SVM8|RBG2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=RBG2 PE=1 SV=1//2.31858e-13",0.95003610922,2.25433646972e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053652_T002","Zm00001d053652","sp|Q944B0|FK161_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1//4.41016e-65",0.981500034594,1.65450102507e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052519_T003","Zm00001d052519","sp|W5EP13|CA1P_WHEAT 2-carboxy-D-arabinitol-1-phosphatase OS=Triticum aestivum PE=1 SV=1//5.27356e-07",0.970705299558,1.61760533857E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012834_T003","Zm00001d012834","sp|Q4G2J4|DER21_MAIZE Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2//3.06413e-162",-0.957302688205,1.04014563168E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002835_T005","Zm00001d002835","sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=2 SV=1//1.18276e-152",-0.953279684633,1.62053355581e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028245_T001","Zm00001d028245","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//0",0.960278920871,7.28425654906e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002711_T003","Zm00001d002711","sp|Q7XSN8|SRR_ORYSJ Serine racemase OS=Oryza sativa subsp. japonica GN=SERR PE=1 SV=2//2.35464e-22",0.95507328156,1.33651534107E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042697_T002","Zm00001d042697","sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea GN=PSBS PE=1 SV=1//3.79799e-89",0.976336177237,5.6165422091e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002789_T001","Zm00001d002789","sp|Q8LPS6|PPR3_ARATH Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2//1.56755e-144",0.981062373065,1.85832291777E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010585_T006","Zm00001d010585","sp|Q0GZS3|USP_CUCME UDP-sugar pyrophosphorylase OS=Cucumis melo GN=USP PE=1 SV=1//1.2604e-07",0.95712465257,1.06169250014E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014253_T001","Zm00001d014253",null,0.976716129088,5.18319942522e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005751_T002","Zm00001d005751","sp|Q9LMP7|GOS11_ARATH Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1//4.18675e-92",0.976881270597,5.00336758691e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007417_T001","Zm00001d007417","sp|Q55750|MFD_SYNY3 Transcription-repair-coupling factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mfd PE=3 SV=1//2.84613e-156",0.952661991634,1.7287168812e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018401_T001","Zm00001d018401","sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1//7.71156e-63",0.979609128537,2.68294955141e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018401_T002","Zm00001d018401","sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1//7.71156e-63",0.980611059335,2.08898218723e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006620_T001","Zm00001d006620","sp|Q8GZ79|TI201_ARATH Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1//1.1456e-48",0.953549954316,1.57492211317e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049687_T001","Zm00001d049687","sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=3 SV=1//7.6969e-54",0.968726176061,2.23554269319e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035515_T001","Zm00001d035515","sp|Q83Q35|ALX_SHIFL Inner membrane protein alx OS=Shigella flexneri GN=alx PE=3 SV=1//1.64647e-14",0.980009213053,2.4315032876e-08]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G830210_T01","GRMZM5G830210","sp|P46618|IF1C_MAIZE Translation initiation factor IF-1, chloroplastic OS=Zea mays GN=infA PE=3 SV=1//2.6926e-60",0.978194499346,3.74310196172e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015367_T001","Zm00001d015367","sp|Q10448|YDEF_SCHPO Uncharacterized protein C12B10.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC12B10.15c PE=4 SV=1//3.44519e-08",-0.966169128524,3.29738687979e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041819_T001","Zm00001d041819","sp|O65107|PSAN_MAIZE Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=2 SV=1//3.29813e-57",0.962420518639,5.5412431621e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007838_T001","Zm00001d007838","sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1//6.67497e-23",0.983302741041,9.93921345227e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038491_T001","Zm00001d038491","sp|Q5KQI6|NSI_ORYSJ Probable acetyltransferase NSI OS=Oryza sativa subsp. japonica GN=NSI PE=2 SV=1//6.1675e-87",0.966875582722,2.97072982658e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010198_T001","Zm00001d010198","sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1//6.98433e-136",0.981037022577,1.87071469426e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035588_T001","Zm00001d035588","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//1.08794e-169",0.962329330868,5.60793548487e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G839924_T01","GRMZM5G839924","sp|Q35322|NDUS3_ORYSJ NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Oryza sativa subsp. japonica GN=NAD9 PE=2 SV=2//2.3559e-127",0.960543452257,7.04806432328e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001847_T003","Zm00001d001847",null,0.979707603778,2.61922059597e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002089_T073","Zm00001d002089","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//0",0.953220674052,1.630630317e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026654_T001","Zm00001d026654","sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1//0",0.976791939334,5.1000169865e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052216_T001","Zm00001d052216","sp|Q9SWI6|RK29_MAIZE 50S ribosomal protein L29, chloroplastic OS=Zea mays GN=RPL29 PE=2 SV=1//1.86742e-84",0.977217560366,4.65253129356e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046766_T001","Zm00001d046766",null,0.965704704968,3.52724903285e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020220_T002","Zm00001d020220","sp|Q9M9V6|ICS2_ARATH Isochorismate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=ICS2 PE=2 SV=2//1.28154e-12",0.984823638895,6.18118800588e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041861_T001","Zm00001d041861","sp|Q8VXZ7|AGAL3_ARATH Alpha-galactosidase 3 OS=Arabidopsis thaliana GN=AGAL3 PE=1 SV=1//3.51804e-94",0.95777659696,9.84478651933e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020220_T001","Zm00001d020220","sp|Q9M9V6|ICS2_ARATH Isochorismate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=ICS2 PE=2 SV=2//1.28154e-12",0.973325114049,1.0170839726E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029482_T001","Zm00001d029482",null,0.979608645498,2.68326518782e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029482_T003","Zm00001d029482",null,0.980833057543,1.97283331893e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029482_T002","Zm00001d029482",null,0.988331508197,1.67054992062E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035002_T001","Zm00001d035002","sp|P27789|FER5_MAIZE Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1//6.23716e-66",0.970376954953,1.70936734101E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007978_T004","Zm00001d007978","sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1 PE=1 SV=1//0",-0.954588747154,1.40900013327e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017118_T001","Zm00001d017118","sp|Q8LDL0|HHL1_ARATH Protein HHL1, chloroplastic OS=Arabidopsis thaliana GN=HHL1 PE=1 SV=1//3.41152e-64",0.990681649446,5.44739586772e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009503_T001","Zm00001d009503",null,0.973636944224,9.59512655996e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031898_T001","Zm00001d031898","sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2//1.613e-63",-0.951323058115,1.9829110413e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053801_T001","Zm00001d053801","sp|Q94F00|IMPL1_ARATH Phosphatase IMPL1, chloroplastic OS=Arabidopsis thaliana GN=IMPL1 PE=1 SV=2//2.54019e-177",0.952568599511,1.74556033228E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044589_T001","Zm00001d044589",null,0.986144535131,3.92916810199e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027366_T002","Zm00001d027366","sp|Q10SM7|PX111_ORYSJ Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1//9.29918e-157",0.994955117534,2.55182541764e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027401_T008","Zm00001d027401","sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1//3.33328e-132",0.980605135179,2.09215467173e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027401_T006","Zm00001d027401","sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1//3.33328e-132",0.962675770412,5.35790471101e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017398_T001","Zm00001d017398","sp|Q84N38|PVIP_NICBE OBERON-like protein OS=Nicotiana benthamiana GN=PVIP PE=1 SV=1//0",-0.963971377176,4.50018210013e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029039_T001","Zm00001d029039","sp|Q9CAF5|AB6I_ARATH ABC transporter I family member 6, chloroplastic OS=Arabidopsis thaliana GN=ABCI6 PE=1 SV=1//2.41644e-122",0.959717624636,7.80625700969e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019249_T004","Zm00001d019249","sp|Q9FGP9|RER1_ARATH Protein RETICULATA-RELATED 1 OS=Arabidopsis thaliana GN=RER1 PE=2 SV=1//3.72668e-18",0.973512230525,9.8221761391e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019249_T003","Zm00001d019249","sp|Q9FGP9|RER1_ARATH Protein RETICULATA-RELATED 1 OS=Arabidopsis thaliana GN=RER1 PE=2 SV=1//3.72668e-18",0.957335199873,1.03624866243e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017250_T001","Zm00001d017250","sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1//1.48863e-161",0.986013847433,4.11709888404e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032230_T001","Zm00001d032230","sp|B1B1U3|ZSS1_ZINZE Alpha-humulene synthase OS=Zingiber zerumbet GN=ZSS1 PE=1 SV=1//1.67143e-112",0.96069353795,6.91678858189e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052622_T001","Zm00001d052622","sp|C5Y3V8|GATB_SORBI Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial OS=Sorghum bicolor GN=GATB PE=3 SV=1//6.63599e-131",0.968619125269,2.27365642758e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046629_T001","Zm00001d046629","sp|Q9SHU7|TIC21_ARATH Protein TIC 21, chloroplastic OS=Arabidopsis thaliana GN=TIC21 PE=1 SV=1//1.88392e-69",0.98176613016,1.53957437909E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043514_T001","Zm00001d043514","sp|Q9SZE1|3HID1_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial OS=Arabidopsis thaliana GN=At4g29120 PE=2 SV=1//4.93032e-139",0.960220310404,7.33742904435e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045327_T001","Zm00001d045327","sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1//2.92668e-105",0.986957788427,2.90765567179E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025129_T001","Zm00001d025129","sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1//1.3677e-74",0.962743233577,5.31026327799e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042590_T001","Zm00001d042590","sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1//3.97037e-89",0.973880902572,9.1630731891e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032353_T001","Zm00001d032353","sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1//0",0.968326086248,2.38063919245E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043680_T001","Zm00001d043680","sp|Q5NAI4|PLA5_ORYSJ Phospholipase A1-II 5 OS=Oryza sativa subsp. japonica GN=Os01g0710700 PE=2 SV=1//0",0.967565163617,2.67723143654E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018787_T001","Zm00001d018787","sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2//0",0.980299861437,2.2609126793e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030623_T001","Zm00001d030623","sp|Q2QNK7|S40A2_ORYSJ Solute carrier family 40 member 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0562100 PE=2 SV=1//8.02664e-06",0.966335372645,3.21806589376E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017147_T001","Zm00001d017147","sp|Q96288|BBX24_ARATH B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1//5.06308e-66",0.989071126746,1.20559207062e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051870_T001","Zm00001d051870","sp|Q8LL87|COMT1_COFCA Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1//1.28135e-64",0.98040830334,2.19976712401e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002208_T001","Zm00001d002208","sp|Q1G3K8|RIC7_ARATH CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1//5.72967e-15",0.967146555871,2.85249619925e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014597_T001","Zm00001d014597","sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1//1.0971e-09",0.963118870492,5.05111325211e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031203_T001","Zm00001d031203","sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1//1.32532e-44",0.952195174875,1.81421401524e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013534_T001","Zm00001d013534","sp|P0A3C8|FER1_NOSSO Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) GN=petF PE=1 SV=2//3.82599e-18",0.984844907938,6.13821438122e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013534_T002","Zm00001d013534","sp|P0A3C8|FER1_NOSSO Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) GN=petF PE=1 SV=2//3.82599e-18",0.979539271748,2.72890270381e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008625_T001","Zm00001d008625","sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2//2.77137e-180",0.96476777908,4.02973283631e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039415_T001","Zm00001d039415","sp|Q10PI6|LCAT1_ORYSJ Lecithin-cholesterol acyltransferase-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0232800 PE=2 SV=1//1.97509e-81",0.966689796283,3.05402205081e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032060_T001","Zm00001d032060","sp|Q7XAP4|RSH2_ORYSJ Probable GTP diphosphokinase RSH2, chloroplastic OS=Oryza sativa subsp. japonica GN=RSH2 PE=2 SV=1//0",0.956269958776,1.17012139644e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019411_T001","Zm00001d019411","sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1//0",0.987544212327,2.3124338E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003395_T004","Zm00001d003395","sp|Q7XUS2|ASB1_ORYSJ Anthranilate synthase beta subunit 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ASB1 PE=1 SV=1//1.08217e-121",0.952710130905,1.72008537858E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007366_T001","Zm00001d007366","sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 OS=Arabidopsis thaliana GN=At3g48420 PE=1 SV=1//2.18435e-133",0.954458225978,1.42904926004E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045877_T001","Zm00001d045877",null,0.981182364799,1.80055379495e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037489_T004","Zm00001d037489","sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1//2.01891e-53",0.952008857068,1.84925989788E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010047_T002","Zm00001d010047","sp|Q8L7E5|WIT1_ARATH WPP domain-interacting tail-anchored protein 1 OS=Arabidopsis thaliana GN=WIT1 PE=1 SV=2//1.06719e-81",-0.964744897509,4.04267912742e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024640_T002","Zm00001d024640","sp|P49307|MOCA_RHIML Rhizopine catabolism protein MocA OS=Rhizobium meliloti GN=mocA PE=3 SV=1//3.11491e-15",0.986645972049,3.27055404981E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044211_T001","Zm00001d044211","sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic OS=Pisum sativum GN=PGMP PE=2 SV=1//0",0.966822269182,2.9944442792e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025453_T006","Zm00001d025453","sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1//6.97686e-26",0.95399262736,1.50242106445E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007366_T003","Zm00001d007366","sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 OS=Arabidopsis thaliana GN=At3g48420 PE=1 SV=1//2.18435e-133",0.980818517408,1.98027936271e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044208_T001","Zm00001d044208","sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp. japonica GN=Os01g0618400 PE=2 SV=1//2.04987e-48",0.966978591808,2.92533347546e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011154_T001","Zm00001d011154","sp|Q06398|GSTU6_ORYSJ Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2//4.11243e-72",0.970290246441,1.73427784578E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015377_T001","Zm00001d015377","sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1//7.18994e-23",0.980923545841,1.92699438628e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039181_T001","Zm00001d039181","sp|O24621|SIGC_ARATH RNA polymerase sigma factor sigC OS=Arabidopsis thaliana GN=SIGC PE=2 SV=1//2.97789e-47",0.968315574467,2.38454990198E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031514_T001","Zm00001d031514",null,0.9891371008,1.16976917042e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020516_T002","Zm00001d020516","sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2//4.66969e-94",-0.961955566814,5.8879950479e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021060_T001","Zm00001d021060",null,0.990297545969,6.66227517598e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014035_T001","Zm00001d014035","sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1//2.66852e-10",0.98108066054,1.84942439141e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017706_T002","Zm00001d017706","sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1//1.80776e-177",0.956751182026,1.10804366305e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013741_T008","Zm00001d013741","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//3.51416e-154",0.962430345262,5.53409402748e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000350_T001","Zm00001d000350","sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays GN=SECY PE=2 SV=1//6.08807e-169",0.978830873681,3.23132347546e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038377_T001","Zm00001d038377","sp|B0BN95|HARB1_RAT Putative nuclease HARBI1 OS=Rattus norvegicus GN=Harbi1 PE=2 SV=1//6.66864e-16",-0.972512317037,1.18015805059E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043423_T001","Zm00001d043423","sp|A2WV68|PCF7_ORYSI Transcription factor PCF7 OS=Oryza sativa subsp. indica GN=PCF7 PE=3 SV=1//1.49068e-123",0.977018835805,4.85739235501e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038381_T001","Zm00001d038381","sp|Q6L500|H2A4_ORYSJ Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1//2.4945e-48",-0.952940809505,1.67919729115E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040489_T001","Zm00001d040489",null,0.969463544777,1.98660357942e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019627_T002","Zm00001d019627","sp|Q8LPQ6|AB28B_ARATH ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 PE=2 SV=1//0",0.988074901676,1.86169746286e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046683_T017","Zm00001d046683","sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2//4.86741e-28",0.977347322567,4.52252117977e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011797_T002","Zm00001d011797","sp|Q8RWM7|CCB3_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana GN=CCB3 PE=1 SV=1//3.66087e-50",0.994689082603,3.29798410803e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038831_T001","Zm00001d038831","sp|Q8H0Z6|IP5P3_ARATH Type IV inositol polyphosphate 5-phosphatase 3 OS=Arabidopsis thaliana GN=IP5P3 PE=1 SV=1//8.37548e-34",0.956724471213,1.11141926862E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029325_T002","Zm00001d029325","sp|Q9ZUU4|CP29B_ARATH RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana GN=CP29B PE=1 SV=1//1.10464e-74",0.973994617676,8.96705176778e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051180_T001","Zm00001d051180",null,-0.96447613527,4.19723429148E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000270_T004","Zm00001d000270","sp|P16023|RPOB_MAIZE DNA-directed RNA polymerase subunit beta OS=Zea mays GN=rpoB PE=3 SV=1//0",0.985804530002,4.4329879767e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038547_T001","Zm00001d038547","sp|Q6YZE2|GSA_ORYSJ Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Oryza sativa subsp. japonica GN=GSA PE=2 SV=1//0",0.951668129061,1.91473774036e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018234_T001","Zm00001d018234",null,0.998839466892,1.64313007645e-14]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000270_T001","Zm00001d000270","sp|P16023|RPOB_MAIZE DNA-directed RNA polymerase subunit beta OS=Zea mays GN=rpoB PE=3 SV=1//0",0.970502842927,1.67370868054e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007908_T001","Zm00001d007908","sp|Q9FG13|CXE15_ARATH Probable carboxylesterase 15 OS=Arabidopsis thaliana GN=CXE15 PE=2 SV=1//1.36323e-67",0.961891225622,5.93730689502e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018460_T003","Zm00001d018460","sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana GN=LUH PE=1 SV=1//3.69928e-60",0.954777560544,1.38039255448e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046044_T001","Zm00001d046044",null,0.963542874246,4.77078028194e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030976_T001","Zm00001d030976","sp|Q6YTF5|C76M5_ORYSJ Cytochrome P450 76M5 OS=Oryza sativa subsp. japonica GN=CYP76M5 PE=1 SV=1//1.42156e-154",0.975901569071,6.14710842228e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027966_T001","Zm00001d027966","sp|Q109R6|CUTA1_ORYSJ Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CUTA1 PE=1 SV=1//1.26763e-73",0.986353495649,3.64295860145E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013885_T001","Zm00001d013885","sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1//5.06947e-100",0.986130015347,3.94970278705e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015651_T001","Zm00001d015651","sp|Q38933|LCYB_ARATH Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1//0",0.955506676929,1.27421818741E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053997_T010","Zm00001d053997","sp|Q5Z9J0|MPK12_ORYSJ Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2//4.06229e-11",-0.954011187256,1.4994402469e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011256_T001","Zm00001d011256",null,0.971696462333,1.36413152774e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051632_T001","Zm00001d051632","sp|Q940Y3|ARID3_ARATH AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana GN=ARID3 PE=1 SV=1//8.28611e-91",0.95765864547,9.98107007488e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006447_T001","Zm00001d006447","sp|Q9LP65|CAR5_ARATH Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana GN=CAR5 PE=2 SV=1//4.79516e-44",0.959487613145,8.02855813831e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051740_T002","Zm00001d051740","sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic OS=Arabidopsis thaliana GN=SPPA PE=2 SV=1//8.29522e-48",0.954819552508,1.37409337198e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035318_T001","Zm00001d035318","sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1//4.35514e-25",0.958787716371,8.73609212748e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001883_T004","Zm00001d001883","sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1//8.10051e-77",0.975091909538,7.24165194477E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001883_T001","Zm00001d001883","sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1//8.10051e-77",0.975396046829,6.81368685918e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000408_T001","Zm00001d000408","sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1//1.66445e-152",-0.958458071337,9.08604043182e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045575_T001","Zm00001d045575","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//0",0.953812488978,1.53159727301e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021871_T003","Zm00001d021871","sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1//0",0.975388712367,6.82376453121e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021871_T001","Zm00001d021871","sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1//0",0.953860259751,1.52381663021e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029074_T001","Zm00001d029074","sp|O81220|DCUP_MAIZE Uroporphyrinogen decarboxylase, chloroplastic OS=Zea mays GN=LES22 PE=2 SV=1//3.05889e-19",0.966583041324,3.1027163061e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029074_T003","Zm00001d029074","sp|O81220|DCUP_MAIZE Uroporphyrinogen decarboxylase, chloroplastic OS=Zea mays GN=LES22 PE=2 SV=1//3.05889e-19",0.960761287065,6.85817047819e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001914_T003","Zm00001d001914","sp|Q7XR80|ARP8_ORYSJ Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1//0",0.973986286388,8.98129881577e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028542_T006","Zm00001d028542","sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1//2.24169e-43",0.969764197814,1.89167161935e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028542_T002","Zm00001d028542","sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1//2.24169e-43",-0.963609638019,4.72778987495e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031970_T001","Zm00001d031970","sp|P0A9T5|TAS_SHIFL Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1//6.8362e-42",0.974537835087,8.07620206267e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007267_T003","Zm00001d007267","sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=1 SV=1//5.83198e-17",0.959523372129,7.99367172455E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002993_T001","Zm00001d002993","sp|Q2V4B2|PQL3_ARATH PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=PQL3 PE=2 SV=1//1.45247e-25",0.980657909344,2.06402788194E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009983_T004","Zm00001d009983",null,0.969635458117,1.93186896702e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009983_T001","Zm00001d009983",null,0.982972356821,1.0956153762e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019703_T001","Zm00001d019703","sp|O66163|NHAD_VIBPH Na(+)/H(+) antiporter NhaD OS=Vibrio parahaemolyticus GN=nhaD PE=1 SV=1//4.84637e-20",0.973035656128,1.07295513363E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029552_T001","Zm00001d029552","sp|Q9LDD4|ARID2_ARATH AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana GN=ARID2 PE=2 SV=1//5.57315e-22",0.952524475295,1.75356337184e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037778_T001","Zm00001d037778","sp|Q55911|YC52L_SYNY3 Uncharacterized N-acetyltransferase ycf52-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0286 PE=3 SV=1//1.33342e-10",0.991932669646,2.65492072771e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053342_T003","Zm00001d053342",null,0.996364058432,4.97379915032e-12]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036521_T001","Zm00001d036521","sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1//3.70536e-74",0.987577683409,2.28165841776E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053223_T001","Zm00001d053223","sp|Q6ZJJ1|APX4_ORYSJ Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1//3.63812e-136",0.955716949856,1.2448356872E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023655_T001","Zm00001d023655","sp|B4FHU1|ZCIS_MAIZE 15-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays PE=1 SV=1//0",0.973141158171,1.05231519498E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034710_T004","Zm00001d034710","sp|Q10B98|C3H25_ORYSJ Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica GN=Os03g0826400 PE=2 SV=1//2.28445e-09",0.975235105832,7.03756624088e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029034_T002","Zm00001d029034","sp|Q9LVM1|AB25B_ARATH ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana GN=ABCB25 PE=1 SV=1//0",0.959982851572,7.55602053371e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026437_T001","Zm00001d026437",null,0.973107946825,1.05877810519E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040163_T001","Zm00001d040163","sp|Q8W250|DXR_ORYSJ 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2//2.98575e-08",0.962417114453,5.54372151296e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022535_T006","Zm00001d022535","sp|Q56XM9|PAPS3_ARATH Nuclear poly(A) polymerase 3 OS=Arabidopsis thaliana GN=PAPS3 PE=1 SV=1//1.74921e-27",0.95931612506,8.19754635728e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008597_T004","Zm00001d008597","sp|Q6NQ88|DDB2_ARATH Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana GN=DDB2 PE=1 SV=1//3.60485e-145",0.967599912036,2.66307728758e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021025_T001","Zm00001d021025","sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1//5.53838e-136",0.980176678487,2.33200605493e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007940_T002","Zm00001d007940","sp|P56333|IF5A1_SOLTU Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1//2.00172e-97",0.969294883113,2.04149519512e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016926_T002","Zm00001d016926","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//3.13791e-165",0.972514194277,1.17975884839E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041969_T001","Zm00001d041969","sp|Q0DLD3|T2AG_ORYSJ Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. japonica GN=TFIIAy PE=3 SV=1//2.19649e-58",0.950618487944,2.12808540745e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047495_T001","Zm00001d047495","sp|A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1//5.17836e-146",0.961275165966,6.42628359415e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013845_T012","Zm00001d013845","sp|Q4KMJ1|CHAC2_DANRE Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Danio rerio GN=chac2 PE=2 SV=1//3.12404e-34",0.987279190111,2.56799603804E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002696_T001","Zm00001d002696","sp|A4IJ27|ROGF3_ARATH Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana GN=ROPGEF3 PE=2 SV=1//4.02495e-155",-0.973660132406,9.5533756781e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021740_T001","Zm00001d021740",null,0.964547888703,4.15551966393e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050708_T002","Zm00001d050708","sp|Q3KQ62|WDR83_XENLA WD repeat domain-containing protein 83 OS=Xenopus laevis GN=wdr83 PE=2 SV=1//4.58063e-16",0.965824952436,3.4665481019E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043972_T001","Zm00001d043972","sp|O22386|RK12_ORYSJ 50S ribosomal protein L12, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL12-2 PE=2 SV=2//1.23665e-60",0.979472144968,2.77364902157e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040959_T002","Zm00001d040959",null,0.98617382693,3.88800081019E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002345_T001","Zm00001d002345","sp|Q9SAK0|PP132_ARATH Pentatricopeptide repeat-containing protein At1g79490, mitochondrial OS=Arabidopsis thaliana GN=EMB2217 PE=2 SV=1//0",0.96634219718,3.21484240562e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051790_T001","Zm00001d051790","sp|Q8W4A5|APO2_ARATH APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1//8.7313e-148",0.959597084805,7.92213769474e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022395_T001","Zm00001d022395","sp|Q5HZL9|HDHD3_XENLA Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1//8.89552e-15",0.963636712401,4.71044420802e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042840_T001","Zm00001d042840","sp|P46285|S17P_WHEAT Sedoheptulose-1,7-bisphosphatase, chloroplastic OS=Triticum aestivum PE=2 SV=1//0",0.962423525471,5.53905483258e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014919_T004","Zm00001d014919","sp|P13443|DHGY_CUCSA Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1//0",0.953916067129,1.51476678845e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018652_T001","Zm00001d018652","sp|Q9FLK4|GSXL8_ARATH Flavin-containing monooxygenase FMO GS-OX-like 8 OS=Arabidopsis thaliana GN=At5g61290 PE=2 SV=1//4.91477e-134",0.96402692067,4.46601953197e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000838_T001","Zm00001d000838",null,0.956029841139,1.20211194243e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015426_T001","Zm00001d015426","sp|P09469|VATA_DAUCA V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1//0",0.95222052036,1.80948760065e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031403_T001","Zm00001d031403","sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2//3.44214e-130",0.968864126417,2.18717916889e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012177_T001","Zm00001d012177","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//0",0.958800606835,8.72262858387e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001806_T008","Zm00001d001806","sp|P73625|MUTS2_SYNY3 Endonuclease MutS2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mutS2 PE=3 SV=1//5.60632e-97",0.965146905421,3.81997923959E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031496_T001","Zm00001d031496",null,0.991066930106,4.41343850355E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001806_T001","Zm00001d001806","sp|P73625|MUTS2_SYNY3 Endonuclease MutS2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mutS2 PE=3 SV=1//5.60632e-97",0.964697679825,4.06949922205e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016388_T001","Zm00001d016388",null,0.952839718464,1.69701977515e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015226_T001","Zm00001d015226","sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1//1.27359e-36",0.98549817011,4.92990714918e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052056_T002","Zm00001d052056","sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=1 SV=1//3.37469e-19",0.954358060205,1.44458854701E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028964_T002","Zm00001d028964",null,0.976492175629,5.43526386121e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007774_T001","Zm00001d007774","sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2//2.00863e-21",0.978945378713,3.14547681235e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040686_T001","Zm00001d040686","sp|Q9SYI0|SECA1_ARATH Protein translocase subunit SECA1, chloroplastic OS=Arabidopsis thaliana GN=SECA1 PE=2 SV=2//5.51867e-124",0.95083519251,2.0825656375e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024408_T001","Zm00001d024408","sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1//0",0.956374502507,1.15640616571E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011773_T002","Zm00001d011773","sp|Q5JNC0|COQ5_ORYSJ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1//1.9851e-32",0.972032816527,1.28570813329e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051908_T001","Zm00001d051908","sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1426 PE=3 SV=1//7.48953e-08",0.950117017775,2.23645018638e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044533_T003","Zm00001d044533","sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1//0",0.968367550442,2.36526295216e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005006_T003","Zm00001d005006","sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1//1.00282e-51",-0.954384561252,1.44046430666e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005006_T001","Zm00001d005006","sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1//1.00282e-51",-0.954848701861,1.36973413108E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050324_T002","Zm00001d050324",null,0.963964944834,4.50415175823e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044201_T008","Zm00001d044201","sp|A2ZVG7|FTSH9_ORYSJ ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1//6.10764e-28",0.956116881315,1.19043649338e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023311_T037","Zm00001d023311","sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1//7.94873e-65",0.96032515202,7.24253115481e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017676_T001","Zm00001d017676","sp|Q9C5C4|ARGE_ARATH Acetylornithine deacetylase OS=Arabidopsis thaliana GN=At4g17830 PE=2 SV=1//0",0.974139535005,8.72209977576e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019956_T002","Zm00001d019956","sp|Q940U6|FLU_ARATH Protein FLUORESCENT IN BLUE LIGHT, chloroplastic OS=Arabidopsis thaliana GN=FLU PE=1 SV=1//3.36293e-102",0.969421770577,2.00008838824E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005614_T002","Zm00001d005614","sp|A2RVV7|FOLD1_ARATH Bifunctional protein FolD 1, mitochondrial OS=Arabidopsis thaliana GN=FOLD1 PE=2 SV=1//5.49961e-133",0.96057189808,7.02303277311e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039366_T001","Zm00001d039366","sp|Q8VY22|TBL38_ARATH Protein trichome birefringence-like 38 OS=Arabidopsis thaliana GN=TBL38 PE=2 SV=1//9.13127e-108",0.967977722829,2.51298991394E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048134_T001","Zm00001d048134","sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2 SV=1//7.79694e-09",0.95660105798,1.12712190958E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019922_T003","Zm00001d019922","sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3 OS=Arabidopsis thaliana GN=EML3 PE=1 SV=1//2.47392e-56",0.982775271304,1.16012230933E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022179_T004","Zm00001d022179","sp|A2YNT8|SAPK2_ORYSI Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2//1.17057e-31",-0.962288963609,5.63766197711e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035212_T001","Zm00001d035212","sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1//0",0.973477507695,9.88614665687e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037323_T001","Zm00001d037323","sp|O04616|CUT1A_ARATH Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1//3.00324e-49",0.952215410713,1.81043965819E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052624_T002","Zm00001d052624","sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus GN=RCC1 PE=1 SV=1//1.42385e-08",0.961074391078,6.5923709025e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052624_T007","Zm00001d052624","sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus GN=RCC1 PE=1 SV=1//1.42385e-08",0.962355342581,5.58884652779e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018413_T008","Zm00001d018413","sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana GN=CLPP6 PE=1 SV=1//5.64111e-98",0.96268548796,5.35102146593e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049637_T001","Zm00001d049637",null,0.994879247543,2.74922307142e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037925_T007","Zm00001d037925","sp|O22315|SR34_ARATH Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana GN=SR34 PE=1 SV=1//2.45316e-49",0.973200481681,1.04084906472E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053782_T006","Zm00001d053782","sp|O48921|C97B2_SOYBN Cytochrome P450 97B2, chloroplastic OS=Glycine max GN=CYP97B2 PE=2 SV=1//1.30439e-38",0.965586459084,3.58776086617E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053782_T004","Zm00001d053782","sp|O48921|C97B2_SOYBN Cytochrome P450 97B2, chloroplastic OS=Glycine max GN=CYP97B2 PE=2 SV=1//1.30439e-38",0.958620748231,8.91197970532e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053782_T001","Zm00001d053782","sp|O48921|C97B2_SOYBN Cytochrome P450 97B2, chloroplastic OS=Glycine max GN=CYP97B2 PE=2 SV=1//1.30439e-38",0.985797766813,4.44350778395e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030581_T001","Zm00001d030581",null,0.972506052945,1.18149091399E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034969_T001","Zm00001d034969","sp|P51192|YCF52_PORPU Uncharacterized N-acetyltransferase ycf52 OS=Porphyra purpurea GN=ycf52 PE=3 SV=1//3.94185e-26",0.950829725926,2.08370434041e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014995_T001","Zm00001d014995","sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1//3.34755e-39",0.976099853887,5.9003077979e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019093_T001","Zm00001d019093","sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1//5.60131e-82",-0.96207705656,5.795771611e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G856777_T01","GRMZM5G856777","sp|P48187|PSBC_MAIZE Photosystem II CP43 reaction center protein OS=Zea mays GN=psbC PE=1 SV=1//0",0.969458880436,1.98810564012e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008529_T001","Zm00001d008529","sp|F4JJL0|ENDO4_ARATH Endonuclease 4 OS=Arabidopsis thaliana GN=ENDO4 PE=3 SV=1//3.27964e-113",0.988435581602,1.59764557139E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041308_T001","Zm00001d041308","sp|Q9M0Z3|KEA3_ARATH K(+) efflux antiporter 3, chloroplastic OS=Arabidopsis thaliana GN=KEA3 PE=2 SV=2//0",0.956907098201,1.08850167035e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043508_T002","Zm00001d043508","sp|Q8RXE9|SYWM_ARATH Tryptophan--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA4 PE=2 SV=1//6.34289e-57",0.961725086909,6.06615675913e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018498_T002","Zm00001d018498","sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium discoideum GN=DDB_G0284757 PE=3 SV=2//4.10998e-12",0.980577822152,2.10683110957E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018946_T001","Zm00001d018946","sp|Q6ZLC4|COAD1_ORYSJ Phosphopantetheine adenylyltransferase 1 OS=Oryza sativa subsp. japonica GN=Os07g0179400 PE=2 SV=1//2.18625e-71",0.973295942638,1.02260728774E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018498_T004","Zm00001d018498","sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium discoideum GN=DDB_G0284757 PE=3 SV=2//4.10998e-12",0.986312601319,3.69761732344e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014674_T001","Zm00001d014674","sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2//4.76817e-15",0.960861415409,6.7722605479e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048856_T003","Zm00001d048856","sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA7 PE=2 SV=1//0",0.965946306029,3.40613400596e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033150_T001","Zm00001d033150",null,0.986903309363,2.96862268101e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017298_T005","Zm00001d017298",null,-0.968088158281,2.47041519703E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039253_T001","Zm00001d039253","sp|Q9P7W0|OPA3_SCHPO OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1703.11 PE=3 SV=1//4.22188e-14",0.980099451766,2.37747757037e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043165_T001","Zm00001d043165","sp|O64733|U87A2_ARATH UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=1 SV=1//3.24618e-38",0.95281057955,1.70218476647e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052329_T002","Zm00001d052329",null,0.957324145443,1.03757238445E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038673_T004","Zm00001d038673","sp|Q80UY1|CARME_MOUSE Carnosine N-methyltransferase OS=Mus musculus PE=2 SV=1//3.39283e-73",0.964187804507,4.36822838568e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006251_T001","Zm00001d006251",null,0.958240062889,9.32352690386e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008962_T001","Zm00001d008962",null,0.973752533661,9.38843953691e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018142_T002","Zm00001d018142","sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1//4.59154e-109",0.95293671701,1.6799159066e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051020_T001","Zm00001d051020",null,0.981422186582,1.68938525391E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046700_T002","Zm00001d046700","sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1//3.52257e-75",0.970547969186,1.66107150923E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051069_T001","Zm00001d051069","sp|A2VEI2|MICU1_DROME Calcium uptake protein 1 homolog, mitochondrial OS=Drosophila melanogaster GN=CG4495 PE=2 SV=1//7.16954e-44",0.959347942897,8.16598080711e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038764_T001","Zm00001d038764","sp|Q4R1I9|ANGLT_ROSHC Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1//4.07985e-114",0.951968074889,1.85700206368e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025152_T001","Zm00001d025152","sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1//2.94842e-14",0.956088479586,1.19423632228e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032127_T001","Zm00001d032127","sp|Q9LYR5|FKB19_ARATH Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1//1.9127e-82",0.965625226003,3.56783181665E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029674_T001","Zm00001d029674","sp|Q9FJ81|CCB2_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana GN=CCB2 PE=1 SV=1//1.85921e-79",0.975560695528,6.59055852115e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018838_T002","Zm00001d018838",null,0.958239454199,9.32419680577e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042863_T002","Zm00001d042863",null,0.962286274142,5.639646945e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020825_T001","Zm00001d020825","sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1//6.60089e-18",0.954091774069,1.48655195753e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010240_T001","Zm00001d010240","sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=1//8.02383e-21",0.986957191915,2.9083178088e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027421_T001","Zm00001d027421","sp|Q9MAP3|RK11_ARATH 50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana GN=RPL11 PE=2 SV=1//2.99421e-81",0.985760138061,4.50240200678e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011386_T005","Zm00001d011386","sp|Q9AXB0|DCUP1_ORYSJ Uroporphyrinogen decarboxylase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0622300 PE=2 SV=1//1.19909e-11",0.973199072442,1.04112028776e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G815553_T01","GRMZM5G815553","sp|P11601|PSAC_MAIZE Photosystem I iron-sulfur center OS=Zea mays GN=psaC PE=3 SV=3//4.71415e-54",0.980474714521,2.16297681987e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011386_T001","Zm00001d011386","sp|Q9AXB0|DCUP1_ORYSJ Uroporphyrinogen decarboxylase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0622300 PE=2 SV=1//1.19909e-11",0.98668486972,3.22340842906e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027369_T003","Zm00001d027369","sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0117800 PE=2 SV=1//4.03104e-07",0.963367902419,4.88492373441e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053868_T001","Zm00001d053868",null,0.968981677499,2.14662767561E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037473_T008","Zm00001d037473","sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=3 SV=2//8.65638e-21",0.952994265198,1.6698331966E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001967_T001","Zm00001d001967","sp|Q9LZD7|MED7B_ARATH Mediator of RNA polymerase II transcription subunit 7b OS=Arabidopsis thaliana GN=MED7B PE=1 SV=1//2.9965e-26",0.950981199644,2.05233413375e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045394_T001","Zm00001d045394","sp|Q94A82|NUD19_ARATH Nudix hydrolase 19, chloroplastic OS=Arabidopsis thaliana GN=NUDT19 PE=1 SV=1//5.96763e-161",0.950810149905,2.08778612487E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033836_T001","Zm00001d033836","sp|Q55CU8|RSC5_DICDI Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1//4.04079e-27",0.955595784034,1.2617003442E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048944_T007","Zm00001d048944","sp|P25519|HFLX_ECOLI GTPase HflX OS=Escherichia coli (strain K12) GN=hflX PE=1 SV=3//1.74132e-16",0.970111153002,1.78664439243e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028616_T001","Zm00001d028616","sp|Q65XV2|XB3_ORYSJ E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica GN=XB3 PE=1 SV=1//3.28591e-170",0.959469205425,8.04656377529e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048065_T002","Zm00001d048065","sp|O22348|TBA2_ELEIN Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1//2.76336e-20",0.985027306255,5.77938541468e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006593_T002","Zm00001d006593","sp|F4K0A6|MYO2_ARATH Myosin-2 OS=Arabidopsis thaliana GN=VIII-2 PE=2 SV=1//0",0.96492607358,3.94107059432e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013320_T001","Zm00001d013320","sp|O34331|YLBH_BACSU Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) GN=ylbH PE=3 SV=2//2.27408e-14",0.954760359109,1.38297953622e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033366_T004","Zm00001d033366",null,0.954931022818,1.35748239982E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027322_T001","Zm00001d027322","sp|O48724|WEB1_ARATH Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 OS=Arabidopsis thaliana GN=WEB1 PE=1 SV=1//2.53853e-17",0.971229721072,1.47921551896e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053901_T002","Zm00001d053901","sp|Q43768|SYE_HORVU Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Hordeum vulgare PE=2 SV=1//0",0.965091456679,3.85010202164E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031781_T001","Zm00001d031781","sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1//2.44704e-32",0.968599714355,2.2806224087E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005458_T001","Zm00001d005458","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//1.94671e-50",0.955625175084,1.257592944e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035698_T002","Zm00001d035698","sp|Q9RB36|TRUB_FLAJ1 tRNA pseudouridine synthase B OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=truB PE=3 SV=1//2.75641e-31",0.981268379196,1.76003123187E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050333_T001","Zm00001d050333",null,0.976926228192,4.9552822734e-08]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G876106_T01","GRMZM5G876106","sp|P0CD51|NU2C2_SORBI NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Sorghum bicolor GN=ndhB2 PE=3 SV=1//0",0.981750724061,1.54604946623e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044903_T030","Zm00001d044903","sp|Q9FKP4|KCA2_ARATH Kinesin-like protein KCA2 OS=Arabidopsis thaliana GN=KCA2 PE=1 SV=1//2.49031e-170",0.960392881178,7.18174607339e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005693_T001","Zm00001d005693",null,0.975531144528,6.63017054592e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040201_T001","Zm00001d040201","sp|Q9LYR6|PTR49_ARATH Protein NRT1/ PTR FAMILY 6.1 OS=Arabidopsis thaliana GN=NPF6.1 PE=2 SV=1//0",0.975300202552,6.94631765441e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043875_T001","Zm00001d043875",null,0.960895673167,6.74306460446e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003492_T001","Zm00001d003492",null,-0.952889223109,1.68827338728E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005785_T011","Zm00001d005785","sp|Q8VYD6|PP374_ARATH Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana GN=CBSPPR1 PE=2 SV=1//6.10646e-43",0.952857049233,1.69395372751E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000401_T002","Zm00001d000401",null,0.955909242526,1.21843891243e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037777_T003","Zm00001d037777",null,0.962347737187,5.59442247194e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000270_T011","Zm00001d000270","sp|P16023|RPOB_MAIZE DNA-directed RNA polymerase subunit beta OS=Zea mays GN=rpoB PE=3 SV=1//0",0.956414881988,1.15114302712E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037150_T001","Zm00001d037150","sp|Q9ZVN4|Y1500_ARATH Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1//1.16188e-86",0.9722267843,1.24214264652e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013639_T001","Zm00001d013639",null,0.982756790416,1.16632314917E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017199_T001","Zm00001d017199","sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1//1.06197e-19",0.951394989222,1.96854372581e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011448_T001","Zm00001d011448","sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1//3.68077e-12",0.959420175607,8.0946791714e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045604_T003","Zm00001d045604","sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EDD1 PE=1 SV=1//9.25327e-07",0.958343193369,9.21057558889e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028272_T003","Zm00001d028272","sp|C4IZX0|TATC_MAIZE Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=TATC PE=2 SV=1//0",0.968044950596,2.48700358529E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034516_T006","Zm00001d034516","sp|P53799|FDFT_ARATH Squalene synthase OS=Arabidopsis thaliana GN=SQS1 PE=1 SV=1//1.16587e-47",0.960360662702,7.21061052644e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018596_T006","Zm00001d018596",null,0.954024457483,1.49731185717e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049490_T001","Zm00001d049490","sp|O82258|CRR6_ARATH Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana GN=CRR6 PE=2 SV=1//7.1108e-79",0.989248562855,1.11118159118E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051976_T004","Zm00001d051976","sp|Q0WVX5|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS4 PE=2 SV=1//5.44743e-70",0.97064948716,1.63291989708E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028950_T001","Zm00001d028950",null,0.98553601064,4.86623097373e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030266_T079","Zm00001d030266","sp|Q9SJM0|CALSA_ARATH Callose synthase 10 OS=Arabidopsis thaliana GN=CALS10 PE=2 SV=5//0",-0.955415666952,1.28710490656e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043201_T001","Zm00001d043201","sp|B8AAV3|CEST_ORYSI Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa subsp. indica GN=CEST PE=3 SV=1//2.06194e-89",0.987275304604,2.571903579e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007778_T001","Zm00001d007778","sp|Q3EBJ8|FB128_ARATH Putative F-box protein At2g39415 OS=Arabidopsis thaliana GN=At2g39415 PE=3 SV=1//9.03936e-08",-0.964004652419,4.47969098548E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045574_T005","Zm00001d045574","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//6.32388e-16",0.990082999168,7.42951700161e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007907_T001","Zm00001d007907","sp|Q94AX4|DLD_ARATH D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1//9.2252e-13",0.968158413769,2.44363059343e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018412_T001","Zm00001d018412","sp|Q8L803|RK9_WHEAT 50S ribosomal protein L9, chloroplastic OS=Triticum aestivum GN=RPL9 PE=2 SV=1//1.69614e-40",0.959674317278,7.8477343779e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002353_T001","Zm00001d002353","sp|Q39048|CER2_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER2 PE=1 SV=1//3.99992e-50",0.971344601966,1.450198297e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050033_T002","Zm00001d050033",null,0.97454387272,8.06671336395e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013799_T001","Zm00001d013799","sp|O80885|ARASP_ARATH Membrane metalloprotease ARASP, chloroplastic OS=Arabidopsis thaliana GN=ARASP PE=2 SV=1//9.98966e-131",0.971099890023,1.51256327907E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048514_T009","Zm00001d048514","sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1 SV=1//0",0.963364390591,4.887236702e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053183_T001","Zm00001d053183",null,0.950120854714,2.2356047662e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027555_T001","Zm00001d027555","sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3 SV=1//3.7308e-21",0.960149165496,7.40238685681e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012708_T004","Zm00001d012708","sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana GN=EMB1417 PE=2 SV=1//1.13502e-80",0.982815119691,1.14684155506E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017514_T001","Zm00001d017514","sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens GN=LRBA PE=1 SV=4//2.91497e-99",0.951220905493,2.00345751145e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027422_T001","Zm00001d027422","sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PPL1 PE=1 SV=1//3.9644e-84",0.971143816755,1.50121418629E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025663_T004","Zm00001d025663","sp|P62315|SMD1_MOUSE Small nuclear ribonucleoprotein Sm D1 OS=Mus musculus GN=Snrpd1 PE=3 SV=1//1.86873e-37",0.981017133032,1.88048310257E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047238_T001","Zm00001d047238","sp|Q10K62|HMOX2_ORYSJ Probable inactive heme oxygenase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=HO2 PE=2 SV=1//4.95188e-121",0.95837349497,9.17759587438e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040571_T003","Zm00001d040571","sp|Q9LGU7|SPL1_ORYSJ Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1//9.02587e-44",0.961536510956,6.21509011811e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G884960_T01","GRMZM5G884960","sp|Q06GW6|PETD_DRIGR Cytochrome b6-f complex subunit 4 OS=Drimys granadensis GN=petD PE=3 SV=1//3.29077e-108",0.968550698743,2.29828820864e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G899836_T01","GRMZM5G899836","sp|Q37082|YCF72_MAIZE Uncharacterized protein ycf72 OS=Zea mays GN=ycf72-1 PE=3 SV=1//2.58485e-79",0.979543352825,2.72620095387E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050131_T002","Zm00001d050131","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//7.33824e-33",-0.951095281771,2.02895596548e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027769_T002","Zm00001d027769","sp|P80461|GSHRP_TOBAC Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1//7.61026e-15",0.967044120967,2.89674300546e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040463_T001","Zm00001d040463","sp|Q5EFU4|CRD1_HORVU Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1//0",0.958048028874,9.53677766535e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013700_T001","Zm00001d013700","sp|Q6DDT0|KXDL1_XENLA KxDL motif-containing protein 1 OS=Xenopus laevis GN=kxd1 PE=2 SV=2//2.63542e-08",0.967297014244,2.78848207635E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044822_T001","Zm00001d044822",null,-0.959683929282,7.83851345641e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003646_T001","Zm00001d003646","sp|Q5VV42|CDKAL_HUMAN Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo sapiens GN=CDKAL1 PE=1 SV=1//1.27575e-50",0.951543829948,1.93907688573e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011461_T001","Zm00001d011461",null,0.973377281934,1.00726574859E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027221_T001","Zm00001d027221",null,0.954858409225,1.36828484854E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028915_T007","Zm00001d028915","sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2 SV=1//7.47615e-08",0.964570484342,4.14245192371e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013225_T001","Zm00001d013225","sp|Q54MI6|TIPRL_DICDI TIP41-like protein OS=Dictyostelium discoideum GN=tiprl PE=3 SV=1//1.88595e-32",0.953818321157,1.53064567376e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028915_T009","Zm00001d028915","sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2 SV=1//7.47615e-08",0.957893434646,9.71125086568e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000300_T001","Zm00001d000300","sp|P55876|IF5_MAIZE Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1//0",0.957781522083,9.83912824548e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044382_T001","Zm00001d044382","sp|Q9SZU7|KAI2_ARATH Probable esterase KAI2 OS=Arabidopsis thaliana GN=KAI2 PE=1 SV=1//1.01383e-56",0.951087766687,2.03048945746e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003540_T001","Zm00001d003540",null,0.98508511194,5.66922930822e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015837_T001","Zm00001d015837","sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2//1.02178e-28",0.985448333256,5.01478281123E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015837_T003","Zm00001d015837","sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2//1.02178e-28",0.959740428418,7.78448692618e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024875_T001","Zm00001d024875","sp|O48957|C99A1_SORBI Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1//0",-0.954528918366,1.41816242356e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002104_T002","Zm00001d002104","sp|B6U151|GATA_MAIZE Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial OS=Zea mays GN=GATA PE=2 SV=1//2.52103e-33",0.955268569766,1.30815192856e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006588_T001","Zm00001d006588","sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1//1.24273e-153",0.957741116317,9.88562519399e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051518_T001","Zm00001d051518",null,0.993971853704,6.20583584521e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031364_T001","Zm00001d031364","sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2//1.30817e-09",0.969700804026,1.91138147088E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015290_T001","Zm00001d015290","sp|Q67UX0|ADO2_ORYSJ Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0150800 PE=3 SV=1//0",0.975487967092,6.68838906481e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d054006_T001","Zm00001d054006",null,0.952491495248,1.75956412263E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009745_T031","Zm00001d009745","sp|Q6QNU4|DDB1_SOLLC DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1//0",0.992297248579,2.10812478585e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041923_T002","Zm00001d041923","sp|Q9SZL7|FRS9_ARATH Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9 PE=2 SV=2//2.3902e-16",0.969708420129,1.90900493857e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017908_T002","Zm00001d017908","sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1//3.97134e-19",0.95251656277,1.75500158051E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009339_T001","Zm00001d009339","sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1//2.58444e-25",0.986238594567,3.79819686813e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046445_T004","Zm00001d046445","sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum GN=strap PE=3 SV=1//4.53099e-10",-0.952768306071,1.70970007687E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029324_T004","Zm00001d029324","sp|P55217|CGS1_ARATH Cystathionine gamma-synthase 1, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=1 SV=3//6.31238e-13",0.951405265139,1.96649800177e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028263_T001","Zm00001d028263","sp|P0C8Q6|PP368_ARATH Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana GN=At5g08310 PE=3 SV=1//6.43525e-19",0.964093850942,4.42512766874e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022269_T001","Zm00001d022269",null,0.955588467969,1.26272441792e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050715_T003","Zm00001d050715",null,0.976677956128,5.22549175042e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018467_T001","Zm00001d018467",null,0.975432472542,6.76381275433e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037476_T001","Zm00001d037476","sp|Q9FKC3|PP424_ARATH Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2//1.5647e-07",0.97374450669,9.40267708138e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051561_T001","Zm00001d051561","sp|Q6NQL6|LPPE2_ARATH Lipid phosphate phosphatase epsilon 2, chloroplastic OS=Arabidopsis thaliana GN=LPPE2 PE=1 SV=1//1.12494e-38",0.952330978368,1.78900335435E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012973_T001","Zm00001d012973","sp|Q94BT9|ATOX1_ARATH Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=1//1.68548e-11",0.995076814997,2.25899299267e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018413_T017","Zm00001d018413","sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana GN=CLPP6 PE=1 SV=1//5.64111e-98",0.963216218193,4.98562251483e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030786_T002","Zm00001d030786",null,0.980326380657,2.24583605046E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024409_T001","Zm00001d024409","sp|O65567|PP342_ARATH Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana GN=At4g30825 PE=2 SV=2//0",0.957763101241,9.86030444627e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020030_T001","Zm00001d020030",null,0.991846084501,2.80008016773e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025923_T001","Zm00001d025923","sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1//4.20762e-78",0.995548541662,1.36628486302E-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045505_T001","Zm00001d045505","sp|Q658I5|LMBD1_ORYSJ LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica GN=Os06g0128200 PE=2 SV=1//4.33267e-55",-0.966539407922,3.12279573418e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032358_T001","Zm00001d032358","sp|Q94BT2|AIR12_ARATH Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3//1.42534e-27",0.978735558101,3.30419869243e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040450_T001","Zm00001d040450",null,0.962275212515,5.64781684087e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013455_T001","Zm00001d013455","sp|Q9LDY5|FK172_ARATH Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-2 PE=1 SV=1//4.47236e-79",0.975266507885,6.99343032373e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018065_T001","Zm00001d018065",null,0.972843233039,1.11142938852e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011585_T001","Zm00001d011585",null,0.968467910541,2.32837316316E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015986_T002","Zm00001d015986","sp|Q93Z51|NIC4_ARATH Probable inactive nicotinamidase At3g16190 OS=Arabidopsis thaliana GN=At3g16190 PE=2 SV=1//5.55619e-23",0.961460689074,6.27578527368e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047951_T004","Zm00001d047951",null,0.953609608613,1.56499333093E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049046_T002","Zm00001d049046","sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=2 SV=1//0",0.952194614255,1.81431866997e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003663_T001","Zm00001d003663","sp|Q8DJB3|GRPE_THEEB Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1//3.15912e-37",0.97645975303,5.4725512566e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050748_T001","Zm00001d050748",null,0.960877897812,6.75820102103e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031945_T006","Zm00001d031945",null,0.970305677421,1.72982367541e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033038_T001","Zm00001d033038","sp|Q9M7I9|STEP1_ARATH Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana GN=SEP1 PE=2 SV=1//9.47776e-13",0.994898087545,2.69908539963e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004672_T001","Zm00001d004672",null,0.98273092443,1.17504626029E-8]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G855343_T01","GRMZM5G855343","sp|A1E9Q3|RR19_SORBI 30S ribosomal protein S19, chloroplastic OS=Sorghum bicolor GN=rps19 PE=3 SV=1//1.03129e-61",0.988860894176,1.32562982813E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015463_T001","Zm00001d015463","sp|B6U8R7|CSPL9_MAIZE CASP-like protein 2C4 OS=Zea mays PE=2 SV=1//2.85796e-75",0.987137361695,2.71373656879e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040678_T001","Zm00001d040678",null,0.950598919436,2.13223438084e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053962_T002","Zm00001d053962","sp|Q9SQK3|EM506_ARATH Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1//5.5668e-91",0.9917135114,3.03455927053e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011192_T001","Zm00001d011192","sp|B9EXM2|CARB_ORYSJ Carbamoyl-phosphate synthase large chain, chloroplastic OS=Oryza sativa subsp. japonica GN=CARB PE=2 SV=1//0",0.979961738212,2.46031666151e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003293_T001","Zm00001d003293","sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1//4.98625e-60",-0.966095239813,3.33313714511e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016878_T001","Zm00001d016878","sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1//2.17036e-55",0.987850907192,2.04246974889e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016361_T001","Zm00001d016361","sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1//2.61168e-15",0.978794607242,3.25889901731e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043721_T002","Zm00001d043721","sp|Q8GX93|CLCE_ARATH Chloride channel protein CLC-e OS=Arabidopsis thaliana GN=CLC-E PE=2 SV=2//1.17998e-158",0.952558605062,1.74737053404e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043721_T001","Zm00001d043721","sp|Q8GX93|CLCE_ARATH Chloride channel protein CLC-e OS=Arabidopsis thaliana GN=CLC-E PE=2 SV=2//1.17998e-158",0.966780885455,3.01295581595e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G831399_T01","GRMZM5G831399","sp|A1E9V3|PSBH_SORBI Photosystem II reaction center protein H OS=Sorghum bicolor GN=psbH PE=3 SV=1//8.29281e-45",0.974915719149,7.49920099352e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051883_T001","Zm00001d051883","sp|Q54GU0|ARSB_DICDI Putative transporter arsB OS=Dictyostelium discoideum GN=arsB PE=2 SV=1//1.04777e-20",0.956450912646,1.14646279425E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039276_T003","Zm00001d039276","sp|Q7XXL2|4CLL9_ORYSJ 4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2//5.12571e-16",0.959755015916,7.77058599244e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034604_T001","Zm00001d034604","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//1.48178e-173",0.985000391543,5.83125414622e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047802_T001","Zm00001d047802","sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6 PE=1 SV=2//4.6937e-40",0.950207335539,2.21661694932e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034627_T003","Zm00001d034627","sp|Q06GW6|PETD_DRIGR Cytochrome b6-f complex subunit 4 OS=Drimys granadensis GN=petD PE=3 SV=1//9.01506e-51",0.961148618287,6.53057521394e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021672_T001","Zm00001d021672","sp|Q195N6|PDRP1_MAIZE Pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Zea mays GN=PDRP1 PE=1 SV=1//0",0.975149511201,7.15899808323e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022240_T008","Zm00001d022240",null,0.975043478139,7.31173388502e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006593_T012","Zm00001d006593","sp|F4K0A6|MYO2_ARATH Myosin-2 OS=Arabidopsis thaliana GN=VIII-2 PE=2 SV=1//0",0.988030213726,1.89670035233e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015198_T001","Zm00001d015198",null,0.950905010717,2.06806568537e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000947_T001","Zm00001d000947",null,0.977156788183,4.71443466488E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d054079_T002","Zm00001d054079","sp|Q6YPG5|NOS_ORYSJ Putative nitric oxide synthase OS=Oryza sativa subsp. japonica GN=Os02g0104700 PE=3 SV=1//0",0.962991878607,5.13757306031e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020357_T003","Zm00001d020357","sp|Q6H601|RH22_ORYSJ DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 PE=2 SV=2//4.18618e-103",0.969100101842,2.10638216425E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044327_T002","Zm00001d044327","sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1//1.10974e-18",0.950325920201,2.19078852903e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005762_T001","Zm00001d005762",null,0.965137757137,3.82493613227e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052556_T001","Zm00001d052556","sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1//0",0.970763651792,1.60171633734e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051244_T001","Zm00001d051244","sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1//2.50563e-07",0.950312561579,2.19368612586E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031379_T001","Zm00001d031379","sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2//0",0.975844382464,6.21979383553e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031899_T002","Zm00001d031899","sp|P15719|MDHP_MAIZE Malate dehydrogenase [NADP], chloroplastic OS=Zea mays PE=1 SV=1//0",0.966177282922,3.29346022454e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031899_T001","Zm00001d031899","sp|P15719|MDHP_MAIZE Malate dehydrogenase [NADP], chloroplastic OS=Zea mays PE=1 SV=1//0",0.968314987283,2.38476850267e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014600_T001","Zm00001d014600",null,0.989345149103,1.06233022379e-09]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G845244_T01","GRMZM5G845244","sp|A1E9W0|RR8_SORBI 30S ribosomal protein S8, chloroplastic OS=Sorghum bicolor GN=rps8 PE=3 SV=1//3.72882e-94",0.973882534976,9.16023532582e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028414_T003","Zm00001d028414","sp|Q8GW78|CLP41_ARATH Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1//2.50489e-40",0.969845564128,1.8666113033e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011066_T003","Zm00001d011066","sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1//2.72004e-30",-0.960152721581,7.39912921767e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008297_T001","Zm00001d008297",null,0.951063836247,2.03537871313e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032261_T004","Zm00001d032261","sp|O53732|UFAA1_MYCTU Tuberculostearic acid methyltransferase UfaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ufaA1 PE=1 SV=3//3.1428e-54",0.953894453325,1.51826665373e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048193_T002","Zm00001d048193","sp|Q94EH2|TI222_ARATH Mitochondrial import inner membrane translocase subunit TIM22-2 OS=Arabidopsis thaliana GN=TIM22-2 PE=1 SV=1//9.46692e-52",0.983070832238,1.06447435311E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033371_T002","Zm00001d033371","sp|Q9ZR37|DUS1_ARATH Dual specificity protein phosphatase 1 OS=Arabidopsis thaliana GN=DSPTP1 PE=1 SV=1//8.27475e-29",0.98939021977,1.04012931601e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030149_T001","Zm00001d030149","sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1//7.84239e-120",0.966402502194,3.18646950159e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011301_T001","Zm00001d011301","sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1//0",0.975187511689,7.10488303746e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034887_T001","Zm00001d034887","sp|Q8GWU0|PGP2_ARATH Phosphoglycolate phosphatase 2 OS=Arabidopsis thaliana GN=PGLP2 PE=1 SV=1//1.21601e-139",0.992085348753,2.41363817821e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009967_T001","Zm00001d009967","sp|O48917|SQD1_ARATH UDP-sulfoquinovose synthase, chloroplastic OS=Arabidopsis thaliana GN=SQD1 PE=1 SV=1//0",0.963590609387,4.74001125017e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017330_T001","Zm00001d017330","sp|Q9FN42|CLPP2_ARATH ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1//3.00531e-92",0.9834416196,9.53490886246e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000102_T001","Zm00001d000102",null,-0.965325091961,3.72444505755e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010711_T001","Zm00001d010711","sp|O94424|T2FB_SCHPO Transcription initiation factor IIF subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tfg2 PE=1 SV=1//6.37657e-17",0.96505445912,3.87030595128E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022326_T001","Zm00001d022326","sp|Q9LT10|CXE18_ARATH Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=1 SV=1//2.06704e-87",0.954275425486,1.45750882519E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039833_T001","Zm00001d039833","sp|Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1//1.22457e-74",0.960719283149,6.89446653546e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032896_T001","Zm00001d032896","sp|O22795|RK28_ARATH 50S ribosomal protein L28, chloroplastic OS=Arabidopsis thaliana GN=RPL28 PE=2 SV=2//6.2893e-46",0.97655808773,5.3600861083e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028423_T001","Zm00001d028423","sp|Q9LXU9|IRKI_ARATH IRK-interacting protein OS=Arabidopsis thaliana GN=IRKI PE=1 SV=1//1.14104e-33",0.959048341948,8.46706504243e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046555_T001","Zm00001d046555","sp|P23326|RK35_SPIOL 50S ribosomal protein L35, chloroplastic OS=Spinacia oleracea GN=RPL35 PE=1 SV=1//2.53203e-25",0.989663379989,9.13369824218e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035579_T007","Zm00001d035579","sp|Q8VYR2|NUDT9_ARATH Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9 PE=2 SV=1//1.90868e-12",0.965218962072,3.78111446375e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005837_T001","Zm00001d005837","sp|P93751|ZFP8_ARATH Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1//4.13552e-19",0.955153247071,1.32484284499E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030892_T002","Zm00001d030892","sp|Q2YDW2|MSTO1_MOUSE Protein misato homolog 1 OS=Mus musculus GN=Msto1 PE=2 SV=1//2.10732e-19",0.95576833508,1.23773782024E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039190_T001","Zm00001d039190",null,0.95506401288,1.33787354328e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033666_T001","Zm00001d033666","sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1//1.10018e-49",0.988405849454,1.61820867817e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036148_T004","Zm00001d036148","sp|B2LXS7|WHY1_MAIZE Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays GN=WHY1 PE=2 SV=1//5.47399e-13",0.989359352145,1.05529363026e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034897_T001","Zm00001d034897","sp|P19954|PRSP1_SPIOL Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea GN=PSRP1 PE=1 SV=2//1.16945e-82",0.971785739649,1.34295453424E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025704_T001","Zm00001d025704","sp|Q9SV07|ASAT1_ARATH Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1//2.75574e-48",-0.955983704124,1.20833745334E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051700_T001","Zm00001d051700","sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2//6.9137e-31",0.976481428482,5.44760103693E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008230_T001","Zm00001d008230","sp|Q5EFU4|CRD1_HORVU Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1//0",0.971258356412,1.47193979227E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048777_T012","Zm00001d048777","sp|Q2R0Q1|U2A2A_ORYSJ Splicing factor U2af large subunit A OS=Oryza sativa subsp. japonica GN=U2AF65A PE=2 SV=2//2.30279e-26",-0.975136640793,7.17740057714e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030109_T001","Zm00001d030109","sp|O82290|SKL2_ARATH Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana GN=SKL2 PE=2 SV=2//1.91317e-104",0.96404576126,4.45447839059e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020460_T001","Zm00001d020460","sp|Q6ER21|ZHD9_ORYSJ Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica GN=ZHD9 PE=3 SV=2//1.07918e-78",0.955071229292,1.33681597925E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033898_T002","Zm00001d033898","sp|Q94KL5|BLH4_ARATH BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=1 SV=2//2.68957e-117",0.969612442357,1.93912642388e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015605_T001","Zm00001d015605","sp|P56185|RNJ_HELPY Ribonuclease J OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=rnj PE=1 SV=1//1.06864e-13",0.957429111763,1.02505710409E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026689_T007","Zm00001d026689","sp|C4LK80|BIOWF_CORK4 Biotin biosynthesis bifunctional protein BioWF OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=bioWF PE=3 SV=1//4.98548e-22",0.978083518399,3.83861462616e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033018_T001","Zm00001d033018","sp|Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1//1.7653e-126",0.95659745598,1.12758284532e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009364_T001","Zm00001d009364","sp|Q5JJY4|P2C04_ORYSJ Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1//0",0.960300559485,7.26470315904e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011418_T003","Zm00001d011418","sp|Q9LUC5|C7A15_ARATH Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1//2.49174e-62",0.964542802106,4.1584659094e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009482_T001","Zm00001d009482",null,0.980782562508,1.99878815721e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043592_T001","Zm00001d043592","sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1//1.4845e-29",0.954151020282,1.47713287912E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048113_T001","Zm00001d048113",null,0.964407993903,4.23715656339e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003928_T002","Zm00001d003928","sp|Q7XRU4|MUB4_ORYSJ Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica GN=MUB4 PE=2 SV=2//2.92893e-49",0.956002494567,1.20579887808e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007534_T001","Zm00001d007534","sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1//0",0.966042261217,3.35895949277E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038365_T005","Zm00001d038365","sp|Q84TF0|AKRCA_ARATH Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana GN=AKR4C10 PE=1 SV=1//1.6685e-62",0.972475080169,1.18809887262E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002880_T001","Zm00001d002880","sp|P93832|LEU32_ARATH 3-isopropylmalate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=IMDH2 PE=1 SV=1//0",0.954713788402,1.39000277666E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009391_T001","Zm00001d009391","sp|Q9FND8|PP409_ARATH Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1//1.259e-90",0.991048582389,4.45881331856e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016165_T033","Zm00001d016165","sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2//3.32891e-18",0.951426777057,1.96222088067e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015421_T001","Zm00001d015421","sp|Q9FUD3|BZIP9_ARATH Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1//1.1629e-33",-0.96492331388,3.94260292245e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038922_T001","Zm00001d038922","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//9.56297e-30",0.97338807788,1.00524336411E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019501_T004","Zm00001d019501","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//5.31358e-28",0.965243337828,3.76803847235e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030790_T002","Zm00001d030790","sp|Q8GWT1|GAUTE_ARATH Probable galacturonosyltransferase 14 OS=Arabidopsis thaliana GN=GAUT14 PE=2 SV=1//6.04313e-42",-0.95583939,1.22797593434E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049650_T001","Zm00001d049650","sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2//1.53721e-10",0.953972864061,1.50560032242e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029396_T001","Zm00001d029396",null,0.985085961878,5.66762237142e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021755_T001","Zm00001d021755","sp|Q4R1I9|ANGLT_ROSHC Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1//4.42985e-86",0.986185871901,3.87117293776e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029396_T002","Zm00001d029396",null,0.989240325644,1.11542952652E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053124_T001","Zm00001d053124","sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1//4.40985e-74",0.952406254054,1.77514933197E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041067_T001","Zm00001d041067","sp|Q2QR07|SWT13_ORYSJ Bidirectional sugar transporter SWEET13 OS=Oryza sativa subsp. japonica GN=SWEET13 PE=2 SV=1//2.91784e-124",0.953778581654,1.53713901674e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003411_T001","Zm00001d003411","sp|O48609|RRP3_HORVU 30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare GN=PSRP3 PE=2 SV=1//6.97897e-56",0.963211870673,4.9885328357e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011993_T002","Zm00001d011993","sp|O65037|RK27_ORYSJ 50S ribosomal protein L27, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL27 PE=2 SV=1//3.30628e-69",0.993234986786,1.10329301251e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011467_T001","Zm00001d011467",null,0.969449843543,1.99101837017E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042125_T001","Zm00001d042125","sp|Q9FX56|SOT8_ARATH Cytosolic sulfotransferase 8 OS=Arabidopsis thaliana GN=SOT8 PE=2 SV=1//1.24334e-79",0.958984830753,8.53200863737e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020437_T001","Zm00001d020437","sp|Q9XI84|RBCMT_ARATH [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1//0",0.96297645124,5.14815608588E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021015_T002","Zm00001d021015","sp|Q0J0S6|TOP3B_ORYSJ DNA topoisomerase 3-beta OS=Oryza sativa subsp. japonica GN=TOP3B PE=2 SV=1//6.76413e-38",0.961125804672,6.54951881174e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000674_T001","Zm00001d000674",null,0.966589785636,3.0996218614e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048479_T002","Zm00001d048479","sp|Q94JX9|NACA2_ARATH Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2//2.31527e-53",0.982705440263,1.18369141155e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017881_T002","Zm00001d017881","sp|Q9FVJ3|AGD12_ARATH ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1//3.84519e-137",-0.957737249426,9.8900841542e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033665_T002","Zm00001d033665","sp|P82163|RR13_SPIOL 30S ribosomal protein S13, chloroplastic OS=Spinacia oleracea GN=RPS13 PE=1 SV=2//5.89352e-74",0.975439100823,6.75476867773e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015400_T002","Zm00001d015400","sp|A4SML8|RLMI_AERS4 Ribosomal RNA large subunit methyltransferase I OS=Aeromonas salmonicida (strain A449) GN=rlmI PE=3 SV=1//4.68542e-09",0.967956433088,2.52126416411e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015400_T003","Zm00001d015400","sp|A4SML8|RLMI_AERS4 Ribosomal RNA large subunit methyltransferase I OS=Aeromonas salmonicida (strain A449) GN=rlmI PE=3 SV=1//4.68542e-09",0.954195338789,1.47011805129E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042976_T001","Zm00001d042976",null,0.958929513547,8.58889524835e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029208_T001","Zm00001d029208","sp|Q5HZL9|HDHD3_XENLA Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1//4.66681e-16",0.954273463099,1.45781676331e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019899_T001","Zm00001d019899","sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1//1.20195e-95",0.979790126202,2.56675023458e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034900_T004","Zm00001d034900","sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1//1.02037e-128",0.978582072126,3.42429729017e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034900_T002","Zm00001d034900","sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1//1.02037e-128",0.976045356048,5.96733857883e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034900_T003","Zm00001d034900","sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1//1.02037e-128",0.968328741496,2.37965216421e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034900_T001","Zm00001d034900","sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1//1.02037e-128",0.983152698192,1.03912687344E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030143_T001","Zm00001d030143","sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2//6.39646e-24",0.972278637583,1.23069779701e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018535_T001","Zm00001d018535","sp|Q94AM1|OOPDA_ARATH Organellar oligopeptidase A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OOP PE=1 SV=1//0",0.961798589757,6.00887997138E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046574_T001","Zm00001d046574",null,0.952774032191,1.70868055793E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025657_T001","Zm00001d025657","sp|Q0JM76|GRXS4_ORYSJ Monothiol glutaredoxin-S4, mitochondrial OS=Oryza sativa subsp. japonica GN=GRXS4 PE=2 SV=1//1.30677e-17",0.951528928915,1.94201106751E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043146_T002","Zm00001d043146",null,0.962024597975,5.83545125998e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031963_T002","Zm00001d031963","sp|Q55535|Y328_SYNY3 Putative low molecular weight protein-tyrosine-phosphatase slr0328 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0328 PE=3 SV=1//5.61886e-43",0.956514794517,1.13820194914e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043146_T001","Zm00001d043146",null,0.959424418199,8.0905066957e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035664_T001","Zm00001d035664","sp|Q9ZV24|OP161_ARATH Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana GN=OEP161 PE=1 SV=1//5.81431e-36",0.974350979458,8.37428799638e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024998_T028","Zm00001d024998","sp|B9FK36|ACC2_ORYSJ Acetyl-CoA carboxylase 2 OS=Oryza sativa subsp. japonica GN=ACC2 PE=3 SV=2//0",-0.951806311864,1.88796511591e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022110_T001","Zm00001d022110","sp|B8B8C5|ALFL9_ORYSI PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 SV=1//4.41017e-22",0.982089798359,1.4084605926e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013431_T001","Zm00001d013431","sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1//1.49047e-69",0.979720791041,2.61077881536e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015085_T001","Zm00001d015085","sp|F4KDA6|LPA2_ARATH Protein LOW PSII ACCUMULATION 2, chloroplastic OS=Arabidopsis thaliana GN=LPA2 PE=1 SV=1//1.91658e-13",0.983332492773,9.8514698621e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006951_T001","Zm00001d006951","sp|Q9LQY3|P24D9_ARATH Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana GN=At1g26690 PE=2 SV=1//5.19624e-71",-0.956383892235,1.15518058945E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014972_T001","Zm00001d014972","sp|B0JZ89|FA32A_XENTR Protein FAM32A OS=Xenopus tropicalis GN=fam32a PE=3 SV=1//9.02195e-10",0.952962101892,1.6754624208e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009425_T001","Zm00001d009425",null,0.963213542886,4.98741326016E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019052_T001","Zm00001d019052","sp|Q9SR70|FK164_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1//1.06624e-94",0.985117001451,5.60918089754e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052475_T001","Zm00001d052475","sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1//5.33451e-171",0.955405868689,1.28849845371E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052475_T002","Zm00001d052475","sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1//5.33451e-171",0.954427598227,1.43378656725e-06]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G811749_T01","GRMZM5G811749","sp|A1E9Q6|RR16_SORBI 30S ribosomal protein S16, chloroplastic OS=Sorghum bicolor GN=rps16 PE=3 SV=1//1.02397e-50",0.990884843906,4.88047380287e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039687_T001","Zm00001d039687","sp|P23993|PSAL_HORVU Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1//9.80024e-105",0.96460502998,4.12253631898e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002001_T001","Zm00001d002001",null,0.988715339595,1.41418854405e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042178_T001","Zm00001d042178","sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28 PE=2 SV=2//3.33709e-81",0.968138753688,2.45110251651E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030549_T001","Zm00001d030549","sp|Q9MTQ6|RCCR_HORVU Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=2 SV=1//9.8651e-108",0.963064402664,5.08805373389E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027950_T002","Zm00001d027950","sp|Q10QR9|HEM4_ORYSJ Uroporphyrinogen-III synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=UROS PE=2 SV=1//1.18282e-25",0.959733661481,7.79094207815E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028548_T003","Zm00001d028548",null,0.971884141406,1.31991726882E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028548_T002","Zm00001d028548",null,0.960939262506,6.70606056463E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039400_T012","Zm00001d039400","sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens GN=CNOT4 PE=1 SV=3//5.16685e-38",0.988202979136,1.76422565445E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003725_T001","Zm00001d003725","sp|P68428|H32_WHEAT Histone H3.2 OS=Triticum aestivum PE=1 SV=2//1.31296e-78",0.984727755508,6.37790753544e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037856_T001","Zm00001d037856","sp|Q1JPN0|STR7_ARATH Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana GN=STR7 PE=2 SV=1//2.85844e-168",0.991362528908,3.73182373892e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013130_T002","Zm00001d013130","sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1//5.21465e-25",0.958436161405,9.10968839474e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003778_T001","Zm00001d003778","sp|Q9LZB8|AB29B_ARATH ABC transporter B family member 29, chloroplastic OS=Arabidopsis thaliana GN=ABCB29 PE=2 SV=1//1.10525e-151",0.982608303549,1.21711019041E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011595_T030","Zm00001d011595","sp|Q5QM84|TPC1_ORYSJ Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica GN=TPC1 PE=1 SV=2//6.72487e-35",0.970874349484,1.57191541117E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026634_T001","Zm00001d026634","sp|Q940P5|TET19_ARATH Tetraspanin-19 OS=Arabidopsis thaliana GN=TOM2AH3 PE=2 SV=1//3.00721e-52",0.959655546825,7.86576595857e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040678_T013","Zm00001d040678",null,0.96302631211,5.11401437642e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G875287_T01","GRMZM5G875287","sp|Q6ENW9|ATPI_SACOF ATP synthase subunit a, chloroplastic OS=Saccharum officinarum GN=atpI PE=3 SV=1//1.15996e-146",0.978005435617,3.90697083574e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038894_T001","Zm00001d038894","sp|Q9S713|STT7_ARATH Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana GN=STN7 PE=1 SV=1//0",0.982858242638,1.13260636425e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006466_T001","Zm00001d006466","sp|P36774|LON2_MYXXA Lon protease 2 OS=Myxococcus xanthus GN=lon2 PE=1 SV=3//5.47204e-08",0.962236536006,5.67645651817E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030688_T002","Zm00001d030688","sp|Q9LW20|SKL1_ARATH Probable inactive shikimate kinase like 1, chloroplastic OS=Arabidopsis thaliana GN=SKL1 PE=2 SV=1//2.57322e-46",0.982414306942,1.28610448957E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048441_T001","Zm00001d048441","sp|O49668|PAM68_ARATH Protein PAM68, chloroplastic OS=Arabidopsis thaliana GN=PAM68 PE=1 SV=1//2.79853e-46",0.97916738447,2.9842162963e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030688_T006","Zm00001d030688","sp|Q9LW20|SKL1_ARATH Probable inactive shikimate kinase like 1, chloroplastic OS=Arabidopsis thaliana GN=SKL1 PE=2 SV=1//2.57322e-46",0.951068438135,2.03443777158e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008513_T001","Zm00001d008513","sp|Q5QQ57|XYLT1_PANTR Xylosyltransferase 1 OS=Pan troglodytes GN=XYLT1 PE=2 SV=1//3.95561e-14",-0.956705113864,1.11387067091e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041595_T001","Zm00001d041595","sp|Q0VMF9|RS6_ALCBS 30S ribosomal protein S6 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) GN=rpsF PE=3 SV=1//1.1806e-20",0.962903499641,5.19843513791e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037267_T003","Zm00001d037267","sp|Q9NV31|IMP3_HUMAN U3 small nucleolar ribonucleoprotein protein IMP3 OS=Homo sapiens GN=IMP3 PE=1 SV=1//5.1744e-10",0.975833066647,6.23425728818e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044601_T003","Zm00001d044601","sp|F4HT41|SAMC2_ARATH Probable S-adenosylmethionine carrier 2, chloroplastic OS=Arabidopsis thaliana GN=SAMC2 PE=2 SV=1//9.1045e-12",0.98766701532,2.20111928684E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037079_T001","Zm00001d037079","sp|P52032|GPX1_ARATH Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=2 SV=2//1.08394e-99",0.965722181828,3.51837460499e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018895_T001","Zm00001d018895",null,0.953057259999,1.65885132164e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026244_T001","Zm00001d026244","sp|Q9I6J0|SPUE_PSEAE Spermidine-binding periplasmic protein SpuE OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=spuE PE=1 SV=1//1.24258e-15",0.958589172259,8.94555640674E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039070_T002","Zm00001d039070",null,0.98820643818,1.76165082522e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039070_T001","Zm00001d039070",null,0.990760751736,5.2207660417e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012868_T002","Zm00001d012868","sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO PE=2 SV=1//1.7565e-50",0.977404099601,4.46655428199e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010523_T006","Zm00001d010523","sp|Q9FQ11|SPP1_MAIZE Sucrose-phosphatase 1 OS=Zea mays GN=SPP1 PE=1 SV=1//1.14416e-18",0.983344029048,9.81761405505e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016891_T001","Zm00001d016891","sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1//1.1012e-30",-0.951712866957,1.90603711726e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002317_T008","Zm00001d002317","sp|Q9XIR4|APO1_ARATH APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1//1.54436e-151",0.950807311893,2.0883784031e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049706_T009","Zm00001d049706","sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1//5.15489e-07",-0.97129179503,1.46347972893e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027714_T001","Zm00001d027714","sp|P35159|RLUB_BACSU Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) GN=rluB PE=1 SV=2//1.91279e-18",0.955195701112,1.31867883324E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027714_T002","Zm00001d027714","sp|P35159|RLUB_BACSU Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) GN=rluB PE=1 SV=2//1.91279e-18",0.956387914585,1.15465589556e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050666_T001","Zm00001d050666","sp|Q6ER94|BAS1_ORYSJ 2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1//5.38872e-137",0.982209510884,1.36228823777e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018936_T001","Zm00001d018936","sp|Q9S726|RPI3_ARATH Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana GN=RPI3 PE=1 SV=1//5.08234e-118",0.956440449673,1.14782033167e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034724_T001","Zm00001d034724","sp|Q8SAY0|RK18_ORYSJ 50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL18 PE=2 SV=1//2.6203e-73",0.970000908372,1.81950023714e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002700_T001","Zm00001d002700",null,0.979450165238,2.78842700041E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034298_T001","Zm00001d034298","sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1//1.81451e-32",0.982107855632,1.40141724891e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025924_T001","Zm00001d025924","sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1//5.92442e-68",0.972263474309,1.23403585128e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020438_T002","Zm00001d020438","sp|Q6P4K8|PIN4_XENTR Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Xenopus tropicalis GN=pin4 PE=2 SV=1//1.16375e-10",0.973448479632,9.93987983033e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042827_T003","Zm00001d042827","sp|P38420|NRPB2_ARATH DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis thaliana GN=NRPB2 PE=1 SV=2//3.27831e-133",0.979611589099,2.68134228154e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050173_T001","Zm00001d050173",null,0.99213329409,2.34159802659e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028756_T001","Zm00001d028756",null,0.993672580572,7.90310039633e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009723_T001","Zm00001d009723","sp|Q84JF5|PTA14_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana GN=PTAC14 PE=1 SV=1//1.82206e-11",0.952375164411,1.78086083213E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025904_T001","Zm00001d025904",null,0.950671931141,2.11678683293e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048687_T002","Zm00001d048687","sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1//0",-0.974163423772,8.68223776698e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036642_T001","Zm00001d036642","sp|P42856|ZB14_MAIZE 14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1//2.81374e-52",0.988630934217,1.46766643283e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012734_T001","Zm00001d012734","sp|Q9SGQ0|VOZ1_ARATH Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=1//9.56869e-15",0.973824973591,9.26072698526e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015612_T001","Zm00001d015612","sp|P0AF48|YJBQ_ECOLI UPF0047 protein YjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1//8.81497e-44",0.961706669096,6.08057651563e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005446_T001","Zm00001d005446","sp|P13194|PSAE_HORVU Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare GN=PSAE PE=1 SV=2//7.71148e-51",0.95363891793,1.5601333585e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011596_T001","Zm00001d011596","sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic OS=Arabidopsis thaliana GN=RPS20 PE=2 SV=1//6.03161e-10",0.987177784443,2.67154298683e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015549_T002","Zm00001d015549","sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2//5.87047e-173",0.965211817672,3.78495379483e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042185_T013","Zm00001d042185","sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1//1.72527e-40",-0.953734039558,1.54444305266e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033527_T002","Zm00001d033527","sp|Q9AUK4|MRS2A_ORYSJ Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica GN=MRS2-A PE=2 SV=1//6.08997e-07",0.98859797327,1.48898315899E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033316_T001","Zm00001d033316","sp|Q75GK4|CIPK7_ORYSJ CBL-interacting protein kinase 7 OS=Oryza sativa subsp. japonica GN=CIPK7 PE=2 SV=1//0",0.955588294798,1.26274866563e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006868_T006","Zm00001d006868","sp|B8B8K5|GLO4_ORYSI Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Oryza sativa subsp. indica GN=GLO4 PE=3 SV=2//4.18693e-37",0.96378122355,4.61871429547E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029249_T001","Zm00001d029249",null,0.963578204617,4.74799187966E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021295_T005","Zm00001d021295","sp|Q02104|LIP1_PSYIM Lipase 1 OS=Psychrobacter immobilis GN=lip1 PE=1 SV=2//3.18516e-07",0.974141942564,8.71807581682e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033893_T001","Zm00001d033893",null,0.987294479784,2.55266563443e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021295_T003","Zm00001d021295","sp|Q02104|LIP1_PSYIM Lipase 1 OS=Psychrobacter immobilis GN=lip1 PE=1 SV=2//3.18516e-07",0.969674276895,1.91967740371e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006625_T001","Zm00001d006625",null,0.97635205505,5.59787416421e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001896_T002","Zm00001d001896","sp|Q2N2K4|PHYK_MAIZE Probable phytol kinase, chloroplastic OS=Zea mays PE=2 SV=1//3.69941e-07",0.971036536614,1.52905170303E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016926_T001","Zm00001d016926","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//3.13791e-165",0.951068367213,2.03445227065E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021368_T001","Zm00001d021368","sp|O78458|YCF37_GUITH Uncharacterized protein ycf37 OS=Guillardia theta GN=ycf37 PE=3 SV=1//8.02045e-22",0.976342663339,5.60891031398e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011124_T003","Zm00001d011124",null,0.959001487121,8.51493846765e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011124_T001","Zm00001d011124",null,0.960244719636,7.3152471991e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038683_T001","Zm00001d038683","sp|Q9FME3|TCP5_ARATH Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=2 SV=1//1.23248e-38",0.961949965104,5.89227528547e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042148_T001","Zm00001d042148","sp|Q5JLP4|CKX4_ORYSJ Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4 PE=2 SV=1//0",0.956412885771,1.15140277024E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016587_T001","Zm00001d016587",null,0.962404510691,5.55290509574e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042620_T001","Zm00001d042620","sp|Q9LVM2|NDHN_ARATH NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana GN=ndhN PE=2 SV=1//7.27317e-37",0.975715778237,6.38575516909E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016855_T007","Zm00001d016855","sp|Q96282|CLCC_ARATH Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1//9.42522e-13",0.950325104714,2.19096532805e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007442_T001","Zm00001d007442","sp|Q91WW7|PLPL3_MOUSE Patatin-like phospholipase domain-containing protein 3 OS=Mus musculus GN=Pnpla3 PE=2 SV=1//2.01476e-17",0.96156179905,6.19495115428e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015767_T002","Zm00001d015767",null,-0.962369624438,5.57838762755e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011904_T001","Zm00001d011904","sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1//3.2668e-43",-0.958316152273,9.24008603811E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039036_T001","Zm00001d039036","sp|A5GQ79|RIMM_SYNR3 Ribosome maturation factor RimM OS=Synechococcus sp. (strain RCC307) GN=rimM PE=3 SV=1//1.33275e-09",0.965103020905,3.84380416829e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039036_T002","Zm00001d039036","sp|A5GQ79|RIMM_SYNR3 Ribosome maturation factor RimM OS=Synechococcus sp. (strain RCC307) GN=rimM PE=3 SV=1//1.33275e-09",0.964258162318,4.3260010818e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037775_T004","Zm00001d037775","sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=1 SV=1//2.99974e-20",0.987101118289,2.75201839095e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042601_T001","Zm00001d042601","sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1//4.32683e-27",0.979326980358,2.87241592734e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009189_T001","Zm00001d009189",null,0.988398131912,1.62358060329e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004498_T002","Zm00001d004498","sp|Q10126|YSM6_CAEEL Putative uncharacterized transposon-derived protein F52C9.6 OS=Caenorhabditis elegans GN=F52C9.6 PE=5 SV=1//3.69456e-10",0.961293007648,6.4116868348e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012786_T001","Zm00001d012786","sp|Q6NQJ6|RNR1_ARATH Ribonuclease II, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=RNR1 PE=2 SV=1//2.95122e-32",0.961805062277,6.0038569516e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046935_T001","Zm00001d046935","sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1//0",0.981250901181,1.76820589282E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053967_T001","Zm00001d053967","sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1//7.94859e-92",0.95634365726,1.16043944987E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049160_T001","Zm00001d049160","sp|O22056|SIGB_ARATH RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2//2.90666e-38",0.974844417243,7.60547820278e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003756_T001","Zm00001d003756","sp|Q96KR6|F210B_HUMAN Protein FAM210B OS=Homo sapiens GN=FAM210B PE=1 SV=2//3.24667e-09",0.958398954334,9.14995892831e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043778_T001","Zm00001d043778","sp|Q9SF38|PP222_ARATH Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana GN=HCF152 PE=2 SV=1//0",0.963598759617,4.73477359098E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023292_T005","Zm00001d023292","sp|Q8S9L5|TIG_ARATH Trigger factor-like protein TIG, Chloroplastic OS=Arabidopsis thaliana GN=TIG PE=2 SV=1//9.91078e-54",0.972037986139,1.2845314723e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042017_T002","Zm00001d042017","sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0963400 PE=3 SV=2//2.02962e-65",0.97615663329,5.83111028352e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052630_T001","Zm00001d052630","sp|Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140 OS=Arabidopsis thaliana GN=At3g49140 PE=1 SV=2//3.75859e-27",0.975824784343,6.24486038436e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029078_T001","Zm00001d029078",null,0.955230629901,1.31362452005e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048046_T002","Zm00001d048046","sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1//3.11418e-112",-0.969775763625,1.88809319107e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027230_T001","Zm00001d027230",null,0.957505546143,1.01601938773e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002147_T002","Zm00001d002147","sp|P94479|YNBB_BACSU Uncharacterized protein YnbB OS=Bacillus subtilis (strain 168) GN=ynbB PE=4 SV=2//1.79105e-110",0.98898241148,1.25513865967e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004440_T001","Zm00001d004440","sp|Q5KS50|NPH3_ORYSJ Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1//0",0.979786718303,2.56890038131E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047528_T002","Zm00001d047528","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//5.38652e-07",0.965982732843,3.38816383172e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048075_T001","Zm00001d048075",null,0.979450016582,2.78852716473e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018571_T003","Zm00001d018571",null,0.966382980627,3.19563230988e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044622_T003","Zm00001d044622","sp|Q8RWU5|FBL3_ARATH F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2 SV=1//7.11833e-146",-0.952420670589,1.77250579701E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045014_T005","Zm00001d045014","sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=2//5.50266e-66",0.966103676276,3.32903973277e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027904_T001","Zm00001d027904","sp|Q570B4|KCS10_ARATH 3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2//0",0.960578402265,7.0173192035E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032222_T002","Zm00001d032222","sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1//0",0.969599865923,1.94310125323E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043465_T011","Zm00001d043465","sp|P12629|RK13_SPIOL 50S ribosomal protein L13, chloroplastic OS=Spinacia oleracea GN=RPL13 PE=1 SV=1//5.42726e-86",0.978357361765,3.60637770758e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042526_T001","Zm00001d042526","sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1//7.94753e-07",0.974769234968,7.71883510442e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044217_T001","Zm00001d044217","sp|P82715|PPD5_ARATH PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana GN=PPD5 PE=1 SV=3//5.94214e-06",0.969060338383,2.119827891E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036224_T002","Zm00001d036224",null,0.954579753116,1.41037448809e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013425_T001","Zm00001d013425","sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2//5.54415e-09",0.982149363894,1.38533313709e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051453_T001","Zm00001d051453",null,0.973449839946,9.93735660426e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019613_T001","Zm00001d019613","sp|P47917|ZRP4_MAIZE O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1//5.57759e-70",0.963572520909,4.75165206737e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039064_T001","Zm00001d039064",null,0.978439410365,3.53902196437e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020957_T001","Zm00001d020957","sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1//1.1467e-62",0.965196180996,3.79336760892e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020957_T002","Zm00001d020957","sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1//1.1467e-62",0.95663096056,1.12330114965e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016072_T001","Zm00001d016072","sp|P24613|RK21_SPIOL 50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1//3.98937e-40",0.951366325259,1.97425905446e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016072_T002","Zm00001d016072","sp|P24613|RK21_SPIOL 50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1//3.98937e-40",0.970422484711,1.6964016103e-07]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G853305_T01","GRMZM5G853305","sp|A1E9W2|RK16_SORBI 50S ribosomal protein L16, chloroplastic OS=Sorghum bicolor GN=rpl16 PE=3 SV=1//3.12983e-82",0.979572963279,2.70666209445e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034868_T013","Zm00001d034868","sp|P46441|N2B_HAEIR Putative ATPase N2B OS=Haematobia irritans PE=2 SV=1//1.1052e-20",0.966606718651,3.09186342307e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045190_T001","Zm00001d045190","sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2//9.0552e-138",0.971734960874,1.35496713849E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029077_T002","Zm00001d029077","sp|O22928|PUSH_ARATH Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana GN=At2g30320 PE=3 SV=1//3.77542e-100",0.955397067042,1.28975127911E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016049_T002","Zm00001d016049","sp|Q9STT2|VPS29_ARATH Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana GN=VPS29 PE=2 SV=1//1.08145e-73",0.950981009177,2.05237334283e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021242_T001","Zm00001d021242",null,0.990115332365,7.30958404915e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009929_T001","Zm00001d009929","sp|Q6ATY4|U603_ORYSJ UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1//3.93098e-118",0.964355172266,4.26831062939e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005694_T001","Zm00001d005694",null,0.977989802503,3.92077237343e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012178_T001","Zm00001d012178","sp|Q56XR7|STR4A_ARATH Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana GN=STR4A PE=2 SV=1//1.1706e-52",0.976940063589,4.94055867328e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001843_T001","Zm00001d001843","sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica GN=TRX-X PE=2 SV=1//2.36156e-65",0.987074746567,2.78014322674e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052113_T002","Zm00001d052113","sp|Q6YZ49|RFA1A_ORYSJ Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica GN=RPA1A PE=1 SV=1//0",0.959498006856,8.01840560394e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048545_T008","Zm00001d048545","sp|Q8U4K7|PGK2_PYRFU 2-phosphoglycerate kinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pgk2 PE=3 SV=1//3.83071e-14",0.954213751952,1.4672113624e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047574_T001","Zm00001d047574","sp|Q9SKD9|WRK46_ARATH Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1//1.43307e-14",0.988757326098,1.38817268791e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000399_T002","Zm00001d000399","sp|P08823|RUBA_WHEAT RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1//0",0.956781463719,1.10422663457E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011780_T001","Zm00001d011780","sp|Q8DG98|RLMN_THEEB Probable dual-specificity RNA methyltransferase RlmN OS=Thermosynechococcus elongatus (strain BP-1) GN=rlmN PE=3 SV=1//7.03916e-118",0.972065148428,1.27836310648E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037830_T001","Zm00001d037830","sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1//3.49122e-42",0.958085867823,9.49445472465e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003839_T004","Zm00001d003839",null,0.956081745527,1.19513867336E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030127_T001","Zm00001d030127","sp|Q9FVQ4|PLGG1_ARATH Plastidal glycolate/glycerate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PLGG1 PE=2 SV=1//0",0.97409123376,8.80314297014e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011720_T002","Zm00001d011720","sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum GN=DDB_G0268948 PE=1 SV=2//6.12835e-16",0.956401771436,1.15284979207e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018544_T002","Zm00001d018544",null,0.984708631359,6.41773434396e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050715_T002","Zm00001d050715",null,0.965530750655,3.61655400294e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009771_T005","Zm00001d009771","sp|F4HYR3|CSCL6_ARATH CSC1-like protein At1g62320 OS=Arabidopsis thaliana GN=At1g62320 PE=3 SV=2//1.36287e-34",0.971725717549,1.357162982e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029706_T001","Zm00001d029706","sp|Q06398|GSTU6_ORYSJ Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2//9.43712e-51",0.959156627839,8.35724282666e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031951_T006","Zm00001d031951",null,0.983166385257,1.03493646986e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007921_T001","Zm00001d007921","sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2//8.80677e-96",0.963525239635,4.7821872462e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035916_T001","Zm00001d035916","sp|Q5VRN0|KCY1_ORYSJ Probable UMP/CMP kinase 1 OS=Oryza sativa subsp. japonica GN=Os06g0109600 PE=2 SV=1//3.84449e-93",0.951434961735,1.96059549595e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038084_T001","Zm00001d038084","sp|Q9LY66|RK1_ARATH 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1//2.7852e-144",0.97303355891,1.0733686695E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012307_T003","Zm00001d012307","sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3//1.59645e-23",0.979923333415,2.48382390211e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044774_T006","Zm00001d044774","sp|Q7RTR2|NLRC3_HUMAN Protein NLRC3 OS=Homo sapiens GN=NLRC3 PE=2 SV=2//8.04497e-11",0.950646644903,2.12212672146e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049282_T001","Zm00001d049282","sp|Q9SCP6|U73D1_ARATH UDP-glycosyltransferase 73D1 OS=Arabidopsis thaliana GN=UGT73D1 PE=3 SV=1//1.22996e-48",0.968564446057,2.2933225674e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024009_T002","Zm00001d024009","sp|Q2QVG9|CLPC2_ORYSJ Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC2 PE=2 SV=2//7.69588e-69",0.960932581088,6.71172208477e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012810_T002","Zm00001d012810","sp|Q9LD95|SIGF_ARATH RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana GN=SIGF PE=1 SV=1//5.82875e-86",0.966399516765,3.18786941289E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048599_T003","Zm00001d048599","sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2//1.50273e-38",0.988456546341,1.58327195798E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048599_T002","Zm00001d048599","sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2//1.50273e-38",0.973156120226,1.04941386914E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040567_T001","Zm00001d040567","sp|Q9LGV5|CIPK1_ORYSJ CBL-interacting protein kinase 1 OS=Oryza sativa subsp. japonica GN=CIPK1 PE=2 SV=1//0",0.970028443826,1.8112492528E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018146_T007","Zm00001d018146","sp|Q9FV50|MAP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1//1.4155e-10",0.982563241672,1.23286656439E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005170_T001","Zm00001d005170",null,0.960438317999,7.14119543721e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020693_T001","Zm00001d020693",null,0.970864475546,1.57455550598e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034892_T001","Zm00001d034892","sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1//0",0.961761010237,6.03810970556e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027352_T001","Zm00001d027352","sp|Q9ZPY1|PPOX2_ARATH Pyridoxine/pyridoxamine 5&apos;-phosphate oxidase 2 OS=Arabidopsis thaliana GN=PPOX2 PE=1 SV=2//3.01915e-79",0.969944232529,1.83657727915e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034903_T002","Zm00001d034903","sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1//6.7757e-11",-0.963968019758,4.50225375196e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008376_T003","Zm00001d008376","sp|Q8LAC4|URH2_ARATH Probable uridine nucleosidase 2 OS=Arabidopsis thaliana GN=URH2 PE=2 SV=1//5.85035e-33",0.962647889694,5.37769256237e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048314_T002","Zm00001d048314","sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=2 SV=1//0",-0.958998001612,8.5185083222e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032313_T001","Zm00001d032313","sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana GN=YLS8 PE=2 SV=1//1.89745e-99",0.950774655576,2.09520319738e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046837_T002","Zm00001d046837",null,0.969916635168,1.84493870847e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031963_T001","Zm00001d031963","sp|Q55535|Y328_SYNY3 Putative low molecular weight protein-tyrosine-phosphatase slr0328 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0328 PE=3 SV=1//5.61886e-43",0.983932914492,8.20862888773e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027349_T001","Zm00001d027349","sp|Q9SCP4|PP279_ARATH Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN=At3g53170 PE=3 SV=1//4.64879e-177",0.952347247603,1.78600186196E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052840_T018","Zm00001d052840","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//3.1662e-149",0.988658381591,1.45010226049E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016144_T005","Zm00001d016144","sp|Q9C8L2|FAP3_ARATH Fatty-acid-binding protein 3 OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1//2.52009e-42",0.960365043519,7.20668035914e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016144_T003","Zm00001d016144","sp|Q9C8L2|FAP3_ARATH Fatty-acid-binding protein 3 OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1//2.52009e-42",0.974612208641,7.95993471137e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034865_T001","Zm00001d034865","sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2 SV=1//2.79886e-25",0.96749941462,2.70417684245e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037984_T001","Zm00001d037984","sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1//1.58374e-23",0.982760518101,1.16507028469E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027460_T001","Zm00001d027460","sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus GN=Phrf1 PE=2 SV=2//3.3243e-07",0.975065018581,7.28049771581e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003986_T001","Zm00001d003986","sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1//1.34878e-10",0.987562081995,2.29596230916e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051252_T001","Zm00001d051252","sp|P08823|RUBA_WHEAT RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1//5.16528e-63",0.956557666791,1.13268449908e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045958_T001","Zm00001d045958","sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3//3.80992e-37",0.96350410882,4.79588427638e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032185_T001","Zm00001d032185","sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1//1.2637e-155",0.967642136822,2.64595796384e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013861_T002","Zm00001d013861",null,0.950063434308,2.24828313211e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043619_T001","Zm00001d043619","sp|Q42577|NDUS7_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Arabidopsis thaliana GN=At5g11770 PE=2 SV=1//3.83041e-37",0.973608051017,9.64735265008e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037361_T001","Zm00001d037361",null,0.964896949109,3.95726591051e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046764_T001","Zm00001d046764","sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1//0",0.970680217043,1.62447360896e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004782_T005","Zm00001d004782","sp|A1DMI8|CREC_NEOFI Probable catabolite repression protein creC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=creC PE=3 SV=1//3.20021e-46",-0.955471255802,1.27922147267E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037937_T001","Zm00001d037937","sp|Q9M015|Y5161_ARATH Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1//1.20537e-09",0.982287055714,1.33302981986E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000417_T001","Zm00001d000417","sp|P48183|PSBA_MAIZE Photosystem II protein D1 OS=Zea mays GN=psbA PE=1 SV=1//0",0.954056997831,1.49210291056E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053376_T006","Zm00001d053376","sp|O22034|CFXQ2_CYACA Protein cfxQ homolog OS=Cyanidium caldarium GN=cfxQ PE=3 SV=1//1.0902e-16",0.970685239237,1.62309654161e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044510_T010","Zm00001d044510","sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2 SV=2//3.64592e-12",-0.961564163423,6.19307086651e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037208_T002","Zm00001d037208","sp|Q9LDN2|UMPS1_ORYSJ Uridine 5&apos;-monophosphate synthase OS=Oryza sativa subsp. japonica GN=UMPS1 PE=2 SV=1//1.49422e-14",0.975629645707,6.49886628956e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040570_T001","Zm00001d040570",null,0.967113589514,2.86667694471e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035767_T001","Zm00001d035767","sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1//1.39482e-54",0.95775209122,9.87297859911e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039197_T001","Zm00001d039197",null,0.955584709112,1.26325082439E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024786_T001","Zm00001d024786",null,0.986390513452,3.59403884431e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014572_T002","Zm00001d014572","sp|Q84MB6|DIOX2_ARATH Probable 2-oxoglutarate-dependent dioxygenase At3g49630 OS=Arabidopsis thaliana GN=At3g50210 PE=2 SV=1//1.48311e-52",0.978580012453,3.425932249e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031130_T001","Zm00001d031130","sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2//0",0.968324165928,2.38135323016e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008397_T001","Zm00001d008397",null,0.960777405958,6.84428233866e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028924_T001","Zm00001d028924","sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1//1.57508e-78",0.990528907427,5.90722137872e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007058_T010","Zm00001d007058","sp|Q9FGK3|MO25N_ARATH Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1//1.26704e-07",0.98075610709,2.01249472642e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042478_T002","Zm00001d042478","sp|Q9FLP9|GGAP2_ARATH GDP-L-galactose phosphorylase 2 OS=Arabidopsis thaliana GN=VTC5 PE=1 SV=1//4.29673e-127",0.97962243231,2.67426845113e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022237_T001","Zm00001d022237","sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1//1.67339e-76",0.978893104277,3.18443946767e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046940_T001","Zm00001d046940","sp|Q9SCY2|FKB13_ARATH Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana GN=FKBP13 PE=1 SV=2//2.7323e-62",0.975703696001,6.40152655329e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014763_T001","Zm00001d014763","sp|Q8K582|DUS1L_RAT tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus GN=Dus1l PE=2 SV=1//1.54045e-86",0.970597543274,1.64727643082e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053953_T001","Zm00001d053953",null,0.969605488357,1.94132346198e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042117_T002","Zm00001d042117","sp|P17817|P5CR_SOYBN Pyrroline-5-carboxylate reductase OS=Glycine max PE=2 SV=1//4.95876e-78",0.96697505157,2.92688445258e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032165_T005","Zm00001d032165","sp|Q86JM4|DCN1M_DICDI DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016 PE=3 SV=1//7.55104e-17",0.956331700304,1.16200592615E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024674_T001","Zm00001d024674","sp|Q9LPZ1|MORF9_ARATH Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana GN=MORF9 PE=1 SV=1//1.28729e-84",0.96632762992,3.22172619249E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049766_T001","Zm00001d049766","sp|Q9LVD4|ORP4C_ARATH Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana GN=ORP4C PE=2 SV=1//4.58701e-117",-0.954236500621,1.46362657323e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017205_T007","Zm00001d017205",null,0.950209365885,2.21617270602e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010821_T007","Zm00001d010821","sp|Q0WVX5|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS4 PE=2 SV=1//0",0.954566623542,1.41238269302E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021659_T005","Zm00001d021659","sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1//2.81421e-25",-0.959802062853,7.72588763501E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043707_T001","Zm00001d043707","sp|Q8VZV9|PTA7_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1//3.44218e-35",0.985491928181,4.94047425192e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031535_T001","Zm00001d031535","sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1//2.68671e-91",0.957168194986,1.05639031522e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016854_T001","Zm00001d016854","sp|A2Y3Q5|HEMH_ORYSI Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2//8.06761e-58",0.975031000118,7.32987728291e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049660_T002","Zm00001d049660","sp|Q9LNA5|ACR8_ARATH ACT domain-containing protein ACR8 OS=Arabidopsis thaliana GN=ACR8 PE=2 SV=1//2.9731e-144",-0.957275537351,1.04340894262E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042454_T001","Zm00001d042454",null,0.990185403832,7.05497438247e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029297_T001","Zm00001d029297","sp|Q8RWN7|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2//2.99553e-118",-0.961205953433,6.48315833559e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048007_T003","Zm00001d048007","sp|O81004|Y2287_ARATH GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2//3.21522e-53",0.950613205883,2.12920469433E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025170_T001","Zm00001d025170","sp|Q40731|STAD5_ORYSJ Acyl-[acyl-carrier-protein] desaturase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0379900 PE=2 SV=2//0",-0.965597873641,3.58188377234e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008975_T002","Zm00001d008975","sp|Q9M084|SYDC2_ARATH Aspartate--tRNA ligase 2, cytoplasmic OS=Arabidopsis thaliana GN=IBI1 PE=1 SV=1//2.29451e-73",-0.972477067791,1.18767393631E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008105_T001","Zm00001d008105",null,0.953536414294,1.57718264049e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018096_T001","Zm00001d018096","sp|Q9SWI6|RK29_MAIZE 50S ribosomal protein L29, chloroplastic OS=Zea mays GN=RPL29 PE=2 SV=1//4.11961e-65",0.960731866316,6.88357730372e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040090_T001","Zm00001d040090","sp|Q7Y0V9|ROC4_ORYSJ Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2//0",0.989761665616,8.7090734624e-10]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G877454_T01","GRMZM5G877454","sp|P16023|RPOB_MAIZE DNA-directed RNA polymerase subunit beta OS=Zea mays GN=rpoB PE=3 SV=1//0",0.973499767503,9.84509895829e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020827_T001","Zm00001d020827","sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1//4.69754e-179",0.959427461927,8.08751432491E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002333_T005","Zm00001d002333","sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3//3.45766e-46",0.982587182222,1.22447536555E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011541_T008","Zm00001d011541","sp|O49500|MBR2_ARATH E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1//6.91516e-08",0.956913350677,1.08772375351e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036894_T001","Zm00001d036894","sp|Q69XJ4|HMOX1_ORYSJ Heme oxygenase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=HO1 PE=2 SV=1//5.51755e-138",0.97382555256,9.25971186394e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038606_T001","Zm00001d038606",null,0.950443151901,2.16548995846e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018632_T001","Zm00001d018632","sp|Q69LA6|PDX11_ORYSJ Probable pyridoxal 5&apos;-phosphate synthase subunit PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1//0",0.967996779278,2.50560197035E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006601_T001","Zm00001d006601",null,0.98450917268,6.84506851201e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051238_T001","Zm00001d051238","sp|P80680|FTRV_MAIZE Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays PE=1 SV=1//4.14497e-47",0.986206769126,3.84211551463e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040383_T003","Zm00001d040383",null,0.980624125801,2.0819983737e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040383_T005","Zm00001d040383",null,0.96240628819,5.55160921234e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019251_T001","Zm00001d019251","sp|Q8W2B7|BX8_MAIZE DIMBOA UDP-glucosyltransferase BX8 OS=Zea mays GN=Bx8 PE=1 SV=1//1.14853e-117",0.956940612637,1.08433704793E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045544_T001","Zm00001d045544","sp|P21240|CPNB1_ARATH Chaperonin 60 subunit beta 1, chloroplastic OS=Arabidopsis thaliana GN=CPN60B1 PE=1 SV=3//0",0.964128922817,4.40381926481e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005578_T001","Zm00001d005578",null,0.967167867495,2.84335857081e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047761_T006","Zm00001d047761","sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1//4.86584e-09",0.978653400721,3.36805943135e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047761_T005","Zm00001d047761","sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1//4.86584e-09",0.96537489612,3.69808541567e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043110_T015","Zm00001d043110","sp|Q5JK35|BGL05_ORYSJ Beta-glucosidase 5 OS=Oryza sativa subsp. japonica GN=BGLU5 PE=2 SV=1//2.74413e-06",0.963231327325,4.9755186371e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018452_T001","Zm00001d018452","sp|Q6NPT8|PP2B1_ARATH F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1//6.17144e-54",-0.953365341893,1.60596585109e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039866_T002","Zm00001d039866",null,0.954886044992,1.36416556873e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009800_T001","Zm00001d009800","sp|Q2VZE7|APAG_MAGSA Protein ApaG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=apaG PE=3 SV=1//5.07879e-30",0.978525945671,3.4690733397e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052266_T001","Zm00001d052266","sp|Q9H8H3|MET7A_HUMAN Methyltransferase-like protein 7A OS=Homo sapiens GN=METTL7A PE=1 SV=1//1.42958e-34",0.958766339515,8.75845572512e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047220_T001","Zm00001d047220","sp|Q75LR7|SAPK1_ORYSJ Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1//0",0.958689023968,8.83972003152e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011189_T001","Zm00001d011189",null,0.965117745842,3.83579685792e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030588_T001","Zm00001d030588",null,-0.950645169525,2.12243861785e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012922_T003","Zm00001d012922","sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2//0",0.976464154032,5.46747800367E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014449_T002","Zm00001d014449","sp|Q339W7|LHP1_ORYSJ Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE=3 SV=1//9.93542e-08",0.961360745724,6.35650819536e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042842_T004","Zm00001d042842","sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1//2.48193e-52",0.982668139032,1.19643677188e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042842_T006","Zm00001d042842","sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1//2.48193e-52",0.969230850978,2.06264798575e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025130_T001","Zm00001d025130","sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2 SV=1//5.84836e-29",0.977884581318,4.01468018829e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041804_T001","Zm00001d041804","sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1//3.6366e-118",0.957905405454,9.69765089565e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015127_T001","Zm00001d015127","sp|Q05024|TRI1_YEAST Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRI1 PE=1 SV=1//4.16854e-10",0.961746373634,6.04952473005e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011166_T001","Zm00001d011166",null,0.975330736309,6.90384331925e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012820_T001","Zm00001d012820","sp|B8ANR3|OEP24_ORYSI Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica GN=OEP24 PE=3 SV=1//5.32983e-112",0.97632561261,5.62899080681E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015613_T001","Zm00001d015613","sp|Q9SHU7|TIC21_ARATH Protein TIC 21, chloroplastic OS=Arabidopsis thaliana GN=TIC21 PE=1 SV=1//2.26512e-82",0.991036086049,4.48992842905E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011880_T002","Zm00001d011880","sp|Q7JUR6|GDAP2_DROME Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1//5.67157e-10",0.970521935233,1.66835276039e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000349_T001","Zm00001d000349","sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays GN=SECY PE=2 SV=1//2.58815e-112",0.981812505513,1.52021355504E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029254_T001","Zm00001d029254","sp|Q8LBI9|EDL16_ARATH Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2//9.21443e-173",0.978211942753,3.72826360895e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040409_T001","Zm00001d040409",null,0.975533002559,6.62767432047e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006402_T003","Zm00001d006402","sp|P00827|ATPB_MAIZE ATP synthase subunit beta, chloroplastic OS=Zea mays GN=atpB PE=3 SV=1//0",0.957923114669,9.67755930059e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010859_T001","Zm00001d010859","sp|Q9Z2Y8|PROSC_MOUSE Proline synthase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1//3.10715e-62",0.980369530558,2.22147598095e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028895_T001","Zm00001d028895","sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1//6.55372e-134",0.957711568468,9.91973771569e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025340_T004","Zm00001d025340","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//4.39237e-36",0.983787418354,8.58499449308e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025340_T003","Zm00001d025340","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//4.39237e-36",0.983318485792,9.89270176888e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019648_T002","Zm00001d019648","sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1//2.21063e-93",0.974991255149,7.38790668642e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047506_T018","Zm00001d047506","sp|Q9AYT5|RSH1_ORYSJ Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica GN=RSH1 PE=2 SV=1//2.11781e-118",0.96165122659,6.12414829515e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033317_T001","Zm00001d033317","sp|Q9XFJ8|TATA_MAIZE Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays GN=TATA PE=1 SV=1//8.68615e-45",0.99061619497,5.64080337995e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031308_T001","Zm00001d031308","sp|Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15 OS=Arabidopsis thaliana GN=COX15 PE=2 SV=1//2.7492e-40",-0.974233808248,8.56563350973e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025616_T001","Zm00001d025616","sp|O48609|RRP3_HORVU 30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare GN=PSRP3 PE=2 SV=1//5.23593e-66",0.989218798827,1.12659170881e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049387_T001","Zm00001d049387","sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1//6.30456e-43",0.988757164599,1.3882717198e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047482_T001","Zm00001d047482","sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1//0",-0.965673146995,3.54331867806e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028665_T001","Zm00001d028665",null,0.956866625922,1.09354781652e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000840_T001","Zm00001d000840",null,0.972976803648,1.08460804338E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047128_T002","Zm00001d047128","sp|Q03523|MURE_BACSU UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase OS=Bacillus subtilis (strain 168) GN=murE PE=3 SV=1//1.89851e-48",0.95432636321,1.44953371128e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017522_T001","Zm00001d017522","sp|Q6ESI7|TPPII_ORYSJ Tripeptidyl-peptidase 2 OS=Oryza sativa subsp. japonica GN=TPP2 PE=2 SV=1//9.03082e-68",0.974187343472,8.64246967325e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001375_T001","Zm00001d001375",null,0.980526235406,2.13477471256E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039456_T001","Zm00001d039456",null,0.969068168672,2.11717475107E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030074_T001","Zm00001d030074","sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP3 PE=3 SV=1//4.524e-121",0.970820055566,1.58647621262E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043389_T001","Zm00001d043389","sp|Q68Y49|CIPKJ_ORYSJ CBL-interacting protein kinase 19 OS=Oryza sativa subsp. japonica GN=CIPK19 PE=1 SV=1//0",0.953245996313,1.62629156097E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049103_T001","Zm00001d049103",null,-0.958362267063,9.18980516928e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041365_T001","Zm00001d041365","sp|B8A8D2|BBD1_ORYSI Bifunctional nuclease 1 OS=Oryza sativa subsp. indica GN=BBD1 PE=3 SV=1//1.25726e-32",0.974768165058,7.72045791742e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003373_T001","Zm00001d003373","sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1//5.74617e-86",0.956807940609,1.10089776584E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041365_T003","Zm00001d041365","sp|B8A8D2|BBD1_ORYSI Bifunctional nuclease 1 OS=Oryza sativa subsp. indica GN=BBD1 PE=3 SV=1//1.25726e-32",0.986775914974,3.11517633911e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040215_T001","Zm00001d040215","sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=1 SV=2//5.67387e-29",0.981943602232,1.46653131861e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044327_T003","Zm00001d044327","sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1//1.10974e-18",0.950792735946,2.09142242613e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053968_T006","Zm00001d053968","sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1 OS=Arabidopsis thaliana GN=RIN1 PE=1 SV=1//2.13963e-17",0.955000328952,1.34723523115E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048473_T002","Zm00001d048473","sp|Q42551|SCE1_ARATH SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1//9.92781e-21",0.9631605876,5.02296483518e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027544_T002","Zm00001d027544","sp|Q05753|AKRP_ARATH Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2//1.64736e-101",0.962121280627,5.76248739836e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027850_T003","Zm00001d027850","sp|P51281|YCF45_PORPU Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1//1.54726e-129",0.963488245911,4.8061871194e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028344_T002","Zm00001d028344","sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1//0",0.961382155474,6.33914677639e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043348_T022","Zm00001d043348","sp|Q9URY7|FMDA_SCHPO Putative formamidase C869.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC869.04 PE=3 SV=1//7.72946e-12",0.966267137063,3.25043774119e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042978_T001","Zm00001d042978","sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2 SV=1//9.47757e-19",0.955607498631,1.26006195456E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049443_T007","Zm00001d049443","sp|Q6ZAR0|ROC1_ORYSJ Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica GN=ROC1 PE=2 SV=1//0",0.964958781063,3.92294573714e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034424_T001","Zm00001d034424","sp|Q9SKZ5|FBT1_ARATH Folate-biopterin transporter 1, chloroplastic OS=Arabidopsis thaliana GN=At2g32040 PE=1 SV=2//1.63455e-57",0.951352075391,1.97710523953e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049138_T001","Zm00001d049138",null,0.972718784045,1.13689182513E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003866_T001","Zm00001d003866",null,0.962982944496,5.1436996662e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005972_T008","Zm00001d005972","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//6.10531e-43",0.971144026998,1.50116003184e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025980_T013","Zm00001d025980","sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=2 SV=1//1.18171e-59",0.955225426778,1.31437645323E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053743_T003","Zm00001d053743",null,0.974281888515,8.48669969855e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031809_T002","Zm00001d031809","sp|Q9SCS3|PGML4_ARATH Phosphoglycerate mutase-like protein 4 OS=Arabidopsis thaliana GN=At3g50520 PE=2 SV=1//1.20226e-23",0.963220248493,4.98292575202e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019057_T001","Zm00001d019057","sp|Q67YC9|Y4141_ARATH Uncharacterized protein At4g14100 OS=Arabidopsis thaliana GN=At4g14100 PE=2 SV=1//2.53884e-32",0.952080478524,1.83572513013E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009733_T001","Zm00001d009733","sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1//1.74257e-73",0.953326815525,1.612505105E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046334_T001","Zm00001d046334","sp|Q43135|C79A1_SORBI Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3//0",0.967832453127,2.56988061054e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d026608_T001","Zm00001d026608","sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica GN=TRX-X PE=2 SV=1//4.37457e-65",0.963291113939,4.93569725535e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048524_T001","Zm00001d048524","sp|A6MVV9|CEMA_RHDSA Chloroplast envelope membrane protein OS=Rhodomonas salina GN=cemA PE=3 SV=1//2.11889e-33",0.961163282322,6.51842173349e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034766_T001","Zm00001d034766","sp|Q9LJE2|SYKM_ARATH Lysine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA5 PE=2 SV=1//1.64095e-99",0.967539054449,2.68790586233e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050317_T001","Zm00001d050317","sp|Q9ZTA3|AOP1C_ARATH Probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Arabidopsis thaliana GN=AOP1 PE=2 SV=1//9.92894e-27",-0.959981233042,7.55752800732e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034758_T001","Zm00001d034758","sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1//3.69778e-85",-0.95323744543,1.62775565713E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021784_T001","Zm00001d021784","sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1//2.21208e-176",0.951398551865,1.96783428574E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053611_T001","Zm00001d053611","sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3//6.23316e-21",0.959826069716,7.70315803589e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049910_T003","Zm00001d049910","sp|Q9LYT3|TT12_ARATH Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1//8.48945e-92",0.97404515124,8.88102142937E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031696_T001","Zm00001d031696","sp|O22870|FK163_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-3 PE=1 SV=2//8.46631e-73",0.963597543101,4.7355550814e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028785_T001","Zm00001d028785","sp|Q9M015|Y5161_ARATH Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1//3.73405e-80",-0.955241494724,1.31205548315e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036145_T003","Zm00001d036145","sp|Q9XIK3|ISCAP_ARATH Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA PE=2 SV=2//9.73975e-47",0.954420103957,1.43494762939e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027445_T002","Zm00001d027445","sp|O82359|LCKB2_ARATH Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana GN=LCKB2 PE=2 SV=1//4.22677e-08",0.980414869094,2.19610778451E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002501_T001","Zm00001d002501",null,0.954060441393,1.49155251972e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032383_T001","Zm00001d032383","sp|Q84QU8|PPT2_ORYSJ Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1//0",0.985430914618,5.0447215294e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049857_T002","Zm00001d049857","sp|Q0WQK2|ZDHC9_ARATH Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana GN=PAT07 PE=1 SV=1//7.31662e-171",-0.95140339102,1.96687097466e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002426_T002","Zm00001d002426","sp|Q9THX6|TL29_SOLLC Thylakoid lumenal 29 kDa protein, chloroplastic OS=Solanum lycopersicum GN=CLEB3J9 PE=3 SV=1//6.84593e-150",0.965473643128,3.64626070226e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039076_T001","Zm00001d039076",null,0.990780175188,5.16628961833E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003929_T001","Zm00001d003929",null,-0.957427226201,1.0252808597E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009726_T002","Zm00001d009726","sp|Q54T49|APT11_DICDI Acyl-protein thioesterase 1 homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282005 PE=2 SV=1//4.4299e-26",0.984064130828,7.88060283696e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044666_T001","Zm00001d044666","sp|Q40412|ABA2_NICPL Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1//4.4322e-06",0.986474615415,3.48484441304e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031494_T002","Zm00001d031494","sp|Q8GY91|APX6_ARATH Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1//2.38038e-15",0.995042644448,2.33835173447e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034343_T001","Zm00001d034343","sp|Q5NAY4|HISX_ORYSJ Histidinol dehydrogenase, chloroplastic OS=Oryza sativa subsp. japonica GN=HDH PE=2 SV=1//2.94553e-125",0.954899545152,1.3621568693E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017179_T001","Zm00001d017179",null,0.960562279514,7.03148893333e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042049_T003","Zm00001d042049","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//5.09495e-48",0.976086006777,5.91728221977e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021715_T001","Zm00001d021715","sp|Q9LVY0|PRFB1_ARATH Peptide chain release factor PrfB1, chloroplastic OS=Arabidopsis thaliana GN=PRFB1 PE=2 SV=1//0",0.975167402999,7.13347829695e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032310_T001","Zm00001d032310","sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1//2.52792e-96",-0.964296459808,4.30315251894e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020414_T001","Zm00001d020414","sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1//0",0.953353985738,1.6078911913E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012287_T001","Zm00001d012287",null,0.95607558267,1.19596495907E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013446_T001","Zm00001d013446",null,0.978428074368,3.5482677907e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044228_T001","Zm00001d044228","sp|Q41739|THI42_MAIZE Thiamine thiazole synthase 2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1//0",0.961405605981,6.32017374436e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021703_T001","Zm00001d021703","sp|Q41048|PSBQ1_MAIZE Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1//8.66489e-127",0.959072946172,8.4420116897e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011876_T001","Zm00001d011876","sp|Q9SR43|PFBS_ARATH Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana GN=HY2 PE=2 SV=1//1.05491e-105",0.967039512183,2.89874652726e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043968_T001","Zm00001d043968","sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1//2.09995e-18",0.95039764242,2.17528322866e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002854_T001","Zm00001d002854","sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE=2 SV=2//7.61456e-70",0.978888678107,3.18775605912e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050810_T001","Zm00001d050810","sp|Q9LSV0|GLYR1_ARATH Glyoxylate/succinic semialdehyde reductase 1 OS=Arabidopsis thaliana GN=GLYR1 PE=1 SV=1//1.22943e-113",0.972667521658,1.14751427027E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017449_T001","Zm00001d017449","sp|P82413|RK19_SPIOL 50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=2//1.82976e-48",0.984860713772,6.1064340251e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023538_T002","Zm00001d023538","sp|Q9CAP8|LACS9_ARATH Long chain acyl-CoA synthetase 9, chloroplastic OS=Arabidopsis thaliana GN=LACS9 PE=2 SV=1//1.20428e-16",0.95113088526,2.02170336738e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018464_T001","Zm00001d018464",null,0.979000956389,3.10446985896e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002690_T001","Zm00001d002690","sp|Q9XF59|PIP12_MAIZE Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1//0",-0.960409446002,7.1669414651e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005688_T001","Zm00001d005688","sp|Q9ZVX4|U90A1_ARATH UDP-glycosyltransferase 90A1 OS=Arabidopsis thaliana GN=UGT90A1 PE=2 SV=1//5.45041e-97",0.968740283438,2.23055813597e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018366_T001","Zm00001d018366","sp|P72874|IF3_SYNY3 Translation initiation factor IF-3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=infC PE=3 SV=1//2.86646e-22",0.97091041072,1.56230327564E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012088_T001","Zm00001d012088",null,0.963145777977,5.03294324439e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029955_T001","Zm00001d029955","sp|O23522|PLA14_ARATH Phospholipase A1-Ibeta2, chloroplastic OS=Arabidopsis thaliana GN=At4g16820 PE=1 SV=2//2.89219e-117",0.950616774643,2.12844841041e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039416_T001","Zm00001d039416","sp|Q99685|MGLL_HUMAN Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2//1.27426e-32",-0.963194607524,5.00010248148e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024248_T003","Zm00001d024248","sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2//1.61946e-07",0.977024522454,4.85143194506e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023583_T005","Zm00001d023583","sp|Q84N64|ARC5_ARATH Dynamin-like protein ARC5 OS=Arabidopsis thaliana GN=ARC5 PE=1 SV=2//4.67553e-36",0.979109840033,3.02536755648e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053545_T003","Zm00001d053545","sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.15 PE=3 SV=2//3.22165e-09",0.976160950591,5.8258753155e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019454_T001","Zm00001d019454","sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1//3.52721e-126",0.974098096964,8.79159101075e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015095_T001","Zm00001d015095",null,0.979153312276,2.99423814631e-08]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G853723_T01","GRMZM5G853723","sp|P25709|NDHH_MAIZE NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Zea mays GN=ndhH PE=3 SV=1//0",0.956173646703,1.18287069162E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000804_T001","Zm00001d000804",null,0.958114291463,9.46276104141e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021507_T002","Zm00001d021507","sp|O48593|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SYNO PE=2 SV=3//0",0.965763231958,3.49759992968E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018613_T004","Zm00001d018613","sp|Q9LHL3|LRP6C_ARATH La-related protein 6C OS=Arabidopsis thaliana GN=LARP6C PE=3 SV=1//1.49826e-66",0.972552092417,1.17172262559E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047761_T012","Zm00001d047761","sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1//4.86584e-09",0.967825133649,2.57277394944e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046336_T001","Zm00001d046336","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//1.39339e-92",0.967937169054,2.52876978912e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042801_T001","Zm00001d042801","sp|F4HW02|GAT1_ARATH GABA transporter 1 OS=Arabidopsis thaliana GN=GAT1 PE=1 SV=1//1.07463e-174",0.97551904601,6.64644277393e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016411_T001","Zm00001d016411","sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2//0",0.974996457046,7.38029091174e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010305_T004","Zm00001d010305","sp|Q40153|LE14B_LITER LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1//1.35792e-78",0.961004063023,6.65134824995e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050350_T001","Zm00001d050350","sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1//7.50625e-14",0.957062410999,1.06930836008e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010622_T001","Zm00001d010622","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//2.26208e-14",0.951492490511,1.94920103813e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002953_T002","Zm00001d002953",null,0.959518962001,7.99796771478e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008003_T001","Zm00001d008003",null,0.968173396411,2.43794853194E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021724_T001","Zm00001d021724",null,0.956008218614,1.20502640533e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038825_T001","Zm00001d038825","sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2//2.60532e-33",0.967334206361,2.77283585426e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016019_T001","Zm00001d016019",null,0.956473283627,1.14356450709e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013590_T001","Zm00001d013590","sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM OS=Arabidopsis thaliana GN=GN PE=1 SV=1//0",-0.959031095117,8.48466187999e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044970_T001","Zm00001d044970","sp|Q9ZVN4|Y1500_ARATH Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1//1.88602e-84",0.987899874801,2.00180272358E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018756_T001","Zm00001d018756","sp|Q49AM1|MTEF2_HUMAN Transcription termination factor 2, mitochondrial OS=Homo sapiens GN=MTERF2 PE=1 SV=2//1.10354e-07",0.970622907818,1.64025354188E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022203_T001","Zm00001d022203",null,0.959484456988,8.0316430795e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031969_T001","Zm00001d031969","sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1//6.5684e-82",0.970895024077,1.56639885063e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031997_T001","Zm00001d031997","sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1//1.85543e-111",0.977813595069,4.0790401945e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008706_T001","Zm00001d008706","sp|P23993|PSAL_HORVU Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1//8.77823e-107",0.971581932473,1.39168691682E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017982_T001","Zm00001d017982","sp|B9DFG3|ISE2_ARATH DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic OS=Arabidopsis thaliana GN=ISE2 PE=1 SV=2//0",0.952027016029,1.84582081597e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043449_T001","Zm00001d043449","sp|P71020|YLMH_BACSU Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) GN=ylmH PE=3 SV=1//4.69815e-19",0.982584292894,1.2254856685E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043880_T001","Zm00001d043880",null,0.973382941708,1.00620511034e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044289_T002","Zm00001d044289",null,0.95474064989,1.38594840049E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043182_T001","Zm00001d043182","sp|Q8S2G0|ISPE_ORYSJ 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPE PE=2 SV=1//2.57315e-71",0.975010794738,7.35933245455e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003618_T001","Zm00001d003618",null,0.991006625732,4.56397364346e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006886_T002","Zm00001d006886","sp|Q9FR37|AMI1_ARATH Amidase 1 OS=Arabidopsis thaliana GN=AMI1 PE=1 SV=1//4.09299e-36",0.976782562266,5.11024786931e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028954_T001","Zm00001d028954","sp|Q10M74|GMK2_ORYSJ Guanylate kinase 2, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=V2 PE=1 SV=1//1.08544e-144",0.951128153432,2.02225912438e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d043970_T001","Zm00001d043970","sp|Q8GYN9|MENB_ARATH 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis thaliana GN=MENB PE=1 SV=2//9.34917e-173",0.953896061018,1.51800610348e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d022666_T001","Zm00001d022666","sp|A1E9R2|PSBM_SORBI Photosystem II reaction center protein M OS=Sorghum bicolor GN=psbM PE=3 SV=1//8.79381e-12",0.974144820897,8.71326693019e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033594_T001","Zm00001d033594",null,0.971857339597,1.32616053472e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012205_T001","Zm00001d012205","sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1//1.02724e-23",0.965405712754,3.68184966959e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002532_T003","Zm00001d002532","sp|Q7XP59|GLR31_ORYSJ Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1//0",0.954547124533,1.41536930753e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002532_T004","Zm00001d002532","sp|Q7XP59|GLR31_ORYSJ Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1//0",0.955991383858,1.20729941466e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023559_T001","Zm00001d023559","sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2//0",0.983984997765,8.07714828355e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051785_T001","Zm00001d051785","sp|O04616|CUT1A_ARATH Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1//1.6291e-48",0.985956033245,4.20249191002E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d042257_T001","Zm00001d042257","sp|Q9FG89|PNSB5_ARATH Photosynthetic NDH subunit of subcomplex B 5, chloroplastic OS=Arabidopsis thaliana GN=PNSB5 PE=2 SV=1//1.13768e-64",0.9865279831680001,3.41693873196e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d027427_T002","Zm00001d027427","sp|Q42551|SCE1_ARATH SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1//1.43021e-96",0.961443741048,6.28941629444e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052401_T001","Zm00001d052401","sp|Q66GQ6|IP5P5_ARATH Type I inositol polyphosphate 5-phosphatase 5 OS=Arabidopsis thaliana GN=IP5P5 PE=2 SV=1//2.10491e-10",0.963550697922,4.76572646235e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014736_T001","Zm00001d014736","sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1//3.25807e-12",0.968331539109,2.37861256913E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013135_T002","Zm00001d013135","sp|Q9FI13|RPI4_ARATH Probable ribose-5-phosphate isomerase 4, chloroplastic OS=Arabidopsis thaliana GN=RPI4 PE=2 SV=1//1.08265e-76",0.990110186305,7.32856886287e-10]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G879235_T01","GRMZM5G879235","sp|P09562|RPOA_MAIZE DNA-directed RNA polymerase subunit alpha OS=Zea mays GN=rpoA PE=1 SV=2//0",0.981598688483,1.61112136965e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051807_T001","Zm00001d051807","sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1//1.87415e-09",0.969430734177,1.99718879657e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011673_T001","Zm00001d011673","sp|P49353|FPPS_MAIZE Farnesyl pyrophosphate synthase OS=Zea mays GN=FPS PE=2 SV=1//0",0.959302759116,8.21083519176E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015929_T002","Zm00001d015929","sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=typA PE=3 SV=1//2.21073e-36",0.970948755874,1.55213374597E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052061_T001","Zm00001d052061","sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus GN=CYPRO4 PE=2 SV=1//0",-0.958940280893,8.57779887917e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d029218_T001","Zm00001d029218","sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1//2.1512e-88",0.971291498147,1.46355467079E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005099_T003","Zm00001d005099","sp|Q6GLA2|SAMC_XENTR S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1//4.13206e-07",0.98169134555,1.57120934041e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049960_T001","Zm00001d049960","sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Oryza sativa subsp. japonica GN=Os07g0688000 PE=2 SV=1//7.9138e-169",0.989128933859,1.17415699386e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037786_T001","Zm00001d037786","sp|Q5NB82|NLP3_ORYSJ Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1//0",-0.972954756223,1.08899933497e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017097_T001","Zm00001d017097","sp|Q0WWT7|STR11_ARATH Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana GN=STR11 PE=2 SV=1//9.49934e-63",0.954998463825,1.34751019076E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020134_T002","Zm00001d020134","sp|A3BXL8|AB53G_ORYSJ ABC transporter G family member 53 OS=Oryza sativa subsp. japonica GN=ABCG53 PE=2 SV=1//1.36166e-27",0.977636179523,4.2434958214e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018242_T001","Zm00001d018242","sp|Q6Z7K5|MTP3_ORYSJ Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1//0",0.956288408976,1.16769155412e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012673_T001","Zm00001d012673",null,0.985634923127,4.70288119558e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044606_T001","Zm00001d044606","sp|Q2QX01|GRS12_ORYSJ Monothiol glutaredoxin-S12, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXS12 PE=2 SV=1//1.0937e-152",0.985942886722,4.22210533202e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012673_T002","Zm00001d012673",null,0.960813812271,6.81299666017e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001741_T001","Zm00001d001741",null,0.96582317389,3.46743981972e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033170_T002","Zm00001d033170","sp|Q8LE94|RING3_ARATH E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1//7.01772e-23",0.973362300166,1.01007762154E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038163_T036","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.960203718096,7.35253775641e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010054_T001","Zm00001d010054","sp|Q0PGJ6|AKRC9_ARATH Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1//3.03466e-29",0.963867199529,4.56481769717e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018781_T001","Zm00001d018781","sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1//1.6224e-62",0.969805875765,1.87880184521E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047442_T001","Zm00001d047442",null,0.963946761284,4.51538862523E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024307_T007","Zm00001d024307","sp|Q940S3|UAP1_ARATH UDP-N-acetylglucosamine diphosphorylase 1 OS=Arabidopsis thaliana GN=GLCNAC1PUT1 PE=1 SV=1//0",0.962143605154,5.74574316126e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038835_T001","Zm00001d038835","sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1//1.21775e-27",0.953380792141,1.60334933019e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005270_T001","Zm00001d005270","sp|Q9ZVN4|Y1500_ARATH Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1//4.52533e-88",0.9818454193,1.50659085207e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012646_T001","Zm00001d012646",null,0.975987957055,6.03859227066e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001837_T001","Zm00001d001837","sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1//1.21802e-49",0.954905277783,1.36130461703e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024109_T001","Zm00001d024109","sp|P93394|UPP_TOBAC Uracil phosphoribosyltransferase OS=Nicotiana tabacum GN=UPP PE=2 SV=1//1.25341e-99",0.973498683203,9.84709527252e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041961_T001","Zm00001d041961",null,0.985549143749,4.8442851952e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025980_T007","Zm00001d025980","sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=2 SV=1//1.18171e-59",0.954070742261,1.48990707416E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028298_T001","Zm00001d028298",null,0.990897867009,4.84581264004e-10]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G836994_T01","GRMZM5G836994","sp|P48190|MATK_MAIZE Maturase K OS=Zea mays GN=matK PE=3 SV=3//0",0.968981639648,2.14664063414e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034401_T001","Zm00001d034401","sp|Q852K0|EGY1_ORYSJ Probable zinc metalloprotease EGY1, chloroplastic OS=Oryza sativa subsp. japonica GN=EGY1 PE=2 SV=3//1.03997e-11",0.990234615873,6.88042955943e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023534_T001","Zm00001d023534","sp|Q9SRE0|5FCLL_ARATH 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 OS=Arabidopsis thaliana GN=COG0212 PE=2 SV=1//3.46236e-137",0.979812840216,2.55245606873e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023534_T002","Zm00001d023534","sp|Q9SRE0|5FCLL_ARATH 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 OS=Arabidopsis thaliana GN=COG0212 PE=2 SV=1//3.46236e-137",0.992322945958,2.07328376689E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033853_T003","Zm00001d033853","sp|Q75GI4|ITPK3_ORYSJ Inositol-tetrakisphosphate 1-kinase 3 OS=Oryza sativa subsp. japonica GN=ITPK3 OsIPK1?? (OsMIK) PE=2 SV=1//1.96815e-166",0.956088042294,1.19429490208E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046405_T001","Zm00001d046405","sp|Q8H0V5|OCP3_ARATH Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 OS=Arabidopsis thaliana GN=OCP3 PE=1 SV=1//2.85473e-54",0.968517618711,2.310272047e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012168_T001","Zm00001d012168","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//7.37537e-20",0.977192702499,4.67777305779e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002054_T001","Zm00001d002054","sp|Q6NQK9|CCB4_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidopsis thaliana GN=CCB4 PE=1 SV=1//5.39479e-97",0.954623630233,1.40367979573E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d012168_T003","Zm00001d012168","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//7.37537e-20",0.97283803215,1.11248432244E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010121_T001","Zm00001d010121","sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1//8.39293e-12",0.95408885142,1.48701783642E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020971_T001","Zm00001d020971","sp|Q41822|IOJAP_MAIZE Protein Iojap, chloroplast OS=Zea mays GN=Ij PE=1 SV=1//5.34461e-126",0.975265090829,6.99541726767e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053412_T003","Zm00001d053412","sp|Q9FFX0|RBL9_ARATH RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana GN=RBL9 PE=2 SV=1//6.17463e-09",0.991053523553,4.44655867682e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d053412_T002","Zm00001d053412","sp|Q9FFX0|RBL9_ARATH RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana GN=RBL9 PE=2 SV=1//6.17463e-09",0.992557849077,1.77561521042e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034672_T001","Zm00001d034672","sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=2 SV=1//3.94064e-161",0.952354247776,1.78471163803e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010456_T002","Zm00001d010456",null,0.972632757028,1.15476295637E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018891_T001","Zm00001d018891","sp|Q69LE7|PNP1_ORYSJ Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PNP1 PE=2 SV=1//4.17554e-11",0.984710725726,6.41336317386E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032902_T001","Zm00001d032902","sp|Q9FM85|Y5564_ARATH Probable receptor-like protein kinase At5g56460 OS=Arabidopsis thaliana GN=At5g56460 PE=2 SV=1//3.85215e-173",-0.957807228475,9.80963711441e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d032790_T003","Zm00001d032790","sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2//8.12812e-08",0.95030524433,2.19527458611e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046925_T001","Zm00001d046925","sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2//4.41113e-18",0.951390103245,1.96951701525E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007929_T002","Zm00001d007929","sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 SV=1//1.9378e-15",0.957793795131,9.82503947311e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045837_T002","Zm00001d045837",null,0.970976947081,1.54469081082E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008294_T003","Zm00001d008294","sp|Q9QZE7|TSNAX_MOUSE Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1//1.05428e-13",0.96050112528,7.08544206418e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020653_T001","Zm00001d020653","sp|P93751|ZFP8_ARATH Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1//2.14993e-17",0.976735640631,5.16168792153e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038618_T001","Zm00001d038618","sp|Q94AS9|CNGC4_ARATH Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2//0",0.984864118182,6.0996061535e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049379_T013","Zm00001d049379","sp|Q9Y5Q9|TF3C3_HUMAN General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=1//2.58203e-21",0.966482972696,3.14891951181E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028240_T001","Zm00001d028240","sp|P31165|RK15_PEA 50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=2 SV=1//6.21382e-85",0.964614629196,4.11701589709e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d008559_T002","Zm00001d008559","sp|Q9M5P4|CRS2_MAIZE Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1//0",0.993079792922,1.23546506359e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002139_T001","Zm00001d002139","sp|Q9FNP9|AGCT_ARATH Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1//1.50736e-26",0.971345241175,1.45003812069e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046288_T001","Zm00001d046288",null,0.955123877139,1.32912050765E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028338_T001","Zm00001d028338",null,0.985275246697,5.31866417575e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031856_T002","Zm00001d031856","sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1//5.04396e-22",0.99102271309,4.52342163726e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d007139_T007","Zm00001d007139","sp|Q505J9|ATAD1_RAT ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=1 SV=1//2.14476e-47",-0.96350046857,4.79824703944e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050969_T001","Zm00001d050969","sp|P46280|EFTU2_SOYBN Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1//0",0.967912437097,2.53843186693e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036428_T007","Zm00001d036428","sp|Q6PDI6|FA63B_MOUSE Protein FAM63B OS=Mus musculus GN=Fam63b PE=2 SV=1//1.67134e-13",-0.958178047722,9.39197540221e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020402_T001","Zm00001d020402","sp|Q6ERW9|CAD8B_ORYSJ Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2//3.75194e-180",0.971907667994,1.31445624607e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d050341_T001","Zm00001d050341",null,0.976444197107,5.4905134661e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d018362_T001","Zm00001d018362","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//5.47496e-41",0.96212463837,5.75996648822e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019461_T001","Zm00001d019461","sp|Q95KD5|DJC18_MACFA DnaJ homolog subfamily C member 18 OS=Macaca fascicularis GN=DNAJC18 PE=2 SV=1//5.0148e-10",-0.959699784508,7.82332214105e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039349_T005","Zm00001d039349",null,0.978805177658,3.25084239527e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039349_T002","Zm00001d039349",null,0.979382159038,2.83454868466E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d047634_T001","Zm00001d047634","sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1//7.10032e-133",0.952651871914,1.73053573782E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033898_T001","Zm00001d033898","sp|Q94KL5|BLH4_ARATH BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=1 SV=2//2.68957e-117",0.989246016235,1.11249343071e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014189_T002","Zm00001d014189",null,0.953236337496,1.62794543579E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051554_T002","Zm00001d051554","sp|Q05JG2|ABAH1_ORYSJ Abscisic acid 8&apos;-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1//1.36759e-61",0.952345471827,1.7863292785E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052123_T001","Zm00001d052123","sp|Q6Z7L3|TRL31_ORYSJ Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774100 PE=3 SV=2//5.07284e-76",0.964513110231,4.17569713029e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040202_T009","Zm00001d040202","sp|Q5RBR3|CHMP5_PONAB Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1//8.18321e-31",0.967770658415,2.59438914796e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d014778_T001","Zm00001d014778",null,0.955138921594,1.32692795018e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017424_T011","Zm00001d017424","sp|Q6H6R9|FTSH7_ORYSJ ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1//3.47586e-47",0.966637334753,3.07787482612E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051669_T004","Zm00001d051669","sp|Q43088|RBCMT_PEA Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Pisum sativum GN=RBCMT PE=1 SV=1//1.13567e-12",0.981553359722,1.63093902827e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009918_T001","Zm00001d009918","sp|Q8LEA8|EID1_ARATH Phytochrome A-associated F-box protein OS=Arabidopsis thaliana GN=EID1 PE=1 SV=2//7.57473e-73",0.953272845233,1.62170123486e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040202_T004","Zm00001d040202","sp|Q5RBR3|CHMP5_PONAB Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1//8.18321e-31",0.984526573109,6.80690881438e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038562_T001","Zm00001d038562","sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1//1.25762e-156",-0.954019634402,1.49808514558E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d048098_T002","Zm00001d048098",null,0.956680515942,1.11699192784e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010204_T001","Zm00001d010204","sp|Q6P7K0|CMBL_XENTR Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1//7.78681e-19",0.989723846929,8.87055318088e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d033056_T004","Zm00001d033056","sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1//2.97e-24",-0.963582040257,4.74552307339e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049153_T003","Zm00001d049153",null,0.98620114508,3.84991838409E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d028670_T001","Zm00001d028670","sp|O80634|PNSL1_ARATH Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana GN=PNSL1 PE=1 SV=2//7.73564e-70",0.955620719016,1.25821499619e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009775_T001","Zm00001d009775","sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1//1.73695e-28",0.971594654519,1.38860435595e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040583_T001","Zm00001d040583","sp|O22145|OSGP2_ARATH Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2//1.32051e-133",0.963210669798,4.9893369658e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d025656_T001","Zm00001d025656","sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2//0",0.958318924745,9.23705693712e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d034808_T001","Zm00001d034808","sp|Q8VY91|RR6_ARATH 30S ribosomal protein S6 alpha, chloroplastic OS=Arabidopsis thaliana GN=RPS6 PE=2 SV=1//1.00198e-52",0.971906277487,1.31477851051e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d054087_T001","Zm00001d054087",null,0.967047887351,2.89510650564e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020506_T002","Zm00001d020506","sp|O00233|PSMD9_HUMAN 26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens GN=PSMD9 PE=1 SV=3//2.20838e-27",0.959985899485,7.55318240842e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d046363_T001","Zm00001d046363","sp|Q5C9L6|CNMT_THLFG (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1//9.31275e-117",0.97362042173,9.62496424783E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023237_T001","Zm00001d023237","sp|Q8GYP3|RDM4_ARATH RNA-directed DNA methylation 4 OS=Arabidopsis thaliana GN=RDM4 PE=1 SV=1//3.84258e-44",0.957579161086,1.00737497455E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039677_T002","Zm00001d039677",null,0.991938386251,2.64555266583e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039727_T003","Zm00001d039727",null,0.952436524813,1.76960224185E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021147_T006","Zm00001d021147",null,0.95581845043,1.23084634418e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001932_T002","Zm00001d001932","sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2//1.01443e-96",0.974723244681,7.78883813002e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001932_T001","Zm00001d001932","sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2//1.01443e-96",0.981792205273,1.52866448389E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d017435_T001","Zm00001d017435",null,0.981909197449,1.48047087922E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041864_T005","Zm00001d041864","sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=2 SV=1//3.10472e-07",0.989004354242,1.24273524804E-9]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013240_T002","Zm00001d013240",null,0.978500045938,3.48989210863e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015776_T001","Zm00001d015776",null,0.951454008755,1.95681710657e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d006090_T003","Zm00001d006090","sp|F4JRR5|TTL_ARATH TITAN-like protein OS=Arabidopsis thaliana GN=TTL PE=2 SV=1//1.9343e-49",0.951207422645,2.0061819499E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031738_T001","Zm00001d031738",null,0.992236062363,2.19297024984e-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049743_T001","Zm00001d049743","sp|Q5ZJC8|MTEF3_CHICK Transcription termination factor 3, mitochondrial OS=Gallus gallus GN=MTERF3 PE=2 SV=1//1.8255e-08",0.954360881925,1.44414897019e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010822_T001","Zm00001d010822","sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1//1.5094e-22",0.971025238628,1.5320071034e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d000123_T003","Zm00001d000123","sp|Q9FVR6|Y1222_ARATH Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=2 SV=1//5.88808e-15",0.963202481621,4.99482267102e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036828_T001","Zm00001d036828",null,0.980446114335,2.17876003905e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d041780_T001","Zm00001d041780","sp|Q2QW44|ZHD3_ORYSJ Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 SV=3//5.38706e-70",0.971035829517,1.5292365374E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051746_T001","Zm00001d051746","sp|B6TVL4|CAS_MAIZE Calcium sensing receptor, chloroplastic OS=Zea mays PE=1 SV=1//0",0.967709695681,2.61874956387e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d045919_T003","Zm00001d045919","sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1//0",0.975080459118,7.25817259628E-8]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d002540_T002","Zm00001d002540","sp|A5A7I8|CDPK5_SOLTU Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1//0",-0.963216002009,4.98576720032e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051851_T005","Zm00001d051851","sp|Q0J9V5|CXXS1_ORYSJ Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 PE=2 SV=1//1.57678e-13",0.983674303238,8.88700402157e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d037043_T001","Zm00001d037043",null,0.96279347262,5.27500448211E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d031216_T005","Zm00001d031216","sp|Q795R8|YTFP_BACSU Uncharacterized protein YtfP OS=Bacillus subtilis (strain 168) GN=ytfP PE=4 SV=2//1.59657e-12",0.954803343366,1.37652218357E-6]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G899366_T01","GRMZM5G899366","sp|P16024|RPOC1_MAIZE DNA-directed RNA polymerase subunit beta&apos; OS=Zea mays GN=rpoC1 PE=3 SV=1//0",0.968502388938,2.31580599364e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023652_T001","Zm00001d023652","sp|O81884|GALDH_ARATH L-galactose dehydrogenase OS=Arabidopsis thaliana GN=LGALDH PE=1 SV=1//5.38773e-169",0.969603934827,1.94181455138E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d015204_T001","Zm00001d015204","sp|O80360|RK3_TOBAC 50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum GN=RPL3 PE=2 SV=1//1.01714e-113",0.991722634401,3.01793923185E-10]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d044525_T001","Zm00001d044525","sp|Q5JKN1|P2C05_ORYSJ Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1//0",0.957108163547,1.06370588471E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003613_T002","Zm00001d003613","sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1//8.51755e-24",0.988632106131,1.46691325753e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d019980_T002","Zm00001d019980",null,0.967000934272,2.91556032206E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d039369_T005","Zm00001d039369","sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4 OS=Arabidopsis thaliana GN=GTE4 PE=2 SV=1//2.12321e-74",0.965916285993,3.42100047179e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d049026_T011","Zm00001d049026","sp|P19672|YQXC_BACSU Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) GN=yqxC PE=3 SV=3//2.19335e-11",0.98392226748,8.23571566499e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051320_T007","Zm00001d051320","sp|Q40863|EMB8_PICGL Embryogenesis-associated protein EMB8 OS=Picea glauca GN=EMB8 PE=2 SV=1//1.63149e-12",0.971608296902,1.38530483529e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003088_T001","Zm00001d003088","sp|Q9SRY4|LPA1_ARATH Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1//1.43288e-14",0.975434817857,6.76061153726e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d016665_T001","Zm00001d016665",null,0.961967429585,5.87893892678e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004091_T003","Zm00001d004091","sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2 SV=1//3.00295e-29",0.95600779343,1.20508377144E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d013795_T002","Zm00001d013795","sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3//2.30183e-18",0.96034511148,7.22457576874e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d051014_T004","Zm00001d051014","sp|Q8GY97|CSTR2_ARATH CMP-sialic acid transporter 2 OS=Arabidopsis thaliana GN=At2g43240 PE=2 SV=1//7.72265e-22",-0.958638528931,8.89311647751e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d003313_T001","Zm00001d003313","sp|Q9STF9|PP266_ARATH Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN=At3g46870 PE=1 SV=1//1.83402e-09",0.961563643544,6.19348426767e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020409_T001","Zm00001d020409","sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1//3.41516e-08",0.964751652231,4.03885390021e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d030859_T002","Zm00001d030859","sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1//4.11824e-27",0.981081034736,1.8492426701e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020409_T003","Zm00001d020409","sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1//3.41516e-08",0.95711270762,1.06315073056E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d020538_T001","Zm00001d020538",null,0.970306448039,1.72960147538E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d023699_T001","Zm00001d023699","sp|A3C6G9|GCSH_ORYSJ Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1//2.06903e-66",0.9748360422,7.61803973237e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052184_T001","Zm00001d052184","sp|Q8LDD3|CUT1D_ARATH Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1//5.15701e-19",0.970216704165,1.7556315024e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d052321_T002","Zm00001d052321","sp|P81748|MIFH_TRITR Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2//1.6305e-17",0.961275801339,6.42576332588e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010560_T001","Zm00001d010560",null,0.956869935166,1.0931345189e-06]
["LNC_003173","XLOC_031581","lncRNA","GRMZM5G801958_T01","GRMZM5G801958","sp|P69386|PSBE_WHEAT Cytochrome b559 subunit alpha OS=Triticum aestivum GN=psbE PE=1 SV=2//4.94005e-48",0.995334095192,1.72803993337e-11]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d011887_T001","Zm00001d011887",null,0.986354580832,3.64151686583e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d009446_T001","Zm00001d009446",null,0.955076663748,1.33601999863e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035321_T001","Zm00001d035321","sp|Q08747|UAF30_YEAST Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UAF30 PE=1 SV=1//4.11356e-11",0.982985996315,1.09125932735e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d038163_T002","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.961912864348,5.92068623462e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004362_T001","Zm00001d004362",null,0.966616724284,3.08728626663e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d005951_T001","Zm00001d005951","sp|Q6K498|HOX4_ORYSJ Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1//4.20252e-81",0.958723664771,8.80323629548e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004196_T002","Zm00001d004196","sp|Q87L85|DUSA_VIBPA tRNA-dihydrouridine(20/20a) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1//1.37067e-32",0.967209062836,2.82576155364e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004196_T004","Zm00001d004196","sp|Q87L85|DUSA_VIBPA tRNA-dihydrouridine(20/20a) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1//1.37067e-32",0.962400207356,5.55604343866e-07]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d004196_T005","Zm00001d004196","sp|Q87L85|DUSA_VIBPA tRNA-dihydrouridine(20/20a) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1//1.37067e-32",0.97916019417,2.98933366949e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d021407_T001","Zm00001d021407","sp|Q6F6B5|ARC3_ARATH Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 OS=Arabidopsis thaliana GN=ARC3 PE=1 SV=2//8.91237e-138",0.953963138452,1.50716680825e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d024539_T001","Zm00001d024539","sp|Q99ME9|NOG1_MOUSE Nucleolar GTP-binding protein 1 OS=Mus musculus GN=Gtpbp4 PE=2 SV=3//2.38833e-27",0.980256213914,2.28590268936e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d010050_T002","Zm00001d010050","sp|Q9SRL4|ENAS2_ARATH Cytosolic endo-beta-N-acetylglucosaminidase 2 OS=Arabidopsis thaliana GN=ENGASE2 PE=1 SV=1//4.36782e-13",-0.973008970488,1.0782265262E-7]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d036482_T001","Zm00001d036482",null,-0.95237889806,1.78017415174E-6]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d001206_T001","Zm00001d001206",null,0.978792942502,3.26016931229e-08]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d040322_T002","Zm00001d040322","sp|Q8LB10|CLPR4_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1//8.87417e-104",0.955058718596,1.33864984209e-06]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035185_T001","Zm00001d035185","sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2//6.38651e-121",0.984671125329,6.49641895833e-09]
["LNC_003173","XLOC_031581","lncRNA","Zm00001d035185_T002","Zm00001d035185","sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2//6.38651e-121",0.967565697769,2.6770134065e-07]
["LNC_000213","XLOC_002161","lncRNA","Zm00001d002350_T001","Zm00001d002350","sp|Q84ZW8|ACSS_MAIZE Acyclic sesquiterpene synthase OS=Zea mays GN=TPS1 PE=1 SV=1//0",0.971825295377,1.33365581245e-07]
["LNC_000213","XLOC_002161","lncRNA","Zm00001d025545_T001","Zm00001d025545","sp|Q0JCU7|ZEP_ORYSJ Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1//0",0.978447903866,3.5321071401e-08]
["LNC_000212","XLOC_002160","lncRNA","Zm00001d021834_T001","Zm00001d021834","sp|Q8GZ79|TI201_ARATH Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1//2.19548e-49",0.957844487458,9.76701715727e-07]
["LNC_001342","XLOC_013232","lncRNA","Zm00001d043651_T002","Zm00001d043651","sp|P31756|ALLN_ALLCG Alliin lyase (Fragment) OS=Allium cepa var. aggregatum PE=2 SV=1//1.71725e-110",0.98326928212,1.00386337021E-8]
["LNC_001342","XLOC_013232","lncRNA","Zm00001d013527_T001","Zm00001d013527","sp|Q9SSF8|CDPKU_ARATH Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1//0",0.967526434406,2.69307754319e-07]
["LNC_001342","XLOC_013232","lncRNA","Zm00001d014121_T001","Zm00001d014121","sp|Q6YV88|C71Z7_ORYSJ Ent-cassadiene C2-hydroxylase OS=Oryza sativa subsp. japonica GN=CYP71Z7 PE=1 SV=1//1.05563e-168",0.986392347378,3.59162921626e-09]
["LNC_001343","XLOC_013238","lncRNA","Zm00001d046916_T001","Zm00001d046916","sp|B6SZA7|CSPLA_MAIZE CASP-like protein 2C3 OS=Zea mays PE=2 SV=1//7.54492e-59",0.968955892446,2.15547107274E-7]
["LNC_001183","XLOC_011797","lncRNA","Zm00001d016100_T001","Zm00001d016100","sp|Q9M158|STR4_ARATH Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=STR4 PE=1 SV=2//1.67521e-81",0.959588050515,7.93087751916e-07]
["LNC_001186","XLOC_011823","lncRNA","Zm00001d030623_T010","Zm00001d030623","sp|Q2QNK7|S40A2_ORYSJ Solute carrier family 40 member 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0562100 PE=2 SV=1//8.02664e-06",0.970973708282,1.5455444613e-07]
["LNC_005863","XLOC_058474","lncRNA","Zm00001d009017_T002","Zm00001d009017","sp|Q5NB82|NLP3_ORYSJ Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1//3.49294e-150",0.959890281209,7.64262382269e-07]
["LNC_005863","XLOC_058474","lncRNA","Zm00001d028056_T001","Zm00001d028056","sp|Q66GP0|Y5738_ARATH BTB/POZ domain-containing protein At5g67385 OS=Arabidopsis thaliana GN=At5g67385 PE=1 SV=2//0",0.96421008077,4.35482333971E-7]
["LNC_000108","XLOC_001418","lncRNA","Zm00001d029141_T003","Zm00001d029141","sp|O14099|YERG_SCHPO Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2F3.16 PE=3 SV=1//5.54414e-10",0.952149917032,1.82267803117e-06]
["LNC_005368","XLOC_054133","lncRNA","Zm00001d020853_T004","Zm00001d020853","sp|Q9C578|RCL1_ARATH Probable RNA 3&apos;-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana GN=At5g22100 PE=2 SV=1//4.82555e-144",0.961775457852,6.0268588653e-07]
["LNC_005368","XLOC_054133","lncRNA","Zm00001d037337_T001","Zm00001d037337","sp|P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1//0",0.962211142689,5.69532276895e-07]
["LNC_005368","XLOC_054133","lncRNA","Zm00001d023534_T002","Zm00001d023534","sp|Q9SRE0|5FCLL_ARATH 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 OS=Arabidopsis thaliana GN=COG0212 PE=2 SV=1//3.46236e-137",0.955898624064,1.21988485713e-06]
["LNC_004117","XLOC_041569","lncRNA","Zm00001d018454_T006","Zm00001d018454","sp|P48642|GSHRC_ORYSJ Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica GN=GRC2 PE=2 SV=2//1.52524e-154",0.961072817663,6.59368581069e-07]
["LNC_005420","XLOC_054532","lncRNA","Zm00001d029074_T001","Zm00001d029074","sp|O81220|DCUP_MAIZE Uroporphyrinogen decarboxylase, chloroplastic OS=Zea mays GN=LES22 PE=2 SV=1//3.05889e-19",0.956690803598,1.11568567229E-6]
["LNC_005420","XLOC_054532","lncRNA","Zm00001d037449_T002","Zm00001d037449","sp|Q8W566|Y3514_ARATH Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana GN=At3g15140 PE=2 SV=1//4.1838e-110",0.964914253139,3.9476372482e-07]
["LNC_005420","XLOC_054532","lncRNA","Zm00001d042144_T001","Zm00001d042144",null,0.960934400195,6.71018028253e-07]
["LNC_001981","XLOC_019469","lncRNA","Zm00001d023506_T004","Zm00001d023506","sp|Q3HRP1|CNBL6_ORYSJ Calcineurin B-like protein 6 OS=Oryza sativa subsp. japonica GN=CBL6 PE=2 SV=1//3.47649e-12",-0.969262399875,2.05220423308e-07]
["LNC_001984","XLOC_019498","lncRNA","Zm00001d003975_T001","Zm00001d003975",null,0.957411772825,1.02711614125E-6]
["LNC_001984","XLOC_019498","lncRNA","Zm00001d031945_T006","Zm00001d031945",null,0.972039055857,1.28428809809e-07]
["LNC_001984","XLOC_019498","lncRNA","Zm00001d038163_T005","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.958247527118,9.31531513704e-07]
["LNC_001984","XLOC_019498","lncRNA","Zm00001d038894_T001","Zm00001d038894","sp|Q9S713|STT7_ARATH Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana GN=STN7 PE=1 SV=1//0",0.979433519548,2.7996603702e-08]
["LNC_001295","XLOC_012858","lncRNA","Zm00001d048590_T001","Zm00001d048590","sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2//5.14032e-19",0.969316048485,2.03454137981e-07]
["LNC_005864","XLOC_058502","lncRNA","Zm00001d052050_T009","Zm00001d052050","sp|Q8L831|NUDT3_ARATH Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3 PE=1 SV=1//5.24218e-122",0.950848187509,2.07986072809e-06]
["LNC_001292","XLOC_012835","lncRNA","Zm00001d030348_T002","Zm00001d030348","sp|A1L4Y2|ADHL3_ARATH Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1//2.88322e-143",0.964134371429,4.4005162203e-07]
["LNC_001965","XLOC_019315","lncRNA","Zm00001d052149_T019","Zm00001d052149","sp|Q12311|NTO1_YEAST NuA3 HAT complex component NTO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NTO1 PE=1 SV=1//1.46238e-16",0.984849003615,6.12996675642e-09]
["LNC_004066","XLOC_041207","lncRNA","Zm00001d011853_T001","Zm00001d011853","sp|Q942A8|GL13_ORYSJ Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1//4.79007e-104",0.960673421307,6.93427039344e-07]
["LNC_004062","XLOC_041192","lncRNA","Zm00001d028572_T010","Zm00001d028572","sp|Q84JH5|GMPP1_ORYSJ Probable mannose-1-phosphate guanylyltransferase 1 OS=Oryza sativa subsp. japonica GN=Os03g0268400 PE=2 SV=1//0",0.96962263544,1.93590961484e-07]
["LNC_004063","XLOC_041193","lncRNA","Zm00001d024004_T001","Zm00001d024004",null,-0.958381481989,9.16891858609e-07]
["LNC_004063","XLOC_041193","lncRNA","Zm00001d040650_T001","Zm00001d040650","sp|O04886|PME1_CITSI Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1//1.23879e-173",0.957515756327,1.01481692649e-06]
["LNC_003726","XLOC_037792","lncRNA","Zm00001d017880_T005","Zm00001d017880","sp|Q9FF99|AAP7_ARATH Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1//7.4681e-22",0.971172314348,1.49388775794E-7]
["LNC_003726","XLOC_037792","lncRNA","Zm00001d034085_T001","Zm00001d034085",null,0.980434579153,2.18515174844e-08]
["LNC_003726","XLOC_037792","lncRNA","Zm00001d045006_T001","Zm00001d045006",null,0.952087940849,1.83431945966e-06]
["LNC_003724","XLOC_037769","lncRNA","Zm00001d013415_T001","Zm00001d013415","sp|P43298|TMK1_ARATH Receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1//0",0.95158477844,1.93103177049e-06]
["LNC_003725","XLOC_037778","lncRNA","Zm00001d020340_T001","Zm00001d020340","sp|P93147|C81E1_GLYEC Isoflavone 2&apos;-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2//1.30557e-121",0.950163412515,2.22624468238e-06]
["LNC_005339","XLOC_053745","lncRNA","Zm00001d019497_T024","Zm00001d019497","sp|Q9F234|AGL2_BACTQ Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1//1.07665e-105",0.984561500352,6.73082478642e-09]
["LNC_004091","XLOC_041425","lncRNA","Zm00001d016441_T003","Zm00001d016441","sp|Q9ST02|NAATA_HORVU Nicotianamine aminotransferase A OS=Hordeum vulgare GN=naat-A PE=1 SV=2//9.61991e-11",0.960860019884,6.77345199929e-07]
["LNC_000456","XLOC_005046","lncRNA","Zm00001d027573_T001","Zm00001d027573",null,0.951419759418,1.96361535565E-6]
["LNC_003267","XLOC_032421","lncRNA","Zm00001d026177_T001","Zm00001d026177","sp|Q84RL6|TIP23_MAIZE Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2//4.03238e-157",0.96193170564,5.90624441354E-7]
["LNC_003267","XLOC_032421","lncRNA","Zm00001d007789_T001","Zm00001d007789","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//4.25374e-175",0.970409980829,1.69995457711e-07]
["LNC_003264","XLOC_032382","lncRNA","Zm00001d040686_T001","Zm00001d040686","sp|Q9SYI0|SECA1_ARATH Protein translocase subunit SECA1, chloroplastic OS=Arabidopsis thaliana GN=SECA1 PE=2 SV=2//5.51867e-124",0.969068525432,2.11705393216e-07]
["LNC_003462","XLOC_034835","lncRNA","GRMZM5G813608_T01","GRMZM5G813608","sp|Q33301|YCF70_MAIZE Uncharacterized protein ycf70 OS=Zea mays GN=ycf70 PE=3 SV=1//2.36095e-08",0.954068018413,1.49034203734e-06]
["LNC_003462","XLOC_034835","lncRNA","Zm00001d031494_T002","Zm00001d031494","sp|Q8GY91|APX6_ARATH Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1//2.38038e-15",0.977208169352,4.66205454241e-08]
["LNC_003462","XLOC_034835","lncRNA","Zm00001d044599_T004","Zm00001d044599","sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2//0",0.976027186611,5.98982081712e-08]
["LNC_005603","XLOC_055943","lncRNA","Zm00001d048424_T009","Zm00001d048424","sp|Q91YT7|YTHD2_MOUSE YTH domain-containing family protein 2 OS=Mus musculus GN=Ythdf2 PE=2 SV=1//1.75157e-58",0.953795637174,1.53434951211E-6]
["LNC_002930","XLOC_028917","lncRNA","Zm00001d041365_T001","Zm00001d041365","sp|B8A8D2|BBD1_ORYSI Bifunctional nuclease 1 OS=Oryza sativa subsp. indica GN=BBD1 PE=3 SV=1//1.25726e-32",0.960330100248,7.23807646263e-07]
["LNC_002930","XLOC_028917","lncRNA","Zm00001d033988_T001","Zm00001d033988","sp|Q8H0F2|ANGT_GENTR Anthocyanin 3&apos;-O-beta-glucosyltransferase OS=Gentiana triflora PE=1 SV=1//1.04804e-39",0.974674416109,7.86371390227e-08]
["LNC_001228","XLOC_012153","lncRNA","Zm00001d048366_T001","Zm00001d048366",null,0.955697592495,1.2475178921e-06]
["LNC_002933","XLOC_028975","lncRNA","Zm00001d042779_T001","Zm00001d042779","sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1//5.49583e-32",0.969894267699,1.85173779421E-7]
["LNC_000639","XLOC_006821","lncRNA","Zm00001d012510_T001","Zm00001d012510","sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1//3.10905e-29",-0.950009394685,2.26026703811e-06]
["LNC_000639","XLOC_006821","lncRNA","Zm00001d013240_T002","Zm00001d013240",null,-0.952642649079,1.73219471607e-06]
["LNC_002185","XLOC_021845","lncRNA","Zm00001d025128_T002","Zm00001d025128",null,0.973786249461,9.32882482374e-08]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d015268_T001","Zm00001d015268","sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1//4.70113e-14",0.952290658384,1.79645919141e-06]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d023267_T001","Zm00001d023267","sp|P0C8S1|RP8L2_ARATH Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=3 SV=1//3.10666e-38",0.993796531185,7.16025017056e-11]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d038485_T001","Zm00001d038485","sp|Q9LZV4|STN8_ARATH Serine/threonine-protein kinase STN8, chloroplastic OS=Arabidopsis thaliana GN=STN8 PE=2 SV=1//0",0.961548552689,6.2054938299e-07]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d002272_T009","Zm00001d002272","sp|Q8R3Q2|PP6R2_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus musculus GN=Ppp6r2 PE=1 SV=1//6.5267e-15",0.959428556035,8.08643889183e-07]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d026199_T001","Zm00001d026199","sp|Q9SZL5|PP356_ARATH Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana GN=At4g38150 PE=2 SV=1//1.89169e-34",0.951802762714,1.8886490194e-06]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d035090_T001","Zm00001d035090","sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1//3.07002e-14",-0.96215038555,5.74066527089e-07]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d025130_T001","Zm00001d025130","sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2 SV=1//5.84836e-29",0.960145490244,7.40575485825e-07]
["LNC_006035","XLOC_060098","lncRNA","Zm00001d019220_T001","Zm00001d019220","sp|Q4CTY5|SLX12_TRYCC Structure-specific endonuclease subunit SLX1 homolog 2 OS=Trypanosoma cruzi (strain CL Brener) GN=Tc00.1047053511881.30 PE=3 SV=1//1.32224e-31",0.985801530954,4.43765024727e-09]
["LNC_003593","XLOC_036088","lncRNA","Zm00001d044936_T001","Zm00001d044936","sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum GN=FT1 PE=2 SV=1//7.70837e-156",0.962013090135,5.8441845896e-07]
["LNC_004641","XLOC_046555","lncRNA","Zm00001d035337_T003","Zm00001d035337","sp|Q9FLP9|GGAP2_ARATH GDP-L-galactose phosphorylase 2 OS=Arabidopsis thaliana GN=VTC5 PE=1 SV=1//9.81638e-07",0.959778126946,7.74860306585e-07]
["LNC_005078","XLOC_051011","lncRNA","Zm00001d045261_T010","Zm00001d045261","sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2//3.26479e-86",0.955275701915,1.30712518387E-6]
["LNC_006030","XLOC_060074","lncRNA","Zm00001d019479_T003","Zm00001d019479","sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1//4.5694e-50",0.956848124129,1.09586082608e-06]
["LNC_001504","XLOC_014825","lncRNA","Zm00001d045897_T001","Zm00001d045897","sp|Q5NYD9|Y3800_AROAE UPF0061 protein AZOSEA38000 OS=Aromatoleum aromaticum (strain EbN1) GN=AZOSEA38000 PE=3 SV=1//2.7468e-167",0.976331827183,5.62166535545e-08]
["LNC_002238","XLOC_022143","lncRNA","Zm00001d012332_T001","Zm00001d012332",null,0.964993823723,3.90360045177e-07]
["LNC_001509","XLOC_014837","lncRNA","Zm00001d002680_T005","Zm00001d002680",null,0.960856515046,6.7764450451e-07]
["LNC_003047","XLOC_030328","lncRNA","Zm00001d008903_T001","Zm00001d008903","sp|P81898|PNAA_PRUDU Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis PE=1 SV=2//0",0.967118951346,2.86436669938E-7]
["LNC_003047","XLOC_030328","lncRNA","Zm00001d011785_T001","Zm00001d011785","sp|Q94DH3|PCL1_ORYSJ Transcription factor PCL1 OS=Oryza sativa subsp. japonica GN=PCL1 PE=2 SV=1//9.05309e-78",0.950030696269,2.25553713484e-06]
["LNC_003047","XLOC_030328","lncRNA","Zm00001d047106_T001","Zm00001d047106",null,0.964427821866,4.22550886059e-07]
["LNC_003046","XLOC_030328","lncRNA","Zm00001d040275_T001","Zm00001d040275",null,0.962189616052,5.71135522431e-07]
["LNC_003046","XLOC_030328","lncRNA","Zm00001d043019_T003","Zm00001d043019","sp|Q941X2|LAC3_ORYSJ Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1//5.3895e-26",0.955626125837,1.2574602537E-6]
["LNC_003046","XLOC_030328","lncRNA","Zm00001d047984_T002","Zm00001d047984","sp|P24102|PER22_ARATH Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2//5.43205e-90",0.962841008681,5.24181426709e-07]
["LNC_003280","XLOC_032586","lncRNA","Zm00001d016720_T003","Zm00001d016720","sp|Q6ESZ9|SDC1_ORYSJ Serine decarboxylase 1 OS=Oryza sativa subsp. japonica GN=SDC1 PE=3 SV=1//1.88985e-21",0.95073975688,2.10251616251E-6]
["LNC_003285","XLOC_032665","lncRNA","Zm00001d003112_T011","Zm00001d003112","sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1//1.87056e-07",0.994330363707,4.57003324073e-11]
["LNC_003285","XLOC_032665","lncRNA","Zm00001d024159_T005","Zm00001d024159","sp|Q6ZKV8|BIODA_ORYSJ Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial OS=Oryza sativa subsp. japonica GN=BIO3-BIO1 PE=2 SV=1//1.4977e-19",0.981871107336,1.49602663591E-8]
["LNC_003284","XLOC_032662","lncRNA","Zm00001d005402_T001","Zm00001d005402","sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2//1.29248e-08",0.966520067756,3.13172877631E-7]
["LNC_002511","XLOC_025018","lncRNA","Zm00001d002119_T012","Zm00001d002119","sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1//3.22239e-09",0.972961847007,1.08758548834E-7]
["LNC_005995","XLOC_059820","lncRNA","Zm00001d015560_T001","Zm00001d015560",null,0.950696359449,2.11163824559e-06]
["LNC_001616","XLOC_015636","lncRNA","Zm00001d020419_T005","Zm00001d020419","sp|Q40742|RAD23_ORYSJ Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2//3.62984e-24",0.981690666673,1.57149888658e-08]
["LNC_002529","XLOC_025182","lncRNA","Zm00001d027401_T001","Zm00001d027401","sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1//3.33328e-132",0.952063944583,1.83884265592e-06]
["LNC_002420","XLOC_024025","lncRNA","Zm00001d034590_T018","Zm00001d034590","sp|Q8RXF8|MIRO1_ARATH Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana GN=MIRO1 PE=1 SV=1//2.17421e-06",0.959022120678,8.49382992829e-07]
["LNC_001769","XLOC_017642","lncRNA","Zm00001d040218_T034","Zm00001d040218","sp|Q13117|DAZ2_HUMAN Deleted in azoospermia protein 2 OS=Homo sapiens GN=DAZ2 PE=1 SV=3//4.93229e-08",0.960235469567,7.3236469067e-07]
["LNC_001769","XLOC_017642","lncRNA","Zm00001d029506_T001","Zm00001d029506","sp|Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1//4.03124e-61",0.967912324773,2.53847581622e-07]
["LNC_003902","XLOC_039634","lncRNA","Zm00001d033985_T001","Zm00001d033985",null,0.955041985099,1.34110581906E-6]
["LNC_003902","XLOC_039634","lncRNA","Zm00001d022381_T018","Zm00001d022381","sp|Q70G58|NTRC_ORYSJ Thioredoxin reductase NTRC OS=Oryza sativa subsp. japonica GN=Os07g0657900 PE=1 SV=2//6.94318e-93",0.953381638484,1.60320609854e-06]
["LNC_003902","XLOC_039634","lncRNA","Zm00001d048366_T001","Zm00001d048366",null,-0.959686609929,7.83594341183E-7]
["LNC_003902","XLOC_039634","lncRNA","Zm00001d037008_T001","Zm00001d037008","sp|Q8GTB6|THCAS_CANSA Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1//2.08931e-105",-0.957528883398,1.01327260246e-06]
["LNC_003902","XLOC_039634","lncRNA","Zm00001d048695_T001","Zm00001d048695","sp|Q8RWU5|FBL3_ARATH F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2 SV=1//1.00038e-86",-0.961192659609,6.4941280518e-07]
["LNC_003902","XLOC_039634","lncRNA","Zm00001d027505_T001","Zm00001d027505","sp|Q75HY5|RSLE3_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica GN=Os05g0583200 PE=2 SV=1//7.02793e-18",0.992677410569,1.63782098994E-10]
["LNC_003902","XLOC_039634","lncRNA","Zm00001d036759_T004","Zm00001d036759",null,0.951894494353,1.87103576321E-6]
["LNC_001765","XLOC_017596","lncRNA","Zm00001d011610_T023","Zm00001d011610","sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0681900 PE=2 SV=1//9.33143e-136",0.95561036829,1.25966086517e-06]
["LNC_001763","XLOC_017581","lncRNA","Zm00001d040541_T001","Zm00001d040541","sp|A2ZRY8|IAA4_ORYSJ Auxin-responsive protein IAA4 OS=Oryza sativa subsp. japonica GN=IAA4 PE=2 SV=1//6.16228e-35",0.961181995113,6.50293877413e-07]
["LNC_001763","XLOC_017581","lncRNA","Zm00001d049595_T001","Zm00001d049595","sp|Q9SRQ1|C89A9_ARATH Cytochrome P450 89A9 OS=Arabidopsis thaliana GN=CYP89A9 PE=2 SV=1//1.86109e-77",0.960397053818,7.17801454053e-07]
["LNC_001763","XLOC_017581","lncRNA","Zm00001d028889_T001","Zm00001d028889",null,0.973853980702,9.20997673681e-08]
["LNC_001763","XLOC_017581","lncRNA","Zm00001d018435_T001","Zm00001d018435","sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1//5.33391e-51",0.952272393647,1.79984474724e-06]
["LNC_004802","XLOC_048059","lncRNA","Zm00001d051872_T001","Zm00001d051872","sp|Q9AR14|PIP15_MAIZE Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1//0",0.961849207508,5.96968682043e-07]
["LNC_000367","XLOC_003869","lncRNA","Zm00001d026290_T001","Zm00001d026290","sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1//4.66763e-134",0.963754831333,4.63536011575e-07]
["LNC_000367","XLOC_003869","lncRNA","Zm00001d011786_T001","Zm00001d011786","sp|P49100|CYB5_ORYSJ Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2//1.74056e-81",-0.956294432867,1.16689909184E-6]
["LNC_004809","XLOC_048088","lncRNA","Zm00001d019731_T001","Zm00001d019731","sp|Q53FA7|QORX_HUMAN Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2//7.81853e-29",0.964505147339,4.18032791272e-07]
["LNC_000568","XLOC_006221","lncRNA","Zm00001d030859_T002","Zm00001d030859","sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1//4.11824e-27",0.954631898812,1.40242101976e-06]
["LNC_002735","XLOC_027201","lncRNA","Zm00001d011932_T001","Zm00001d011932","sp|Q42602|C89A2_ARATH Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2//3.82996e-145",0.9550690347,1.33713752604e-06]
["LNC_002735","XLOC_027201","lncRNA","Zm00001d046621_T001","Zm00001d046621","sp|P47927|AP2_ARATH Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1//1.77339e-65",0.953746426884,1.54240901407E-6]
["LNC_000560","XLOC_006153","lncRNA","Zm00001d009765_T001","Zm00001d009765",null,0.964912325128,3.94870914855E-7]
["LNC_001229","XLOC_012165","lncRNA","Zm00001d032620_T001","Zm00001d032620","sp|Q9SJ52|YLS9_ARATH Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1//1.22511e-10",0.954950143704,1.35464914819E-6]
["LNC_001229","XLOC_012165","lncRNA","Zm00001d028486_T001","Zm00001d028486","sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1//9.89063e-26",0.973500112506,9.84446382191e-08]
["LNC_001229","XLOC_012165","lncRNA","Zm00001d018487_T006","Zm00001d018487","sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2//1.30785e-54",0.978475570362,3.50965754237e-08]
["LNC_005424","XLOC_054575","lncRNA","Zm00001d024037_T003","Zm00001d024037","sp|Q41761|HGGL2_MAIZE 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 2, chloroplastic OS=Zea mays GN=GLU2 PE=1 SV=1//0",0.971813219943,1.33648903944e-07]
["LNC_005424","XLOC_054575","lncRNA","Zm00001d023530_T011","Zm00001d023530",null,0.978545115609,3.45372797028e-08]
["LNC_000260","XLOC_002619","lncRNA","Zm00001d030053_T005","Zm00001d030053","sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana GN=AHL10 PE=1 SV=2//2.24088e-64",0.98329430032,9.96421989363e-09]
["LNC_000260","XLOC_002619","lncRNA","Zm00001d043835_T009","Zm00001d043835","sp|Q42572|DNLI1_ARATH DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 PE=2 SV=2//4.88028e-54",0.969473548948,1.98338497182E-7]
["LNC_003914","XLOC_039764","lncRNA","Zm00001d008610_T001","Zm00001d008610","sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1//2.08182e-28",0.978069475111,3.85083773757e-08]
["LNC_003914","XLOC_039764","lncRNA","Zm00001d039066_T002","Zm00001d039066","sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1//1.30683e-06",0.969893437354,1.85199057867e-07]
["LNC_003914","XLOC_039764","lncRNA","Zm00001d010336_T002","Zm00001d010336","sp|Q6AUK5|MSRB3_ORYSJ Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB3 PE=2 SV=1//2.80098e-53",0.981900217472,1.48412655498e-08]
["LNC_003914","XLOC_039764","lncRNA","Zm00001d045573_T003","Zm00001d045573","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//2.70176e-28",0.980729529853,2.02633976265E-8]
["LNC_003914","XLOC_039764","lncRNA","Zm00001d018571_T003","Zm00001d018571",null,0.956561244927,1.13222497222E-6]
["LNC_003914","XLOC_039764","lncRNA","Zm00001d053545_T003","Zm00001d053545","sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.15 PE=3 SV=2//3.22165e-09",0.977203062528,4.66723979464e-08]
["LNC_004242","XLOC_042683","lncRNA","Zm00001d051180_T003","Zm00001d051180",null,0.965995054963,3.38210214945e-07]
["LNC_004246","XLOC_042754","lncRNA","Zm00001d013908_T014","Zm00001d013908",null,0.972000490115,1.29308546537e-07]
["LNC_004247","XLOC_042774","lncRNA","Zm00001d039987_T001","Zm00001d039987","sp|P08452|Y1174_SYNP6 Uncharacterized lipoprotein syc1174_c OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1174_c PE=3 SV=2//7.10527e-15",0.953096310762,1.65207243219e-06]
["LNC_004247","XLOC_042774","lncRNA","Zm00001d025545_T001","Zm00001d025545","sp|Q0JCU7|ZEP_ORYSJ Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1//0",0.956987518802,1.07852957631e-06]
["LNC_002885","XLOC_028691","lncRNA","Zm00001d024423_T008","Zm00001d024423","sp|Q6Z4T5|POLIA_ORYSJ DNA polymerase I A, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0175300 PE=2 SV=1//2.45121e-75",0.973432569176,9.96942981502E-8]
["LNC_002885","XLOC_028691","lncRNA","Zm00001d028672_T001","Zm00001d028672","sp|Q056X9|RS18_BUCCC 30S ribosomal protein S18 OS=Buchnera aphidicola subsp. Cinara cedri (strain Cc) GN=rpsR PE=3 SV=1//1.42771e-08",0.960312748736,7.25370691068e-07]
["LNC_002886","XLOC_028693","lncRNA","Zm00001d033625_T058","Zm00001d033625","sp|Q9S814|EIN2_ARATH Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1//6.42241e-07",0.975277829696,6.97757158719e-08]
["LNC_002886","XLOC_028693","lncRNA","Zm00001d021785_T026","Zm00001d021785","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//1.13611e-80",0.950645423684,2.12238488606e-06]
["LNC_001199","XLOC_011910","lncRNA","Zm00001d053911_T001","Zm00001d053911",null,0.980349713567,2.23263727506E-8]
["LNC_001193","XLOC_011887","lncRNA","Zm00001d034640_T033","Zm00001d034640","sp|P42744|ULA1_ARATH NEDD8-activating enzyme E1 regulatory subunit OS=Arabidopsis thaliana GN=AXR1 PE=1 SV=1//4.74951e-36",0.965811942128,3.47307533399e-07]
["LNC_001192","XLOC_011876","lncRNA","Zm00001d033652_T002","Zm00001d033652","sp|C0LGT1|Y5129_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1//0",0.978775792262,3.27327889238e-08]
["LNC_001190","XLOC_011859","lncRNA","Zm00001d046593_T001","Zm00001d046593","sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1//0",0.983928198073,8.22061907435E-9]
["LNC_004921","XLOC_049406","lncRNA","Zm00001d036623_T001","Zm00001d036623",null,0.955536430098,1.27002752381e-06]
["LNC_004921","XLOC_049406","lncRNA","Zm00001d031734_T001","Zm00001d031734","sp|Q9MAA1|GDL49_ARATH GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1//1.00593e-39",0.955593487698,1.26202170514e-06]
["LNC_003993","XLOC_040594","lncRNA","Zm00001d003817_T003","Zm00001d003817","sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1//2.95855e-28",-0.957654885801,9.98543857754e-07]
["LNC_003993","XLOC_040594","lncRNA","Zm00001d002814_T006","Zm00001d002814",null,-0.95211169554,1.82985049668E-6]
["LNC_003993","XLOC_040594","lncRNA","Zm00001d048366_T001","Zm00001d048366",null,0.965484559836,3.64056700342e-07]
["LNC_003993","XLOC_040594","lncRNA","Zm00001d011448_T001","Zm00001d011448","sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1//3.68077e-12",-0.96956708986,1.9534907227e-07]
["LNC_003993","XLOC_040594","lncRNA","Zm00001d009723_T001","Zm00001d009723","sp|Q84JF5|PTA14_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana GN=PTAC14 PE=1 SV=1//1.82206e-11",-0.970463966739,1.68465683164e-07]
["LNC_003993","XLOC_040594","lncRNA","Zm00001d018001_T001","Zm00001d018001","sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2//1.12959e-09",0.951305155722,1.98649970695e-06]
["LNC_004922","XLOC_049409","lncRNA","Zm00001d018544_T002","Zm00001d018544",null,0.963809981584,4.6006304677E-7]
["LNC_004922","XLOC_049409","lncRNA","Zm00001d045573_T003","Zm00001d045573","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//2.70176e-28",0.975482899556,6.69524853336e-08]
["LNC_004922","XLOC_049409","lncRNA","Zm00001d019057_T001","Zm00001d019057","sp|Q67YC9|Y4141_ARATH Uncharacterized protein At4g14100 OS=Arabidopsis thaliana GN=At4g14100 PE=2 SV=1//2.53884e-32",0.975038714996,7.31865541503e-08]
["LNC_000505","XLOC_005626","lncRNA","Zm00001d016022_T001","Zm00001d016022","sp|Q4PR42|EXP24_ORYSJ Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2//4.65111e-134",0.963889937763,4.55064750771e-07]
["LNC_000372","XLOC_003919","lncRNA","Zm00001d051754_T009","Zm00001d051754","sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=2 SV=1//0",0.956719131283,1.11209508535e-06]
["LNC_000372","XLOC_003919","lncRNA","Zm00001d053585_T001","Zm00001d053585","sp|Q6Z6K4|BGAL4_ORYSJ Beta-galactosidase 4 OS=Oryza sativa subsp. japonica GN=Os02g0219200 PE=2 SV=1//0",0.973505987129,9.83365406881e-08]
["LNC_004103","XLOC_041486","lncRNA","Zm00001d036630_T001","Zm00001d036630","sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1//1.45759e-91",0.966835493294,2.98854805347e-07]
["LNC_004102","XLOC_041485","lncRNA","Zm00001d001533_T001","Zm00001d001533",null,0.953079918748,1.65491526816E-6]
["LNC_004102","XLOC_041485","lncRNA","Zm00001d018146_T012","Zm00001d018146","sp|Q9FV50|MAP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1//1.4155e-10",0.953095985623,1.65212878267e-06]
["LNC_000179","XLOC_001964","lncRNA","Zm00001d038027_T002","Zm00001d038027",null,0.965607676038,3.57684285524e-07]
["LNC_000179","XLOC_001964","lncRNA","Zm00001d014458_T001","Zm00001d014458","sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2//0",0.959521022643,7.9959601762e-07]
["LNC_000179","XLOC_001964","lncRNA","Zm00001d005972_T010","Zm00001d005972","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//6.10531e-43",0.969039912852,2.12676113831e-07]
["LNC_005456","XLOC_054774","lncRNA","Zm00001d002511_T006","Zm00001d002511","sp|P61819|CBIX_METMP Sirohydrochlorin cobaltochelatase OS=Methanococcus maripaludis (strain S2 / LL) GN=cbiX PE=3 SV=1//3.81267e-14",0.973657509001,9.55809191794e-08]
["LNC_005456","XLOC_054774","lncRNA","Zm00001d021498_T006","Zm00001d021498","sp|Q8VYC8|RIN2_ARATH E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana GN=RIN2 PE=1 SV=1//3.43836e-06",0.972146051786,1.26013012691E-7]
["LNC_005457","XLOC_054790","lncRNA","Zm00001d021318_T007","Zm00001d021318","sp|F4JNY0|APE2_ARATH DNA-(apurinic or apyrimidinic site) lyase 2 OS=Arabidopsis thaliana GN=APE2 PE=1 SV=1//1.37498e-157",0.95121080401,2.00549841178E-6]
["LNC_000173","XLOC_001899","lncRNA","Zm00001d014962_T003","Zm00001d014962",null,0.951532387003,1.94132981735e-06]
["LNC_003604","XLOC_036159","lncRNA","Zm00001d044898_T001","Zm00001d044898","sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1//4.90162e-08",0.954065844845,1.4906892003E-6]
["LNC_003606","XLOC_036171","lncRNA","Zm00001d004386_T001","Zm00001d004386",null,0.989196189711,1.13841114313e-09]
["LNC_003606","XLOC_036171","lncRNA","Zm00001d015798_T001","Zm00001d015798","sp|Q9ZSP5|AIR3_ARATH Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana GN=AIR3 PE=2 SV=1//0",0.950099304579,2.24035634977e-06]
["LNC_003606","XLOC_036171","lncRNA","Zm00001d028661_T001","Zm00001d028661","sp|Q9FZ84|RBG6_ARATH Glycine-rich RNA-binding protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBG6 PE=2 SV=1//4.27283e-14",0.976707104266,5.19317344683e-08]
["LNC_001280","XLOC_012686","lncRNA","Zm00001d044132_T002","Zm00001d044132","sp|Q42456|ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2//0",0.965738149673,3.51028195844e-07]
["LNC_001280","XLOC_012686","lncRNA","Zm00001d010901_T003","Zm00001d010901","sp|B5DGI7|RBM8A_SALSA RNA-binding protein 8A OS=Salmo salar GN=rbm8a PE=2 SV=1//1.89339e-36",0.955112171227,1.33082849896e-06]
["LNC_002955","XLOC_029131","lncRNA","Zm00001d029898_T001","Zm00001d029898","sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2 SV=1//5.67213e-27",0.951172047177,2.01334413541e-06]
["LNC_002955","XLOC_029131","lncRNA","Zm00001d020461_T001","Zm00001d020461","sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2 OS=Arabidopsis thaliana GN=At1g26850 PE=2 SV=2//0",-0.960980368975,6.67131229348e-07]
["LNC_004243","XLOC_042706","lncRNA","Zm00001d043278_T005","Zm00001d043278","sp|Q9LX14|UFC_ARATH Protein UPSTREAM OF FLC OS=Arabidopsis thaliana GN=UFC PE=2 SV=1//2.46641e-13",0.952136818815,1.82513346458E-6]
["LNC_001976","XLOC_019414","lncRNA","Zm00001d014317_T001","Zm00001d014317",null,0.975765094133,6.32170211734e-08]
["LNC_001868","XLOC_018473","lncRNA","Zm00001d005779_T173","Zm00001d005779","sp|P21616|AVP_VIGRR Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna radiata var. radiata PE=1 SV=4//3.00044e-38",0.992019320361,2.51573428756e-10]
["LNC_001868","XLOC_018473","lncRNA","Zm00001d048689_T057","Zm00001d048689","sp|Q7ZZ25|ATD1A_DANRE ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2//6.36354e-70",0.961461484822,6.27514584739e-07]
["LNC_001868","XLOC_018473","lncRNA","Zm00001d036334_T004","Zm00001d036334","sp|P24555|PTRB_ECOLI Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2//7.81162e-08",0.990995731661,4.59159821276e-10]
["LNC_001560","XLOC_015094","lncRNA","Zm00001d030340_T015","Zm00001d030340",null,0.981234385659,1.77595818052e-08]
["LNC_000521","XLOC_005761","lncRNA","Zm00001d035654_T001","Zm00001d035654","sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1//3.33316e-73",0.962482766729,5.49607974465e-07]
["LNC_004071","XLOC_041246","lncRNA","Zm00001d051456_T001","Zm00001d051456","sp|Q6EPP9|GRF10_ORYSJ Growth-regulating factor 10 OS=Oryza sativa subsp. japonica GN=GRF10 PE=2 SV=1//2.68259e-88",0.954617580738,1.40460131504e-06]
["LNC_003738","XLOC_037992","lncRNA","Zm00001d052841_T002","Zm00001d052841","sp|Q9XGP7|OMT15_ORYSJ Tricin synthase 1 OS=Oryza sativa subsp. japonica GN=ROMT-15 PE=1 SV=1//1.27732e-59",0.964571043038,4.14212922628e-07]
["LNC_003738","XLOC_037992","lncRNA","Zm00001d007758_T022","Zm00001d007758","sp|Q6Z382|COPG2_ORYSJ Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1//6.48488e-72",0.95908883261,8.42586656447e-07]
["LNC_000007","XLOC_000054","lncRNA","Zm00001d050645_T002","Zm00001d050645","sp|Q6H6N5|NIN3_ORYSJ Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=NIN3 PE=2 SV=1//0",0.962745083556,5.30896161255e-07]
["LNC_003733","XLOC_037914","lncRNA","Zm00001d016471_T001","Zm00001d016471","sp|H2DH22|C7A10_PANGI Cytochrome P450 CYP73A100 OS=Panax ginseng PE=2 SV=1//0",0.967434999994,2.7307841699e-07]
["LNC_001030","XLOC_010425","lncRNA","Zm00001d031258_T002","Zm00001d031258","sp|Q39061|CP33_ARATH RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1//7.16133e-25",0.951828874866,1.88362193043e-06]
["LNC_003454","XLOC_034782","lncRNA","Zm00001d013122_T007","Zm00001d013122","sp|O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2//4.80743e-44",0.968864860894,2.18692391751E-7]
["LNC_003455","XLOC_034787","lncRNA","Zm00001d045574_T001","Zm00001d045574","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//6.32388e-16",0.971188133908,1.4898330214E-7]
["LNC_003455","XLOC_034787","lncRNA","Zm00001d017435_T001","Zm00001d017435",null,0.957617232173,1.00292735583e-06]
["LNC_003457","XLOC_034787","lncRNA","Zm00001d017482_T001","Zm00001d017482",null,0.954088422492,1.48708621861E-6]
["LNC_003457","XLOC_034787","lncRNA","Zm00001d001881_T001","Zm00001d001881","sp|Q9M8R4|DJ1D_ARATH Protein DJ-1 homolog D OS=Arabidopsis thaliana GN=DJ1D PE=1 SV=1//4.4828e-18",0.976786910257,5.10550195454e-08]
["LNC_003457","XLOC_034787","lncRNA","Zm00001d038170_T001","Zm00001d038170","sp|O22567|DXS1_ORYSJ 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2//0",0.97075100091,1.60515051251e-07]
["LNC_003457","XLOC_034787","lncRNA","Zm00001d021385_T001","Zm00001d021385","sp|Q05001|NCPR_CATRO NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1//0",0.96544277463,3.6623987465E-7]
["LNC_005673","XLOC_056890","lncRNA","Zm00001d008730_T001","Zm00001d008730",null,0.970679497842,1.62467088671e-07]
["LNC_001306","XLOC_012983","lncRNA","Zm00001d053962_T002","Zm00001d053962","sp|Q9SQK3|EM506_ARATH Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1//5.5668e-91",0.966375413387,3.19918976643e-07]
["LNC_001306","XLOC_012983","lncRNA","Zm00001d023536_T003","Zm00001d023536","sp|Q53RM0|CHLI_ORYSJ Magnesium-chelatase subunit ChlI, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLI PE=1 SV=1//0",0.961014291238,6.64274488082e-07]
["LNC_001306","XLOC_012983","lncRNA","Zm00001d035169_T001","Zm00001d035169",null,0.950231370722,2.21136253797e-06]
["LNC_001306","XLOC_012983","lncRNA","Zm00001d027309_T005","Zm00001d027309","sp|G4LTX4|DSP4_CASSA Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa GN=DSP4 PE=1 SV=1//7.00096e-38",0.973767344284,9.36221482561e-08]
["LNC_005679","XLOC_056946","lncRNA","Zm00001d017597_T002","Zm00001d017597","sp|Q6EPQ3|SPXM1_ORYSJ SPX domain-containing membrane protein Os02g45520 OS=Oryza sativa subsp. japonica GN=Os02g0678200 PE=2 SV=1//0",0.958765078346,8.75977652859e-07]
["LNC_001427","XLOC_014330","lncRNA","Zm00001d032602_T001","Zm00001d032602",null,0.964766518978,4.0304449378e-07]
["LNC_001425","XLOC_014324","lncRNA","Zm00001d031421_T001","Zm00001d031421","sp|P82658|TL19_ARATH Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At3g63540 PE=1 SV=2//1.1089e-66",0.967354448975,2.76434946045e-07]
["LNC_001420","XLOC_014306","lncRNA","Zm00001d010032_T001","Zm00001d010032","sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1//1.14037e-171",0.953281913622,1.62015314853E-6]
["LNC_001420","XLOC_014306","lncRNA","Zm00001d027936_T006","Zm00001d027936","sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1//0",0.95394023525,1.51086089462E-6]
["LNC_001420","XLOC_014306","lncRNA","Zm00001d029429_T002","Zm00001d029429","sp|P85107|TGS1_RAT Trimethylguanosine synthase OS=Rattus norvegicus GN=Tgs1 PE=1 SV=1//1.34408e-66",0.971770468298,1.3465582871e-07]
["LNC_000824","XLOC_008529","lncRNA","Zm00001d010054_T001","Zm00001d010054","sp|Q0PGJ6|AKRC9_ARATH Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1//3.03466e-29",0.955824964016,1.22995288754E-6]
["LNC_000824","XLOC_008529","lncRNA","Zm00001d000316_T001","Zm00001d000316","sp|P16243|MAOC_MAIZE NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1//0",0.958623475941,8.90908386619e-07]
["LNC_004499","XLOC_045008","lncRNA","Zm00001d004611_T001","Zm00001d004611","sp|P05332|YP20_BACLI Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1//4.94037e-14",0.958479483205,9.06297717318e-07]
["LNC_004499","XLOC_045008","lncRNA","Zm00001d052953_T002","Zm00001d052953","sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2//1.9561e-22",0.957183924044,1.05448015653E-6]
["LNC_004655","XLOC_046687","lncRNA","Zm00001d014275_T002","Zm00001d014275",null,0.967348130178,2.76699629431e-07]
["LNC_005851","XLOC_058403","lncRNA","Zm00001d038448_T001","Zm00001d038448","sp|Q9LYN0|PR1B1_ARATH PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1//3.90904e-43",0.96926284419,2.05205745063E-7]
["LNC_001513","XLOC_014855","lncRNA","Zm00001d044008_T006","Zm00001d044008",null,0.956842116243,1.09661273928E-6]
["LNC_001511","XLOC_014852","lncRNA","Zm00001d033412_T001","Zm00001d033412","sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2//1.8016e-27",0.975276094093,6.98000084398e-08]
["LNC_006234","XLOC_061895","lncRNA","Zm00001d011492_T016","Zm00001d011492",null,0.95048780901,2.15591413233e-06]
["LNC_005268","XLOC_052706","lncRNA","Zm00001d021117_T001","Zm00001d021117",null,0.954622540659,1.40384573522e-06]
["LNC_002085","XLOC_020664","lncRNA","Zm00001d029571_T001","Zm00001d029571","sp|Q17RB8|LONF1_HUMAN LON peptidase N-terminal domain and RING finger protein 1 OS=Homo sapiens GN=LONRF1 PE=1 SV=2//6.15627e-07",0.950661959244,2.118891401e-06]
["LNC_000770","XLOC_007977","lncRNA","Zm00001d053070_T002","Zm00001d053070","sp|Q9LRE6|DPOD1_ORYSJ DNA polymerase delta catalytic subunit OS=Oryza sativa subsp. japonica GN=POLD1 PE=2 SV=1//0",0.955263495393,1.30888282546E-6]
["LNC_000770","XLOC_007977","lncRNA","Zm00001d006499_T006","Zm00001d006499","sp|Q9LUR0|CNDH2_ARATH Condensin-2 complex subunit H2 OS=Arabidopsis thaliana GN=CAPH2 PE=2 SV=1//5.78682e-22",0.964266282195,4.32114866555e-07]
["LNC_000771","XLOC_007978","lncRNA","Zm00001d032637_T008","Zm00001d032637","sp|Q9LHE9|MYO1_ARATH Myosin-1 OS=Arabidopsis thaliana GN=VIII-1 PE=1 SV=1//2.10775e-07",0.962332462756,5.6056343789e-07]
["LNC_000771","XLOC_007978","lncRNA","Zm00001d025713_T002","Zm00001d025713","sp|Q7X7L3|ELP3_ORYSJ Elongator complex protein 3 OS=Oryza sativa subsp. japonica GN=ELP3 PE=2 SV=2//3.88597e-139",0.96248633622,5.49349883805e-07]
["LNC_001607","XLOC_015506","lncRNA","Zm00001d036608_T010","Zm00001d036608","sp|Q653V7|AGLU_ORYSJ Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa subsp. japonica GN=Os06g0675700 PE=1 SV=1//0",0.961206712988,6.48253201563E-7]
["LNC_001601","XLOC_015411","lncRNA","Zm00001d014325_T002","Zm00001d014325",null,0.975389016487,6.82334644342e-08]
["LNC_000019","XLOC_000211","lncRNA","Zm00001d038483_T001","Zm00001d038483","sp|Q9FHK4|Y5519_ARATH Uncharacterized protein At5g05190 OS=Arabidopsis thaliana GN=Y-1 PE=1 SV=1//1.00721e-07",0.959656616122,7.86473786984e-07]
["LNC_003815","XLOC_038753","lncRNA","Zm00001d028803_T002","Zm00001d028803","sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2 OS=Arabidopsis thaliana GN=SCAR2 PE=1 SV=1//9.11614e-14",0.977896130887,4.00428572522e-08]
["LNC_003146","XLOC_031390","lncRNA","Zm00001d011705_T002","Zm00001d011705","sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3//0",0.963352714837,4.89493286793e-07]
["LNC_003145","XLOC_031387","lncRNA","Zm00001d027460_T001","Zm00001d027460","sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus GN=Phrf1 PE=2 SV=2//3.3243e-07",0.975495331938,6.6784299424e-08]
["LNC_003145","XLOC_031387","lncRNA","Zm00001d008549_T002","Zm00001d008549","sp|Q9LQK7|AB7I_ARATH Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1//3.28093e-23",0.968001099827,2.50392935275e-07]
["LNC_003145","XLOC_031387","lncRNA","Zm00001d033056_T004","Zm00001d033056","sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1//2.97e-24",-0.965163206633,3.81115927363E-7]
["LNC_003145","XLOC_031387","lncRNA","Zm00001d047603_T004","Zm00001d047603","sp|P0AB89|PUR8_ECOLI Adenylosuccinate lyase OS=Escherichia coli (strain K12) GN=purB PE=1 SV=1//4.93593e-08",0.98104534237,1.86664057544e-08]
["LNC_003810","XLOC_038704","lncRNA","Zm00001d033353_T001","Zm00001d033353","sp|Q6J9S1|RA211_ARATH Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1//1.23571e-19",0.962533391211,5.45956585274e-07]
["LNC_003149","XLOC_031401","lncRNA","Zm00001d003572_T002","Zm00001d003572","sp|Q0WVV6|CB60D_ARATH Calmodulin-binding protein 60 D OS=Arabidopsis thaliana GN=CBP60D PE=2 SV=1//1.34821e-179",0.962125966805,5.75896937471e-07]
["LNC_005514","XLOC_055185","lncRNA","Zm00001d019191_T003","Zm00001d019191","sp|P36397|ARF1_ARATH ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2//2.47427e-126",0.962378492049,5.57190152239e-07]
["LNC_005514","XLOC_055185","lncRNA","Zm00001d017427_T002","Zm00001d017427","sp|Q6H3Z3|YSL15_ORYSJ Iron-phytosiderophore transporter YSL15 OS=Oryza sativa subsp. japonica GN=YSL15 PE=2 SV=1//0",0.965721994075,3.51846984881e-07]
["LNC_004329","XLOC_043662","lncRNA","Zm00001d048045_T001","Zm00001d048045",null,0.952245348269,1.80486717949E-6]
["LNC_005513","XLOC_055179","lncRNA","Zm00001d025687_T002","Zm00001d025687","sp|Q7XK25|PCH2_ORYSJ Pachytene checkpoint protein 2 homolog OS=Oryza sativa subsp. japonica GN=CRC1 PE=1 SV=4//1.60691e-117",-0.970715107907,1.61492584367E-7]
["LNC_005513","XLOC_055179","lncRNA","Zm00001d025848_T001","Zm00001d025848",null,0.975160566714,7.14322059281e-08]
["LNC_000485","XLOC_005363","lncRNA","Zm00001d032828_T004","Zm00001d032828","sp|Q54GU0|ARSB_DICDI Putative transporter arsB OS=Dictyostelium discoideum GN=arsB PE=2 SV=1//9.02786e-25",0.956155122441,1.18533543292e-06]
["LNC_000485","XLOC_005363","lncRNA","Zm00001d007151_T002","Zm00001d007151","sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana GN=ESD4 PE=1 SV=1//2.73012e-10",0.953623252292,1.56272948981E-6]
["LNC_005512","XLOC_055174","lncRNA","Zm00001d028930_T001","Zm00001d028930","sp|Q9LDE1|MY108_ARATH Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1//8.41133e-73",0.961966886483,5.8793532931e-07]
["LNC_005512","XLOC_055174","lncRNA","Zm00001d020267_T001","Zm00001d020267","sp|O65665|ERF60_ARATH Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1//3.98817e-30",0.950511571379,2.15083247279E-6]
["LNC_004850","XLOC_048643","lncRNA","Zm00001d035772_T003","Zm00001d035772","sp|Q9FXT6|PEX14_ARATH Peroxisomal membrane protein PEX14 OS=Arabidopsis thaliana GN=PEX14 PE=1 SV=2//4.58136e-34",0.952739520382,1.7148325977e-06]
["LNC_001777","XLOC_017738","lncRNA","Zm00001d005874_T001","Zm00001d005874","sp|Q6NLW5|XRI1_ARATH Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2//1.60362e-08",0.950064779085,2.24798555593E-6]
["LNC_001776","XLOC_017735","lncRNA","Zm00001d028987_T002","Zm00001d028987","sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=2 SV=1//0",0.958980669895,8.5362771074e-07]
["LNC_001774","XLOC_017712","lncRNA","Zm00001d051418_T001","Zm00001d051418","sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2//5.55925e-49",0.950801386456,2.08961543979e-06]
["LNC_003851","XLOC_039226","lncRNA","Zm00001d025980_T013","Zm00001d025980","sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=2 SV=1//1.18171e-59",0.95558252237,1.26355714514e-06]
["LNC_003852","XLOC_039227","lncRNA","GRMZM5G889299_T01","GRMZM5G889299","sp|P10582|DPOM_MAIZE DNA polymerase OS=Zea mays PE=3 SV=1//0",0.952363250421,1.78305341936e-06]
["LNC_003852","XLOC_039227","lncRNA","Zm00001d047875_T006","Zm00001d047875","sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2//1.51775e-09",-0.957578600085,1.00744062987E-6]
["LNC_003852","XLOC_039227","lncRNA","Zm00001d052212_T001","Zm00001d052212","sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=1//8.07211e-29",0.963876103416,4.5592647302e-07]
["LNC_003852","XLOC_039227","lncRNA","Zm00001d005843_T001","Zm00001d005843","sp|Q67U94|HFB4C_ORYSJ Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica GN=HSFB4C PE=3 SV=1//3.06835e-94",0.970208128906,1.7581349665e-07]
["LNC_003859","XLOC_039293","lncRNA","Zm00001d011075_T064","Zm00001d011075","sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2//7.10399e-28",0.959038274358,8.47733341747e-07]
["LNC_000391","XLOC_004159","lncRNA","Zm00001d036546_T007","Zm00001d036546","sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1//1.63511e-07",0.951760097748,1.89688573693E-6]
["LNC_002931","XLOC_028920","lncRNA","Zm00001d013693_T001","Zm00001d013693","sp|P50471|GSTX1_NICPL Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1//1.33739e-59",0.951449006232,1.95780890566e-06]
["LNC_004813","XLOC_048107","lncRNA","Zm00001d044940_T006","Zm00001d044940","sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1//3.23984e-29",0.969427993984,1.99807485224E-7]
["LNC_000398","XLOC_004302","lncRNA","Zm00001d036905_T005","Zm00001d036905","sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum GN=strap PE=3 SV=1//3.91107e-18",0.95268292128,1.72495992645e-06]
["LNC_000399","XLOC_004304","lncRNA","Zm00001d033308_T001","Zm00001d033308","sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1//1.59289e-71",0.985108374968,5.62537438853e-09]
["LNC_002725","XLOC_027090","lncRNA","Zm00001d028630_T004","Zm00001d028630","sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1//0",0.954017664791,1.49840102592e-06]
["LNC_005079","XLOC_051020","lncRNA","Zm00001d037203_T001","Zm00001d037203","sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730 OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1//4.93135e-33",0.954879265166,1.36517523086E-6]
["LNC_002729","XLOC_027125","lncRNA","Zm00001d053412_T003","Zm00001d053412","sp|Q9FFX0|RBL9_ARATH RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana GN=RBL9 PE=2 SV=1//6.17463e-09",0.955250643497,1.31073542242E-6]
["LNC_005806","XLOC_057944","lncRNA","Zm00001d014030_T001","Zm00001d014030","sp|Q08062|MDHC_MAIZE Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2//0",0.978242241654,3.70260115901e-08]
["LNC_000552","XLOC_006103","lncRNA","Zm00001d026285_T001","Zm00001d026285",null,-0.953718648439,1.54697328846e-06]
["LNC_000552","XLOC_006103","lncRNA","Zm00001d016156_T005","Zm00001d016156","sp|Q9LUD7|CALS8_ARATH Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=2 SV=2//0",0.950784953396,2.09304916488e-06]
["LNC_000454","XLOC_005046","lncRNA","Zm00001d038189_T011","Zm00001d038189","sp|Q05627|Y202_CLOB8 Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=Cbei_0202 PE=4 SV=2//1.25189e-34",0.967315163752,2.78083807537e-07]
["LNC_003924","XLOC_039916","lncRNA","Zm00001d015400_T002","Zm00001d015400","sp|A4SML8|RLMI_AERS4 Ribosomal RNA large subunit methyltransferase I OS=Aeromonas salmonicida (strain A449) GN=rlmI PE=3 SV=1//4.68542e-09",0.954827369566,1.37292326396e-06]
["LNC_002892","XLOC_028737","lncRNA","Zm00001d002350_T001","Zm00001d002350","sp|Q84ZW8|ACSS_MAIZE Acyclic sesquiterpene synthase OS=Zea mays GN=TPS1 PE=1 SV=1//0",0.951447964804,1.95801542935E-6]
["LNC_002897","XLOC_028753","lncRNA","Zm00001d013589_T008","Zm00001d013589",null,0.976380379852,5.56469463842e-08]
["LNC_002897","XLOC_028753","lncRNA","Zm00001d052282_T038","Zm00001d052282","sp|A4GSN8|NUA_ARATH Nuclear-pore anchor OS=Arabidopsis thaliana GN=NUA PE=1 SV=1//0",0.95692382779,1.08642120811e-06]
["LNC_001162","XLOC_011688","lncRNA","Zm00001d036835_T001","Zm00001d036835","sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1//3.13742e-11",0.954006646989,1.50016900391e-06]
["LNC_001167","XLOC_011696","lncRNA","Zm00001d011119_T023","Zm00001d011119","sp|Q9FXT6|PEX14_ARATH Peroxisomal membrane protein PEX14 OS=Arabidopsis thaliana GN=PEX14 PE=1 SV=2//2.83707e-27",0.98663584952,3.28291283047e-09]
["LNC_001167","XLOC_011696","lncRNA","Zm00001d002455_T004","Zm00001d002455","sp|Q8GYA6|PS13B_ARATH 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana GN=RPN9B PE=1 SV=1//4.06317e-09",0.965743041496,3.50780570368E-7]
["LNC_001165","XLOC_011692","lncRNA","Zm00001d041497_T017","Zm00001d041497","sp|Q2QM84|ARFY_ORYSJ Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1//4.81277e-106",0.990454248817,6.14297945845e-10]
["LNC_001169","XLOC_011706","lncRNA","Zm00001d035048_T007","Zm00001d035048","sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1//3.5048e-10",0.959722152569,7.80193048611e-07]
["LNC_005441","XLOC_054719","lncRNA","Zm00001d049525_T001","Zm00001d049525","sp|Q0J7V9|LSD1_ORYSJ Protein LSD1 OS=Oryza sativa subsp. japonica GN=LSD1 PE=2 SV=1//7.89644e-15",0.966484037436,3.14842504068e-07]
["LNC_005440","XLOC_054715","lncRNA","Zm00001d035767_T001","Zm00001d035767","sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1//1.39482e-54",0.967125619079,2.86149584916e-07]
["LNC_005287","XLOC_052934","lncRNA","Zm00001d017424_T012","Zm00001d017424","sp|Q6H6R9|FTSH7_ORYSJ ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1//3.47586e-47",0.954797217447,1.3774409906E-6]
["LNC_005284","XLOC_052931","lncRNA","Zm00001d000045_T001","Zm00001d000045","sp|Q9LJG8|ASIL2_ARATH Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana GN=ASIL2 PE=2 SV=1//1.93004e-11",0.960994699866,6.65923174381e-07]
["LNC_005281","XLOC_052904","lncRNA","Zm00001d047574_T001","Zm00001d047574","sp|Q9SKD9|WRK46_ARATH Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1//1.43307e-14",0.977730142058,4.15575198698e-08]
["LNC_005281","XLOC_052904","lncRNA","Zm00001d041365_T003","Zm00001d041365","sp|B8A8D2|BBD1_ORYSI Bifunctional nuclease 1 OS=Oryza sativa subsp. indica GN=BBD1 PE=3 SV=1//1.25726e-32",0.989864893061,8.28022095334e-10]
["LNC_005281","XLOC_052904","lncRNA","Zm00001d019343_T001","Zm00001d019343",null,0.954253329865,1.46097905684e-06]
["LNC_005281","XLOC_052904","lncRNA","Zm00001d044589_T001","Zm00001d044589",null,0.980198141105,2.31949268681E-8]
["LNC_002949","XLOC_029109","lncRNA","Zm00001d014659_T001","Zm00001d014659","sp|P81748|MIFH_TRITR Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2//5.90753e-25",0.959424910549,8.09002259405e-07]
["LNC_002949","XLOC_029109","lncRNA","Zm00001d028562_T001","Zm00001d028562","sp|O64422|F16P1_ORYSJ Fructose-1,6-bisphosphatase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0267300 PE=2 SV=1//0",0.961657230683,6.11941778583e-07]
["LNC_002948","XLOC_029080","lncRNA","Zm00001d033015_T001","Zm00001d033015",null,0.953804571927,1.53288979865E-6]
["LNC_002941","XLOC_029016","lncRNA","Zm00001d046786_T001","Zm00001d046786","sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1//2.55363e-143",0.964984295808,3.9088528081e-07]
["LNC_002942","XLOC_029030","lncRNA","Zm00001d014737_T001","Zm00001d014737","sp|Q9LMR3|TYRA2_ARATH Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1//5.23667e-104",0.962696761022,5.34304521294e-07]
["LNC_003587","XLOC_036015","lncRNA","Zm00001d044936_T001","Zm00001d044936","sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum GN=FT1 PE=2 SV=1//7.70837e-156",0.961675592552,6.10496884601e-07]
["LNC_001949","XLOC_019128","lncRNA","Zm00001d034179_T001","Zm00001d034179",null,0.95598150562,1.20863474673e-06]
["LNC_000129","XLOC_001638","lncRNA","Zm00001d032373_T005","Zm00001d032373","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//7.8308e-19",0.963035005163,5.10808036758e-07]
["LNC_004009","XLOC_040657","lncRNA","Zm00001d046039_T014","Zm00001d046039","sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1//2.23826e-19",0.999581818682,0]
["LNC_004007","XLOC_040651","lncRNA","Zm00001d052164_T002","Zm00001d052164","sp|P17847|NIR_MAIZE Ferredoxin--nitrite reductase, chloroplastic (Fragment) OS=Zea mays GN=NIR PE=2 SV=1//2.32557e-49",0.966808458156,3.00061206104e-07]
["LNC_004002","XLOC_040595","lncRNA","Zm00001d018343_T001","Zm00001d018343","sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1//1.73996e-45",0.964828371554,3.99560904807e-07]
["LNC_004001","XLOC_040594","lncRNA","Zm00001d026322_T003","Zm00001d026322","sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=2 SV=2//2.94977e-94",0.951660804881,1.91616514211e-06]
["LNC_004001","XLOC_040594","lncRNA","Zm00001d011551_T001","Zm00001d011551","sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2//0",0.988485371823,1.56367763182e-09]
["LNC_000017","XLOC_000190","lncRNA","Zm00001d017766_T001","Zm00001d017766","sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1//0",0.953653019645,1.55779933064e-06]
["LNC_001386","XLOC_013927","lncRNA","Zm00001d008902_T001","Zm00001d008902","sp|Q9SWW5|PCS1_WHEAT Glutathione gamma-glutamylcysteinyltransferase 1 OS=Triticum aestivum GN=PCS1 PE=2 SV=1//0",-0.954907490674,1.36097574667E-6]
["LNC_005377","XLOC_054199","lncRNA","Zm00001d029274_T001","Zm00001d029274","sp|Q9FEQ8|PER2_MAIZE Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1//0",0.973840087175,9.23425687027e-08]
["LNC_003441","XLOC_034606","lncRNA","Zm00001d008763_T022","Zm00001d008763","sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana GN=ATX2 PE=2 SV=1//7.92345e-07",0.989708626753,8.93621177056e-10]
["LNC_003441","XLOC_034606","lncRNA","Zm00001d039608_T044","Zm00001d039608",null,0.963000598053,5.13159925664e-07]
["LNC_003445","XLOC_034618","lncRNA","Zm00001d021634_T001","Zm00001d021634","sp|Q7EZ57|HS188_ORYSJ 18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.8 PE=2 SV=1//1.3316e-41",0.956000298197,1.20609538756E-6]
["LNC_003444","XLOC_034618","lncRNA","Zm00001d038142_T033","Zm00001d038142","sp|O82782|HIS3_ARATH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Arabidopsis thaliana GN=HISN3 PE=2 SV=1//8.16235e-07",0.99698001972,1.96820337806e-12]
["LNC_003444","XLOC_034618","lncRNA","Zm00001d034170_T001","Zm00001d034170","sp|O43120|UAP2_SCHPO Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uap2 PE=1 SV=1//1.81618e-28",0.963797654093,4.60837542127e-07]
["LNC_004714","XLOC_047166","lncRNA","Zm00001d002951_T001","Zm00001d002951","sp|Q0J8Q3|SGRL_ORYSJ Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0692600 PE=2 SV=1//5.59132e-73",0.983676047617,8.88228335327e-09]
["LNC_004718","XLOC_047220","lncRNA","Zm00001d038113_T001","Zm00001d038113","sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana GN=CLSY3 PE=1 SV=1//0",0.983186999277,1.02865076457E-8]
["LNC_004718","XLOC_047220","lncRNA","Zm00001d022395_T001","Zm00001d022395","sp|Q5HZL9|HDHD3_XENLA Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1//8.89552e-15",0.971228463523,1.47953569396E-7]
["LNC_004718","XLOC_047220","lncRNA","Zm00001d046112_T003","Zm00001d046112","sp|Q94BN2|SPSY_ARATH Spermine synthase OS=Arabidopsis thaliana GN=SPMS PE=1 SV=1//2.17305e-170",0.952904568543,1.68556945912e-06]
["LNC_004718","XLOC_047220","lncRNA","Zm00001d017151_T004","Zm00001d017151",null,0.952604609819,1.73905045209e-06]
["LNC_004718","XLOC_047220","lncRNA","Zm00001d006663_T001","Zm00001d006663","sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1//9.09065e-128",0.956170323963,1.18331249821E-6]
["LNC_004718","XLOC_047220","lncRNA","Zm00001d044606_T001","Zm00001d044606","sp|Q2QX01|GRS12_ORYSJ Monothiol glutaredoxin-S12, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXS12 PE=2 SV=1//1.0937e-152",0.988212341234,1.75726366791E-9]
["LNC_004718","XLOC_047220","lncRNA","Zm00001d013795_T002","Zm00001d013795","sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3//2.30183e-18",0.983733694622,8.7273945848e-09]
["LNC_000831","XLOC_008564","lncRNA","Zm00001d028702_T001","Zm00001d028702","sp|O80362|RK10_TOBAC 50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1//3.22356e-99",0.959138245151,8.37580613311e-07]
["LNC_000831","XLOC_008564","lncRNA","Zm00001d003411_T001","Zm00001d003411","sp|O48609|RRP3_HORVU 30S ribosomal protein 3, chloroplastic OS=Hordeum vulgare GN=PSRP3 PE=2 SV=1//6.97897e-56",0.979755242684,2.58882701942e-08]
["LNC_000839","XLOC_008662","lncRNA","Zm00001d006373_T013","Zm00001d006373","sp|Q8VYC8|RIN2_ARATH E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana GN=RIN2 PE=1 SV=1//2.66619e-28",0.962330613377,5.60699309204e-07]
["LNC_000231","XLOC_002292","lncRNA","Zm00001d003127_T018","Zm00001d003127","sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1//8.66602e-53",0.96912063799,2.09946463769e-07]
["LNC_000231","XLOC_002292","lncRNA","Zm00001d018362_T002","Zm00001d018362","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//5.47496e-41",0.969076626879,2.11431181896e-07]
["LNC_004622","XLOC_046363","lncRNA","Zm00001d052364_T002","Zm00001d052364","sp|Q93WX6|CNIF1_ARATH Cysteine desulfurase 1, chloroplastic OS=Arabidopsis thaliana GN=NFS2 PE=1 SV=1//0",-0.962334987511,5.60377989918e-07]
["LNC_000948","XLOC_009702","lncRNA","Zm00001d011312_T001","Zm00001d011312","sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1//3.86099e-63",0.952065039898,1.83863600123E-6]
["LNC_000948","XLOC_009702","lncRNA","Zm00001d052173_T001","Zm00001d052173",null,0.951211771887,2.00530279093e-06]
["LNC_000947","XLOC_009686","lncRNA","Zm00001d028424_T003","Zm00001d028424","sp|B5XAM2|ICT1_SALSA Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar GN=ict1 PE=2 SV=1//3.29111e-06",0.964742788511,4.04387405117e-07]
["LNC_000942","XLOC_009660","lncRNA","Zm00001d046628_T001","Zm00001d046628","sp|O14155|YE72_SCHPO UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4A8.02c PE=3 SV=1//1.98899e-16",0.95067635374,2.11585397492e-06]
["LNC_000942","XLOC_009660","lncRNA","Zm00001d037897_T001","Zm00001d037897",null,-0.950265107891,2.20400381072e-06]
["LNC_000942","XLOC_009660","lncRNA","Zm00001d028894_T001","Zm00001d028894","sp|Q9LSP7|UBC32_ARATH Ubiquitin-conjugating enzyme E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1//3.98746e-29",0.951324308445,1.9826605957e-06]
["LNC_000942","XLOC_009660","lncRNA","Zm00001d034900_T001","Zm00001d034900","sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1//1.02037e-128",0.968786482073,2.21429664826E-7]
["LNC_000942","XLOC_009660","lncRNA","Zm00001d036759_T004","Zm00001d036759",null,0.976448688772,5.48532219646e-08]
["LNC_000940","XLOC_009593","lncRNA","Zm00001d053624_T001","Zm00001d053624",null,0.95340653987,1.59899643259E-6]
["LNC_000940","XLOC_009593","lncRNA","Zm00001d002626_T001","Zm00001d002626","sp|Q7XU38|C87A3_ORYSJ Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3//0",0.977010039122,4.86662399268e-08]
["LNC_005843","XLOC_058305","lncRNA","Zm00001d039355_T011","Zm00001d039355","sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4 OS=Arabidopsis thaliana GN=ATX4 PE=2 SV=3//0",0.973816091865,9.27631074177e-08]
["LNC_005842","XLOC_058304","lncRNA","Zm00001d002901_T001","Zm00001d002901","sp|P84516|PER1_SORBI Cationic peroxidase SPC4 OS=Sorghum bicolor GN=Sb03g046810 PE=1 SV=2//8.29126e-71",0.960222714325,7.33524211594e-07]
["LNC_005849","XLOC_058342","lncRNA","Zm00001d004400_T001","Zm00001d004400","sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1//9.12955e-144",0.969369721416,2.01699178692E-7]
["LNC_005849","XLOC_058342","lncRNA","Zm00001d026337_T011","Zm00001d026337","sp|Q43846|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1//0",0.965125637494,3.83151089967e-07]
["LNC_005849","XLOC_058342","lncRNA","Zm00001d015004_T002","Zm00001d015004","sp|Q8H0W0|LPA3_ARATH Protein LOW PSII ACCUMULATION 3, chloroplastic OS=Arabidopsis thaliana GN=LPA3 PE=1 SV=1//6.93852e-149",0.96637206575,3.20076453786e-07]
["LNC_005849","XLOC_058342","lncRNA","Zm00001d046683_T002","Zm00001d046683","sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2//4.86741e-28",0.954549716058,1.41497208173e-06]
["LNC_005849","XLOC_058342","lncRNA","Zm00001d047528_T002","Zm00001d047528","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//5.38652e-07",0.960194485852,7.36095519649e-07]
["LNC_005849","XLOC_058342","lncRNA","Zm00001d050317_T001","Zm00001d050317","sp|Q9ZTA3|AOP1C_ARATH Probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Arabidopsis thaliana GN=AOP1 PE=2 SV=1//9.92894e-27",-0.957488971557,1.01797379786e-06]
["LNC_005849","XLOC_058342","lncRNA","Zm00001d020538_T001","Zm00001d020538",null,0.97456181467,8.0385682999e-08]
["LNC_006242","XLOC_061963","lncRNA","Zm00001d033046_T003","Zm00001d033046","sp|Q54EY2|EI2BB_DICDI Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1//7.45866e-11",0.997580477391,6.50368647825e-13]
["LNC_006242","XLOC_061963","lncRNA","Zm00001d047584_T001","Zm00001d047584","sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1//2.12016e-81",0.972946138511,1.09071960797e-07]
["LNC_006088","XLOC_060504","lncRNA","Zm00001d032745_T001","Zm00001d032745","sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1//0",0.951365966585,1.97433065385e-06]
["LNC_000080","XLOC_001166","lncRNA","Zm00001d048887_T001","Zm00001d048887",null,0.953904716371,1.51660398706E-6]
["LNC_002096","XLOC_020866","lncRNA","Zm00001d048217_T004","Zm00001d048217","sp|Q96MW5|COG8_HUMAN Conserved oligomeric Golgi complex subunit 8 OS=Homo sapiens GN=COG8 PE=1 SV=2//6.5306e-89",0.950489358757,2.15558242411e-06]
["LNC_004530","XLOC_045297","lncRNA","Zm00001d028755_T002","Zm00001d028755","sp|P92985|RBP1C_ARATH Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1//1.34462e-59",0.984703911303,6.42759467873e-09]
["LNC_001430","XLOC_014389","lncRNA","Zm00001d053861_T007","Zm00001d053861","sp|B9F2U5|GUFP_ORYSJ Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0157700 PE=3 SV=1//5.07271e-62",0.954654493452,1.39898586893e-06]
["LNC_002852","XLOC_028436","lncRNA","Zm00001d011517_T005","Zm00001d011517",null,0.997063928742,1.70974345792E-12]
["LNC_002852","XLOC_028436","lncRNA","Zm00001d022964_T001","Zm00001d022964",null,0.997115254844,1.56563650933e-12]
["LNC_002544","XLOC_025281","lncRNA","Zm00001d030048_T001","Zm00001d030048","sp|Q55480|YZ37_SYNY3 Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0537 PE=3 SV=1//8.67765e-36",0.962303289355,5.62709818297E-7]
["LNC_002544","XLOC_025281","lncRNA","Zm00001d050921_T003","Zm00001d050921","sp|P34091|RL6_MESCR 60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1//1.61487e-32",0.950412571975,2.17206664677e-06]
["LNC_002544","XLOC_025281","lncRNA","Zm00001d005757_T001","Zm00001d005757","sp|Q6ER21|ZHD9_ORYSJ Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica GN=ZHD9 PE=3 SV=2//3.88748e-36",0.951203103486,2.0070553306e-06]
["LNC_002548","XLOC_025292","lncRNA","Zm00001d048599_T002","Zm00001d048599","sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2//1.50273e-38",0.959802674757,7.72530762472e-07]
["LNC_002548","XLOC_025292","lncRNA","Zm00001d049766_T001","Zm00001d049766","sp|Q9LVD4|ORP4C_ARATH Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana GN=ORP4C PE=2 SV=1//4.58701e-117",-0.954457628179,1.4291416048e-06]
["LNC_002548","XLOC_025292","lncRNA","Zm00001d034897_T001","Zm00001d034897","sp|P19954|PRSP1_SPIOL Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea GN=PSRP1 PE=1 SV=2//1.16945e-82",0.980730158258,2.02601153632E-8]
["LNC_000497","XLOC_005564","lncRNA","Zm00001d047990_T001","Zm00001d047990","sp|Q6NKZ9|Y4345_ARATH Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana GN=At4g34500 PE=2 SV=1//9.54467e-157",0.959772551253,7.75390206931e-07]
["LNC_000493","XLOC_005518","lncRNA","Zm00001d019853_T001","Zm00001d019853",null,0.975327640207,6.90814072613e-08]
["LNC_002407","XLOC_023842","lncRNA","Zm00001d038064_T001","Zm00001d038064","sp|O81117|C94A1_VICSA Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2//1.08427e-116",0.981591724043,1.61415367739e-08]
["LNC_002408","XLOC_023847","lncRNA","Zm00001d052343_T001","Zm00001d052343","sp|Q2RBE3|WNK7_ORYSJ Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica GN=WNK7 PE=2 SV=2//5.95614e-12",0.972734713511,1.13360696385e-07]
["LNC_001705","XLOC_016681","lncRNA","Zm00001d044242_T001","Zm00001d044242","sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1//2.78857e-35",0.958341320369,9.21261721132e-07]
["LNC_001703","XLOC_016628","lncRNA","Zm00001d021732_T001","Zm00001d021732","sp|Q84S11|CSLF2_ORYSJ Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1//0",0.951710236825,1.90654775589E-6]
["LNC_001709","XLOC_016722","lncRNA","Zm00001d044600_T017","Zm00001d044600","sp|P34909|NOT4_YEAST General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MOT2 PE=1 SV=1//2.2761e-15",0.95068404345,2.11423276175E-6]
["LNC_003841","XLOC_039164","lncRNA","Zm00001d036647_T001","Zm00001d036647","sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana GN=BPM1 PE=1 SV=1//8.01061e-42",-0.963584138626,4.74417289242e-07]
["LNC_004824","XLOC_048240","lncRNA","Zm00001d023265_T019","Zm00001d023265","sp|P0C8S1|RP8L2_ARATH Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=3 SV=1//6.43878e-37",0.970976256245,1.54487286519e-07]
["LNC_000799","XLOC_008153","lncRNA","Zm00001d014782_T001","Zm00001d014782","sp|Q5Z9P8|GUN18_ORYSJ Endoglucanase 18 OS=Oryza sativa subsp. japonica GN=Os06g0715300 PE=2 SV=1//0",0.954943212741,1.355675606E-6]
["LNC_005062","XLOC_050790","lncRNA","Zm00001d034586_T001","Zm00001d034586","sp|Q9LHK1|NUD16_ARATH Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1//9.73371e-70",0.976192141102,5.78816630181e-08]
["LNC_005062","XLOC_050790","lncRNA","Zm00001d021558_T001","Zm00001d021558","sp|Q7F1K9|UGHY_ORYSJ Probable (S)-ureidoglycine aminohydrolase OS=Oryza sativa subsp. japonica GN=UGLYAH PE=1 SV=1//9.31775e-173",0.956266179206,1.17061965055e-06]
["LNC_002711","XLOC_026920","lncRNA","Zm00001d010726_T001","Zm00001d010726",null,0.978853947921,3.21387578772e-08]
["LNC_005064","XLOC_050824","lncRNA","Zm00001d037495_T002","Zm00001d037495","sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana GN=NFD4 PE=3 SV=1//1.52502e-08",0.974465286971,8.19091510174e-08]
["LNC_001015","XLOC_010319","lncRNA","Zm00001d002346_T002","Zm00001d002346","sp|Q0J6T3|CADH5_ORYSJ Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2//4.95232e-14",0.994754070577,3.10143022375e-11]
["LNC_000514","XLOC_005671","lncRNA","Zm00001d042351_T001","Zm00001d042351",null,0.957628178436,1.00165145955E-6]
["LNC_000514","XLOC_005671","lncRNA","Zm00001d045603_T049","Zm00001d045603","sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 PE=1 SV=1//3.47943e-107",0.959448836284,8.06652535879e-07]
["LNC_004482","XLOC_044827","lncRNA","Zm00001d040678_T013","Zm00001d040678",null,0.988067827831,1.86720350293e-09]
["LNC_004482","XLOC_044827","lncRNA","Zm00001d025340_T004","Zm00001d025340","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//4.39237e-36",0.955743842012,1.24111704158E-6]
["LNC_004482","XLOC_044827","lncRNA","Zm00001d037830_T001","Zm00001d037830","sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1//3.49122e-42",0.961224666538,6.46774172441e-07]
["LNC_003933","XLOC_039977","lncRNA","Zm00001d051242_T012","Zm00001d051242","sp|Q5YDB6|CPL1_ARATH RNA polymerase II C-terminal domain phosphatase-like 1 OS=Arabidopsis thaliana GN=CPL1 PE=1 SV=1//8.47924e-41",0.952225178325,1.80862004884e-06]
["LNC_003933","XLOC_039977","lncRNA","Zm00001d025981_T005","Zm00001d025981","sp|Q7TP47|HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1//7.0166e-30",0.958757428405,8.76779158387e-07]
["LNC_003932","XLOC_039976","lncRNA","Zm00001d052636_T001","Zm00001d052636","sp|Q9SD53|Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1//1.46974e-43",0.97930577354,2.88707626694e-08]
["LNC_003932","XLOC_039976","lncRNA","Zm00001d034546_T001","Zm00001d034546","sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1//4.71914e-16",0.966952253019,2.93688816821E-7]
["LNC_003932","XLOC_039976","lncRNA","Zm00001d027802_T004","Zm00001d027802","sp|Q9SIW1|BLH7_ARATH BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana GN=BLH7 PE=2 SV=1//6.47368e-94",0.950023612692,2.25710913382e-06]
["LNC_003932","XLOC_039976","lncRNA","Zm00001d035064_T001","Zm00001d035064","sp|Q9SND9|Y3028_ARATH Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=3 SV=1//9.01883e-48",0.96362091071,4.72056167489e-07]
["LNC_003937","XLOC_040059","lncRNA","Zm00001d009714_T002","Zm00001d009714","sp|Q6I581|GH35_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1//0",0.950862345556,2.07691690224e-06]
["LNC_003937","XLOC_040059","lncRNA","Zm00001d010946_T001","Zm00001d010946","sp|Q5ZKQ3|RPAP3_CHICK RNA polymerase II-associated protein 3 OS=Gallus gallus GN=RPAP3 PE=2 SV=1//3.87363e-16",0.958812393391,8.71033245531e-07]
["LNC_001371","XLOC_013673","lncRNA","Zm00001d027309_T001","Zm00001d027309","sp|G4LTX4|DSP4_CASSA Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa GN=DSP4 PE=1 SV=1//7.00096e-38",0.963130906295,5.04297931636e-07]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d049292_T001","Zm00001d049292","sp|Q9ZQ98|U73C2_ARATH UDP-glycosyltransferase 73C2 OS=Arabidopsis thaliana GN=UGT73C2 PE=3 SV=1//1.41391e-42",0.956884285865,1.09134366877E-6]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d022506_T001","Zm00001d022506","sp|Q94KL7|SILD_FORIN Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1//2.25048e-33",-0.97012634453,1.78215418009e-07]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d027752_T015","Zm00001d027752","sp|P73161|TRMB_SYNY3 tRNA (guanine-N(7)-)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=trmB PE=3 SV=2//3.98482e-18",0.972204932277,1.24699104154e-07]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d032739_T006","Zm00001d032739","sp|Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1//1.94082e-13",0.987711769989,2.16163220657e-09]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d030109_T001","Zm00001d030109","sp|O82290|SKL2_ARATH Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana GN=SKL2 PE=2 SV=2//1.91317e-104",0.991938754917,2.6449487045e-10]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d003839_T004","Zm00001d003839",null,0.958835502885,8.68626381489e-07]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d031997_T001","Zm00001d031997","sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1//1.85543e-111",0.981932963152,1.47083065727e-08]
["LNC_001379","XLOC_013723","lncRNA","Zm00001d049026_T011","Zm00001d049026","sp|P19672|YQXC_BACSU Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) GN=yqxC PE=3 SV=3//2.19335e-11",0.979173336059,2.97998576926e-08]
["LNC_001173","XLOC_011730","lncRNA","Zm00001d018660_T001","Zm00001d018660","sp|Q84P23|4CLL9_ARATH 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2//8.35449e-136",0.954694767831,1.39287936141E-6]
["LNC_001173","XLOC_011730","lncRNA","Zm00001d032379_T004","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",0.967852266301,2.56206158511e-07]
["LNC_001173","XLOC_011730","lncRNA","Zm00001d013885_T001","Zm00001d013885","sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1//5.06947e-100",0.966403418047,3.18604014282e-07]
["LNC_001173","XLOC_011730","lncRNA","Zm00001d052556_T001","Zm00001d052556","sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1//0",0.968244045152,2.41129697098e-07]
["LNC_001173","XLOC_011730","lncRNA","Zm00001d049708_T008","Zm00001d049708","sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3//9.08881e-54",-0.959222637037,8.29085422763e-07]
["LNC_001177","XLOC_011765","lncRNA","Zm00001d033850_T008","Zm00001d033850","sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1//8.97562e-12",0.976834346451,5.05395210126e-08]
["LNC_005471","XLOC_054830","lncRNA","Zm00001d026852_T001","Zm00001d026852",null,0.95523754886,1.31262515057e-06]
["LNC_000159","XLOC_001822","lncRNA","Zm00001d051796_T003","Zm00001d051796","sp|E2RBS6|SETD3_CANFA Histone-lysine N-methyltransferase setd3 OS=Canis familiaris GN=SETD3 PE=3 SV=1//1.90208e-11",0.958337501501,9.21678100063e-07]
["LNC_003623","XLOC_036355","lncRNA","Zm00001d047494_T021","Zm00001d047494","sp|P28737|MSP1_YEAST Protein MSP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSP1 PE=1 SV=2//2.86948e-21",0.959698663054,7.82439586677e-07]
["LNC_003623","XLOC_036355","lncRNA","Zm00001d010899_T001","Zm00001d010899",null,0.978991689706,3.11127732466e-08]
["LNC_003620","XLOC_036316","lncRNA","Zm00001d051643_T001","Zm00001d051643",null,0.955975269968,1.20947828042E-6]
["LNC_005276","XLOC_052834","lncRNA","Zm00001d022461_T002","Zm00001d022461","sp|P42736|RAP23_ARATH Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2//2.04169e-18",0.999999889504,0]
["LNC_005276","XLOC_052834","lncRNA","Zm00001d017768_T009","Zm00001d017768",null,0.999834939977,0]
["LNC_005274","XLOC_052803","lncRNA","Zm00001d040221_T002","Zm00001d040221","sp|Q8PSE5|HTPX2_METMA Protease HtpX homolog 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=htpX2 PE=3 SV=1//7.59784e-13",0.9631907295,5.00270443737e-07]
["LNC_005274","XLOC_052803","lncRNA","Zm00001d039076_T003","Zm00001d039076",null,0.954614301168,1.40510109237e-06]
["LNC_000043","XLOC_000637","lncRNA","Zm00001d012301_T001","Zm00001d012301","sp|Q94DE2|BD31A_ORYSJ Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica GN=Os01g0857700 PE=2 SV=1//4.58242e-98",-0.960555992399,7.03702061857e-07]
["LNC_001568","XLOC_015127","lncRNA","Zm00001d004554_T003","Zm00001d004554","sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1//6.77872e-28",0.991677654679,3.10059977693e-10]
["LNC_001568","XLOC_015127","lncRNA","Zm00001d042929_T002","Zm00001d042929","sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1//1.05474e-84",0.991832110297,2.82408985086e-10]
["LNC_002979","XLOC_029469","lncRNA","Zm00001d003929_T001","Zm00001d003929",null,-0.960256147725,7.30488027427e-07]
["LNC_002979","XLOC_029469","lncRNA","Zm00001d007442_T001","Zm00001d007442","sp|Q91WW7|PLPL3_MOUSE Patatin-like phospholipase domain-containing protein 3 OS=Mus musculus GN=Pnpla3 PE=2 SV=1//2.01476e-17",0.963533899187,4.77658310238e-07]
["LNC_002979","XLOC_029469","lncRNA","Zm00001d050844_T005","Zm00001d050844","sp|Q0E079|RIBA2_ORYSJ Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBA2 PE=2 SV=1//7.15597e-35",0.961775965497,6.02646384795E-7]
["LNC_002975","XLOC_029419","lncRNA","Zm00001d051674_T035","Zm00001d051674","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//1.88919e-36",0.953110038648,1.64969461336e-06]
["LNC_001951","XLOC_019164","lncRNA","Zm00001d043615_T001","Zm00001d043615","sp|Q94BT9|ATOX1_ARATH Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=1//3.20547e-09",0.951313020163,1.98492258829E-6]
["LNC_004644","XLOC_046584","lncRNA","Zm00001d034074_T025","Zm00001d034074","sp|P27598|PHSL_IPOBA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1//1.65407e-12",0.965286817112,3.74480397802e-07]
["LNC_000125","XLOC_001567","lncRNA","Zm00001d011510_T001","Zm00001d011510",null,0.967460574952,2.72019527792E-7]
["LNC_000125","XLOC_001567","lncRNA","Zm00001d023341_T001","Zm00001d023341","sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1//1.95831e-24",0.952260244338,1.80209954781e-06]
["LNC_004011","XLOC_040677","lncRNA","Zm00001d027287_T001","Zm00001d027287","sp|Q8H038|KATAM_ORYSJ Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1//6.60168e-60",0.977967700575,3.94035115647e-08]
["LNC_004087","XLOC_041368","lncRNA","Zm00001d009837_T003","Zm00001d009837",null,0.956011787938,1.20454491626e-06]
["LNC_005385","XLOC_054272","lncRNA","Zm00001d051754_T008","Zm00001d051754","sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=2 SV=1//0",0.969009297805,2.13718689857E-7]
["LNC_005389","XLOC_054301","lncRNA","Zm00001d043164_T001","Zm00001d043164","sp|Q0JIF2|CCB11_ORYSJ Cyclin-B1-1 OS=Oryza sativa subsp. japonica GN=CYCB1-1 PE=2 SV=2//5.63153e-171",0.958598137071,8.93601336927e-07]
["LNC_001264","XLOC_012511","lncRNA","Zm00001d002873_T003","Zm00001d002873","sp|Q9FZ89|Y1815_ARATH UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=2 SV=1//5.17335e-14",0.968527816173,2.30657254408e-07]
["LNC_001264","XLOC_012511","lncRNA","Zm00001d017024_T001","Zm00001d017024","sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1//1.86684e-10",0.979679671207,2.63717341298e-08]
["LNC_001264","XLOC_012511","lncRNA","Zm00001d036521_T001","Zm00001d036521","sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1//3.70536e-74",0.969849780984,1.86531977864e-07]
["LNC_001264","XLOC_012511","lncRNA","Zm00001d038668_T001","Zm00001d038668","sp|O34614|YTQB_BACSU Putative rRNA methylase YtqB OS=Bacillus subtilis (strain 168) GN=ytqB PE=3 SV=1//6.17297e-22",0.974029616693,8.90739775272e-08]
["LNC_001264","XLOC_012511","lncRNA","Zm00001d025130_T001","Zm00001d025130","sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2 SV=1//5.84836e-29",0.960791701563,6.83198386309E-7]
["LNC_001264","XLOC_012511","lncRNA","Zm00001d048880_T001","Zm00001d048880","sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1//0",0.952911919999,1.68427532055E-6]
["LNC_003778","XLOC_038460","lncRNA","Zm00001d034520_T002","Zm00001d034520","sp|Q949R9|MPC1_ARATH Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1//9.70611e-59",0.959500301953,8.01616514057e-07]
["LNC_003438","XLOC_034557","lncRNA","Zm00001d012628_T001","Zm00001d012628","sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1//1.76837e-53",-0.950867320685,2.07588322867e-06]
["LNC_003438","XLOC_034557","lncRNA","Zm00001d048558_T001","Zm00001d048558","sp|Q06398|GSTU6_ORYSJ Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2//8.5052e-82",0.958359510846,9.19280426892e-07]
["LNC_003438","XLOC_034557","lncRNA","Zm00001d047442_T001","Zm00001d047442",null,0.966346536482,3.21279412185E-7]
["LNC_004703","XLOC_047115","lncRNA","Zm00001d045665_T001","Zm00001d045665","sp|Q40742|RAD23_ORYSJ Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2//2.81694e-109",0.961219620551,6.47189594138e-07]
["LNC_004703","XLOC_047115","lncRNA","Zm00001d039852_T001","Zm00001d039852","sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2//3.81635e-180",0.953911668624,1.51547850713e-06]
["LNC_004703","XLOC_047115","lncRNA","Zm00001d016019_T001","Zm00001d016019",null,0.954694403718,1.39293447421E-6]
["LNC_004703","XLOC_047115","lncRNA","Zm00001d018652_T001","Zm00001d018652","sp|Q9FLK4|GSXL8_ARATH Flavin-containing monooxygenase FMO GS-OX-like 8 OS=Arabidopsis thaliana GN=At5g61290 PE=2 SV=1//4.91477e-134",0.978701785687,3.33033201017e-08]
["LNC_004703","XLOC_047115","lncRNA","Zm00001d012168_T001","Zm00001d012168","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//7.37537e-20",0.956452379023,1.14627263836E-6]
["LNC_004702","XLOC_047115","lncRNA","Zm00001d022537_T003","Zm00001d022537","sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040, mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2 SV=1//1.95591e-33",0.963447301698,4.83286142217e-07]
["LNC_004702","XLOC_047115","lncRNA","Zm00001d020030_T001","Zm00001d020030",null,0.950364786612,2.18237533689e-06]
["LNC_004702","XLOC_047115","lncRNA","Zm00001d048943_T001","Zm00001d048943","sp|P73920|TXLA_SYNY3 Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=txlA PE=3 SV=1//1.02027e-12",0.952900257445,1.68632874509E-6]
["LNC_004704","XLOC_047115","lncRNA","Zm00001d041067_T001","Zm00001d041067","sp|Q2QR07|SWT13_ORYSJ Bidirectional sugar transporter SWEET13 OS=Oryza sativa subsp. japonica GN=SWEET13 PE=2 SV=1//2.91784e-124",0.957700226593,9.93285652839e-07]
["LNC_004707","XLOC_047116","lncRNA","Zm00001d023311_T034","Zm00001d023311","sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1//7.94873e-65",0.983571123844,9.16982134669e-09]
["LNC_004706","XLOC_047115","lncRNA","Zm00001d042473_T002","Zm00001d042473","sp|Q9LFB8|PTR5_ARATH Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana GN=NPF8.2 PE=2 SV=1//4.37639e-166",0.957153717351,1.05815092644e-06]
["LNC_000426","XLOC_004655","lncRNA","Zm00001d007938_T006","Zm00001d007938","sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1 OS=Arabidopsis thaliana GN=SRFR1 PE=1 SV=1//8.28501e-78",0.952197264741,1.81382392794e-06]
["LNC_000426","XLOC_004655","lncRNA","Zm00001d046172_T001","Zm00001d046172",null,0.950667858192,2.11764622815E-6]
["LNC_000426","XLOC_004655","lncRNA","Zm00001d019573_T001","Zm00001d019573","sp|Q84N49|CAF1P_MAIZE CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1//0",0.975613254018,6.52057181583e-08]
["LNC_000426","XLOC_004655","lncRNA","Zm00001d010198_T001","Zm00001d010198","sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1//6.98433e-136",0.968575163873,2.28945713054E-7]
["LNC_000426","XLOC_004655","lncRNA","Zm00001d046935_T001","Zm00001d046935","sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1//0",0.972357094381,1.21354089888e-07]
["LNC_000426","XLOC_004655","lncRNA","Zm00001d010054_T001","Zm00001d010054","sp|Q0PGJ6|AKRC9_ARATH Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1//3.03466e-29",0.959246506321,8.2669511503e-07]
["LNC_000426","XLOC_004655","lncRNA","Zm00001d004196_T004","Zm00001d004196","sp|Q87L85|DUSA_VIBPA tRNA-dihydrouridine(20/20a) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1//1.37067e-32",0.962750571535,5.30510170016e-07]
["LNC_000427","XLOC_004672","lncRNA","Zm00001d021962_T001","Zm00001d021962","sp|F4IFC5|SYTM2_ARATH Threonine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EMB2761 PE=2 SV=1//0",0.966875665229,2.97069324251e-07]
["LNC_002398","XLOC_023715","lncRNA","Zm00001d050437_T001","Zm00001d050437","sp|Q9SKI4|RFA1A_ARATH Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana GN=RPA1A PE=1 SV=1//6.0262e-10",0.970214243043,1.75634971455E-7]
["LNC_002151","XLOC_021495","lncRNA","Zm00001d033551_T013","Zm00001d033551","sp|A2ARP1|VIP1_MOUSE Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 OS=Mus musculus GN=Ppip5k1 PE=2 SV=1//2.37139e-37",0.96787070352,2.55480257394e-07]
["LNC_002156","XLOC_021531","lncRNA","Zm00001d039607_T001","Zm00001d039607","sp|F8WKW0|UGT1_GARJA Crocetin glucosyltransferase, chloroplastic OS=Gardenia jasminoides GN=UGT75L6 PE=1 SV=1//1.714e-97",0.983012048786,1.08297730783e-08]
["LNC_003548","XLOC_035747","lncRNA","Zm00001d015459_T003","Zm00001d015459","sp|Q6ETN3|4CL3_ORYSJ Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1//8.59997e-80",0.95977531252,7.75127746877e-07]
["LNC_003548","XLOC_035747","lncRNA","Zm00001d038072_T001","Zm00001d038072","sp|Q9SV05|CCR35_ARATH Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1//7.13476e-91",0.951262272169,1.99511698029e-06]
["LNC_004635","XLOC_046493","lncRNA","Zm00001d039847_T001","Zm00001d039847",null,0.963087683994,5.07223798074E-7]
["LNC_004635","XLOC_046493","lncRNA","Zm00001d042141_T001","Zm00001d042141","sp|P12257|GUB2_HORVU Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1//4.00144e-100",0.956030147784,1.20207065035e-06]
["LNC_005727","XLOC_057421","lncRNA","Zm00001d046681_T001","Zm00001d046681","sp|Q67VS7|CSLA9_ORYSJ Probable mannan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLA9 PE=2 SV=1//0",0.953121916188,1.64763948618E-6]
["LNC_005723","XLOC_057406","lncRNA","Zm00001d034663_T001","Zm00001d034663","sp|Q852A1|EXPA7_ORYSJ Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1//6.95758e-154",0.965696554102,3.53139397502e-07]
["LNC_006259","XLOC_062091","lncRNA","Zm00001d000092_T001","Zm00001d000092",null,0.951834178615,1.88260215528e-06]
["LNC_006254","XLOC_062040","lncRNA","Zm00001d025992_T001","Zm00001d025992",null,0.958026843406,9.56053899381e-07]
["LNC_001577","XLOC_015217","lncRNA","Zm00001d013861_T002","Zm00001d013861",null,0.964375451272,4.25632866063e-07]
["LNC_001577","XLOC_015217","lncRNA","Zm00001d013443_T001","Zm00001d013443","sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1//1.09639e-51",0.974388183373,8.31424999959e-08]
["LNC_001577","XLOC_015217","lncRNA","Zm00001d032230_T001","Zm00001d032230","sp|B1B1U3|ZSS1_ZINZE Alpha-humulene synthase OS=Zingiber zerumbet GN=ZSS1 PE=1 SV=1//1.67143e-112",0.96666172103,3.06676871453e-07]
["LNC_001576","XLOC_015209","lncRNA","Zm00001d045014_T020","Zm00001d045014","sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=2//5.50266e-66",0.963042766165,5.10278721944e-07]
["LNC_001576","XLOC_015209","lncRNA","Zm00001d027401_T008","Zm00001d027401","sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1//3.33328e-132",0.958856610364,8.66432647184e-07]
["LNC_001573","XLOC_015158","lncRNA","Zm00001d007349_T001","Zm00001d007349",null,0.971985326678,1.29655756131e-07]
["LNC_006091","XLOC_060526","lncRNA","Zm00001d019836_T009","Zm00001d019836","sp|Q9FIK8|CAR11_ARATH Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana GN=CAR11 PE=2 SV=1//2.32031e-35",-0.950921968079,2.06455606972e-06]
["LNC_003098","XLOC_030855","lncRNA","Zm00001d008334_T001","Zm00001d008334","sp|Q9M9W7|PME22_ARATH Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1//2.19918e-157",0.95818724569,9.38179812948e-07]
["LNC_003098","XLOC_030855","lncRNA","Zm00001d051592_T001","Zm00001d051592",null,0.970097200432,1.79077632723e-07]
["LNC_004521","XLOC_045227","lncRNA","Zm00001d009990_T001","Zm00001d009990","sp|P41980|SODM4_MAIZE Superoxide dismutase [Mn] 3.4, mitochondrial OS=Zea mays GN=SODA.3 PE=2 SV=1//7.01124e-152",0.950087421214,2.24297993312e-06]
["LNC_004520","XLOC_045227","lncRNA","Zm00001d028953_T001","Zm00001d028953",null,0.950848490886,2.07979761324e-06]
["LNC_004526","XLOC_045265","lncRNA","Zm00001d048669_T001","Zm00001d048669","sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1//0",0.960312053226,7.25433399129e-07]
["LNC_002574","XLOC_025442","lncRNA","Zm00001d047079_T002","Zm00001d047079",null,0.955745334286,1.24091094866E-6]
["LNC_002575","XLOC_025444","lncRNA","Zm00001d040805_T014","Zm00001d040805","sp|Q5ZAJ0|RBOHB_ORYSJ Respiratory burst oxidase homolog protein B OS=Oryza sativa subsp. japonica GN=RBOHB PE=1 SV=1//0",0.957800486424,9.81736499428e-07]
["LNC_002050","XLOC_020176","lncRNA","Zm00001d037307_T001","Zm00001d037307",null,0.960953304695,6.69417423715e-07]
["LNC_002050","XLOC_020176","lncRNA","Zm00001d003499_T001","Zm00001d003499","sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2 SV=2//9.00473e-29",0.958947785298,8.57007189436e-07]
["LNC_002050","XLOC_020176","lncRNA","Zm00001d007231_T002","Zm00001d007231","sp|Q10N05|GT32_ORYSJ Probable glucuronosyltransferase Os03g0287800 OS=Oryza sativa subsp. japonica GN=Os03g0287800 PE=3 SV=1//1.32649e-58",0.973160340473,1.04859666505E-7]
["LNC_002050","XLOC_020176","lncRNA","Zm00001d030222_T001","Zm00001d030222",null,0.97482225171,7.63875975807e-08]
["LNC_003361","XLOC_033572","lncRNA","Zm00001d017685_T007","Zm00001d017685","sp|B2V2I6|DNAJ_CLOBA Chaperone protein DnaJ OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=dnaJ PE=3 SV=1//2.49957e-16",-0.964593218274,4.12933719885E-7]
["LNC_003361","XLOC_033572","lncRNA","Zm00001d011944_T001","Zm00001d011944","sp|Q94AY3|DRIP2_ARATH E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1//3.44567e-10",0.961230316308,6.46309294527e-07]
["LNC_003367","XLOC_033627","lncRNA","Zm00001d003099_T001","Zm00001d003099","sp|Q9QZI8|SERC1_MOUSE Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1//2.78361e-18",0.954205745527,1.46847469007E-6]
["LNC_000621","XLOC_006651","lncRNA","Zm00001d028712_T016","Zm00001d028712","sp|Q9SA96|AROD1_ARATH Arogenate dehydratase/prephenate dehydratase 1, chloroplastic OS=Arabidopsis thaliana GN=ADT1 PE=1 SV=1//6.23092e-22",0.957073573536,1.06793933341E-6]
["LNC_000626","XLOC_006696","lncRNA","Zm00001d046968_T001","Zm00001d046968","sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana GN=BPM1 PE=1 SV=1//1.65432e-57",0.967862003493,2.55822586448e-07]
["LNC_000626","XLOC_006696","lncRNA","Zm00001d052974_T001","Zm00001d052974","sp|Q9ZQX6|ETOL1_ARATH ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL1 PE=1 SV=1//6.17759e-11",0.951447082719,1.95819036719e-06]
["LNC_000626","XLOC_006696","lncRNA","Zm00001d052835_T001","Zm00001d052835","sp|C0LGR3|Y4265_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=2 SV=1//0",0.960747507274,6.87006097566e-07]
["LNC_003419","XLOC_034203","lncRNA","Zm00001d005372_T005","Zm00001d005372",null,0.951121065637,2.02370161384e-06]
["LNC_003775","XLOC_038414","lncRNA","Zm00001d053067_T001","Zm00001d053067","sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1//1.46607e-118",-0.960110332157,7.43803530867e-07]
["LNC_003775","XLOC_038414","lncRNA","Zm00001d035439_T001","Zm00001d035439","sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica GN=OSH71 PE=2 SV=1//9.60682e-72",0.959460230108,8.05535466775e-07]
["LNC_003775","XLOC_038414","lncRNA","Zm00001d020282_T001","Zm00001d020282",null,0.990355052633,6.46778630653e-10]
["LNC_003775","XLOC_038414","lncRNA","Zm00001d045539_T001","Zm00001d045539","sp|O04066|ACBP_RICCO Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1//8.2403e-43",-0.951265951198,1.99437653401e-06]
["LNC_001712","XLOC_016749","lncRNA","Zm00001d053917_T019","Zm00001d053917","sp|Q9LKI5|XPF_ARATH DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 PE=1 SV=2//1.11085e-95",0.980249890547,2.28954126769E-8]
["LNC_003171","XLOC_031560","lncRNA","Zm00001d014656_T003","Zm00001d014656","sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2 SV=2//2.41456e-56",0.983561855384,9.19557363588e-09]
["LNC_004385","XLOC_044041","lncRNA","Zm00001d024990_T001","Zm00001d024990","sp|Q9C646|RX24L_ARATH Probable disease resistance protein RXW24L OS=Arabidopsis thaliana GN=RXW24L PE=2 SV=1//4.15692e-12",0.95779697111,9.82139623851e-07]
["LNC_004832","XLOC_048339","lncRNA","Zm00001d026337_T009","Zm00001d026337","sp|Q43846|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1//0",0.975703231409,6.40213362324e-08]
["LNC_004832","XLOC_048339","lncRNA","Zm00001d020442_T001","Zm00001d020442",null,-0.971951086279,1.30442517238E-7]
["LNC_004832","XLOC_048339","lncRNA","Zm00001d019343_T001","Zm00001d019343",null,0.961071692956,6.59462586317e-07]
["LNC_004832","XLOC_048339","lncRNA","Zm00001d049440_T005","Zm00001d049440","sp|Q0J7J7|CAF2M_ORYSJ CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2//1.27513e-34",0.953358287652,1.6071616229E-6]
["LNC_004832","XLOC_048339","lncRNA","Zm00001d038623_T002","Zm00001d038623","sp|Q60EA5|SCAM3_ORYSJ Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1//4.48154e-51",-0.9639038406,4.54200066987e-07]
["LNC_004832","XLOC_048339","lncRNA","Zm00001d032310_T001","Zm00001d032310","sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1//2.52792e-96",-0.9521673675,1.81941078336E-6]
["LNC_005838","XLOC_058259","lncRNA","Zm00001d042432_T059","Zm00001d042432","sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica GN=DCL3A PE=2 SV=1//1.20144e-50",0.999990291968,0]
["LNC_005838","XLOC_058259","lncRNA","Zm00001d026511_T044","Zm00001d026511","sp|Q9LJD8|M3KE1_ARATH MAP3K epsilon protein kinase 1 OS=Arabidopsis thaliana GN=M3KE1 PE=1 SV=1//0",0.991192813513,4.11197964567e-10]
["LNC_005838","XLOC_058259","lncRNA","Zm00001d044566_T021","Zm00001d044566","sp|Q9SHJ3|CALS7_ARATH Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=3 SV=3//1.67493e-143",0.998991752516,8.21565038223e-15]
["LNC_002709","XLOC_026884","lncRNA","Zm00001d013769_T001","Zm00001d013769",null,0.982524782888,1.24644239374E-8]
["LNC_002709","XLOC_026884","lncRNA","Zm00001d002959_T002","Zm00001d002959","sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1//1.69916e-42",0.977710490151,4.17398258179e-08]
["LNC_002709","XLOC_026884","lncRNA","Zm00001d033160_T001","Zm00001d033160","sp|P50287|ASPGA_ARATH Isoaspartyl peptidase/L-asparaginase 1 OS=Arabidopsis thaliana GN=At5g08100 PE=1 SV=2//1.5946e-121",0.979018160091,3.09186316549e-08]
["LNC_002708","XLOC_026883","lncRNA","Zm00001d003140_T001","Zm00001d003140","sp|Q43257|C71C4_MAIZE indole-2-monooxygenase OS=Zea mays GN=CYP71C4 PE=1 SV=1//7.66723e-152",0.96210927567,5.7715075874e-07]
["LNC_002708","XLOC_026883","lncRNA","Zm00001d038562_T001","Zm00001d038562","sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1//1.25762e-156",0.969449679332,1.99107133003E-7]
["LNC_002700","XLOC_026718","lncRNA","Zm00001d042634_T002","Zm00001d042634","sp|Q949R4|DIOXL_ARATH Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana GN=LIGB PE=2 SV=1//2.60858e-111",0.955946664268,1.2133539351e-06]
["LNC_005016","XLOC_050148","lncRNA","Zm00001d050606_T028","Zm00001d050606","sp|Q66X93|SND1_RAT Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus GN=Snd1 PE=2 SV=1//9.05455e-135",0.953167443464,1.63978087597E-6]
["LNC_005752","XLOC_057592","lncRNA","Zm00001d053342_T003","Zm00001d053342",null,0.962208326618,5.69741806622e-07]
["LNC_005752","XLOC_057592","lncRNA","Zm00001d009439_T002","Zm00001d009439","sp|F4IHJ0|SFH8_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1//0",0.952971431066,1.67382808014e-06]
["LNC_005752","XLOC_057592","lncRNA","Zm00001d036877_T001","Zm00001d036877","sp|Q9LVZ7|PDCT1_ARATH Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1 OS=Arabidopsis thaliana GN=ROD1 PE=1 SV=1//6.1713e-84",0.97847945431,3.5065150783e-08]
["LNC_001007","XLOC_010214","lncRNA","Zm00001d032379_T001","Zm00001d032379","sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1//8.02239e-26",0.97687538798,5.00968686534e-08]
["LNC_003947","XLOC_040121","lncRNA","Zm00001d023468_T001","Zm00001d023468","sp|Q9SJ52|YLS9_ARATH Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1//1.08774e-08",0.980384086493,2.21330620498e-08]
["LNC_003947","XLOC_040121","lncRNA","Zm00001d053772_T001","Zm00001d053772","sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1//2.37903e-09",0.951371053025,1.97331547636e-06]
["LNC_003947","XLOC_040121","lncRNA","Zm00001d002609_T001","Zm00001d002609","sp|Q8H038|KATAM_ORYSJ Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1//8.251e-85",0.972721514281,1.13632827814E-7]
["LNC_003947","XLOC_040121","lncRNA","Zm00001d011769_T001","Zm00001d011769","sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1//5.62547e-77",0.964908978871,3.95057008884E-7]
["LNC_003466","XLOC_034882","lncRNA","Zm00001d016991_T001","Zm00001d016991","sp|B3EWI4|PST2_PETHY Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida PE=1 SV=1//2.8498e-06",0.981351334762,1.72164191792e-08]
["LNC_003466","XLOC_034882","lncRNA","Zm00001d030557_T001","Zm00001d030557","sp|P34106|ALA2_PANMI Alanine aminotransferase 2 OS=Panicum miliaceum PE=1 SV=1//0",0.965311051264,3.73190325087e-07]
["LNC_005534","XLOC_055344","lncRNA","Zm00001d044692_T001","Zm00001d044692",null,0.963644890359,4.70521481999e-07]
["LNC_005534","XLOC_055344","lncRNA","Zm00001d008549_T002","Zm00001d008549","sp|Q9LQK7|AB7I_ARATH Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1//3.28093e-23",0.97899542131,3.10853458529e-08]
["LNC_005534","XLOC_055344","lncRNA","Zm00001d007288_T005","Zm00001d007288","sp|Q93YZ7|ILVH2_ARATH Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1//2.57044e-11",0.970806931164,1.59001203759E-7]
["LNC_005534","XLOC_055344","lncRNA","Zm00001d021295_T007","Zm00001d021295","sp|Q02104|LIP1_PSYIM Lipase 1 OS=Psychrobacter immobilis GN=lip1 PE=1 SV=2//3.18516e-07",0.955496115295,1.27570840514E-6]
["LNC_005534","XLOC_055344","lncRNA","Zm00001d022113_T004","Zm00001d022113","sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1//1.75845e-62",0.968471975822,2.32688857738e-07]
["LNC_000443","XLOC_004895","lncRNA","Zm00001d048655_T014","Zm00001d048655","sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=3 SV=2//1.13267e-26",0.961729944779,6.06235794898e-07]
["LNC_000443","XLOC_004895","lncRNA","Zm00001d046277_T012","Zm00001d046277","sp|Q5Z9S8|AB42G_ORYSJ ABC transporter G family member 42 OS=Oryza sativa subsp. japonica GN=ABCG42 PE=2 SV=1//0",0.961729841195,6.06243892864e-07]
["LNC_006263","XLOC_062127","lncRNA","Zm00001d049247_T001","Zm00001d049247","sp|P0C042|Y4597_ARATH Uncharacterized protein At4g15970 OS=Arabidopsis thaliana GN=At4g15970 PE=2 SV=1//6.28835e-63",0.964427484049,4.22570709535e-07]
["LNC_005707","XLOC_057253","lncRNA","Zm00001d020339_T001","Zm00001d020339","sp|Q9UT45|ENG1_SCHPO Endo-1,3(4)-beta-glucanase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eng1 PE=3 SV=1//1.24711e-27",0.984944094314,5.94094862194e-09]
["LNC_005707","XLOC_057253","lncRNA","Zm00001d010596_T001","Zm00001d010596","sp|Q6ATW6|G1L8_ORYSJ Protein G1-like8 OS=Oryza sativa subsp. japonica GN=G1L8 PE=1 SV=1//7.11022e-78",0.990021328442,7.6626260892e-10]
["LNC_005707","XLOC_057253","lncRNA","Zm00001d011241_T001","Zm00001d011241","sp|Q9M670|RTM2_ARATH Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=2 SV=1//6.90347e-08",0.991391439913,3.66996433243E-10]
["LNC_005707","XLOC_057253","lncRNA","Zm00001d035829_T003","Zm00001d035829",null,0.961381833103,6.33940790973e-07]
["LNC_005707","XLOC_057253","lncRNA","Zm00001d034818_T001","Zm00001d034818","sp|Q9STM6|GDL57_ARATH GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1//2.57267e-95",0.974647061129,7.90591103694e-08]
["LNC_005707","XLOC_057253","lncRNA","Zm00001d028504_T001","Zm00001d028504","sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1//4.01977e-44",0.969123230301,2.09859271516e-07]
["LNC_005465","XLOC_054804","lncRNA","Zm00001d010825_T001","Zm00001d010825","sp|O80522|GDL2_ARATH GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1//2.63849e-94",0.963036340161,5.10716956281e-07]
["LNC_000149","XLOC_001791","lncRNA","Zm00001d002323_T023","Zm00001d002323",null,0.969567004028,1.95351798737E-7]
["LNC_000149","XLOC_001791","lncRNA","Zm00001d027334_T024","Zm00001d027334","sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE=1 SV=3//2.97265e-12",0.9696544134,1.92590813075e-07]
["LNC_000149","XLOC_001791","lncRNA","Zm00001d052243_T001","Zm00001d052243","sp|Q6Z8L2|LAC9_ORYSJ Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1//0",0.951887996512,1.87227909931E-6]
["LNC_003891","XLOC_039537","lncRNA","Zm00001d021976_T001","Zm00001d021976","sp|Q9M2W8|Y3990_ARATH BTB/POZ domain-containing protein At3g49900 OS=Arabidopsis thaliana GN=At3g49900 PE=2 SV=1//6.65707e-33",0.958894099013,8.62547241187e-07]
["LNC_003893","XLOC_039553","lncRNA","Zm00001d035001_T001","Zm00001d035001","sp|P27787|FER1_MAIZE Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1//6.75107e-60",0.957354020808,1.03399801921e-06]
["LNC_002963","XLOC_029215","lncRNA","Zm00001d020790_T001","Zm00001d020790","sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1//3.58769e-37",0.955212455616,1.31625247768E-6]
["LNC_002961","XLOC_029205","lncRNA","Zm00001d021881_T001","Zm00001d021881",null,0.964725877321,4.05346581633E-7]
["LNC_002961","XLOC_029205","lncRNA","Zm00001d027729_T001","Zm00001d027729","sp|Q94AQ8|PNSB2_ARATH Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana GN=PNSB2 PE=2 SV=1//5.69648e-102",0.97375230975,9.38883646384e-08]
["LNC_002961","XLOC_029205","lncRNA","Zm00001d012806_T002","Zm00001d012806",null,0.980312631965,2.25364238382e-08]
["LNC_002961","XLOC_029205","lncRNA","Zm00001d015115_T002","Zm00001d015115","sp|Q6Z2L5|KPRS1_ORYSJ Ribose-phosphate pyrophosphokinase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0127700 PE=2 SV=2//1.19191e-58",0.967100425745,2.87235508711e-07]
["LNC_002960","XLOC_029188","lncRNA","Zm00001d022449_T003","Zm00001d022449","sp|Q7XIV8|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1//0",0.967064336792,2.88796782044e-07]
["LNC_002960","XLOC_029188","lncRNA","Zm00001d001848_T014","Zm00001d001848","sp|Q9NZJ4|SACS_HUMAN Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2//3.053e-12",0.969931389071,1.84046482055E-7]
["LNC_002960","XLOC_029188","lncRNA","Zm00001d027454_T002","Zm00001d027454",null,0.9581725827,9.39802643485e-07]
["LNC_002966","XLOC_029276","lncRNA","Zm00001d018716_T001","Zm00001d018716","sp|Q9XI78|FUT8_ARATH Probable fucosyltransferase 8 OS=Arabidopsis thaliana GN=FUT8 PE=2 SV=2//5.23607e-129",0.96760480071,2.66109075886e-07]
["LNC_005866","XLOC_058527","lncRNA","Zm00001d004868_T014","Zm00001d004868","sp|Q9XIN0|LHW_ARATH Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1//2.05678e-12",0.969305400084,2.03803751653E-7]
["LNC_001923","XLOC_018826","lncRNA","Zm00001d045551_T008","Zm00001d045551","sp|F4K1G2|AEE19_ARATH Putative acyl-activating enzyme 19 OS=Arabidopsis thaliana GN=At5g35930 PE=2 SV=1//1.24449e-22",0.980553436991,2.12000352828e-08]
["LNC_004024","XLOC_040847","lncRNA","Zm00001d043259_T001","Zm00001d043259","sp|Q9ZR07|FRDA_ARATH Frataxin, mitochondrial OS=Arabidopsis thaliana GN=FH PE=1 SV=2//1.11934e-46",0.95838092977,9.1695183202e-07]
["LNC_003760","XLOC_038257","lncRNA","Zm00001d011420_T001","Zm00001d011420","sp|Q9LUC6|C7A14_ARATH Cytochrome P450 72A14 OS=Arabidopsis thaliana GN=CYP72A14 PE=2 SV=1//7.05091e-177",0.973864960054,9.19082534523e-08]
["LNC_003768","XLOC_038344","lncRNA","Zm00001d041180_T004","Zm00001d041180","sp|F4K3G5|EDM2_ARATH Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana GN=EDM2 PE=1 SV=1//9.39107e-42",0.9687630857,2.22252011906E-7]
["LNC_003769","XLOC_038345","lncRNA","Zm00001d048479_T002","Zm00001d048479","sp|Q94JX9|NACA2_ARATH Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2//2.31527e-53",0.958851876609,8.66924250831e-07]
["LNC_003769","XLOC_038345","lncRNA","Zm00001d044099_T004","Zm00001d044099","sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1//8.20401e-108",0.952607265192,1.73857118213e-06]
["LNC_005396","XLOC_054380","lncRNA","Zm00001d024340_T001","Zm00001d024340","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//6.64703e-16",0.972591649634,1.16338115141E-7]
["LNC_005390","XLOC_054315","lncRNA","Zm00001d051163_T001","Zm00001d051163","sp|A2X7F7|PAL2_ORYSI Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1//0",0.955764132646,1.23831709553e-06]
["LNC_005390","XLOC_054315","lncRNA","Zm00001d013595_T001","Zm00001d013595",null,0.986825486965,3.05747827056e-09]
["LNC_005390","XLOC_054315","lncRNA","Zm00001d021489_T001","Zm00001d021489","sp|A4IJ27|ROGF3_ARATH Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana GN=ROPGEF3 PE=2 SV=1//1.1866e-133",0.951340114837,1.97949668168e-06]
["LNC_005390","XLOC_054315","lncRNA","Zm00001d028569_T005","Zm00001d028569",null,0.97509323551,7.23974078465e-08]
["LNC_005390","XLOC_054315","lncRNA","Zm00001d046655_T001","Zm00001d046655","sp|Q6R2J8|SRF8_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1//0",0.966817350525,2.99663971415e-07]
["LNC_005390","XLOC_054315","lncRNA","Zm00001d009248_T010","Zm00001d009248","sp|Q5ZAJ0|RBOHB_ORYSJ Respiratory burst oxidase homolog protein B OS=Oryza sativa subsp. japonica GN=RBOHB PE=1 SV=1//0",0.976457186752,5.47551128882e-08]
["LNC_001814","XLOC_018022","lncRNA","Zm00001d037240_T009","Zm00001d037240","sp|Q8LE52|DHAR3_ARATH Glutathione S-transferase DHAR3, chloroplastic OS=Arabidopsis thaliana GN=DHAR3 PE=1 SV=1//2.7762e-78",0.967083948691,2.87947500954e-07]
["LNC_001814","XLOC_018022","lncRNA","Zm00001d017920_T001","Zm00001d017920","sp|Q6YWR4|HOX16_ORYSJ Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1//8.93554e-115",0.967447143729,2.72575217508E-7]
["LNC_001814","XLOC_018022","lncRNA","Zm00001d053782_T004","Zm00001d053782","sp|O48921|C97B2_SOYBN Cytochrome P450 97B2, chloroplastic OS=Glycine max GN=CYP97B2 PE=2 SV=1//1.30439e-38",0.959964235692,7.57337349722e-07]
["LNC_001814","XLOC_018022","lncRNA","Zm00001d007092_T001","Zm00001d007092","sp|A2BW76|EFTS_PROM5 Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1//2.04558e-73",0.962328634252,5.60844741759e-07]
["LNC_001814","XLOC_018022","lncRNA","Zm00001d010204_T001","Zm00001d010204","sp|Q6P7K0|CMBL_XENTR Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1//7.78681e-19",0.974467396891,8.18756067389e-08]
["LNC_005399","XLOC_054392","lncRNA","Zm00001d032961_T018","Zm00001d032961","sp|Q6ET36|CPS1_ORYSJ Ent-copalyl diphosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CPS1 PE=2 SV=1//1.84551e-16",0.966128725373,3.31689752109e-07]
["LNC_005399","XLOC_054392","lncRNA","Zm00001d022367_T001","Zm00001d022367","sp|A3BMZ5|BGL26_ORYSJ Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1//0",0.978526409487,3.46870141499e-08]
["LNC_001188","XLOC_011838","lncRNA","Zm00001d040624_T001","Zm00001d040624",null,0.969477701928,1.98205006852e-07]
["LNC_003426","XLOC_034358","lncRNA","Zm00001d022099_T001","Zm00001d022099","sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1//6.1646e-69",0.967844693994,2.56504766538E-7]
["LNC_003426","XLOC_034358","lncRNA","Zm00001d005657_T002","Zm00001d005657",null,0.985016406979,5.80034553721e-09]
["LNC_005483","XLOC_054914","lncRNA","Zm00001d009459_T001","Zm00001d009459",null,0.951846523244,1.88023029546E-6]
["LNC_000855","XLOC_008805","lncRNA","Zm00001d027729_T001","Zm00001d027729","sp|Q94AQ8|PNSB2_ARATH Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana GN=PNSB2 PE=2 SV=1//5.69648e-102",0.95608068757,1.19528048681E-6]
["LNC_000855","XLOC_008805","lncRNA","Zm00001d032385_T002","Zm00001d032385","sp|P55238|GLGS_HORVU Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1//0",0.965116807599,3.83630667233e-07]
["LNC_000855","XLOC_008805","lncRNA","Zm00001d019343_T001","Zm00001d019343",null,0.973138333958,1.05286355856e-07]
["LNC_000855","XLOC_008805","lncRNA","Zm00001d008962_T001","Zm00001d008962",null,0.985174220885,5.50270873312e-09]
["LNC_000855","XLOC_008805","lncRNA","Zm00001d045740_T001","Zm00001d045740","sp|Q9H2H9|S38A1_HUMAN Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1//3.55177e-18",0.965549160301,3.60701864599e-07]
["LNC_000855","XLOC_008805","lncRNA","Zm00001d013795_T002","Zm00001d013795","sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3//2.30183e-18",0.983201736568,1.0241756776E-8]
["LNC_002386","XLOC_023629","lncRNA","Zm00001d006828_T001","Zm00001d006828","sp|Q9LF24|LNG1_ARATH Protein LONGIFOLIA 1 OS=Arabidopsis thaliana GN=LNG1 PE=1 SV=1//4.61775e-24",-0.9529784982,1.67259085956E-6]
["LNC_002241","XLOC_022170","lncRNA","Zm00001d039337_T001","Zm00001d039337",null,0.951162939953,2.01519127985e-06]
["LNC_002241","XLOC_022170","lncRNA","Zm00001d020402_T001","Zm00001d020402","sp|Q6ERW9|CAD8B_ORYSJ Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2//3.75194e-180",0.951383441782,1.97084459774e-06]
["LNC_000851","XLOC_008725","lncRNA","Zm00001d034714_T001","Zm00001d034714","sp|Q8L7Y9|NPC1_ARATH Non-specific phospholipase C1 OS=Arabidopsis thaliana GN=NPC1 PE=2 SV=1//0",0.963279113835,4.94366963366e-07]
["LNC_000852","XLOC_008782","lncRNA","Zm00001d021537_T001","Zm00001d021537","sp|Q9SPG3|MYB26_ARATH Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1//7.52452e-52",0.958604831204,8.92889274073e-07]
["LNC_000852","XLOC_008782","lncRNA","Zm00001d038688_T001","Zm00001d038688","sp|Q68Y52|RAC2_ORYSJ Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica GN=RAC2 PE=2 SV=1//5.95997e-136",0.967209633882,2.82551823272e-07]
["LNC_000852","XLOC_008782","lncRNA","Zm00001d014611_T001","Zm00001d014611","sp|Q0D9V6|STAR1_ORYSJ Protein STAR1 OS=Oryza sativa subsp. japonica GN=STAR1 PE=1 SV=1//2.98361e-125",0.96213403735,5.75291463356e-07]
["LNC_000858","XLOC_008829","lncRNA","Zm00001d026563_T001","Zm00001d026563","sp|Q9LDE4|ERF83_ARATH Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1//1.28529e-16",0.961933822483,5.90462360561e-07]
["LNC_000858","XLOC_008829","lncRNA","Zm00001d048627_T002","Zm00001d048627","sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp. japonica GN=ACLA-2 PE=2 SV=2//0",0.968012664272,2.49945677488e-07]
["LNC_002146","XLOC_021442","lncRNA","Zm00001d043101_T001","Zm00001d043101","sp|O22682|CYSK4_ARATH Probable S-sulfocysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=1 SV=1//1.75503e-32",0.967477992782,2.71300242716E-7]
["LNC_002146","XLOC_021442","lncRNA","Zm00001d046336_T001","Zm00001d046336","sp|Q40078|VATB1_HORVU V-type proton ATPase subunit B 1 OS=Hordeum vulgare PE=2 SV=1//1.39339e-92",0.951570924802,1.93375061386e-06]
["LNC_002146","XLOC_021442","lncRNA","Zm00001d051180_T001","Zm00001d051180",null,-0.963884643776,4.55394352782E-7]
["LNC_002146","XLOC_021442","lncRNA","Zm00001d026244_T001","Zm00001d026244","sp|Q9I6J0|SPUE_PSEAE Spermidine-binding periplasmic protein SpuE OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=spuE PE=1 SV=1//1.24258e-15",0.974278461011,8.49230741284e-08]
["LNC_002358","XLOC_023321","lncRNA","Zm00001d045217_T002","Zm00001d045217","sp|Q0WUG6|SBT61_ARATH Subtilisin-like protease SBT6.1 OS=Arabidopsis thaliana GN=SBT6.1 PE=1 SV=1//1.02584e-61",0.967987617316,2.50915178857e-07]
["LNC_003556","XLOC_035844","lncRNA","Zm00001d035034_T002","Zm00001d035034","sp|P43188|KADC_MAIZE Adenylate kinase, chloroplastic OS=Zea mays GN=ADK1 PE=1 SV=1//8.33703e-158",0.967555175882,2.68131081338e-07]
["LNC_003556","XLOC_035844","lncRNA","Zm00001d019184_T002","Zm00001d019184","sp|P50846|ALKH_BACSU KHG/KDPG aldolase OS=Bacillus subtilis (strain 168) GN=kdgA PE=2 SV=1//2.7851e-20",0.956128872398,1.1888351068E-6]
["LNC_003556","XLOC_035844","lncRNA","Zm00001d027847_T002","Zm00001d027847",null,0.973545724904,9.76078160519e-08]
["LNC_003559","XLOC_035861","lncRNA","Zm00001d025300_T002","Zm00001d025300","sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana GN=SNF4 PE=1 SV=1//1.44838e-31",0.970698232357,1.61953818578e-07]
["LNC_003558","XLOC_035860","lncRNA","Zm00001d037984_T003","Zm00001d037984","sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1//1.58374e-23",0.966354129281,3.20921258901e-07]
["LNC_003558","XLOC_035860","lncRNA","Zm00001d012672_T005","Zm00001d012672","sp|Q50228|FMDA_METME Formamidase OS=Methylophilus methylotrophus GN=fmdA PE=1 SV=1//2.67459e-113",0.951524544656,1.94287504796e-06]
["LNC_004604","XLOC_046305","lncRNA","Zm00001d014753_T002","Zm00001d014753","sp|Q6DV01|SYF2_GECJA Pre-mRNA-splicing factor syf2 OS=Gecko japonicus GN=syf2 PE=2 SV=1//2.22213e-22",0.956362918085,1.15791962263E-6]
["LNC_005734","XLOC_057455","lncRNA","Zm00001d006607_T158","Zm00001d006607","sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2//5.75424e-77",0.955553063221,1.26768955999e-06]
["LNC_001542","XLOC_014997","lncRNA","Zm00001d025015_T003","Zm00001d025015","sp|Q9FY99|G6PD2_ARATH Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2//1.01585e-37",0.954969629526,1.35176665239e-06]
["LNC_001545","XLOC_015008","lncRNA","Zm00001d018077_T001","Zm00001d018077","sp|Q9SCY3|PNSL4_ARATH Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana GN=PNSL4 PE=1 SV=1//4.59223e-59",0.966890559632,2.96409488509e-07]
["LNC_006269","XLOC_062167","lncRNA","Zm00001d039238_T001","Zm00001d039238","sp|Q9C6T5|STGL3_ARATH Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 SV=1//4.836e-12",0.950638292007,2.12389301213e-06]
["LNC_003032","XLOC_030131","lncRNA","Zm00001d027441_T001","Zm00001d027441","sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1//0",0.989217841646,1.1270899769E-9]
["LNC_003032","XLOC_030131","lncRNA","Zm00001d008173_T001","Zm00001d008173","sp|Q9FEQ8|PER2_MAIZE Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1//3.18918e-67",0.953649667994,1.55835382376E-6]
["LNC_003089","XLOC_030761","lncRNA","Zm00001d031619_T002","Zm00001d031619","sp|Q9C7G0|MA658_ARATH 65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2//2.89055e-153",0.960690741516,6.91921664853E-7]
["LNC_003088","XLOC_030743","lncRNA","Zm00001d015374_T002","Zm00001d015374",null,0.980635414789,2.07597961044E-8]
["LNC_003088","XLOC_030743","lncRNA","Zm00001d038147_T001","Zm00001d038147","sp|Q94A20|BI1L_ARATH BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1//8.31851e-84",-0.957479805381,1.01905591859E-6]
["LNC_003088","XLOC_030743","lncRNA","Zm00001d012931_T001","Zm00001d012931","sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1//3.29881e-162",-0.957148595463,1.05877435183e-06]
["LNC_003088","XLOC_030743","lncRNA","Zm00001d037425_T001","Zm00001d037425","sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana GN=AHL10 PE=1 SV=2//1.17175e-56",0.972680140677,1.14489209224E-7]
["LNC_003088","XLOC_030743","lncRNA","Zm00001d047694_T001","Zm00001d047694","sp|O22775|XXT2_ARATH Xyloglucan 6-xylosyltransferase 2 OS=Arabidopsis thaliana GN=XXT2 PE=1 SV=1//0",-0.960027172218,7.51483374617e-07]
["LNC_006064","XLOC_060276","lncRNA","Zm00001d012307_T003","Zm00001d012307","sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3//1.59645e-23",0.980721142615,2.03072469951e-08]
["LNC_006064","XLOC_060276","lncRNA","Zm00001d016799_T001","Zm00001d016799",null,0.966003289623,3.37805603934e-07]
["LNC_006064","XLOC_060276","lncRNA","Zm00001d035664_T001","Zm00001d035664","sp|Q9ZV24|OP161_ARATH Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana GN=OEP161 PE=1 SV=1//5.81431e-36",0.95608508127,1.19469162252E-6]
["LNC_006064","XLOC_060276","lncRNA","Zm00001d050403_T001","Zm00001d050403","sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1//4.95905e-132",0.992439500385,1.92097893148e-10]
["LNC_005470","XLOC_054829","lncRNA","Zm00001d046442_T001","Zm00001d046442","sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=2 SV=1//3.15173e-10",0.963171872193,5.01537207764e-07]
["LNC_003562","XLOC_035887","lncRNA","Zm00001d007012_T001","Zm00001d007012","sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1//4.57336e-78",0.981067520716,1.8558146575e-08]
["LNC_003562","XLOC_035887","lncRNA","Zm00001d033018_T001","Zm00001d033018","sp|Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1//1.7653e-126",0.952615401167,1.73710336693E-6]
["LNC_003562","XLOC_035887","lncRNA","Zm00001d043680_T001","Zm00001d043680","sp|Q5NAI4|PLA5_ORYSJ Phospholipase A1-II 5 OS=Oryza sativa subsp. japonica GN=Os01g0710700 PE=2 SV=1//0",0.956315893054,1.16407940398e-06]
["LNC_003488","XLOC_035095","lncRNA","Zm00001d037512_T001","Zm00001d037512","sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1//1.5693e-06",0.965533546341,3.61510467339e-07]
["LNC_003488","XLOC_035095","lncRNA","Zm00001d021104_T007","Zm00001d021104","sp|Q8VWF6|SSL3_ARATH Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana GN=SSL3 PE=2 SV=1//2.41993e-21",0.965538926121,3.6123170144e-07]
["LNC_004519","XLOC_045227","lncRNA","Zm00001d020927_T001","Zm00001d020927","sp|Q9LT38|UNCL_ARATH Serine/threonine-protein kinase UCNL OS=Arabidopsis thaliana GN=UCNL PE=2 SV=1//2.83244e-116",0.991641684891,3.16799475542e-10]
["LNC_004519","XLOC_045227","lncRNA","Zm00001d016470_T001","Zm00001d016470","sp|Q6K7B8|ITPK4_ORYSJ Inositol-tetrakisphosphate 1-kinase 4 OS=Oryza sativa subsp. japonica GN=ITPK4 PE=2 SV=1//4.8165e-70",0.950337738014,2.1882276775e-06]
["LNC_004519","XLOC_045227","lncRNA","Zm00001d032902_T001","Zm00001d032902","sp|Q9FM85|Y5564_ARATH Probable receptor-like protein kinase At5g56460 OS=Arabidopsis thaliana GN=At5g56460 PE=2 SV=1//3.85215e-173",0.961813666721,5.99718461114e-07]
["LNC_004517","XLOC_045221","lncRNA","Zm00001d044023_T016","Zm00001d044023","sp|F4JUU5|S2P_ARATH Membrane-bound transcription factor site-2 protease homolog OS=Arabidopsis thaliana GN=S2P PE=2 SV=2//1.1272e-11",0.955885170555,1.22171881412e-06]
["LNC_004517","XLOC_045221","lncRNA","Zm00001d014900_T050","Zm00001d014900","sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3//3.46676e-118",0.955885168783,1.2217190557E-6]
["LNC_000536","XLOC_005913","lncRNA","Zm00001d030766_T001","Zm00001d030766",null,0.962161583889,5.73228656098e-07]
["LNC_000536","XLOC_005913","lncRNA","Zm00001d021557_T001","Zm00001d021557","sp|O80507|CSK2E_ARATH Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1//7.85816e-132",0.95903137285,8.48437827994e-07]
["LNC_000703","XLOC_007232","lncRNA","Zm00001d002690_T007","Zm00001d002690","sp|Q9XF59|PIP12_MAIZE Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1//0",0.977220786634,4.64926315225e-08]
["LNC_004612","XLOC_046305","lncRNA","Zm00001d049623_T002","Zm00001d049623",null,0.999966703578,0]
["LNC_004612","XLOC_046305","lncRNA","Zm00001d032655_T011","Zm00001d032655","sp|Q7XD96|DCL3B_ORYSJ Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica GN=DCL3B PE=3 SV=2//0",0.957591012077,1.00598881825e-06]
["LNC_004612","XLOC_046305","lncRNA","Zm00001d038082_T002","Zm00001d038082",null,0.994877614688,2.75359735014e-11]
["LNC_002560","XLOC_025354","lncRNA","Zm00001d017379_T001","Zm00001d017379","sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE=2 SV=1//1.94174e-66",0.970895773689,1.56619912373e-07]
["LNC_002560","XLOC_025354","lncRNA","Zm00001d028924_T001","Zm00001d028924","sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1//1.57508e-78",0.957173276119,1.05577295506E-6]
["LNC_002560","XLOC_025354","lncRNA","Zm00001d025848_T001","Zm00001d025848",null,0.953951820389,1.50899141604e-06]
["LNC_002560","XLOC_025354","lncRNA","Zm00001d004978_T001","Zm00001d004978",null,0.976592934408,5.32067698789e-08]
["LNC_001494","XLOC_014784","lncRNA","Zm00001d037114_T012","Zm00001d037114","sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=1 SV=1//7.81916e-06",0.9514586206,1.95590311636e-06]
["LNC_001493","XLOC_014768","lncRNA","Zm00001d029979_T002","Zm00001d029979","sp|Q8RY89|PI5K8_ARATH Phosphatidylinositol 4-phosphate 5-kinase 8 OS=Arabidopsis thaliana GN=PIP5K8 PE=1 SV=1//3.52405e-10",0.976551521272,5.36753825831e-08]
["LNC_001493","XLOC_014768","lncRNA","Zm00001d037100_T109","Zm00001d037100","sp|Q569Z2|XPO7B_XENLA Exportin-7-B OS=Xenopus laevis GN=xpo7-b PE=2 SV=1//2.85857e-21",0.976288873386,5.672452974e-08]
["LNC_002360","XLOC_023347","lncRNA","Zm00001d019898_T001","Zm00001d019898","sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1//5.54593e-07",0.952642547684,1.73221296174E-6]
["LNC_002360","XLOC_023347","lncRNA","Zm00001d016361_T001","Zm00001d016361","sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1//2.61168e-15",0.985860973126,4.34596625354e-09]
["LNC_002360","XLOC_023347","lncRNA","Zm00001d038491_T001","Zm00001d038491","sp|Q5KQI6|NSI_ORYSJ Probable acetyltransferase NSI OS=Oryza sativa subsp. japonica GN=NSI PE=2 SV=1//6.1675e-87",0.963655600426,4.69837325712e-07]
["LNC_003378","XLOC_033763","lncRNA","Zm00001d024152_T001","Zm00001d024152","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//1.00055e-13",0.99999383549,0]
["LNC_003378","XLOC_033763","lncRNA","Zm00001d051901_T006","Zm00001d051901","sp|B9F4I8|LPA1_ORYSJ P-loop NTPase domain-containing protein LPA1 OS=Oryza sativa subsp. japonica GN=LPA1 PE=2 SV=1//8.16221e-07",0.99999383549,0]
["LNC_003376","XLOC_033718","lncRNA","Zm00001d037214_T003","Zm00001d037214","sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3//1.27349e-09",0.951014569086,2.04547394378e-06]
["LNC_004369","XLOC_043850","lncRNA","Zm00001d029475_T001","Zm00001d029475",null,0.953565988753,1.5722484652E-6]
["LNC_004369","XLOC_043850","lncRNA","Zm00001d033109_T004","Zm00001d033109","sp|P38935|SMBP2_HUMAN DNA-binding protein SMUBP-2 OS=Homo sapiens GN=IGHMBP2 PE=1 SV=3//1.8859e-24",-0.950276671276,2.20148608683e-06]
["LNC_005740","XLOC_057506","lncRNA","Zm00001d042191_T002","Zm00001d042191","sp|Q8TB22|SPT20_HUMAN Spermatogenesis-associated protein 20 OS=Homo sapiens GN=SPATA20 PE=2 SV=3//2.65124e-150",0.959150793505,8.36313094332e-07]
["LNC_005741","XLOC_057507","lncRNA","Zm00001d041142_T018","Zm00001d041142","sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1//8.8303e-53",0.983640459399,8.9789926605e-09]
["LNC_005741","XLOC_057507","lncRNA","Zm00001d018523_T001","Zm00001d018523","sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A OS=Arabidopsis thaliana GN=RPN5A PE=1 SV=1//5.39249e-24",0.983749614179,8.68500338314e-09]
["LNC_006118","XLOC_060772","lncRNA","Zm00001d040656_T001","Zm00001d040656","sp|Q84WN3|SWT17_ARATH Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=2 SV=2//3.05267e-60",0.951022873087,2.04376961155e-06]
["LNC_006118","XLOC_060772","lncRNA","Zm00001d018069_T001","Zm00001d018069","sp|Q07300|ATPD_SORBI ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1//2.39401e-94",0.958701079333,8.82700970983e-07]
["LNC_001301","XLOC_012928","lncRNA","Zm00001d018959_T001","Zm00001d018959","sp|Q9M1H3|AB4F_ARATH ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1//2.65009e-07",0.973775866719,9.34715087553e-08]
["LNC_001301","XLOC_012928","lncRNA","Zm00001d050032_T001","Zm00001d050032","sp|P15280|GLGS_ORYSJ Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=AGPS PE=2 SV=4//0",0.952826801224,1.69930787197e-06]
["LNC_001301","XLOC_012928","lncRNA","Zm00001d007838_T001","Zm00001d007838","sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1//6.67497e-23",0.980033163444,2.41706978876E-8]
["LNC_001301","XLOC_012928","lncRNA","Zm00001d053901_T002","Zm00001d053901","sp|Q43768|SYE_HORVU Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Hordeum vulgare PE=2 SV=1//0",0.957053363869,1.07041896547E-6]
["LNC_001301","XLOC_012928","lncRNA","Zm00001d002001_T001","Zm00001d002001",null,0.965574667479,3.59384014326e-07]
["LNC_001301","XLOC_012928","lncRNA","Zm00001d019980_T002","Zm00001d019980",null,0.970610526449,1.64367869093e-07]
["LNC_001722","XLOC_016871","lncRNA","Zm00001d042117_T001","Zm00001d042117","sp|P17817|P5CR_SOYBN Pyrroline-5-carboxylate reductase OS=Glycine max PE=2 SV=1//4.95876e-78",0.959008174825,8.50809225517e-07]
["LNC_001722","XLOC_016871","lncRNA","Zm00001d014737_T001","Zm00001d014737","sp|Q9LMR3|TYRA2_ARATH Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1//5.23667e-104",0.954898216605,1.36235444059e-06]
["LNC_001722","XLOC_016871","lncRNA","Zm00001d052475_T001","Zm00001d052475","sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1//5.33451e-171",0.956703850799,1.11403077385e-06]
["LNC_006111","XLOC_060688","lncRNA","Zm00001d031379_T001","Zm00001d031379","sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2//0",0.960832736746,6.7967788997e-07]
["LNC_001724","XLOC_016935","lncRNA","Zm00001d018482_T004","Zm00001d018482","sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana GN=CHR4 PE=2 SV=1//1.40134e-11",0.968748550919,2.22764110269e-07]
["LNC_001724","XLOC_016935","lncRNA","Zm00001d035470_T012","Zm00001d035470","sp|Q4KKX4|NCOR1_XENTR Nuclear receptor corepressor 1 OS=Xenopus tropicalis GN=ncor1 PE=2 SV=1//9.32828e-16",-0.951373712598,1.97278483015E-6]
["LNC_002778","XLOC_027624","lncRNA","Zm00001d038855_T001","Zm00001d038855","sp|B4FHY0|FEN1_MAIZE Flap endonuclease 1 OS=Zea mays GN=FEN1 PE=2 SV=1//0",0.969380166991,2.01359041441e-07]
["LNC_002778","XLOC_027624","lncRNA","Zm00001d018733_T004","Zm00001d018733","sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1 SV=1//5.89757e-26",0.969269282555,2.04993143349E-7]
["LNC_002778","XLOC_027624","lncRNA","Zm00001d003087_T039","Zm00001d003087","sp|Q8RWY6|CLASP_ARATH CLIP-associated protein OS=Arabidopsis thaliana GN=CLASP PE=1 SV=1//0",0.969382509761,2.01282817081E-7]
["LNC_000527","XLOC_005849","lncRNA","Zm00001d002357_T005","Zm00001d002357","sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1//3.25485e-153",0.954541698351,1.41620131311E-6]
["LNC_005001","XLOC_050031","lncRNA","Zm00001d051065_T006","Zm00001d051065","sp|Q84L14|NCBP2_ORYSJ Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica GN=CBP20 PE=2 SV=1//2.59431e-08",0.955700118413,1.24716763428e-06]
["LNC_000523","XLOC_005768","lncRNA","Zm00001d046914_T001","Zm00001d046914","sp|Q9LTW9|FLA14_ARATH Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana GN=FLA14 PE=2 SV=1//7.5227e-27",0.951367242139,1.97407603331e-06]
["LNC_001031","XLOC_010426","lncRNA","Zm00001d031696_T001","Zm00001d031696","sp|O22870|FK163_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-3 PE=1 SV=2//8.46631e-73",0.95149901366,1.9479123512e-06]
["LNC_001994","XLOC_019571","lncRNA","Zm00001d029955_T001","Zm00001d029955","sp|O23522|PLA14_ARATH Phospholipase A1-Ibeta2, chloroplastic OS=Arabidopsis thaliana GN=At4g16820 PE=1 SV=2//2.89219e-117",0.980252123774,2.28825571824E-8]
["LNC_004216","XLOC_042428","lncRNA","Zm00001d009339_T001","Zm00001d009339","sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1//2.58444e-25",0.963476538611,4.81380220574e-07]
["LNC_004216","XLOC_042428","lncRNA","Zm00001d006614_T003","Zm00001d006614","sp|Q8H4S6|P2C64_ORYSJ Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2//0",-0.959858705657,7.6723436874e-07]
["LNC_003959","XLOC_040228","lncRNA","Zm00001d019312_T003","Zm00001d019312","sp|Q5U9T2|LECH_HORVU Horcolin OS=Hordeum vulgare PE=3 SV=1//1.19431e-22",0.951481457071,1.95138229908e-06]
["LNC_003954","XLOC_040192","lncRNA","Zm00001d025081_T004","Zm00001d025081","sp|Q39129|STR16_ARATH Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2//1.3002e-28",0.953532371219,1.57785813704e-06]
["LNC_003950","XLOC_040135","lncRNA","Zm00001d007954_T001","Zm00001d007954","sp|Q8GXD9|SCO3_ARATH Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana GN=SCO3 PE=1 SV=1//1.43394e-10",0.982712466311,1.18130287774E-8]
["LNC_004284","XLOC_043394","lncRNA","Zm00001d050125_T012","Zm00001d050125","sp|Q6ZHZ1|SPSA4_ORYSJ Probable sucrose-phosphate synthase 4 OS=Oryza sativa subsp. japonica GN=SPS4 PE=2 SV=1//8.27348e-42",0.961502730658,6.24207324051e-07]
["LNC_004282","XLOC_043335","lncRNA","Zm00001d053036_T002","Zm00001d053036",null,0.982483249718,1.26123711475E-8]
["LNC_004283","XLOC_043362","lncRNA","Zm00001d042724_T005","Zm00001d042724","sp|Q8LJA9|TLP3_ORYSJ Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1//0",0.960986157311,6.66643078961e-07]
["LNC_001411","XLOC_014210","lncRNA","Zm00001d043146_T002","Zm00001d043146",null,0.981369131641,1.71349374689E-8]
["LNC_001411","XLOC_014210","lncRNA","Zm00001d021416_T001","Zm00001d021416",null,0.973742360287,9.40648710035e-08]
["LNC_001411","XLOC_014210","lncRNA","Zm00001d018030_T003","Zm00001d018030",null,0.983009410522,1.08381372765e-08]
["LNC_001411","XLOC_014210","lncRNA","Zm00001d040570_T001","Zm00001d040570",null,0.991487264678,3.47075923557e-10]
["LNC_001411","XLOC_014210","lncRNA","Zm00001d008559_T002","Zm00001d008559","sp|Q9M5P4|CRS2_MAIZE Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1//0",0.969981983036,1.8251885292e-07]
["LNC_002600","XLOC_025634","lncRNA","Zm00001d009753_T015","Zm00001d009753","sp|Q8LQJ8|FTSH5_ORYSJ ATP-dependent zinc metalloprotease FTSH 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1//0",0.970104093237,1.78873413414e-07]
["LNC_002600","XLOC_025634","lncRNA","Zm00001d009999_T001","Zm00001d009999","sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana GN=BHLH41 PE=3 SV=1//4.25528e-06",0.963146546764,5.03242486349e-07]
["LNC_005131","XLOC_051518","lncRNA","Zm00001d001603_T001","Zm00001d001603",null,0.965763394739,3.49751774209e-07]
["LNC_002609","XLOC_025704","lncRNA","Zm00001d010321_T029","Zm00001d010321","sp|Q42368|PPDK2_MAIZE Pyruvate, phosphate dikinase 2 OS=Zea mays GN=PPDK2 PE=1 SV=2//0",0.974119020743,8.75644712295e-08]
["LNC_005135","XLOC_051574","lncRNA","Zm00001d004362_T001","Zm00001d004362",null,0.952227623945,1.80816468132e-06]
["LNC_004359","XLOC_043833","lncRNA","Zm00001d043274_T009","Zm00001d043274","sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1//3.88156e-11",0.966427294398,3.17486295032e-07]
["LNC_004359","XLOC_043833","lncRNA","Zm00001d040831_T021","Zm00001d040831","sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa subsp. japonica GN=Os01g0367900 PE=2 SV=2//0",0.952635447532,1.73349098764e-06]
["LNC_005253","XLOC_052569","lncRNA","Zm00001d002683_T001","Zm00001d002683",null,0.958596722533,8.9375186052e-07]
["LNC_004352","XLOC_043833","lncRNA","Zm00001d002937_T033","Zm00001d002937","sp|Q9LUC5|C7A15_ARATH Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1//3.21086e-153",0.951810502238,1.88715790461E-6]
["LNC_004352","XLOC_043833","lncRNA","Zm00001d034633_T047","Zm00001d034633",null,0.9635342365,4.77636491247e-07]
["LNC_002917","XLOC_028860","lncRNA","Zm00001d016826_T001","Zm00001d016826",null,0.968048797141,2.48552322724e-07]
["LNC_002917","XLOC_028860","lncRNA","Zm00001d047220_T001","Zm00001d047220","sp|Q75LR7|SAPK1_ORYSJ Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1//0",0.973807390427,9.29159840179e-08]
["LNC_002917","XLOC_028860","lncRNA","Zm00001d042697_T002","Zm00001d042697","sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea GN=PSBS PE=1 SV=1//3.79799e-89",0.965868369436,3.44483649606e-07]
["LNC_002917","XLOC_028860","lncRNA","Zm00001d043556_T001","Zm00001d043556","sp|Q680H3|PP170_ARATH Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana GN=PCMP-H75 PE=2 SV=2//5.48822e-133",0.953188217025,1.63620497995E-6]
["LNC_002917","XLOC_028860","lncRNA","Zm00001d020971_T001","Zm00001d020971","sp|Q41822|IOJAP_MAIZE Protein Iojap, chloroplast OS=Zea mays GN=Ij PE=1 SV=1//5.34461e-126",0.97505528765,7.29459552762e-08]
["LNC_002912","XLOC_028845","lncRNA","Zm00001d019479_T005","Zm00001d019479","sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1//4.5694e-50",0.951763428381,1.89624171565e-06]
["LNC_002918","XLOC_028860","lncRNA","Zm00001d043526_T004","Zm00001d043526","sp|B8ETG9|YBEY_METSB Endoribonuclease YbeY OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=ybeY PE=3 SV=1//1.27587e-15",0.959337862849,8.17597046288e-07]
["LNC_002919","XLOC_028866","lncRNA","Zm00001d038027_T002","Zm00001d038027",null,0.955956782841,1.21198189085e-06]
["LNC_002919","XLOC_028866","lncRNA","Zm00001d037425_T001","Zm00001d037425","sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana GN=AHL10 PE=1 SV=2//1.17175e-56",0.954458883454,1.42894770216e-06]
["LNC_002919","XLOC_028866","lncRNA","Zm00001d002822_T001","Zm00001d002822","sp|I1K0K6|EFGC2_SOYBN Elongation factor G-2, chloroplastic OS=Glycine max GN=fusA2 PE=3 SV=1//0",0.971535147256,1.40306990026E-7]
["LNC_001937","XLOC_018984","lncRNA","Zm00001d021444_T001","Zm00001d021444","sp|Q9LMA1|FMO1_ARATH Probable flavin-containing monooxygenase 1 OS=Arabidopsis thaliana GN=FMO1 PE=2 SV=1//1.85254e-122",0.971903794312,1.31535417003E-7]
["LNC_001937","XLOC_018984","lncRNA","Zm00001d047255_T001","Zm00001d047255","sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1//0",0.966766634785,3.01935137337E-7]
["LNC_001937","XLOC_018984","lncRNA","Zm00001d015031_T001","Zm00001d015031",null,0.950770187634,2.09613831958e-06]
["LNC_001937","XLOC_018984","lncRNA","Zm00001d013741_T007","Zm00001d013741","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//3.51416e-154",0.99106787066,4.41112479876e-10]
["LNC_001937","XLOC_018984","lncRNA","Zm00001d011166_T001","Zm00001d011166",null,0.96746486956,2.71842037325e-07]
["LNC_001937","XLOC_018984","lncRNA","Zm00001d053545_T003","Zm00001d053545","sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9E9.15 PE=3 SV=2//3.22165e-09",0.991288490135,3.89404952728e-10]
["LNC_001933","XLOC_018951","lncRNA","Zm00001d015004_T002","Zm00001d015004","sp|Q8H0W0|LPA3_ARATH Protein LOW PSII ACCUMULATION 3, chloroplastic OS=Arabidopsis thaliana GN=LPA3 PE=1 SV=1//6.93852e-149",0.96983943793,1.86848888584e-07]
["LNC_001933","XLOC_018951","lncRNA","Zm00001d018066_T001","Zm00001d018066",null,0.963212110052,4.98837255503e-07]
["LNC_004219","XLOC_042453","lncRNA","Zm00001d008295_T002","Zm00001d008295","sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2//9.68896e-119",0.971774631175,1.3455751624e-07]
["LNC_004035","XLOC_040966","lncRNA","Zm00001d042148_T001","Zm00001d042148","sp|Q5JLP4|CKX4_ORYSJ Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4 PE=2 SV=1//0",0.951373651945,1.9727969307E-6]
["LNC_000047","XLOC_000663","lncRNA","Zm00001d033061_T002","Zm00001d033061","sp|Q9LYT3|TT12_ARATH Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1//7.50262e-138",0.968094197059,2.46810380578e-07]
["LNC_003774","XLOC_038413","lncRNA","Zm00001d010974_T063","Zm00001d010974","sp|Q6L4L4|SIZ1_ORYSJ E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1//1.32393e-13",0.953720212982,1.546715934e-06]
["LNC_004218","XLOC_042444","lncRNA","Zm00001d030995_T006","Zm00001d030995","sp|P12959|OP2_MAIZE Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1//2.29438e-09",0.962485109429,5.49438575526e-07]
["LNC_004218","XLOC_042444","lncRNA","Zm00001d006520_T001","Zm00001d006520","sp|Q195N6|PDRP1_MAIZE Pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Zea mays GN=PDRP1 PE=1 SV=1//0",0.97725670496,4.61300229126e-08]
["LNC_004218","XLOC_042444","lncRNA","Zm00001d053202_T001","Zm00001d053202","sp|Q9ZNR0|C78A6_ARATH Cytochrome P450 78A6 OS=Arabidopsis thaliana GN=CYP78A6 PE=2 SV=1//0",0.96232818184,5.60877990496e-07]
["LNC_004218","XLOC_042444","lncRNA","Zm00001d040090_T001","Zm00001d040090","sp|Q7Y0V9|ROC4_ORYSJ Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2//0",0.958035558511,9.55075856623e-07]
["LNC_004218","XLOC_042444","lncRNA","Zm00001d013937_T001","Zm00001d013937","sp|Q42850|PORB_HORVU Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1//0",0.967213019061,2.82407617958e-07]
["LNC_000287","XLOC_002909","lncRNA","Zm00001d021793_T003","Zm00001d021793","sp|C0LGK4|Y2165_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=2 SV=1//1.08342e-56",0.956001481402,1.20593564779e-06]
["LNC_004988","XLOC_049904","lncRNA","Zm00001d047463_T001","Zm00001d047463","sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=2 SV=2//3.02223e-18",-0.955520211744,1.27231048192e-06]
["LNC_004988","XLOC_049904","lncRNA","Zm00001d020437_T001","Zm00001d020437","sp|Q9XI84|RBCMT_ARATH [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1//0",-0.962999647644,5.13225012661e-07]
["LNC_003411","XLOC_034065","lncRNA","Zm00001d051851_T004","Zm00001d051851","sp|Q0J9V5|CXXS1_ORYSJ Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 PE=2 SV=1//1.57678e-13",0.954372931948,1.44227297172e-06]
["LNC_004721","XLOC_047246","lncRNA","Zm00001d020921_T001","Zm00001d020921","sp|Q8LG88|TDT_ARATH Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2//0",0.956318716149,1.16370887593e-06]
["LNC_004726","XLOC_047332","lncRNA","Zm00001d025830_T062","Zm00001d025830","sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 PE=2 SV=1//0",0.99989978035,0]
["LNC_004726","XLOC_047332","lncRNA","Zm00001d022305_T002","Zm00001d022305","sp|Q10KY3|CAMK1_ORYSJ Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica GN=CAMK1 PE=1 SV=1//3.68333e-48",1,0]
["LNC_000198","XLOC_002061","lncRNA","Zm00001d047581_T002","Zm00001d047581","sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1//3.25503e-176",0.964545117125,4.15712480439e-07]
["LNC_000198","XLOC_002061","lncRNA","Zm00001d020357_T003","Zm00001d020357","sp|Q6H601|RH22_ORYSJ DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 PE=2 SV=2//4.18618e-103",0.97554639109,6.60970946864e-08]
["LNC_000196","XLOC_002051","lncRNA","Zm00001d010466_T001","Zm00001d010466",null,0.95339560426,1.60084405376e-06]
["LNC_000196","XLOC_002051","lncRNA","Zm00001d044516_T006","Zm00001d044516","sp|P37707|B2_DAUCA B2 protein OS=Daucus carota PE=2 SV=1//5.92753e-09",0.967272573908,2.79880197462E-7]
["LNC_000196","XLOC_002051","lncRNA","Zm00001d021738_T001","Zm00001d021738",null,0.959863182796,7.66812409125e-07]
["LNC_000196","XLOC_002051","lncRNA","Zm00001d011796_T010","Zm00001d011796","sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1//7.64308e-18",0.961318724367,6.39069366315e-07]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d044691_T001","Zm00001d044691",null,-0.954607243644,1.40617707501E-6]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d026490_T012","Zm00001d026490","sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1//0",-0.951670371159,1.91430094876E-6]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d038653_T001","Zm00001d038653","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//3.98983e-27",0.956135544898,1.18794474813e-06]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d024317_T001","Zm00001d024317","sp|Q9LIS1|CR26L_ARATH Protein ECERIFERUM 26-like OS=Arabidopsis thaliana GN=CER26L PE=2 SV=1//1.14473e-33",0.974568066304,8.02877990758e-08]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d035491_T002","Zm00001d035491","sp|Q9FKK6|EXO5_ARATH Exonuclease V, chloroplastic OS=Arabidopsis thaliana GN=At5g60370 PE=2 SV=1//1.66697e-30",0.953934245717,1.51182813801e-06]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d020030_T001","Zm00001d020030",null,0.986410524322,3.56781360011e-09]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d033563_T001","Zm00001d033563","sp|P0CB23|Y4862_ARATH Uncharacterized protein At4g38062 OS=Arabidopsis thaliana GN=At4g38062 PE=4 SV=1//1.20076e-56",-0.966490439535,3.14545318173E-7]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d019593_T001","Zm00001d019593","sp|Q8L9J9|CAES_ARATH Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2//7.33709e-77",-0.971097102945,1.51328565663e-07]
["LNC_000191","XLOC_002022","lncRNA","Zm00001d039335_T001","Zm00001d039335",null,-0.969308116429,2.03714521955e-07]
["LNC_000192","XLOC_002027","lncRNA","Zm00001d003715_T001","Zm00001d003715","sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1//1.11909e-79",0.966790047084,3.0088498626e-07]
["LNC_002174","XLOC_021668","lncRNA","Zm00001d026306_T001","Zm00001d026306","sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=2 SV=2//1.89071e-140",0.964194982214,4.36390552583e-07]
["LNC_002174","XLOC_021668","lncRNA","Zm00001d005920_T001","Zm00001d005920","sp|Q94CE3|BCA5_ARATH Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana GN=BCA5 PE=2 SV=1//7.6814e-94",0.995096373043,2.21453966276E-11]
["LNC_002174","XLOC_021668","lncRNA","Zm00001d004091_T002","Zm00001d004091","sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2 SV=1//3.00295e-29",0.970877092662,1.57118256627e-07]
["LNC_002175","XLOC_021668","lncRNA","Zm00001d003710_T007","Zm00001d003710","sp|Q3ECY6|SDG41_ARATH Protein SET DOMAIN GROUP 41 OS=Arabidopsis thaliana GN=SDG41 PE=2 SV=1//1.14732e-24",0.979129939691,3.01094278399e-08]
["LNC_002175","XLOC_021668","lncRNA","Zm00001d047655_T002","Zm00001d047655",null,0.979264505037,2.91577624267E-8]
["LNC_002171","XLOC_021638","lncRNA","Zm00001d012552_T002","Zm00001d012552","sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1//0",0.982015615315,1.4376930757E-8]
["LNC_002178","XLOC_021726","lncRNA","Zm00001d039173_T007","Zm00001d039173","sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1 OS=Arabidopsis thaliana GN=HIR1 PE=1 SV=1//1.58338e-161",0.95141326963,1.96490564064E-6]
["LNC_000227","XLOC_002285","lncRNA","Zm00001d014135_T001","Zm00001d014135",null,0.977161647762,4.70946062148e-08]
["LNC_003567","XLOC_035923","lncRNA","Zm00001d011747_T001","Zm00001d011747","sp|P93013|AGP30_ARATH Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana GN=AGP30 PE=2 SV=1//1.49983e-08",0.959443644977,8.07161908201e-07]
["LNC_003567","XLOC_035923","lncRNA","Zm00001d031677_T001","Zm00001d031677",null,0.987340072356,2.50738452223e-09]
["LNC_004619","XLOC_046344","lncRNA","Zm00001d052308_T053","Zm00001d052308","sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=3 SV=1//4.26481e-32",0.990675052707,5.46664491452e-10]
["LNC_004619","XLOC_046344","lncRNA","Zm00001d012765_T001","Zm00001d012765","sp|Q9M1S8|GCP2_ARATH Probable glutamate carboxypeptidase 2 OS=Arabidopsis thaliana GN=AMP1 PE=1 SV=3//6.1181e-13",0.999723293807,0]
["LNC_002639","XLOC_026064","lncRNA","Zm00001d022505_T006","Zm00001d022505","sp|P11428|SODC2_MAIZE Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2//8.14685e-95",0.982766674446,1.16300351571E-8]
["LNC_005744","XLOC_057545","lncRNA","Zm00001d034298_T004","Zm00001d034298","sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1//1.81451e-32",0.963444727108,4.83454263733e-07]
["LNC_001557","XLOC_015094","lncRNA","Zm00001d016407_T001","Zm00001d016407","sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3//2.08827e-19",0.954643857437,1.40060207077E-6]
["LNC_006273","XLOC_062224","lncRNA","Zm00001d014887_T004","Zm00001d014887","sp|Q39085|DIM_ARATH Delta(24)-sterol reductase OS=Arabidopsis thaliana GN=DIM PE=1 SV=2//0",0.951359241115,1.97567359339E-6]
["LNC_002284","XLOC_022610","lncRNA","Zm00001d008397_T001","Zm00001d008397",null,0.975824859034,6.24476470534e-08]
["LNC_002284","XLOC_022610","lncRNA","Zm00001d049343_T003","Zm00001d049343","sp|Q9LU39|GLUBP_ARATH Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana GN=GLUTRBP PE=1 SV=1//2.28627e-07",0.980017188112,2.42668956041e-08]
["LNC_002284","XLOC_022610","lncRNA","Zm00001d013845_T012","Zm00001d013845","sp|Q4KMJ1|CHAC2_DANRE Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Danio rerio GN=chac2 PE=2 SV=1//3.12404e-34",0.968674309914,2.25394479081e-07]
["LNC_002284","XLOC_022610","lncRNA","Zm00001d038884_T001","Zm00001d038884","sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2//3.04806e-26",-0.95206046131,1.83949997328E-6]
["LNC_002283","XLOC_022603","lncRNA","Zm00001d013619_T001","Zm00001d013619","sp|O64538|SAU40_ARATH Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1//1.48744e-09",0.956645404895,1.12145923215e-06]
["LNC_006072","XLOC_060349","lncRNA","Zm00001d000719_T001","Zm00001d000719",null,0.96055003733,7.04226334136e-07]
["LNC_006079","XLOC_060424","lncRNA","Zm00001d043702_T001","Zm00001d043702",null,0.969996187117,1.82091795864e-07]
["LNC_006078","XLOC_060396","lncRNA","Zm00001d010755_T012","Zm00001d010755","sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1//4.41187e-07",0.974655496762,7.89287923908e-08]
["LNC_002637","XLOC_026040","lncRNA","Zm00001d047830_T002","Zm00001d047830","sp|Q9AXH9|KAO1_HORVU Ent-kaurenoic acid oxidase 1 OS=Hordeum vulgare GN=KAO1 PE=1 SV=1//4.30028e-27",0.952007444391,1.84952765414e-06]
["LNC_004501","XLOC_045019","lncRNA","Zm00001d044925_T001","Zm00001d044925","sp|O22914|CP121_ARATH Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana GN=CP12-1 PE=1 SV=1//1.14724e-24",0.959790658999,7.73670340681e-07]
["LNC_000865","XLOC_008896","lncRNA","Zm00001d039631_T003","Zm00001d039631","sp|Q8GU87|AB31G_ORYSJ ABC transporter G family member 31 OS=Oryza sativa subsp. japonica GN=ABCG31 PE=2 SV=3//0",0.950997085463,2.04906600731e-06]
["LNC_000736","XLOC_007594","lncRNA","Zm00001d018484_T010","Zm00001d018484","sp|Q9SJW6|ARC1B_ARATH Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana GN=ARPC1B PE=2 SV=1//1.98727e-13",0.962322221419,5.61316183312E-7]
["LNC_000738","XLOC_007612","lncRNA","Zm00001d040462_T003","Zm00001d040462","sp|Q8W207|CSN2_ARATH COP9 signalosome complex subunit 2 OS=Arabidopsis thaliana GN=CSN2 PE=1 SV=1//0",0.973254588154,1.03047825384E-7]
["LNC_000738","XLOC_007612","lncRNA","Zm00001d016865_T001","Zm00001d016865","sp|O80792|RH33_ARATH Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana GN=RH33 PE=3 SV=1//2.46194e-17",0.950888886106,2.07140733677e-06]
["LNC_000738","XLOC_007612","lncRNA","Zm00001d007366_T003","Zm00001d007366","sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 OS=Arabidopsis thaliana GN=At3g48420 PE=1 SV=1//2.18435e-133",0.988800267125,1.36196165457E-9]
["LNC_000738","XLOC_007612","lncRNA","Zm00001d002421_T001","Zm00001d002421","sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1//2.77509e-37",0.956126362944,1.18917009817e-06]
["LNC_000738","XLOC_007612","lncRNA","Zm00001d002700_T001","Zm00001d002700",null,0.972709898169,1.13872749896e-07]
["LNC_000738","XLOC_007612","lncRNA","Zm00001d042908_T001","Zm00001d042908","sp|Q6NQJ6|RNR1_ARATH Ribonuclease II, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=RNR1 PE=2 SV=1//0",0.951033556907,2.04157849715e-06]
["LNC_002596","XLOC_025589","lncRNA","Zm00001d044052_T001","Zm00001d044052","sp|A2ZW16|PLA1_ORYSJ Phospholipase A1-II 1 OS=Oryza sativa subsp. japonica GN=Os01g0651100 PE=3 SV=2//0",0.962302505986,5.62767543233e-07]
["LNC_002596","XLOC_025589","lncRNA","Zm00001d044317_T001","Zm00001d044317",null,0.973256675079,1.03007989694E-7]
["LNC_002596","XLOC_025589","lncRNA","Zm00001d021741_T010","Zm00001d021741","sp|B9FXV5|IF4G_ORYSJ Eukaryotic translation initiation factor 4G OS=Oryza sativa subsp. japonica GN=Os07g0555200 PE=2 SV=2//0",0.969907642856,1.84766972833E-7]
["LNC_004865","XLOC_048857","lncRNA","Zm00001d050130_T003","Zm00001d050130","sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2//6.98846e-64",0.982870036916,1.12873763669E-8]
["LNC_004865","XLOC_048857","lncRNA","Zm00001d047536_T007","Zm00001d047536",null,-0.967910904589,2.53903153895e-07]
["LNC_006202","XLOC_061745","lncRNA","Zm00001d005995_T008","Zm00001d005995","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//4.77107e-162",0.978299619225,3.65438954653e-08]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d047522_T002","Zm00001d047522","sp|P93026|VSR1_ARATH Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2//0",-0.952130212664,1.82637286979E-6]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d011779_T009","Zm00001d011779","sp|P43293|NAK_ARATH Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=1 SV=2//7.5137e-159",0.957031013257,1.07316660269E-6]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d034350_T001","Zm00001d034350",null,0.973234158092,1.03438445365E-7]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d025711_T001","Zm00001d025711",null,0.961866752487,5.95614932042e-07]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d007940_T002","Zm00001d007940","sp|P56333|IF5A1_SOLTU Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1//2.00172e-97",0.966005664532,3.37688984109e-07]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d002828_T001","Zm00001d002828","sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=1 SV=2//3.02158e-99",-0.96236164402,5.58422993414e-07]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d040409_T001","Zm00001d040409",null,0.967549346886,2.6836938849E-7]
["LNC_003180","XLOC_031663","lncRNA","Zm00001d014035_T001","Zm00001d014035","sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1//2.66852e-10",0.979834471816,2.53890213298e-08]
["LNC_003187","XLOC_031734","lncRNA","Zm00001d018598_T001","Zm00001d018598","sp|Q69LA1|PROT2_ORYSJ Probable proline transporter 2 OS=Oryza sativa subsp. japonica GN=LOC_Os07g01090 PE=2 SV=1//0",0.951243320237,1.99893472708e-06]
["LNC_003187","XLOC_031734","lncRNA","Zm00001d046354_T001","Zm00001d046354","sp|Q5HZ36|GAT21_ARATH GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2//3.97688e-17",0.978467933154,3.51584326097e-08]
["LNC_003187","XLOC_031734","lncRNA","Zm00001d011166_T001","Zm00001d011166",null,0.951607815462,1.92651735764e-06]
["LNC_001488","XLOC_014754","lncRNA","Zm00001d048540_T004","Zm00001d048540","sp|Q75RY2|PAIR1_ORYSJ Protein PAIR1 OS=Oryza sativa subsp. japonica GN=PAIR1 PE=1 SV=1//1.11951e-07",0.982779332807,1.15876308548E-8]
["LNC_005040","XLOC_050515","lncRNA","Zm00001d034388_T006","Zm00001d034388","sp|O23888|ALDO2_MAIZE Indole-3-acetaldehyde oxidase OS=Zea mays GN=AO2 PE=2 SV=1//1.09134e-11",0.979545491703,2.7247858192E-8]
["LNC_005816","XLOC_058062","lncRNA","Zm00001d039076_T003","Zm00001d039076",null,0.952755235102,1.71202913246E-6]
["LNC_005816","XLOC_058062","lncRNA","Zm00001d043147_T002","Zm00001d043147","sp|P37339|LHGO_ECOLI L-2-hydroxyglutarate oxidase LhgO OS=Escherichia coli (strain K12) GN=lhgO PE=1 SV=3//1.5767e-10",0.954425070371,1.43417811627E-6]
["LNC_005810","XLOC_058010","lncRNA","Zm00001d021231_T004","Zm00001d021231","sp|Q9LYP1|RBL3_ARATH RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1//1.86857e-10",0.952374935062,1.78090302017e-06]
["LNC_000605","XLOC_006550","lncRNA","Zm00001d046438_T003","Zm00001d046438","sp|Q69VD5|PNH1_ORYSJ Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1//0",0.988817785777,1.35138256141E-9]
["LNC_000605","XLOC_006550","lncRNA","Zm00001d018481_T019","Zm00001d018481","sp|Q9LKB9|MYO6_ARATH Myosin-6 OS=Arabidopsis thaliana GN=XI-2 PE=1 SV=1//3.09625e-134",0.987080242187,2.77426348561e-09]
["LNC_000605","XLOC_006550","lncRNA","Zm00001d050718_T001","Zm00001d050718",null,0.988817785777,1.35138256141E-9]
["LNC_005047","XLOC_050563","lncRNA","Zm00001d038101_T002","Zm00001d038101",null,0.961750687806,6.04615834732E-7]
["LNC_005047","XLOC_050563","lncRNA","Zm00001d036107_T001","Zm00001d036107","sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1//1.33139e-91",0.969759886951,1.89300676912E-7]
["LNC_001739","XLOC_017158","lncRNA","Zm00001d024463_T011","Zm00001d024463","sp|A8C754|THADA_CHICK Thyroid adenoma-associated protein homolog OS=Gallus gallus GN=THADA PE=2 SV=1//4.58056e-48",0.975836987958,6.22924218874e-08]
["LNC_001737","XLOC_017125","lncRNA","Zm00001d031833_T001","Zm00001d031833","sp|Q9SJY5|PUMP5_ARATH Mitochondrial uncoupling protein 5 OS=Arabidopsis thaliana GN=PUMP5 PE=2 SV=1//3.17263e-125",0.983164579341,1.03548858377E-8]
["LNC_001737","XLOC_017125","lncRNA","Zm00001d051824_T001","Zm00001d051824","sp|Q851W1|SLY1_ORYSJ SEC1 family transport protein SLY1 OS=Oryza sativa subsp. japonica GN=SLY1 PE=2 SV=1//0",0.973323086963,1.01746701064E-7]
["LNC_001737","XLOC_017125","lncRNA","Zm00001d032453_T001","Zm00001d032453","sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1//8.75417e-08",0.961645759133,6.12845852288e-07]
["LNC_001734","XLOC_017091","lncRNA","Zm00001d051740_T003","Zm00001d051740","sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic OS=Arabidopsis thaliana GN=SPPA PE=2 SV=1//8.29522e-48",-0.958569568546,8.96645275931E-7]
["LNC_000608","XLOC_006559","lncRNA","Zm00001d043165_T002","Zm00001d043165","sp|O64733|U87A2_ARATH UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=1 SV=1//3.24618e-38",0.960611706095,6.98812144817e-07]
["LNC_001730","XLOC_017051","lncRNA","Zm00001d016956_T011","Zm00001d016956","sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1//4.81609e-35",0.988683973464,1.43387679508e-09]
["LNC_001730","XLOC_017051","lncRNA","Zm00001d004993_T001","Zm00001d004993",null,0.963370113454,4.88346794558e-07]
["LNC_004368","XLOC_043850","lncRNA","Zm00001d003569_T001","Zm00001d003569","sp|O80580|MLO15_ARATH MLO-like protein 15 OS=Arabidopsis thaliana GN=MLO15 PE=2 SV=1//5.0802e-131",0.970907543996,1.56306568577E-7]
["LNC_004368","XLOC_043850","lncRNA","Zm00001d012763_T004","Zm00001d012763","sp|Q8W1Y3|KP1_ARATH Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2//5.93237e-94",0.960380041521,7.19323806742e-07]
["LNC_004368","XLOC_043850","lncRNA","Zm00001d035605_T001","Zm00001d035605","sp|Q4JL76|MYBA2_ORYSJ Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1//2.32326e-50",0.958875681071,8.64454383853e-07]
["LNC_002510","XLOC_025016","lncRNA","Zm00001d027450_T005","Zm00001d027450","sp|O23702|CTBP_ARATH C-terminal binding protein AN OS=Arabidopsis thaliana GN=AN PE=1 SV=1//7.11995e-10",0.95738541967,1.03025192422e-06]
["LNC_001021","XLOC_010373","lncRNA","Zm00001d051740_T002","Zm00001d051740","sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic OS=Arabidopsis thaliana GN=SPPA PE=2 SV=1//8.29522e-48",0.957480471394,1.01897726124e-06]
["LNC_001021","XLOC_010373","lncRNA","Zm00001d032127_T004","Zm00001d032127","sp|Q9LYR5|FKB19_ARATH Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1//1.9127e-82",0.958676188743,8.85326855826e-07]
["LNC_001021","XLOC_010373","lncRNA","Zm00001d029249_T001","Zm00001d029249",null,0.982924023643,1.11116340573E-8]
["LNC_001021","XLOC_010373","lncRNA","Zm00001d052411_T002","Zm00001d052411","sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1//3.04613e-07",-0.972955773354,1.08879643721E-7]
["LNC_001021","XLOC_010373","lncRNA","Zm00001d009248_T004","Zm00001d009248","sp|Q5ZAJ0|RBOHB_ORYSJ Respiratory burst oxidase homolog protein B OS=Oryza sativa subsp. japonica GN=RBOHB PE=1 SV=1//0",-0.956036340095,1.20123705373E-6]
["LNC_001028","XLOC_010402","lncRNA","Zm00001d034013_T010","Zm00001d034013","sp|Q8VHK9|DHX36_MOUSE ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36 PE=1 SV=2//0",0.952138199817,1.82487445399e-06]
["LNC_003961","XLOC_040240","lncRNA","Zm00001d003297_T001","Zm00001d003297","sp|Q9C9V6|Y1790_ARATH BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana GN=At1g67900 PE=1 SV=1//4.27321e-139",0.973861892971,9.1961720905e-08]
["LNC_003961","XLOC_040240","lncRNA","Zm00001d051140_T001","Zm00001d051140","sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1//7.44367e-54",0.972956623653,1.08862684201E-7]
["LNC_003965","XLOC_040264","lncRNA","Zm00001d018719_T001","Zm00001d018719",null,0.953253616366,1.62498772371e-06]
["LNC_003965","XLOC_040264","lncRNA","Zm00001d048268_T001","Zm00001d048268",null,0.954269570134,1.45842780075E-6]
["LNC_003965","XLOC_040264","lncRNA","Zm00001d039946_T001","Zm00001d039946","sp|O74717|XYN2_CLAPU Endo-1,4-beta-xylanase 2 OS=Claviceps purpurea GN=xyl2 PE=2 SV=1//4.9315e-31",0.95364936329,1.55840424143e-06]
["LNC_003965","XLOC_040264","lncRNA","Zm00001d015846_T001","Zm00001d015846","sp|Q9SX27|PAN_ARATH Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1 SV=1//1.22237e-14",0.975077623915,7.26226785375e-08]
["LNC_004294","XLOC_043457","lncRNA","Zm00001d040060_T001","Zm00001d040060",null,0.950821251565,2.0854705467e-06]
["LNC_001129","XLOC_011331","lncRNA","Zm00001d017037_T001","Zm00001d017037",null,0.967447232652,2.72571535564e-07]
["LNC_000469","XLOC_005108","lncRNA","Zm00001d051252_T001","Zm00001d051252","sp|P08823|RUBA_WHEAT RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1//5.16528e-63",0.952934979668,1.6802210463e-06]
["LNC_005952","XLOC_059540","lncRNA","Zm00001d018145_T001","Zm00001d018145","sp|Q9LJL3|PREP1_ARATH Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PREP1 PE=1 SV=2//0",0.977711766419,4.17279668596e-08]
["LNC_005952","XLOC_059540","lncRNA","Zm00001d014814_T002","Zm00001d014814","sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1 SV=1//2.73276e-51",-0.954331883028,1.44867157959e-06]
["LNC_005952","XLOC_059540","lncRNA","Zm00001d040416_T004","Zm00001d040416","sp|Q5NBJ3|GYRB_ORYSJ DNA gyrase subunit B, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=GYRB PE=2 SV=1//1.39301e-60",0.956134496778,1.18808457117e-06]
["LNC_005790","XLOC_057877","lncRNA","Zm00001d025152_T001","Zm00001d025152","sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1//2.94842e-14",0.981527824028,1.6421884963e-08]
["LNC_005790","XLOC_057877","lncRNA","Zm00001d002129_T003","Zm00001d002129","sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=2 SV=1//2.12546e-13",0.958046603289,9.53837510753E-7]
["LNC_005790","XLOC_057877","lncRNA","Zm00001d022110_T001","Zm00001d022110","sp|B8B8C5|ALFL9_ORYSI PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 SV=1//4.41017e-22",0.976646520512,5.26052574834e-08]
["LNC_005790","XLOC_057877","lncRNA","Zm00001d003612_T001","Zm00001d003612","sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1//1.81506e-27",0.96389534428,4.54728338317e-07]
["LNC_005249","XLOC_052519","lncRNA","Zm00001d028360_T002","Zm00001d028360","sp|Q7G764|NADO1_ORYSJ Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1//3.94036e-143",0.966452954397,3.16288557567e-07]
["LNC_004348","XLOC_043829","lncRNA","Zm00001d014436_T014","Zm00001d014436","sp|Q8GYA6|PS13B_ARATH 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana GN=RPN9B PE=1 SV=1//1.02823e-11",0.985381742301,5.13000775193e-09]
["LNC_004348","XLOC_043829","lncRNA","Zm00001d012697_T009","Zm00001d012697","sp|Q5JLQ9|CIPKU_ORYSJ CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1//5.25107e-178",0.984884618767,6.05861849579e-09]
["LNC_004345","XLOC_043808","lncRNA","Zm00001d015203_T015","Zm00001d015203","sp|Q9BZH6|WDR11_HUMAN WD repeat-containing protein 11 OS=Homo sapiens GN=WDR11 PE=1 SV=1//1.82724e-09",0.964937787368,3.93457175951e-07]
["LNC_004346","XLOC_043817","lncRNA","Zm00001d039131_T004","Zm00001d039131","sp|P55234|GLGL2_MAIZE Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1//0",0.966777223132,3.0145983998e-07]
["LNC_002907","XLOC_028818","lncRNA","Zm00001d037748_T001","Zm00001d037748","sp|Q5TKD8|TRL2_ORYSJ Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0200100 PE=2 SV=1//1.76261e-97",0.953227618939,1.62943945625e-06]
["LNC_002907","XLOC_028818","lncRNA","Zm00001d043157_T002","Zm00001d043157","sp|Q9LET3|RBL20_ARATH Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1//2.59354e-100",-0.961607540165,6.15865554066e-07]
["LNC_002907","XLOC_028818","lncRNA","Zm00001d016802_T002","Zm00001d016802","sp|Q69SV0|APX8_ORYSJ Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2//0",0.969842348842,1.86759654852E-7]
["LNC_002907","XLOC_028818","lncRNA","Zm00001d039190_T001","Zm00001d039190",null,0.964330701067,4.28280527043e-07]
["LNC_002907","XLOC_028818","lncRNA","Zm00001d034903_T002","Zm00001d034903","sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1//6.7757e-11",-0.950363952029,2.18255572472E-6]
["LNC_002907","XLOC_028818","lncRNA","Zm00001d002953_T002","Zm00001d002953",null,0.952782710138,1.70713639447E-6]
["LNC_002906","XLOC_028812","lncRNA","Zm00001d051927_T001","Zm00001d051927","sp|Q0DWH7|NMNAT_ORYSJ Nicotinamide/nicotinic acid mononucleotide adenylyltransferase OS=Oryza sativa subsp. japonica GN=Os02g0814900 PE=3 SV=2//1.69529e-96",0.956672257796,1.11804136838E-6]
["LNC_002903","XLOC_028791","lncRNA","Zm00001d051545_T003","Zm00001d051545","sp|P74007|SPOT_SYNY3 Probable guanosine-3&apos;,5&apos;-bis(diphosphate) 3&apos;-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1//3.62167e-07",0.960105636143,7.44235540973e-07]
["LNC_002903","XLOC_028791","lncRNA","Zm00001d011579_T005","Zm00001d011579","sp|Q9SA76|PPR64_ARATH Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana GN=EMB2279 PE=2 SV=1//0",0.981946169488,1.4654953695e-08]
["LNC_002909","XLOC_028824","lncRNA","Zm00001d011890_T001","Zm00001d011890","sp|Q5JLP4|CKX4_ORYSJ Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4 PE=2 SV=1//0",0.956876642519,1.09229720557e-06]
["LNC_003749","XLOC_038161","lncRNA","Zm00001d025716_T001","Zm00001d025716",null,0.959521453608,7.99554036757e-07]
["LNC_000298","XLOC_003099","lncRNA","Zm00001d029329_T015","Zm00001d029329","sp|Q9MAC5|PTBP1_ARATH Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana GN=PTB PE=1 SV=1//3.35138e-07",0.978308861578,3.64667065433e-08]
["LNC_000298","XLOC_003099","lncRNA","Zm00001d005231_T013","Zm00001d005231","sp|P36397|ARF1_ARATH ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2//9.2304e-112",0.978928940725,3.15768762249e-08]
["LNC_002839","XLOC_028306","lncRNA","Zm00001d037240_T015","Zm00001d037240","sp|Q8LE52|DHAR3_ARATH Glutathione S-transferase DHAR3, chloroplastic OS=Arabidopsis thaliana GN=DHAR3 PE=1 SV=1//2.7762e-78",0.960504401459,7.08254335624e-07]
["LNC_001835","XLOC_018285","lncRNA","Zm00001d014361_T002","Zm00001d014361","sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1//0",-0.971122426514,1.50673215815e-07]
["LNC_001835","XLOC_018285","lncRNA","Zm00001d028704_T001","Zm00001d028704","sp|Q9ZUU2|AAED1_ARATH Thioredoxin-like protein AAED1, chloroplastic OS=Arabidopsis thaliana GN=At2g37240 PE=2 SV=2//3.01926e-77",0.956853380227,1.09520333802e-06]
["LNC_001835","XLOC_018285","lncRNA","Zm00001d031945_T004","Zm00001d031945",null,0.969521848646,1.96790401308E-7]
["LNC_001835","XLOC_018285","lncRNA","Zm00001d042017_T002","Zm00001d042017","sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0963400 PE=3 SV=2//2.02962e-65",0.960472009166,7.11124497288e-07]
["LNC_002833","XLOC_028255","lncRNA","Zm00001d047528_T005","Zm00001d047528","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//5.38652e-07",0.969381925144,2.01301836089E-7]
["LNC_002833","XLOC_028255","lncRNA","Zm00001d000272_T001","Zm00001d000272","sp|Q9T2L6|PSAA_SORBI Photosystem I P700 chlorophyll a apoprotein A1 OS=Sorghum bicolor GN=psaA PE=3 SV=1//0",0.971479577852,1.4166862683E-7]
["LNC_002833","XLOC_028255","lncRNA","Zm00001d037420_T001","Zm00001d037420","sp|Q9SJ85|Y2474_ARATH BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV=2//9.43977e-64",0.960632283086,6.97012972228e-07]
["LNC_002833","XLOC_028255","lncRNA","Zm00001d022876_T001","Zm00001d022876",null,0.952414279979,1.77367724641e-06]
["LNC_002833","XLOC_028255","lncRNA","Zm00001d009666_T001","Zm00001d009666","sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1//1.17241e-25",-0.952392082871,1.777750925e-06]
["LNC_002837","XLOC_028294","lncRNA","Zm00001d012774_T004","Zm00001d012774","sp|Q9FFW5|PERK8_ARATH Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana GN=PERK8 PE=1 SV=1//2.04925e-166",0.950687426972,2.11351972945e-06]
["LNC_002837","XLOC_028294","lncRNA","Zm00001d041953_T078","Zm00001d041953",null,-0.956971742512,1.08048008207e-06]
["LNC_004363","XLOC_043835","lncRNA","Zm00001d003459_T001","Zm00001d003459","sp|K4BVL1|SPA_SOLLC Protein SPA, chloroplastic OS=Solanum lycopersicum GN=SPA PE=2 SV=1//6.17174e-41",0.954294150436,1.45457309841E-6]
["LNC_004363","XLOC_043835","lncRNA","Zm00001d042257_T001","Zm00001d042257","sp|Q9FG89|PNSB5_ARATH Photosynthetic NDH subunit of subcomplex B 5, chloroplastic OS=Arabidopsis thaliana GN=PNSB5 PE=2 SV=1//1.13768e-64",0.966291937174,3.23864242757e-07]
["LNC_004363","XLOC_043835","lncRNA","Zm00001d029983_T001","Zm00001d029983","sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3//0",0.951733291642,1.90207536788E-6]
["LNC_003406","XLOC_034026","lncRNA","Zm00001d052439_T003","Zm00001d052439","sp|O43120|UAP2_SCHPO Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uap2 PE=1 SV=1//1.44165e-21",0.966483843894,3.14851491989e-07]
["LNC_003406","XLOC_034026","lncRNA","Zm00001d018274_T001","Zm00001d018274","sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA2 PE=2 SV=1//1.6756e-75",0.955283219034,1.3060437114E-6]
["LNC_003406","XLOC_034026","lncRNA","Zm00001d012632_T001","Zm00001d012632",null,0.95994085664,7.5952113221E-7]
["LNC_003406","XLOC_034026","lncRNA","Zm00001d003879_T014","Zm00001d003879","sp|Q9FXG2|SYGC_ARATH Putative glycine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At1g29870 PE=3 SV=2//1.04399e-09",0.957224824533,1.04952597968e-06]
["LNC_003406","XLOC_034026","lncRNA","Zm00001d046555_T001","Zm00001d046555","sp|P23326|RK35_SPIOL 50S ribosomal protein L35, chloroplastic OS=Spinacia oleracea GN=RPL35 PE=1 SV=1//2.53203e-25",0.980274203035,2.27557663823E-8]
["LNC_003406","XLOC_034026","lncRNA","Zm00001d020409_T003","Zm00001d020409","sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1//3.41516e-08",0.967046919443,2.89552699373E-7]
["LNC_003404","XLOC_034016","lncRNA","Zm00001d031893_T001","Zm00001d031893","sp|Q9FF86|DCR_ARATH BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1//1.16997e-125",0.975273089149,6.98420832279e-08]
["LNC_003404","XLOC_034016","lncRNA","Zm00001d016991_T001","Zm00001d016991","sp|B3EWI4|PST2_PETHY Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida PE=1 SV=1//2.8498e-06",0.983496971635,9.37747302032e-09]
["LNC_003404","XLOC_034016","lncRNA","Zm00001d006657_T001","Zm00001d006657","sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=HPT2 PE=3 SV=2//0",0.983780662911,8.60279780746e-09]
["LNC_003402","XLOC_033982","lncRNA","Zm00001d006246_T001","Zm00001d006246","sp|Q9P6K0|YLA3_SCHPO Uncharacterized HTH La-type RNA-binding protein C1527.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1527.03 PE=1 SV=1//1.71424e-08",-0.963982199944,4.49350920877e-07]
["LNC_004753","XLOC_047473","lncRNA","Zm00001d044133_T010","Zm00001d044133","sp|Q9LUH3|LAL5_ARATH MATE efflux family protein LAL5 OS=Arabidopsis thaliana GN=LAL5 PE=2 SV=1//6.53045e-25",0.971282641898,1.46579163918E-7]
["LNC_001213","XLOC_012018","lncRNA","Zm00001d052519_T007","Zm00001d052519","sp|W5EP13|CA1P_WHEAT 2-carboxy-D-arabinitol-1-phosphatase OS=Triticum aestivum PE=1 SV=1//5.27356e-07",0.958291461652,9.26709690763e-07]
["LNC_000180","XLOC_001972","lncRNA","Zm00001d017506_T001","Zm00001d017506",null,0.959733088031,7.79148930263e-07]
["LNC_000187","XLOC_002011","lncRNA","Zm00001d014683_T032","Zm00001d014683","sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio GN=efr3b PE=3 SV=2//1.78653e-07",0.95079209368,2.09155663722E-6]
["LNC_001900","XLOC_018697","lncRNA","Zm00001d043703_T007","Zm00001d043703","sp|Q0JJZ6|CACLC_ORYSJ Anoctamin-like protein Os01g0706700 OS=Oryza sativa subsp. japonica GN=Os01g0706700 PE=2 SV=1//0",0.962558819817,5.44129786562e-07]
["LNC_001900","XLOC_018697","lncRNA","Zm00001d012612_T001","Zm00001d012612","sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1//3.97362e-27",0.973457058552,9.92397544142E-8]
["LNC_001900","XLOC_018697","lncRNA","Zm00001d017676_T001","Zm00001d017676","sp|Q9C5C4|ARGE_ARATH Acetylornithine deacetylase OS=Arabidopsis thaliana GN=At4g17830 PE=2 SV=1//0",0.977794950136,4.09608029717e-08]
["LNC_001900","XLOC_018697","lncRNA","Zm00001d039400_T012","Zm00001d039400","sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens GN=CNOT4 PE=1 SV=3//5.16685e-38",0.979527199818,2.73690703434e-08]
["LNC_001900","XLOC_018697","lncRNA","Zm00001d045919_T003","Zm00001d045919","sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1//0",0.9500475151,2.25180815105e-06]
["LNC_001901","XLOC_018721","lncRNA","Zm00001d034797_T001","Zm00001d034797","sp|A7SKJ3|DPH2_NEMVE Diphthamide biosynthesis protein 2 OS=Nematostella vectensis GN=dph2 PE=3 SV=1//5.58907e-27",0.983658405019,8.93012175318e-09]
["LNC_001902","XLOC_018723","lncRNA","Zm00001d002139_T001","Zm00001d002139","sp|Q9FNP9|AGCT_ARATH Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1//1.50736e-26",0.95499300087,1.34831580345e-06]
["LNC_001904","XLOC_018731","lncRNA","Zm00001d028151_T002","Zm00001d028151","sp|Q9XIH7|PLT1_ARATH Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=3 SV=1//0",0.988835497791,1.34075373026E-9]
["LNC_001904","XLOC_018731","lncRNA","Zm00001d045582_T001","Zm00001d045582","sp|Q9FGL0|WTR44_ARATH WAT1-related protein At5g47470 OS=Arabidopsis thaliana GN=At5g47470 PE=3 SV=1//1.51938e-45",0.963709421571,4.66411207878e-07]
["LNC_000317","XLOC_003317","lncRNA","Zm00001d040441_T001","Zm00001d040441",null,0.979512091478,2.7469510222E-8]
["LNC_003572","XLOC_035956","lncRNA","Zm00001d019217_T001","Zm00001d019217","sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=2 SV=1//5.01576e-30",0.969991759319,1.82224835665E-7]
["LNC_003572","XLOC_035956","lncRNA","Zm00001d016082_T001","Zm00001d016082","sp|Q9SUP7|HMGB6_ARATH High mobility group B protein 6 OS=Arabidopsis thaliana GN=HMGB6 PE=2 SV=1//7.17117e-06",-0.958980913226,8.53602743602e-07]
["LNC_003572","XLOC_035956","lncRNA","Zm00001d046802_T001","Zm00001d046802","sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=2 SV=1//6.10524e-29",0.953006626731,1.66767367649E-6]
["LNC_003572","XLOC_035956","lncRNA","Zm00001d009212_T003","Zm00001d009212","sp|A8MS68|PLPD1_ARATH Dihydrolipoyl dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=LPD1 PE=2 SV=1//4.56964e-34",0.963335706815,4.9061610774e-07]
["LNC_000983","XLOC_010010","lncRNA","Zm00001d002835_T005","Zm00001d002835","sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=2 SV=1//1.18276e-152",-0.959664076818,7.8575676604E-7]
["LNC_000983","XLOC_010010","lncRNA","Zm00001d049857_T002","Zm00001d049857","sp|Q0WQK2|ZDHC9_ARATH Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana GN=PAT07 PE=1 SV=1//7.31662e-171",-0.958240524954,9.32301839611e-07]
["LNC_000983","XLOC_010010","lncRNA","Zm00001d005324_T004","Zm00001d005324","sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2//4.4086e-08",0.951982890612,1.85418645104e-06]
["LNC_000983","XLOC_010010","lncRNA","Zm00001d002089_T073","Zm00001d002089","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//0",0.962944322427,5.1702517645e-07]
["LNC_000983","XLOC_010010","lncRNA","Zm00001d004977_T001","Zm00001d004977","sp|Q2QY07|CCDA2_ORYSJ Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica GN=CCDA2 PE=3 SV=1//2.39632e-155",0.980481809874,2.15907531853E-8]
["LNC_000983","XLOC_010010","lncRNA","Zm00001d042047_T001","Zm00001d042047","sp|Q6YV88|C71Z7_ORYSJ Ent-cassadiene C2-hydroxylase OS=Oryza sativa subsp. japonica GN=CYP71Z7 PE=1 SV=1//7.97351e-113",-0.95775006113,9.87531694203e-07]
["LNC_000983","XLOC_010010","lncRNA","Zm00001d006440_T002","Zm00001d006440","sp|O80507|CSK2E_ARATH Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1//1.41326e-123",0.976712144695,5.18760099322e-08]
["LNC_000985","XLOC_010032","lncRNA","Zm00001d048074_T002","Zm00001d048074","sp|Q84TI3|OBE4_ARATH Protein OBERON 4 OS=Arabidopsis thaliana GN=OBE4 PE=1 SV=2//2.40343e-113",0.95014499535,2.23029149748E-6]
["LNC_005757","XLOC_057620","lncRNA","Zm00001d002143_T006","Zm00001d002143","sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2//1.47482e-96",0.974625678767,7.93902037444e-08]
["LNC_005751","XLOC_057592","lncRNA","Zm00001d039193_T001","Zm00001d039193","sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3 SV=2//0",0.963727901956,4.65239385017E-7]
["LNC_005751","XLOC_057592","lncRNA","Zm00001d020603_T004","Zm00001d020603","sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1//2.06025e-11",0.990453788819,6.14445383462e-10]
["LNC_005751","XLOC_057592","lncRNA","Zm00001d054067_T001","Zm00001d054067","sp|Q9ZSY9|C74B2_ARATH Linolenate hydroperoxide lyase, chloroplastic OS=Arabidopsis thaliana GN=CYP74B2 PE=1 SV=1//2.32924e-153",0.951754314823,1.89800435324e-06]
["LNC_005750","XLOC_057581","lncRNA","Zm00001d029049_T001","Zm00001d029049","sp|Q9LR64|PB27A_ARATH Photosystem II repair protein PSB27-H1, chloroplastic OS=Arabidopsis thaliana GN=PSB27-1 PE=1 SV=1//8.9743e-55",0.96742805935,2.73366348003e-07]
["LNC_005750","XLOC_057581","lncRNA","Zm00001d014718_T001","Zm00001d014718","sp|O22773|TL16_ARATH Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At4g02530 PE=1 SV=3//1.4291e-47",0.976526425876,5.39609472661e-08]
["LNC_005750","XLOC_057581","lncRNA","Zm00001d033665_T002","Zm00001d033665","sp|P82163|RR13_SPIOL 30S ribosomal protein S13, chloroplastic OS=Spinacia oleracea GN=RPS13 PE=1 SV=2//5.89352e-74",0.980439343806,2.18250981732E-8]
["LNC_005750","XLOC_057581","lncRNA","Zm00001d023699_T001","Zm00001d023699","sp|A3C6G9|GCSH_ORYSJ Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1//2.06903e-66",0.97186519157,1.32432905087E-7]
["LNC_004367","XLOC_043850","lncRNA","Zm00001d026645_T005","Zm00001d026645","sp|Q9ZTZ7|KEA1_ARATH K(+) efflux antiporter 1, chloroplastic OS=Arabidopsis thaliana GN=KEA1 PE=1 SV=2//2.41156e-61",-0.957760366289,9.86345157066e-07]
["LNC_004367","XLOC_043850","lncRNA","Zm00001d041985_T001","Zm00001d041985",null,0.964070031383,4.43964625285e-07]
["LNC_002293","XLOC_022692","lncRNA","Zm00001d014991_T002","Zm00001d014991","sp|Q49XT0|RS1_STAS1 30S ribosomal protein S1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsA PE=3 SV=1//2.76182e-11",0.95780982808,9.80665868289e-07]
["LNC_006047","XLOC_060167","lncRNA","Zm00001d033553_T036","Zm00001d033553","sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2//6.47648e-14",0.959912309714,7.6219441425e-07]
["LNC_006041","XLOC_060135","lncRNA","Zm00001d033040_T001","Zm00001d033040","sp|Q944L7|Y1480_ARATH Uncharacterized protein At1g18480 OS=Arabidopsis thaliana GN=At1g18480 PE=2 SV=1//9.68181e-44",0.964410700806,4.23556492102e-07]
["LNC_006043","XLOC_060138","lncRNA","Zm00001d031657_T002","Zm00001d031657","sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1//0",0.952722391692,1.71789245851e-06]
["LNC_004573","XLOC_045983","lncRNA","Zm00001d028400_T002","Zm00001d028400","sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1//8.62081e-66",0.954891154438,1.36340505374e-06]
["LNC_000876","XLOC_009069","lncRNA","Zm00001d045089_T001","Zm00001d045089","sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1//4.48914e-34",0.961893575492,5.93550017358e-07]
["LNC_000873","XLOC_009054","lncRNA","Zm00001d008205_T001","Zm00001d008205","sp|Q6AT90|APG_ORYSJ Transcription factor APG OS=Oryza sativa subsp. japonica GN=APG PE=1 SV=1//5.77818e-46",0.969435195868,1.99574675452e-07]
["LNC_005938","XLOC_059385","lncRNA","Zm00001d021977_T001","Zm00001d021977",null,0.999017239664,7.1054273576E-15]
["LNC_005938","XLOC_059385","lncRNA","Zm00001d042633_T001","Zm00001d042633",null,0.960068493546,7.4765950453e-07]
["LNC_000728","XLOC_007523","lncRNA","Zm00001d032536_T007","Zm00001d032536","sp|O64823|MCU2_ARATH Calcium uniporter protein 2, mitochondrial OS=Arabidopsis thaliana GN=At2g23790 PE=2 SV=1//3.43754e-41",0.957500283376,1.01663962937e-06]
["LNC_002343","XLOC_023162","lncRNA","Zm00001d043009_T001","Zm00001d043009",null,0.962133668671,5.75319111462e-07]
["LNC_002345","XLOC_023184","lncRNA","Zm00001d020071_T001","Zm00001d020071","sp|Q8GW61|STP14_ARATH Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2//0",0.963193958754,5.00053769947e-07]
["LNC_003353","XLOC_033495","lncRNA","Zm00001d036971_T048","Zm00001d036971","sp|Q8IX12|CCAR1_HUMAN Cell division cycle and apoptosis regulator protein 1 OS=Homo sapiens GN=CCAR1 PE=1 SV=2//6.37508e-21",1,0]
["LNC_003353","XLOC_033495","lncRNA","Zm00001d007121_T008","Zm00001d007121","sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1//6.02865e-17",0.999999999926,0]
["LNC_003350","XLOC_033442","lncRNA","Zm00001d012640_T008","Zm00001d012640","sp|F4HQX1|JAL3_ARATH Jacalin-related lectin 3 OS=Arabidopsis thaliana GN=JAL3 PE=2 SV=1//2.32452e-19",0.968789381148,2.21327935535E-7]
["LNC_004402","XLOC_044188","lncRNA","Zm00001d047465_T001","Zm00001d047465",null,0.961900315648,5.93032035479e-07]
["LNC_000618","XLOC_006625","lncRNA","Zm00001d016737_T001","Zm00001d016737","sp|Q9FNY0|E2FA_ARATH Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA PE=1 SV=1//3.57841e-108",0.968090431259,2.46954499517e-07]
["LNC_000612","XLOC_006579","lncRNA","Zm00001d029055_T002","Zm00001d029055","sp|Q86H36|RPA1_DICDI DNA-directed RNA polymerase I subunit rpa1 OS=Dictyostelium discoideum GN=polr1a PE=3 SV=1//5.83771e-27",0.966698161746,3.05023214242e-07]
["LNC_006135","XLOC_060916","lncRNA","Zm00001d040422_T016","Zm00001d040422","sp|Q3EAQ5|PTR36_ARATH Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2//2.50553e-29",0.969258239518,2.05357903793E-7]
["LNC_006135","XLOC_060916","lncRNA","Zm00001d003431_T008","Zm00001d003431","sp|Q9FJ21|PME58_ARATH Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1//1.24451e-150",1,0]
["LNC_006135","XLOC_060916","lncRNA","Zm00001d024572_T003","Zm00001d024572","sp|Q9C5L3|GLPT1_ARATH Putative glycerol-3-phosphate transporter 1 OS=Arabidopsis thaliana GN=At3g47420 PE=2 SV=1//0",0.999999999928,0]
["LNC_000699","XLOC_007230","lncRNA","Zm00001d028926_T002","Zm00001d028926","sp|Q10MC0|NIN1_ORYSJ Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=NIN1 PE=1 SV=1//0",0.969098456629,2.10693713143E-7]
["LNC_000699","XLOC_007230","lncRNA","Zm00001d044186_T309","Zm00001d044186","sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1//7.87032e-13",0.965384862849,3.69282822765e-07]
["LNC_004107","XLOC_041494","lncRNA","Zm00001d052620_T003","Zm00001d052620",null,0.961946137892,5.89520105843e-07]
["LNC_000076","XLOC_001153","lncRNA","Zm00001d048150_T006","Zm00001d048150","sp|Q43295|APK1_ARATH Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=APK1 PE=1 SV=1//6.59553e-11",0.952431699685,1.77048551997E-6]
["LNC_001583","XLOC_015242","lncRNA","Zm00001d045647_T002","Zm00001d045647","sp|Q9FHQ1|GDL80_ARATH GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1//1.69083e-126",0.954203114838,1.46888997299e-06]
["LNC_002758","XLOC_027427","lncRNA","Zm00001d017037_T001","Zm00001d017037",null,-0.963355629335,4.89301085239e-07]
["LNC_002758","XLOC_027427","lncRNA","Zm00001d050359_T001","Zm00001d050359","sp|Q9ZU90|SKI28_ARATH F-box protein SKIP28 OS=Arabidopsis thaliana GN=SKIP28 PE=1 SV=1//8.76428e-47",-0.953350617812,1.60846254661e-06]
["LNC_002758","XLOC_027427","lncRNA","Zm00001d030152_T001","Zm00001d030152","sp|Q09463|RNF5_CAEEL RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1//1.38292e-23",0.974456960319,8.20416377056e-08]
["LNC_005025","XLOC_050303","lncRNA","Zm00001d013193_T002","Zm00001d013193",null,0.950615055851,2.12881262662e-06]
["LNC_005020","XLOC_050213","lncRNA","Zm00001d047702_T001","Zm00001d047702","sp|C5WNF5|CSPL3_SORBI CASP-like protein 4B1 OS=Sorghum bicolor GN=Sb01g038100 PE=2 SV=1//1.04388e-51",0.950639643558,2.12360713592e-06]
["LNC_001059","XLOC_010660","lncRNA","Zm00001d047093_T001","Zm00001d047093","sp|Q7XCA7|EXPB6_ORYSJ Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1//1.03985e-109",0.976224917814,5.74874938764e-08]
["LNC_004991","XLOC_049922","lncRNA","Zm00001d007089_T009","Zm00001d007089","sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana GN=CHR5 PE=3 SV=1//0",0.962424195041,5.53856762231e-07]
["LNC_004630","XLOC_046432","lncRNA","Zm00001d050860_T001","Zm00001d050860","sp|Q93Y91|STP5_ARATH Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1//6.50149e-165",0.975941880989,6.09627901493e-08]
["LNC_000271","XLOC_002772","lncRNA","Zm00001d020684_T001","Zm00001d020684",null,0.969561394941,1.95530041713e-07]
["LNC_003974","XLOC_040390","lncRNA","Zm00001d040606_T001","Zm00001d040606","sp|Q5EA50|RABEK_BOVIN Rab9 effector protein with kelch motifs OS=Bos taurus GN=RABEPK PE=2 SV=1//6.9277e-29",0.9569358467,1.08492850703e-06]
["LNC_003607","XLOC_036171","lncRNA","Zm00001d017178_T003","Zm00001d017178",null,0.990980088975,4.63149962826e-10]
["LNC_003607","XLOC_036171","lncRNA","Zm00001d032222_T002","Zm00001d032222","sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1//0",0.968234936839,2.41471991735E-7]
["LNC_003607","XLOC_036171","lncRNA","Zm00001d008940_T003","Zm00001d008940","sp|Q6NLC1|AB2D_ARATH ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=1//4.42829e-21",0.978211089323,3.72898849577E-8]
["LNC_003607","XLOC_036171","lncRNA","Zm00001d002208_T001","Zm00001d002208","sp|Q1G3K8|RIC7_ARATH CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1//5.72967e-15",0.975776537476,6.30691256998e-08]
["LNC_003607","XLOC_036171","lncRNA","Zm00001d007092_T004","Zm00001d007092","sp|A2BW76|EFTS_PROM5 Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1//2.04558e-73",0.960952833974,6.69457241642e-07]
["LNC_003607","XLOC_036171","lncRNA","Zm00001d038618_T001","Zm00001d038618","sp|Q94AS9|CNGC4_ARATH Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2//0",0.973264508154,1.0285858032E-7]
["LNC_001136","XLOC_011395","lncRNA","Zm00001d001139_T001","Zm00001d001139",null,0.953121870133,1.64764745092E-6]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d002362_T001","Zm00001d002362","sp|Q9FV52|MAP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2//4.84029e-27",-0.962646271669,5.3788427085e-07]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d028894_T001","Zm00001d028894","sp|Q9LSP7|UBC32_ARATH Ubiquitin-conjugating enzyme E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1//3.98746e-29",-0.965025872664,3.88597433474e-07]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d026252_T001","Zm00001d026252","sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2//3.62532e-70",0.974696023323,7.830510107e-08]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d029482_T001","Zm00001d029482",null,-0.961614444129,6.15319194928E-7]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d027295_T002","Zm00001d027295","sp|Q8H7U1|TBB2_ORYSJ Tubulin beta-2 chain OS=Oryza sativa subsp. japonica GN=TUBB2 PE=2 SV=1//0",0.987704929885,2.16763051952E-9]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d002828_T001","Zm00001d002828","sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=1 SV=2//3.02158e-99",0.971111191468,1.50963688661e-07]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d025136_T001","Zm00001d025136",null,0.959629322071,7.89101350929e-07]
["LNC_004974","XLOC_049751","lncRNA","Zm00001d018613_T004","Zm00001d018613","sp|Q9LHL3|LRP6C_ARATH La-related protein 6C OS=Arabidopsis thaliana GN=LARP6C PE=3 SV=1//1.49826e-66",-0.95584163627,1.22766833009E-6]
["LNC_000478","XLOC_005278","lncRNA","Zm00001d003382_T010","Zm00001d003382","sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=2 SV=2//1.23156e-07",0.956391576065,1.15417843949E-6]
["LNC_000478","XLOC_005278","lncRNA","Zm00001d033130_T004","Zm00001d033130","sp|Q9M8Z5|NSN1_ARATH Guanine nucleotide-binding protein-like NSN1 OS=Arabidopsis thaliana GN=NSN1 PE=2 SV=1//0",0.956482659633,1.1423515236e-06]
["LNC_000478","XLOC_005278","lncRNA","Zm00001d043504_T043","Zm00001d043504","sp|Q8W1Y3|KP1_ARATH Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2//1.78725e-179",0.96986162431,1.86169624161e-07]
["LNC_001010","XLOC_010263","lncRNA","Zm00001d039612_T027","Zm00001d039612",null,0.977826464348,4.06731159863e-08]
["LNC_005237","XLOC_052371","lncRNA","Zm00001d031853_T001","Zm00001d031853",null,0.955162948988,1.32343218695e-06]
["LNC_005237","XLOC_052371","lncRNA","Zm00001d010972_T001","Zm00001d010972","sp|Q38834|R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=1 SV=2//5.52376e-10",0.957634926144,1.00086558907e-06]
["LNC_005237","XLOC_052371","lncRNA","Zm00001d028267_T007","Zm00001d028267","sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2//0",0.964074085292,4.43717262932e-07]
["LNC_005237","XLOC_052371","lncRNA","Zm00001d032897_T001","Zm00001d032897",null,0.952004874548,1.8500148169e-06]
["LNC_001578","XLOC_015219","lncRNA","Zm00001d036535_T001","Zm00001d036535","sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1//0",0.969011006661,2.13660388715e-07]
["LNC_001578","XLOC_015219","lncRNA","Zm00001d032359_T001","Zm00001d032359","sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1//2.00441e-26",0.967525782503,2.6933449071e-07]
["LNC_001227","XLOC_012152","lncRNA","Zm00001d014865_T001","Zm00001d014865","sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3//0",-0.951250186729,1.9975508467e-06]
["LNC_001227","XLOC_012152","lncRNA","Zm00001d039260_T002","Zm00001d039260","sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica GN=GLK2 PE=2 SV=1//1.14217e-12",-0.966679390154,3.05874169397e-07]
["LNC_001227","XLOC_012152","lncRNA","Zm00001d007502_T001","Zm00001d007502","sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO PE=2 SV=1//0",-0.952019408674,1.84726093661e-06]
["LNC_001227","XLOC_012152","lncRNA","Zm00001d049379_T013","Zm00001d049379","sp|Q9Y5Q9|TF3C3_HUMAN General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=1//2.58203e-21",-0.972973692172,1.08522691582e-07]
["LNC_004375","XLOC_043933","lncRNA","Zm00001d013378_T001","Zm00001d013378","sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937 OS=Dictyostelium discoideum GN=DDB_G0281937 PE=3 SV=1//1.09621e-20",0.951901878369,1.86962365589E-6]
["LNC_005036","XLOC_050476","lncRNA","Zm00001d011430_T001","Zm00001d011430","sp|Q9SHJ5|GPAT1_ARATH Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1//1.00026e-151",0.9696429538,1.9295100584e-07]
["LNC_000693","XLOC_007213","lncRNA","Zm00001d012294_T008","Zm00001d012294","sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1//1.28836e-67",0.995788560378,1.03597130874E-11]
["LNC_005923","XLOC_059218","lncRNA","Zm00001d011569_T001","Zm00001d011569","sp|P12403|ATPZ_NOSS1 ATP synthase protein I OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=atpI PE=3 SV=2//6.7685e-09",0.960601439573,6.99711188545e-07]
["LNC_005923","XLOC_059218","lncRNA","Zm00001d002274_T001","Zm00001d002274",null,-0.959968120179,7.56974992576e-07]
["LNC_005923","XLOC_059218","lncRNA","Zm00001d022144_T002","Zm00001d022144","sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1//3.52419e-10",0.96745369262,2.72304157667e-07]
["LNC_003759","XLOC_038247","lncRNA","Zm00001d004489_T001","Zm00001d004489","sp|P31605|YCF23_CYAPA Uncharacterized protein ycf23 OS=Cyanophora paradoxa GN=ycf23 PE=3 SV=1//6.25034e-06",0.951246507709,1.99829222591e-06]
["LNC_003759","XLOC_038247","lncRNA","Zm00001d031186_T002","Zm00001d031186","sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1//1.55122e-07",0.958741213179,8.78479998523e-07]
["LNC_001829","XLOC_018242","lncRNA","Zm00001d044570_T026","Zm00001d044570","sp|B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana GN=PRP40A PE=1 SV=1//0",0.968437735941,2.33941609196e-07]
["LNC_005345","XLOC_053790","lncRNA","Zm00001d036118_T001","Zm00001d036118","sp|Q5VPE5|HOX28_ORYSJ Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1//2.18992e-34",0.961080716694,6.58708665391e-07]
["LNC_003991","XLOC_040594","lncRNA","Zm00001d026472_T001","Zm00001d026472","sp|O49485|SERA1_ARATH D-3-phosphoglycerate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=PGDH1 PE=1 SV=1//0",-0.950367351876,2.18182095146e-06]
["LNC_003991","XLOC_040594","lncRNA","Zm00001d020071_T001","Zm00001d020071","sp|Q8GW61|STP14_ARATH Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2//0",0.951532667693,1.94127452913e-06]
["LNC_003995","XLOC_040594","lncRNA","Zm00001d045212_T001","Zm00001d045212","sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1 SV=1//1.17497e-26",0.97420516884,8.61292823728e-08]
["LNC_003995","XLOC_040594","lncRNA","Zm00001d010585_T006","Zm00001d010585","sp|Q0GZS3|USP_CUCME UDP-sugar pyrophosphorylase OS=Cucumis melo GN=USP PE=1 SV=1//1.2604e-07",-0.955195166849,1.3187562627E-6]
["LNC_001825","XLOC_018225","lncRNA","Zm00001d009777_T001","Zm00001d009777","sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana GN=ATL12 PE=3 SV=1//1.88918e-40",0.958269372819,9.29131459992E-7]
["LNC_001824","XLOC_018215","lncRNA","Zm00001d053450_T086","Zm00001d053450","sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2//3.12511e-17",0.973194047846,1.04208777385e-07]
["LNC_002808","XLOC_027974","lncRNA","Zm00001d039589_T001","Zm00001d039589","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//3.83809e-100",0.951869943068,1.87573699506e-06]
["LNC_002808","XLOC_027974","lncRNA","Zm00001d053067_T001","Zm00001d053067","sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1//1.46607e-118",0.95785492549,9.75510366708e-07]
["LNC_002808","XLOC_027974","lncRNA","Zm00001d041578_T001","Zm00001d041578",null,0.971694167398,1.36467937839e-07]
["LNC_002805","XLOC_027903","lncRNA","Zm00001d030666_T042","Zm00001d030666",null,-0.953992667471,1.50241461731e-06]
["LNC_002805","XLOC_027903","lncRNA","Zm00001d016992_T001","Zm00001d016992",null,0.985516927457,4.8982604639e-09]
["LNC_002806","XLOC_027932","lncRNA","Zm00001d036351_T019","Zm00001d036351","sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3//7.53543e-139",0.963729165174,4.65159371243E-7]
["LNC_002802","XLOC_027884","lncRNA","Zm00001d010711_T001","Zm00001d010711","sp|O94424|T2FB_SCHPO Transcription initiation factor IIF subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tfg2 PE=1 SV=1//6.37657e-17",0.953468447862,1.58856866994E-6]
["LNC_001472","XLOC_014658","lncRNA","Zm00001d030266_T005","Zm00001d030266","sp|Q9SJM0|CALSA_ARATH Callose synthase 10 OS=Arabidopsis thaliana GN=CALS10 PE=2 SV=5//0",0.988680951075,1.43578526846e-09]
["LNC_004879","XLOC_048982","lncRNA","Zm00001d050032_T001","Zm00001d050032","sp|P15280|GLGS_ORYSJ Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=AGPS PE=2 SV=4//0",0.953872834196,1.5217737972e-06]
["LNC_004748","XLOC_047458","lncRNA","Zm00001d011913_T001","Zm00001d011913","sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1//1.44697e-138",0.960343699708,7.22584462487e-07]
["LNC_005695","XLOC_057161","lncRNA","Zm00001d017178_T004","Zm00001d017178",null,0.9838697209,8.37044389357e-09]
["LNC_005695","XLOC_057161","lncRNA","Zm00001d031850_T001","Zm00001d031850","sp|Q9SL05|PGR5_ARATH Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana GN=PGR5 PE=1 SV=1//5.24718e-46",0.954618833641,1.40441042085e-06]
["LNC_005695","XLOC_057161","lncRNA","GRMZM5G811749_T01","GRMZM5G811749","sp|A1E9Q6|RR16_SORBI 30S ribosomal protein S16, chloroplastic OS=Sorghum bicolor GN=rps16 PE=3 SV=1//1.02397e-50",0.971531006099,1.40408101368e-07]
["LNC_005690","XLOC_057114","lncRNA","Zm00001d033494_T002","Zm00001d033494","sp|O75175|CNOT3_HUMAN CCR4-NOT transcription complex subunit 3 OS=Homo sapiens GN=CNOT3 PE=1 SV=1//1.08657e-40",0.957628954329,1.00156107052E-6]
["LNC_004189","XLOC_042308","lncRNA","Zm00001d008869_T001","Zm00001d008869","sp|A2WLR5|HOX29_ORYSI Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2//0",0.954136505771,1.47943603146E-6]
["LNC_006112","XLOC_060721","lncRNA","Zm00001d002959_T002","Zm00001d002959","sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1//1.69916e-42",0.969793202774,1.88270775414e-07]
["LNC_006112","XLOC_060721","lncRNA","Zm00001d012602_T001","Zm00001d012602","sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2//2.78392e-26",0.96288904021,5.20844692264e-07]
["LNC_006112","XLOC_060721","lncRNA","Zm00001d018389_T001","Zm00001d018389","sp|Q9FYQ8|TMN11_ARATH Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana GN=TMN11 PE=2 SV=1//0",0.972785654311,1.12315300171E-7]
["LNC_001917","XLOC_018786","lncRNA","Zm00001d002731_T001","Zm00001d002731","sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1//2.76081e-30",0.974609100279,7.96476711251e-08]
["LNC_001917","XLOC_018786","lncRNA","Zm00001d051316_T001","Zm00001d051316","sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1//4.22115e-15",0.982414355057,1.28608699246e-08]
["LNC_001917","XLOC_018786","lncRNA","Zm00001d000400_T001","Zm00001d000400","sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1 SV=1//6.1509e-06",0.985971725181,4.17917611628e-09]
["LNC_001917","XLOC_018786","lncRNA","Zm00001d027673_T001","Zm00001d027673","sp|A2XCJ1|U496C_ORYSI UPF0496 protein 3 OS=Oryza sativa subsp. indica GN=OsI_009784 PE=3 SV=2//2.03323e-160",0.980117994796,2.36649539964E-8]
["LNC_001913","XLOC_018769","lncRNA","Zm00001d048281_T001","Zm00001d048281","sp|Q9ZUF7|LOR6_ARATH Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910 PE=2 SV=1//2.96315e-55",0.962462461405,5.51077977473e-07]
["LNC_001913","XLOC_018769","lncRNA","Zm00001d032443_T001","Zm00001d032443",null,0.960160058577,7.39241158065E-7]
["LNC_002116","XLOC_021074","lncRNA","Zm00001d050889_T001","Zm00001d050889","sp|Q9XI73|PNSL2_ARATH Photosynthetic NDH subunit of lumenal location 2, chloroplastic OS=Arabidopsis thaliana GN=PNSL2 PE=1 SV=1//3.94313e-53",0.969921578814,1.84343866394e-07]
["LNC_002112","XLOC_021027","lncRNA","Zm00001d022189_T002","Zm00001d022189","sp|Q9FMG4|SC35_ARATH Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana GN=SC35 PE=1 SV=1//8.23422e-11",0.974424002541,8.25677104466e-08]
["LNC_002112","XLOC_021027","lncRNA","Zm00001d013059_T013","Zm00001d013059","sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B OS=Arabidopsis thaliana GN=VPS35B PE=1 SV=1//2.48955e-14",0.97433928411,8.39323259783E-8]
["LNC_003509","XLOC_035262","lncRNA","Zm00001d032469_T001","Zm00001d032469","sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1//6.15348e-57",0.962626929831,5.39260667232e-07]
["LNC_003507","XLOC_035225","lncRNA","Zm00001d022388_T012","Zm00001d022388","sp|P23225|GLTB_MAIZE Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1//2.22116e-08",0.971959924434,1.3023907508E-7]
["LNC_005768","XLOC_057681","lncRNA","Zm00001d027359_T001","Zm00001d027359","sp|P45432|CSN1_ARATH COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1 PE=1 SV=2//0",0.952979524144,1.67241131122E-6]
["LNC_005762","XLOC_057656","lncRNA","Zm00001d052668_T001","Zm00001d052668",null,0.950776000662,2.09492174097e-06]
["LNC_004772","XLOC_047709","lncRNA","Zm00001d011840_T001","Zm00001d011840",null,0.950769022201,2.09638229443E-6]
["LNC_000088","XLOC_001265","lncRNA","Zm00001d000703_T001","Zm00001d000703",null,0.974718649997,7.79585951349e-08]
["LNC_005569","XLOC_055627","lncRNA","Zm00001d009315_T001","Zm00001d009315",null,0.958773546618,8.75091087149e-07]
["LNC_005569","XLOC_055627","lncRNA","Zm00001d011680_T001","Zm00001d011680","sp|Q8VZV9|PTA7_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1//3.52511e-34",0.987813371874,2.07408645814e-09]
["LNC_005569","XLOC_055627","lncRNA","Zm00001d028742_T001","Zm00001d028742","sp|P48620|FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1//0",0.961471250926,6.26730243036e-07]
["LNC_005566","XLOC_055591","lncRNA","Zm00001d028915_T009","Zm00001d028915","sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2 SV=1//7.47615e-08",0.958605400334,8.92828755816e-07]
["LNC_006053","XLOC_060181","lncRNA","Zm00001d042847_T001","Zm00001d042847","sp|Q9M394|SCKL1_ARATH Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana GN=FLN1 PE=1 SV=1//0",0.982190591293,1.36950393248E-8]
["LNC_006053","XLOC_060181","lncRNA","Zm00001d053807_T001","Zm00001d053807","sp|Q6H6D2|HEM3_ORYSJ Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMC PE=2 SV=1//0",0.984307126316,7.30079241507e-09]
["LNC_006053","XLOC_060181","lncRNA","Zm00001d038155_T001","Zm00001d038155","sp|Q93W28|Y4554_ARATH Uncharacterized protein At4g15545 OS=Arabidopsis thaliana GN=At4g15545 PE=1 SV=1//7.57644e-77",0.976351755659,5.59822572743e-08]
["LNC_006053","XLOC_060181","lncRNA","Zm00001d007267_T003","Zm00001d007267","sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=1 SV=1//5.83198e-17",0.969722010378,1.90477007056e-07]
["LNC_006053","XLOC_060181","lncRNA","GRMZM5G855343_T01","GRMZM5G855343","sp|A1E9Q3|RR19_SORBI 30S ribosomal protein S19, chloroplastic OS=Sorghum bicolor GN=rps19 PE=3 SV=1//1.03129e-61",0.984239455298,7.4587225285e-09]
["LNC_006053","XLOC_060181","lncRNA","Zm00001d049160_T001","Zm00001d049160","sp|O22056|SIGB_ARATH RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2//2.90666e-38",0.983273199978,1.00269512693e-08]
["LNC_006051","XLOC_060174","lncRNA","Zm00001d041776_T001","Zm00001d041776","sp|Q41761|HGGL2_MAIZE 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 2, chloroplastic OS=Zea mays GN=GLU2 PE=1 SV=1//0",0.965423456652,3.67252704025e-07]
["LNC_006050","XLOC_060174","lncRNA","Zm00001d044994_T001","Zm00001d044994","sp|Q6DIV6|VIAAT_XENTR Vesicular inhibitory amino acid transporter OS=Xenopus tropicalis GN=slc32a1 PE=2 SV=1//2.99339e-07",0.984041187777,7.93719001635e-09]
["LNC_004299","XLOC_043468","lncRNA","Zm00001d019326_T002","Zm00001d019326",null,0.96213919994,5.74904416961e-07]
["LNC_006055","XLOC_060181","lncRNA","Zm00001d024009_T002","Zm00001d024009","sp|Q2QVG9|CLPC2_ORYSJ Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC2 PE=2 SV=2//7.69588e-69",0.956584863021,1.12919550044e-06]
["LNC_006055","XLOC_060181","lncRNA","Zm00001d013795_T002","Zm00001d013795","sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3//2.30183e-18",0.951154715573,2.01686051904E-6]
["LNC_006055","XLOC_060181","lncRNA","Zm00001d017330_T001","Zm00001d017330","sp|Q9FN42|CLPP2_ARATH ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1//3.00531e-92",0.982832471121,1.14109666161E-8]
["LNC_006055","XLOC_060181","lncRNA","Zm00001d036343_T004","Zm00001d036343",null,0.953480444577,1.58655420335e-06]
["LNC_002022","XLOC_019836","lncRNA","Zm00001d046263_T002","Zm00001d046263","sp|Q42400|AAP1_ARATH Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1//2.63159e-152",0.971605963254,1.38586880638E-7]
["LNC_004560","XLOC_045757","lncRNA","Zm00001d032980_T030","Zm00001d032980","sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2//0",0.960059325552,7.48506572279e-07]
["LNC_003210","XLOC_031911","lncRNA","Zm00001d023536_T003","Zm00001d023536","sp|Q53RM0|CHLI_ORYSJ Magnesium-chelatase subunit ChlI, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLI PE=1 SV=1//0",0.970004502005,1.81842171099E-7]
["LNC_003210","XLOC_031911","lncRNA","Zm00001d051807_T001","Zm00001d051807","sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1//1.87415e-09",0.975359040466,6.86465555511e-08]
["LNC_004565","XLOC_045893","lncRNA","Zm00001d033002_T001","Zm00001d033002","sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1//0",0.956261652874,1.17121657106E-6]
["LNC_000887","XLOC_009215","lncRNA","Zm00001d045603_T056","Zm00001d045603","sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 PE=1 SV=1//3.47943e-107",0.971147954764,1.50014857647E-7]
["LNC_000887","XLOC_009215","lncRNA","Zm00001d040311_T012","Zm00001d040311","sp|Q9FQ03|XRN3_ARATH 5&apos;-3&apos; exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 PE=2 SV=1//8.6139e-19",0.980982607572,1.89753626145e-08]
["LNC_000887","XLOC_009215","lncRNA","Zm00001d023530_T014","Zm00001d023530",null,0.986900840728,2.9714093408E-9]
["LNC_005116","XLOC_051277","lncRNA","Zm00001d005694_T001","Zm00001d005694",null,0.957057439923,1.06991848492E-6]
["LNC_005116","XLOC_051277","lncRNA","Zm00001d051082_T001","Zm00001d051082",null,0.979629787424,2.66947863814E-8]
["LNC_005116","XLOC_051277","lncRNA","Zm00001d023792_T001","Zm00001d023792","sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2//0",0.955592293597,1.26218883945E-6]
["LNC_005116","XLOC_051277","lncRNA","Zm00001d027366_T002","Zm00001d027366","sp|Q10SM7|PX111_ORYSJ Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1//9.29918e-157",0.978118695967,3.80813220957e-08]
["LNC_004628","XLOC_046405","lncRNA","Zm00001d011891_T001","Zm00001d011891","sp|Q8LAS8|SFGH_ARATH S-formylglutathione hydrolase OS=Arabidopsis thaliana GN=SFGH PE=1 SV=2//1.50489e-148",0.986506243026,3.44447226297e-09]
["LNC_004628","XLOC_046405","lncRNA","Zm00001d034804_T001","Zm00001d034804",null,0.954672998439,1.3961774612e-06]
["LNC_005906","XLOC_059012","lncRNA","Zm00001d042023_T002","Zm00001d042023","sp|Q9AYP4|RS10_ORYSJ 40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2//2.14852e-58",0.982608029941,1.21720540314E-8]
["LNC_005906","XLOC_059012","lncRNA","Zm00001d027844_T002","Zm00001d027844","sp|Q8SAY0|RK18_ORYSJ 50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL18 PE=2 SV=1//1.96612e-17",0.986087812891,4.00987532068E-9]
["LNC_005902","XLOC_058970","lncRNA","Zm00001d023227_T001","Zm00001d023227",null,0.950178917704,2.22284223428e-06]
["LNC_003804","XLOC_038593","lncRNA","Zm00001d006335_T001","Zm00001d006335","sp|Q6R2K2|SRF4_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1//0",0.964348931519,4.27200340436e-07]
["LNC_003804","XLOC_038593","lncRNA","Zm00001d052630_T001","Zm00001d052630","sp|Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140 OS=Arabidopsis thaliana GN=At3g49140 PE=1 SV=2//3.75859e-27",0.956621388296,1.12452311152E-6]
["LNC_003804","XLOC_038593","lncRNA","Zm00001d044327_T002","Zm00001d044327","sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1//1.10974e-18",0.969358881796,2.02052630627e-07]
["LNC_003804","XLOC_038593","lncRNA","Zm00001d038842_T001","Zm00001d038842","sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1//7.85706e-100",0.975156557738,7.14893866327e-08]
["LNC_003804","XLOC_038593","lncRNA","Zm00001d003430_T001","Zm00001d003430","sp|Q9M876|SYYM_ARATH Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=EMB2768 PE=2 SV=1//0",0.978013974573,3.89944867507e-08]
["LNC_003881","XLOC_039402","lncRNA","Zm00001d004894_T001","Zm00001d004894","sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1//7.95219e-120",0.958654508826,8.87619076018e-07]
["LNC_002337","XLOC_023093","lncRNA","Zm00001d031872_T001","Zm00001d031872","sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic OS=Arabidopsis thaliana GN=RNE PE=1 SV=1//6.37225e-87",0.98338577937,9.69586277932e-09]
["LNC_002337","XLOC_023093","lncRNA","Zm00001d042005_T003","Zm00001d042005","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//1.1026e-27",0.95376177337,1.53989202056e-06]
["LNC_002333","XLOC_023059","lncRNA","Zm00001d038448_T001","Zm00001d038448","sp|Q9LYN0|PR1B1_ARATH PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1//3.90904e-43",0.952702987821,1.72136398779E-6]
["LNC_004418","XLOC_044310","lncRNA","Zm00001d042526_T003","Zm00001d042526","sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1//7.94753e-07",0.964103830778,4.41905595672e-07]
["LNC_004418","XLOC_044310","lncRNA","Zm00001d040804_T003","Zm00001d040804","sp|Q9SRY4|LPA1_ARATH Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1//1.15057e-17",0.993926984763,6.43978204096E-11]
["LNC_004418","XLOC_044310","lncRNA","Zm00001d006620_T001","Zm00001d006620","sp|Q8GZ79|TI201_ARATH Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1//1.1456e-48",0.979011276051,3.09690282307e-08]
["LNC_004418","XLOC_044310","lncRNA","Zm00001d015400_T003","Zm00001d015400","sp|A4SML8|RLMI_AERS4 Ribosomal RNA large subunit methyltransferase I OS=Aeromonas salmonicida (strain A449) GN=rlmI PE=3 SV=1//4.68542e-09",0.972772744029,1.12579512823E-7]
["LNC_004418","XLOC_044310","lncRNA","Zm00001d030588_T001","Zm00001d030588",null,-0.954690738109,1.39348940428e-06]
["LNC_004418","XLOC_044310","lncRNA","Zm00001d012168_T001","Zm00001d012168","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//7.37537e-20",0.989543041013,9.67594671053e-10]
["LNC_003323","XLOC_033049","lncRNA","Zm00001d047786_T001","Zm00001d047786","sp|Q42410|ZAT12_ARATH Zinc finger protein ZAT12 OS=Arabidopsis thaliana GN=ZAT12 PE=2 SV=1//4.14048e-21",0.967770373603,2.59450253726e-07]
["LNC_005839","XLOC_058285","lncRNA","Zm00001d047385_T006","Zm00001d047385","sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1//6.85971e-37",0.967831530579,2.57024514561E-7]
["LNC_004416","XLOC_044260","lncRNA","Zm00001d029377_T001","Zm00001d029377",null,0.952441282948,1.7687315701e-06]
["LNC_006178","XLOC_061593","lncRNA","Zm00001d049867_T001","Zm00001d049867",null,0.989198089852,1.13741394081e-09]
["LNC_006178","XLOC_061593","lncRNA","Zm00001d036340_T001","Zm00001d036340","sp|Q5Z5A8|P2SAF_ORYSJ Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. japonica GN=HCF136 PE=3 SV=1//0",0.977511356888,4.36233413836e-08]
["LNC_006178","XLOC_061593","lncRNA","Zm00001d033837_T003","Zm00001d033837","sp|Q55CU8|RSC5_DICDI Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1//9.00525e-28",0.961236582978,6.45793967191e-07]
["LNC_006178","XLOC_061593","lncRNA","Zm00001d025542_T002","Zm00001d025542","sp|Q641Z5|CHAC2_RAT Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1//3.33493e-30",0.991783178058,2.90946378101e-10]
["LNC_001241","XLOC_012297","lncRNA","Zm00001d000193_T001","Zm00001d000193",null,0.978944627104,3.14603432194e-08]
["LNC_006179","XLOC_061596","lncRNA","Zm00001d016863_T001","Zm00001d016863","sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1//2.28676e-94",0.993504411904,9.00814978166e-11]
["LNC_006179","XLOC_061596","lncRNA","Zm00001d049785_T003","Zm00001d049785","sp|Q84W55|IP5PF_ARATH Type II inositol polyphosphate 5-phosphatase 15 OS=Arabidopsis thaliana GN=IP5P15 PE=1 SV=2//0",0.982084503868,1.41053109193e-08]
["LNC_006179","XLOC_061596","lncRNA","Zm00001d017676_T001","Zm00001d017676","sp|Q9C5C4|ARGE_ARATH Acetylornithine deacetylase OS=Arabidopsis thaliana GN=At4g17830 PE=2 SV=1//0",0.953414592321,1.59763701602e-06]
["LNC_006179","XLOC_061596","lncRNA","Zm00001d011467_T001","Zm00001d011467",null,0.988567984931,1.50859147396E-9]
["LNC_006179","XLOC_061596","lncRNA","Zm00001d010054_T001","Zm00001d010054","sp|Q0PGJ6|AKRC9_ARATH Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1//3.03466e-29",0.969694767716,1.91326671839e-07]
["LNC_004864","XLOC_048835","lncRNA","Zm00001d032881_T001","Zm00001d032881","sp|Q4PR40|EXP28_ORYSJ Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2//1.60641e-106",0.966037209603,3.36142998991e-07]
["LNC_006126","XLOC_060850","lncRNA","Zm00001d021741_T010","Zm00001d021741","sp|B9FXV5|IF4G_ORYSJ Eukaryotic translation initiation factor 4G OS=Oryza sativa subsp. japonica GN=Os07g0555200 PE=2 SV=2//0",0.980790733072,1.99457006467e-08]
["LNC_006126","XLOC_060850","lncRNA","Zm00001d028916_T001","Zm00001d028916","sp|O80482|BH149_ARATH Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149 PE=1 SV=1//1.72929e-14",0.983386777236,9.69296776177e-09]
["LNC_006126","XLOC_060850","lncRNA","Zm00001d051502_T008","Zm00001d051502","sp|Q38872|CDPK6_ARATH Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1//8.82276e-45",0.95066787353,2.11764299118e-06]
["LNC_006125","XLOC_060848","lncRNA","Zm00001d029133_T002","Zm00001d029133","sp|Q10LJ0|NCBP1_ORYSJ Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp. japonica GN=ABH1 PE=2 SV=1//1.26461e-16",0.971980972025,1.29755605371e-07]
["LNC_006129","XLOC_060879","lncRNA","Zm00001d019218_T001","Zm00001d019218","sp|Q8H2J9|GPDA_ORYSJ Glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0229800 PE=2 SV=3//0",0.971086875766,1.51593877673E-7]
["LNC_006129","XLOC_060879","lncRNA","Zm00001d047462_T001","Zm00001d047462","sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana GN=RPL6 PE=2 SV=1//6.12512e-98",0.987403726478,2.44524045456e-09]
["LNC_006129","XLOC_060879","lncRNA","Zm00001d034768_T002","Zm00001d034768","sp|Q9LIN3|RZ1A_ARATH Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana GN=RZ1A PE=1 SV=1//1.82099e-41",0.952596160913,1.74057609836E-6]
["LNC_005586","XLOC_055717","lncRNA","Zm00001d007228_T001","Zm00001d007228","sp|P48622|FAD3D_ARATH Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1//0",0.982297352543,1.32918271945E-8]
["LNC_001599","XLOC_015371","lncRNA","Zm00001d023887_T001","Zm00001d023887","sp|P02902|ACP1_HORVU Acyl carrier protein 1, chloroplastic OS=Hordeum vulgare GN=ACL1.1 PE=1 SV=2//2.46391e-55",0.969762522288,1.89219047098E-7]
["LNC_001599","XLOC_015371","lncRNA","Zm00001d042438_T001","Zm00001d042438","sp|P92961|PROT1_ARATH Proline transporter 1 OS=Arabidopsis thaliana GN=PROT1 PE=1 SV=1//2.18496e-106",0.957625707791,1.00193932506e-06]
["LNC_005330","XLOC_053540","lncRNA","Zm00001d002682_T002","Zm00001d002682","sp|Q7XUR3|FUCO1_ORYSJ Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica GN=Os04g0560400 PE=3 SV=2//2.35084e-55",0.966379274164,3.19737437415e-07]
["LNC_005330","XLOC_053540","lncRNA","Zm00001d002451_T001","Zm00001d002451",null,0.957226895787,1.04927558642E-6]
["LNC_003036","XLOC_030207","lncRNA","Zm00001d003142_T001","Zm00001d003142","sp|Q43255|C71C2_MAIZE indolin-2-one monooxygenase OS=Zea mays GN=CYP71C2 PE=1 SV=1//4.44545e-157",0.962525367177,5.46534044688e-07]
["LNC_005057","XLOC_050695","lncRNA","Zm00001d000055_T001","Zm00001d000055","sp|Q9ZPS9|BRL2_ARATH Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1//0",0.963584116388,4.74418719865e-07]
["LNC_005057","XLOC_050695","lncRNA","Zm00001d044982_T009","Zm00001d044982","sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1//2.3018e-105",0.975334921519,6.89803760778e-08]
["LNC_005057","XLOC_050695","lncRNA","Zm00001d029607_T001","Zm00001d029607","sp|Q75I13|SHR2_ORYSJ Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1//0",0.961413674311,6.31365636661e-07]
["LNC_005057","XLOC_050695","lncRNA","Zm00001d020536_T001","Zm00001d020536","sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1//1.86047e-43",0.986576219686,3.35647465377e-09]
["LNC_005057","XLOC_050695","lncRNA","Zm00001d039144_T002","Zm00001d039144","sp|Q96PB1|CASD1_HUMAN CAS1 domain-containing protein 1 OS=Homo sapiens GN=CASD1 PE=2 SV=1//1.82371e-53",0.956137433038,1.18769289648E-6]
["LNC_002614","XLOC_025736","lncRNA","Zm00001d030759_T001","Zm00001d030759","sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=2 SV=1//0",0.950894583637,2.07022609633e-06]
["LNC_001045","XLOC_010514","lncRNA","Zm00001d026382_T001","Zm00001d026382","sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=2 SV=1//1.19642e-12",0.957669971919,9.96791861718e-07]
["LNC_001040","XLOC_010465","lncRNA","Zm00001d002418_T023","Zm00001d002418","sp|Q9P6P3|PPK15_SCHPO Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk15 PE=1 SV=1//1.8535e-88",0.966962988217,2.93217431668e-07]
["LNC_001042","XLOC_010481","lncRNA","Zm00001d003127_T018","Zm00001d003127","sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1//8.66602e-53",0.995437993183,1.54427581833e-11]
["LNC_001042","XLOC_010481","lncRNA","Zm00001d014138_T004","Zm00001d014138","sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1//6.89102e-11",0.951735866043,1.90157647828E-6]
["LNC_001049","XLOC_010536","lncRNA","Zm00001d048319_T005","Zm00001d048319","sp|Q8S7W0|CSLA4_ORYSJ Probable mannan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLA4 PE=2 SV=1//0",0.993167410814,1.15937925926E-10]
["LNC_001049","XLOC_010536","lncRNA","Zm00001d053872_T023","Zm00001d053872","sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1//0",0.999900573063,0]
["LNC_001048","XLOC_010536","lncRNA","Zm00001d030117_T006","Zm00001d030117","sp|Q39639|PLSB_CUCSA Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis sativus PE=2 SV=1//2.70859e-08",0.953039536251,1.66193528939e-06]
["LNC_002619","XLOC_025796","lncRNA","Zm00001d010945_T002","Zm00001d010945","sp|Q9FNE1|CRK42_ARATH Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1//4.01482e-13",0.952706064894,1.72081310046e-06]
["LNC_002925","XLOC_028907","lncRNA","Zm00001d039991_T001","Zm00001d039991",null,0.961277134859,6.42467149481e-07]
["LNC_005055","XLOC_050685","lncRNA","Zm00001d036530_T015","Zm00001d036530","sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2 OS=Arabidopsis thaliana GN=ARL2 PE=2 SV=1//6.93023e-24",0.956520577857,1.13745641928E-6]
["LNC_005055","XLOC_050685","lncRNA","Zm00001d029715_T001","Zm00001d029715","sp|P23106|XYLF_PSEPU 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas putida GN=xylF PE=1 SV=1//1.03013e-09",0.99230212673,2.10147454993e-10]
["LNC_002630","XLOC_025968","lncRNA","Zm00001d028513_T004","Zm00001d028513","sp|A6QPH1|WIBG_BOVIN Partner of Y14 and mago OS=Bos taurus GN=WIBG PE=2 SV=1//3.38029e-11",0.96521924066,3.78096481679E-7]
["LNC_004965","XLOC_049703","lncRNA","Zm00001d028451_T001","Zm00001d028451",null,0.954041389611,1.49459962273e-06]
["LNC_000406","XLOC_004349","lncRNA","Zm00001d015220_T001","Zm00001d015220","sp|D9J101|OMT8_MAIZE Benzoate O-methyltransferase OS=Zea mays GN=OMT8 PE=1 SV=1//9.46581e-20",0.960086232212,7.46022720932e-07]
["LNC_000406","XLOC_004349","lncRNA","Zm00001d030051_T001","Zm00001d030051",null,0.960906891404,6.73352570812e-07]
["LNC_000400","XLOC_004312","lncRNA","Zm00001d020348_T003","Zm00001d020348",null,0.966538074707,3.12341088105e-07]
["LNC_003675","XLOC_036930","lncRNA","Zm00001d049033_T001","Zm00001d049033","sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=2 SV=1//9.7054e-16",0.963277845045,4.94451316335e-07]
["LNC_003697","XLOC_037314","lncRNA","Zm00001d021871_T001","Zm00001d021871","sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1//0",0.950061460382,2.248719984e-06]
["LNC_003697","XLOC_037314","lncRNA","Zm00001d037613_T001","Zm00001d037613",null,0.958346693175,9.20676166416e-07]
["LNC_003697","XLOC_037314","lncRNA","Zm00001d047603_T004","Zm00001d047603","sp|P0AB89|PUR8_ECOLI Adenylosuccinate lyase OS=Escherichia coli (strain K12) GN=purB PE=1 SV=1//4.93593e-08",0.9635121747,4.79065228376e-07]
["LNC_003697","XLOC_037314","lncRNA","Zm00001d011513_T001","Zm00001d011513","sp|O22386|RK12_ORYSJ 50S ribosomal protein L12, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL12-2 PE=2 SV=2//1.74381e-48",0.967642548118,2.64579163911e-07]
["LNC_003697","XLOC_037314","lncRNA","Zm00001d018365_T013","Zm00001d018365","sp|Q9SUH5|QWRF8_ARATH QWRF motif-containing protein 8 OS=Arabidopsis thaliana GN=QWRF8 PE=2 SV=1//1.49282e-11",-0.964466001835,4.20315220257e-07]
["LNC_003694","XLOC_037275","lncRNA","Zm00001d047901_T001","Zm00001d047901",null,0.953116241598,1.64862108587e-06]
["LNC_003693","XLOC_037271","lncRNA","Zm00001d038285_T001","Zm00001d038285","sp|Q9FMC8|OPF13_ARATH Transcription repressor OFP13 OS=Arabidopsis thaliana GN=OFP13 PE=2 SV=1//1.9794e-23",0.963494113047,4.80237440925e-07]
["LNC_003693","XLOC_037271","lncRNA","Zm00001d024537_T001","Zm00001d024537","sp|O82166|AHL21_ARATH AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana GN=AHL21 PE=2 SV=1//3.33208e-40",-0.956004681611,1.20550368531e-06]
["LNC_003690","XLOC_037224","lncRNA","Zm00001d049708_T008","Zm00001d049708","sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3//9.08881e-54",-0.956602431578,1.12694617425E-6]
["LNC_005228","XLOC_052311","lncRNA","GRMZM5G845024_T01","GRMZM5G845024",null,0.959475517902,8.04038557067e-07]
["LNC_005226","XLOC_052274","lncRNA","Zm00001d027557_T003","Zm00001d027557","sp|Q9FUS8|GSTUH_ARATH Glutathione S-transferase U17 OS=Arabidopsis thaliana GN=GSTU17 PE=2 SV=1//1.44042e-54",0.995463997538,1.50084389361e-11]
["LNC_001216","XLOC_012049","lncRNA","Zm00001d016134_T002","Zm00001d016134","sp|Q69S39|UCRIA_ORYSJ Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1//6.47087e-133",0.96254269648,5.45287527132e-07]
["LNC_001216","XLOC_012049","lncRNA","Zm00001d007858_T001","Zm00001d007858","sp|Q94A68|Y1669_ARATH Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=2 SV=1//0",0.968084475163,2.47182578628e-07]
["LNC_000319","XLOC_003331","lncRNA","Zm00001d000021_T001","Zm00001d000021","sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2//0",0.95958916899,7.92979508502e-07]
["LNC_000312","XLOC_003250","lncRNA","Zm00001d006466_T001","Zm00001d006466","sp|P36774|LON2_MYXXA Lon protease 2 OS=Myxococcus xanthus GN=lon2 PE=1 SV=3//5.47204e-08",0.96312516531,5.04685784275e-07]
["LNC_002924","XLOC_028907","lncRNA","Zm00001d028338_T001","Zm00001d028338",null,0.95262870719,1.73470493969e-06]
["LNC_000316","XLOC_003315","lncRNA","Zm00001d028712_T013","Zm00001d028712","sp|Q9SA96|AROD1_ARATH Arogenate dehydratase/prephenate dehydratase 1, chloroplastic OS=Arabidopsis thaliana GN=ADT1 PE=1 SV=1//6.23092e-22",0.958563794934,8.97261445809e-07]
["LNC_000316","XLOC_003315","lncRNA","Zm00001d015426_T001","Zm00001d015426","sp|P09469|VATA_DAUCA V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1//0",0.955498758902,1.27533526939E-6]
["LNC_000316","XLOC_003315","lncRNA","Zm00001d037778_T001","Zm00001d037778","sp|Q55911|YC52L_SYNY3 Uncharacterized N-acetyltransferase ycf52-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0286 PE=3 SV=1//1.33342e-10",0.952823061281,1.69997080413e-06]
["LNC_000316","XLOC_003315","lncRNA","Zm00001d044327_T002","Zm00001d044327","sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1//1.10974e-18",0.985034878696,5.76485881254e-09]
["LNC_000316","XLOC_003315","lncRNA","Zm00001d043707_T001","Zm00001d043707","sp|Q8VZV9|PTA7_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1//3.44218e-35",0.955667871342,1.25164505693E-6]
["LNC_002921","XLOC_028869","lncRNA","Zm00001d008635_T001","Zm00001d008635","sp|Q9FG13|CXE15_ARATH Probable carboxylesterase 15 OS=Arabidopsis thaliana GN=CXE15 PE=2 SV=1//1.99452e-65",0.970950426117,1.55169197935E-7]
["LNC_003165","XLOC_031522","lncRNA","Zm00001d012893_T001","Zm00001d012893","sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1//0",0.957217251812,1.05044184795E-6]
["LNC_005593","XLOC_055819","lncRNA","Zm00001d013713_T002","Zm00001d013713","sp|Q9CWD8|NUBPL_MOUSE Iron-sulfur protein NUBPL OS=Mus musculus GN=Nubpl PE=2 SV=2//2.30883e-71",0.957419616563,1.02618427356E-6]
["LNC_005590","XLOC_055763","lncRNA","Zm00001d017264_T001","Zm00001d017264","sp|Q9LMN7|WAK5_ARATH Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1//5.43199e-159",0.959127009121,8.38716868179e-07]
["LNC_005354","XLOC_054003","lncRNA","Zm00001d013706_T001","Zm00001d013706","sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1//5.30488e-17",0.961977354903,5.87137037655e-07]
["LNC_005354","XLOC_054003","lncRNA","Zm00001d000164_T001","Zm00001d000164","sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1//0",0.967893720696,2.54576334235e-07]
["LNC_005354","XLOC_054003","lncRNA","Zm00001d030786_T002","Zm00001d030786",null,0.980786524546,1.99674186074e-08]
["LNC_005354","XLOC_054003","lncRNA","Zm00001d002147_T002","Zm00001d002147","sp|P94479|YNBB_BACSU Uncharacterized protein YnbB OS=Bacillus subtilis (strain 168) GN=ynbB PE=4 SV=2//1.79105e-110",0.963731893804,4.64986573689e-07]
["LNC_002813","XLOC_028039","lncRNA","Zm00001d048059_T001","Zm00001d048059","sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1//2.11216e-30",0.978006545598,3.90599237399e-08]
["LNC_002816","XLOC_028079","lncRNA","Zm00001d022017_T001","Zm00001d022017","sp|Q0D4Z6|GH38_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1//0",0.953280294431,1.62042947838e-06]
["LNC_002657","XLOC_026194","lncRNA","Zm00001d021246_T002","Zm00001d021246","sp|Q9LNK1|RABA3_ARATH Ras-related protein RABA3 OS=Arabidopsis thaliana GN=RABA3 PE=2 SV=1//3.36492e-77",0.958987942004,8.5288180296e-07]
["LNC_002657","XLOC_026194","lncRNA","Zm00001d026176_T008","Zm00001d026176","sp|Q9UKL6|PPCT_HUMAN Phosphatidylcholine transfer protein OS=Homo sapiens GN=PCTP PE=1 SV=1//8.07869e-07",0.957263540312,1.04485347596e-06]
["LNC_004770","XLOC_047656","lncRNA","Zm00001d040920_T001","Zm00001d040920","sp|F6H2F8|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1 OS=Vitis vinifera GN=VIT_19s0014g03930 PE=3 SV=1//1.34312e-78",0.950344469948,2.18676996777e-06]
["LNC_004771","XLOC_047686","lncRNA","Zm00001d007012_T001","Zm00001d007012","sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1//4.57336e-78",0.969128562677,2.09680007579e-07]
["LNC_004771","XLOC_047686","lncRNA","GRMZM5G899836_T01","GRMZM5G899836","sp|Q37082|YCF72_MAIZE Uncharacterized protein ycf72 OS=Zea mays GN=ycf72-1 PE=3 SV=1//2.58485e-79",0.970013752448,1.815647801e-07]
["LNC_004771","XLOC_047686","lncRNA","Zm00001d006593_T012","Zm00001d006593","sp|F4K0A6|MYO2_ARATH Myosin-2 OS=Arabidopsis thaliana GN=VIII-2 PE=2 SV=1//0",0.978049645294,3.86815017794e-08]
["LNC_004771","XLOC_047686","lncRNA","Zm00001d003725_T001","Zm00001d003725","sp|P68428|H32_WHEAT Histone H3.2 OS=Triticum aestivum PE=1 SV=2//1.31296e-78",0.97128553597,1.46506033527e-07]
["LNC_004776","XLOC_047779","lncRNA","Zm00001d046004_T001","Zm00001d046004",null,0.974646882425,7.90618728264e-08]
["LNC_005977","XLOC_059718","lncRNA","Zm00001d042793_T001","Zm00001d042793","sp|Q8WUA4|TF3C2_HUMAN General transcription factor 3C polypeptide 2 OS=Homo sapiens GN=GTF3C2 PE=1 SV=2//2.45519e-09",0.976677278093,5.22624543642e-08]
["LNC_004177","XLOC_042160","lncRNA","Zm00001d036700_T001","Zm00001d036700","sp|B6U769|CSPLD_MAIZE CASP-like protein 2C1 OS=Zea mays PE=2 SV=1//4.43743e-44",0.96631063221,3.22977330658e-07]
["LNC_004177","XLOC_042160","lncRNA","Zm00001d041653_T001","Zm00001d041653","sp|Q9FLV9|SLAH3_ARATH S-type anion channel SLAH3 OS=Arabidopsis thaliana GN=SLAH3 PE=1 SV=1//3.18543e-160",0.962910003983,5.19393648979e-07]
["LNC_004178","XLOC_042172","lncRNA","Zm00001d047522_T002","Zm00001d047522","sp|P93026|VSR1_ARATH Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2//0",-0.95264109078,1.73247514325e-06]
["LNC_004178","XLOC_042172","lncRNA","Zm00001d037775_T004","Zm00001d037775","sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=1 SV=1//2.99974e-20",0.950556442089,2.14126263143e-06]
["LNC_002793","XLOC_027803","lncRNA","Zm00001d011601_T032","Zm00001d011601","sp|Q4VCM1|LCAT2_ARATH Phospholipid--sterol O-acyltransferase OS=Arabidopsis thaliana GN=PSAT PE=2 SV=2//1.52605e-18",0.95205156957,1.84117875013e-06]
["LNC_002793","XLOC_027803","lncRNA","Zm00001d024832_T002","Zm00001d024832","sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana GN=NHX2 PE=2 SV=2//7.4168e-07",0.95546433032,1.28020152701E-6]
["LNC_003518","XLOC_035362","lncRNA","Zm00001d008645_T002","Zm00001d008645","sp|O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1//1.1528e-33",0.957586889796,1.00647081069E-6]
["LNC_003510","XLOC_035263","lncRNA","Zm00001d043598_T009","Zm00001d043598","sp|Q7FMW4|AB38G_ORYSJ ABC transporter G family member 38 OS=Oryza sativa subsp. japonica GN=ABCG38 PE=3 SV=1//1.73556e-27",0.962153188248,5.7385673502e-07]
["LNC_003512","XLOC_035278","lncRNA","Zm00001d004667_T044","Zm00001d004667","sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF OS=Arabidopsis thaliana GN=CEF PE=2 SV=3//1.47043e-12",0.966225874767,3.27013841339e-07]
["LNC_005775","XLOC_057750","lncRNA","Zm00001d038620_T001","Zm00001d038620","sp|Q9LHN4|LPAT5_ARATH Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=LPAT5 PE=2 SV=1//9.55761e-141",0.977668835475,4.21283536944e-08]
["LNC_005774","XLOC_057722","lncRNA","Zm00001d019221_T001","Zm00001d019221","sp|Q93XW5|NSP5_ARATH Nitrile-specifier protein 5 OS=Arabidopsis thaliana GN=NSP5 PE=2 SV=1//9.09577e-104",0.97369624084,9.48864977701e-08]
["LNC_004085","XLOC_041335","lncRNA","Zm00001d038118_T001","Zm00001d038118","sp|Q39089|PAC_ARATH Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana GN=PAC PE=2 SV=1//2.53818e-06",0.95664024974,1.12211633363e-06]
["LNC_005571","XLOC_055630","lncRNA","Zm00001d032267_T001","Zm00001d032267","sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1//2.0141e-43",0.991068134683,4.41047420807e-10]
["LNC_005571","XLOC_055630","lncRNA","Zm00001d026022_T006","Zm00001d026022","sp|Q6NU91|NOC4B_XENLA Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-b PE=2 SV=1//3.85326e-21",0.999980218836,0]
["LNC_005571","XLOC_055630","lncRNA","Zm00001d034492_T004","Zm00001d034492","sp|Q7X659|VP35A_ARATH Vacuolar protein sorting-associated protein 35A OS=Arabidopsis thaliana GN=VPS35A PE=1 SV=1//1.28726e-09",0.999978772394,0]
["LNC_006029","XLOC_060066","lncRNA","Zm00001d000430_T001","Zm00001d000430","sp|Q67UQ7|MRS2B_ORYSJ Magnesium transporter MRS2-B OS=Oryza sativa subsp. japonica GN=MRS2-B PE=2 SV=1//0",0.972178392485,1.2528997817e-07]
["LNC_006029","XLOC_060066","lncRNA","Zm00001d025340_T003","Zm00001d025340","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//4.39237e-36",0.954474363387,1.42655822888E-6]
["LNC_006029","XLOC_060066","lncRNA","Zm00001d028153_T003","Zm00001d028153","sp|Q9M4Y3|RR10_MESCR 30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS10 PE=2 SV=1//8.06612e-63",0.979836665275,2.53753096313e-08]
["LNC_006029","XLOC_060066","lncRNA","Zm00001d012998_T001","Zm00001d012998","sp|O80363|RK17_TOBAC 50S ribosomal protein L17, chloroplastic OS=Nicotiana tabacum GN=RPL17 PE=2 SV=1//1.46577e-80",0.97889760827,3.18106734287e-08]
["LNC_006022","XLOC_060000","lncRNA","Zm00001d034715_T001","Zm00001d034715",null,0.960200316523,7.3556382274e-07]
["LNC_006022","XLOC_060000","lncRNA","Zm00001d047506_T006","Zm00001d047506","sp|Q9AYT5|RSH1_ORYSJ Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica GN=RSH1 PE=2 SV=1//2.11781e-118",0.963569336957,4.75370344866E-7]
["LNC_002035","XLOC_019943","lncRNA","Zm00001d015964_T001","Zm00001d015964","sp|Q8RWF5|MATE9_ARATH MATE efflux family protein 9 OS=Arabidopsis thaliana GN=DTXL5 PE=2 SV=1//1.35516e-81",0.962100688277,5.77796679613e-07]
["LNC_003205","XLOC_031894","lncRNA","Zm00001d048599_T003","Zm00001d048599","sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2//1.50273e-38",0.963165673512,5.01954168453e-07]
["LNC_003204","XLOC_031893","lncRNA","Zm00001d023904_T003","Zm00001d023904","sp|P33488|ABP4_MAIZE Auxin-binding protein 4 OS=Zea mays GN=ABP4 PE=2 SV=1//3.00139e-99",-0.950511000692,2.15095440451e-06]
["LNC_003206","XLOC_031900","lncRNA","Zm00001d021806_T035","Zm00001d021806","sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2//3.36588e-77",0.964200662706,4.36048679164e-07]
["LNC_003206","XLOC_031900","lncRNA","Zm00001d025165_T004","Zm00001d025165","sp|O94260|G3BP_SCHPO Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nxt3 PE=1 SV=1//2.30566e-10",0.99115754756,4.1947201268E-10]
["LNC_000891","XLOC_009235","lncRNA","Zm00001d034253_T001","Zm00001d034253","sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1//0",0.950354557829,2.18458701506e-06]
["LNC_004088","XLOC_041394","lncRNA","Zm00001d000229_T001","Zm00001d000229",null,0.966110977599,3.32549687121e-07]
["LNC_004088","XLOC_041394","lncRNA","Zm00001d002421_T001","Zm00001d002421","sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1//2.77509e-37",0.955606202056,1.2602432089e-06]
["LNC_004088","XLOC_041394","lncRNA","Zm00001d013795_T002","Zm00001d013795","sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3//2.30183e-18",0.951923663099,1.86546250514e-06]
["LNC_004088","XLOC_041394","lncRNA","Zm00001d045938_T005","Zm00001d045938",null,0.971926413132,1.31011798743e-07]
["LNC_004793","XLOC_047921","lncRNA","Zm00001d005300_T001","Zm00001d005300","sp|Q9FDW1|MYB44_ARATH Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1//3.43701e-55",0.957208950319,1.05144658513E-6]
["LNC_004790","XLOC_047875","lncRNA","Zm00001d053008_T001","Zm00001d053008",null,0.963090394084,5.0703994714e-07]
["LNC_004089","XLOC_041394","lncRNA","Zm00001d038946_T002","Zm00001d038946","sp|Q9LU21|PNSB3_ARATH Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana GN=PNSB3 PE=2 SV=1//7.94586e-27",0.980143050903,2.35172010754E-8]
["LNC_004089","XLOC_041394","lncRNA","Zm00001d004358_T003","Zm00001d004358","sp|Q7XS75|Y4469_ORYSJ Putative B3 domain-containing protein Os04g0346900 OS=Oryza sativa subsp. japonica GN=Os04g0346900 PE=3 SV=2//5.77665e-13",0.979055224268,3.06484162493e-08]
["LNC_004794","XLOC_047923","lncRNA","Zm00001d033884_T001","Zm00001d033884","sp|O23305|Y4449_ARATH FHA domain-containing protein At4g14490 OS=Arabidopsis thaliana GN=At4g14490 PE=1 SV=1//5.26912e-18",0.961517911252,6.2299357495e-07]
["LNC_001693","XLOC_016458","lncRNA","Zm00001d037336_T001","Zm00001d037336","sp|Q9FHQ1|GDL80_ARATH GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1//2.53343e-136",0.987895291626,2.00558147867e-09]
["LNC_001696","XLOC_016521","lncRNA","Zm00001d027694_T001","Zm00001d027694","sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment) OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1//0",0.960421625655,7.15607152646e-07]
["LNC_001696","XLOC_016521","lncRNA","Zm00001d044272_T001","Zm00001d044272","sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana GN=BHLH41 PE=3 SV=1//9.35394e-18",-0.973047822191,1.07055871349e-07]
["LNC_001696","XLOC_016521","lncRNA","Zm00001d002128_T002","Zm00001d002128","sp|Q7X7H9|SK3_ORYSJ Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=SK3 PE=1 SV=2//1.89185e-84",-0.962252240455,5.66481360332E-7]
["LNC_001696","XLOC_016521","lncRNA","Zm00001d036396_T001","Zm00001d036396","sp|Q5Z8P2|PUS2_ORYSJ RNA pseudouridine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0717400 PE=2 SV=1//8.52379e-09",0.966180339845,3.29198915683e-07]
["LNC_001696","XLOC_016521","lncRNA","Zm00001d015932_T001","Zm00001d015932","sp|Q94C32|MRG1_ARATH Protein MRG1 OS=Arabidopsis thaliana GN=MRG1 PE=1 SV=1//3.6955e-61",0.954823440457,1.37351129981e-06]
["LNC_001696","XLOC_016521","lncRNA","Zm00001d051851_T005","Zm00001d051851","sp|Q0J9V5|CXXS1_ORYSJ Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 PE=2 SV=1//1.57678e-13",0.952307078966,1.7934197829e-06]
["LNC_001698","XLOC_016574","lncRNA","Zm00001d004478_T002","Zm00001d004478","sp|Q0JJS8|HF101_ORYSJ Fe-S cluster assembly factor HCF101, chloroplastic OS=Oryza sativa subsp. japonica GN=HCF101 PE=3 SV=3//0",0.959710508902,7.81306007891e-07]
["LNC_001455","XLOC_014547","lncRNA","Zm00001d037393_T004","Zm00001d037393","sp|Q9LJX0|AB19B_ARATH ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1//1.35696e-28",0.961400031776,6.32467955342e-07]
["LNC_002329","XLOC_022988","lncRNA","Zm00001d013741_T008","Zm00001d013741","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//3.51416e-154",0.956367457963,1.157326319E-6]
["LNC_002328","XLOC_022956","lncRNA","Zm00001d021390_T001","Zm00001d021390","sp|Q653S3|P2C70_ORYSJ Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2//3.31395e-69",0.950821723225,2.08537221313e-06]
["LNC_003333","XLOC_033167","lncRNA","Zm00001d025695_T001","Zm00001d025695","sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1//0",0.95354981615,1.57494516717e-06]
["LNC_004424","XLOC_044382","lncRNA","Zm00001d031258_T005","Zm00001d031258","sp|Q39061|CP33_ARATH RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1//7.16133e-25",0.969042973511,2.12572107916e-07]
["LNC_004424","XLOC_044382","lncRNA","Zm00001d039070_T001","Zm00001d039070",null,0.964221755805,4.34781080028e-07]
["LNC_004424","XLOC_044382","lncRNA","Zm00001d006795_T001","Zm00001d006795","sp|Q8GT20|BEBT_TOBAC Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1//5.53321e-113",0.963053810314,5.09526241643e-07]
["LNC_004422","XLOC_044382","lncRNA","Zm00001d013507_T001","Zm00001d013507","sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1//0",0.96222651743,5.68389399103e-07]
["LNC_004422","XLOC_044382","lncRNA","Zm00001d039096_T001","Zm00001d039096","sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=3 SV=1//0",0.968718597929,2.23822392842e-07]
["LNC_004422","XLOC_044382","lncRNA","Zm00001d040855_T001","Zm00001d040855",null,0.973439157229,9.95718556496E-8]
["LNC_004422","XLOC_044382","lncRNA","Zm00001d011069_T006","Zm00001d011069","sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1//5.73668e-136",0.96282364044,5.25392166661e-07]
["LNC_004422","XLOC_044382","lncRNA","Zm00001d018936_T001","Zm00001d018936","sp|Q9S726|RPI3_ARATH Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana GN=RPI3 PE=1 SV=1//5.08234e-118",0.958459384035,9.08462515214e-07]
["LNC_004422","XLOC_044382","lncRNA","GRMZM5G836994_T01","GRMZM5G836994","sp|P48190|MATK_MAIZE Maturase K OS=Zea mays GN=matK PE=3 SV=3//0",0.959015121493,8.50098557104e-07]
["LNC_004422","XLOC_044382","lncRNA","Zm00001d018077_T002","Zm00001d018077","sp|Q9SCY3|PNSL4_ARATH Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana GN=PNSL4 PE=1 SV=1//4.59223e-59",0.953016850484,1.66588929451e-06]
["LNC_004423","XLOC_044382","lncRNA","Zm00001d011034_T001","Zm00001d011034","sp|Q9FRL8|DHAR2_ARATH Glutathione S-transferase DHAR2 OS=Arabidopsis thaliana GN=DHAR2 PE=1 SV=1//6.93402e-37",0.954339887398,1.44742211261e-06]
["LNC_004423","XLOC_044382","lncRNA","Zm00001d049650_T001","Zm00001d049650","sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2//1.53721e-10",0.972174086367,1.25386057981E-7]
["LNC_004423","XLOC_044382","lncRNA","Zm00001d014253_T001","Zm00001d014253",null,0.972782272276,1.12384466622E-7]
["LNC_004423","XLOC_044382","lncRNA","Zm00001d026689_T007","Zm00001d026689","sp|C4LK80|BIOWF_CORK4 Biotin biosynthesis bifunctional protein BioWF OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=bioWF PE=3 SV=1//4.98548e-22",0.951430567772,1.96146795473e-06]
["LNC_004423","XLOC_044382","lncRNA","Zm00001d044327_T003","Zm00001d044327","sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1//1.10974e-18",0.981163649785,1.80946846395e-08]
["LNC_004423","XLOC_044382","lncRNA","Zm00001d017435_T001","Zm00001d017435",null,0.9954218834,1.57169832704E-11]
["LNC_000679","XLOC_007085","lncRNA","Zm00001d034702_T001","Zm00001d034702",null,0.984731586925,6.36995212133E-9]
["LNC_000678","XLOC_007084","lncRNA","Zm00001d038189_T004","Zm00001d038189","sp|Q05627|Y202_CLOB8 Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=Cbei_0202 PE=4 SV=2//1.25189e-34",0.975759778699,6.32858125904e-08]
["LNC_000678","XLOC_007084","lncRNA","Zm00001d035515_T001","Zm00001d035515","sp|Q83Q35|ALX_SHIFL Inner membrane protein alx OS=Shigella flexneri GN=alx PE=3 SV=1//1.64647e-14",0.97238717864,1.20701282968e-07]
["LNC_000678","XLOC_007084","lncRNA","Zm00001d046837_T002","Zm00001d046837",null,0.984612294809,6.62138899266e-09]
["LNC_000678","XLOC_007084","lncRNA","Zm00001d021242_T001","Zm00001d021242",null,0.980132263718,2.35807213755e-08]
["LNC_000678","XLOC_007084","lncRNA","Zm00001d020134_T008","Zm00001d020134","sp|A3BXL8|AB53G_ORYSJ ABC transporter G family member 53 OS=Oryza sativa subsp. japonica GN=ABCG53 PE=2 SV=1//1.36166e-27",0.957703629208,9.92891937779e-07]
["LNC_000670","XLOC_007020","lncRNA","Zm00001d018508_T001","Zm00001d018508","sp|Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana GN=AHL20 PE=2 SV=1//1.80086e-56",0.962547476041,5.44944125602e-07]
["LNC_006152","XLOC_061200","lncRNA","Zm00001d046786_T001","Zm00001d046786","sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1//2.55363e-143",0.95546686767,1.27984238674E-6]
["LNC_002251","XLOC_022254","lncRNA","Zm00001d014340_T011","Zm00001d014340","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//7.46477e-51",0.961121386889,6.55319221998E-7]
["LNC_003028","XLOC_030057","lncRNA","Zm00001d013647_T001","Zm00001d013647",null,0.979862789271,2.52124574551e-08]
["LNC_005914","XLOC_059090","lncRNA","Zm00001d023651_T001","Zm00001d023651","sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1//1.62409e-30",0.96851173209,2.31240978366E-7]
["LNC_005914","XLOC_059090","lncRNA","Zm00001d012238_T020","Zm00001d012238","sp|Q9M1S3|ARP1_ARATH Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=1//5.71543e-09",0.983559962709,9.20083964573e-09]
["LNC_001671","XLOC_016167","lncRNA","Zm00001d014286_T016","Zm00001d014286","sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1//7.18616e-15",0.967285008996,2.79354748667E-7]
["LNC_004957","XLOC_049649","lncRNA","Zm00001d025011_T001","Zm00001d025011",null,0.962866148618,5.22432851202e-07]
["LNC_004957","XLOC_049649","lncRNA","Zm00001d032644_T002","Zm00001d032644","sp|Q94KD3|VP52A_ARATH Vacuolar protein sorting-associated protein 52 A OS=Arabidopsis thaliana GN=VPS52 PE=1 SV=1//1.09543e-20",0.968337246874,2.3764926782E-7]
["LNC_004950","XLOC_049598","lncRNA","Zm00001d009929_T001","Zm00001d009929","sp|Q6ATY4|U603_ORYSJ UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1//3.93098e-118",0.968855812444,2.19007014746e-07]
["LNC_004950","XLOC_049598","lncRNA","Zm00001d043813_T002","Zm00001d043813","sp|Q54I39|IST1L_DICDI IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1//8.59591e-17",0.959002376319,8.51402794266e-07]
["LNC_002643","XLOC_026112","lncRNA","Zm00001d047392_T004","Zm00001d047392",null,0.954350883553,1.44570702854e-06]
["LNC_000414","XLOC_004520","lncRNA","Zm00001d030010_T001","Zm00001d030010",null,0.953397792066,1.60047427866e-06]
["LNC_000414","XLOC_004520","lncRNA","Zm00001d018152_T001","Zm00001d018152","sp|A1Y2B7|SGS3_MAIZE Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Zea mays GN=SGS3 PE=1 SV=1//1.58602e-151",0.9661022359,3.32973900896e-07]
["LNC_000414","XLOC_004520","lncRNA","Zm00001d008789_T020","Zm00001d008789",null,0.984674716282,6.48885212229e-09]
["LNC_005172","XLOC_051898","lncRNA","Zm00001d000270_T009","Zm00001d000270","sp|P16023|RPOB_MAIZE DNA-directed RNA polymerase subunit beta OS=Zea mays GN=rpoB PE=3 SV=1//0",0.971595486156,1.38840303698e-07]
["LNC_003395","XLOC_033919","lncRNA","Zm00001d038163_T013","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.974847166223,7.60135869804e-08]
["LNC_003689","XLOC_037222","lncRNA","Zm00001d047717_T030","Zm00001d047717","sp|P69735|RB3GP_RAT Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus GN=Rab3gap1 PE=1 SV=2//5.46365e-23",0.97069254877,1.62109395241E-7]
["LNC_003686","XLOC_037200","lncRNA","Zm00001d013164_T002","Zm00001d013164","sp|Q9M2Y9|RAX3_ARATH Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1//1.3541e-64",0.95321013619,1.63243859497E-6]
["LNC_003686","XLOC_037200","lncRNA","Zm00001d029862_T001","Zm00001d029862","sp|Q8H038|KATAM_ORYSJ Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1//2.29863e-64",0.983805416371,8.53770565357e-09]
["LNC_003686","XLOC_037200","lncRNA","Zm00001d039694_T001","Zm00001d039694","sp|Q9FML4|LOB_ARATH Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1//7.26449e-66",0.951829422936,1.8835165303e-06]
["LNC_005212","XLOC_052193","lncRNA","Zm00001d021775_T001","Zm00001d021775","sp|Q41144|STC_RICCO Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1//0",0.989227052141,1.122301585e-09]
["LNC_005215","XLOC_052216","lncRNA","Zm00001d011788_T001","Zm00001d011788","sp|Q9STK5|PP269_ARATH Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2 SV=1//3.49723e-150",0.952335885817,1.78809756379e-06]
["LNC_001205","XLOC_011952","lncRNA","Zm00001d013267_T020","Zm00001d013267","sp|Q39238|TSL_ARATH Serine/threonine-protein kinase TOUSLED OS=Arabidopsis thaliana GN=TOUSLED PE=1 SV=1//1.70987e-51",0.980248647912,2.29025685083E-8]
["LNC_005708","XLOC_057253","lncRNA","Zm00001d052444_T001","Zm00001d052444","sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana GN=HMGCL PE=1 SV=2//6.25095e-142",0.952179914131,1.81706455216E-6]
["LNC_000892","XLOC_009240","lncRNA","Zm00001d012812_T002","Zm00001d012812","sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2//8.1297e-87",0.95372621711,1.54572861977E-6]
["LNC_000892","XLOC_009240","lncRNA","Zm00001d052556_T001","Zm00001d052556","sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1//0",0.954820461727,1.37395723332E-6]
["LNC_000892","XLOC_009240","lncRNA","Zm00001d035092_T002","Zm00001d035092","sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1//3.96804e-27",0.971439845974,1.4264862469e-07]
["LNC_000182","XLOC_001986","lncRNA","Zm00001d047399_T001","Zm00001d047399","sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1//3.00235e-21",0.9527859731,1.70655606624E-6]
["LNC_002796","XLOC_027838","lncRNA","Zm00001d041861_T001","Zm00001d041861","sp|Q8VXZ7|AGAL3_ARATH Alpha-galactosidase 3 OS=Arabidopsis thaliana GN=AGAL3 PE=1 SV=1//3.51804e-94",0.956945904352,1.08368063878E-6]
["LNC_000894","XLOC_009241","lncRNA","Zm00001d037411_T001","Zm00001d037411","sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1//1.00147e-49",0.978368578475,3.59710983222e-08]
["LNC_000894","XLOC_009241","lncRNA","Zm00001d005080_T003","Zm00001d005080","sp|Q84K71|MATE2_ARATH MATE efflux family protein 2, chloroplastic OS=Arabidopsis thaliana GN=DTX44 PE=2 SV=1//2.53453e-10",0.977086317782,4.78703672258e-08]
["LNC_006227","XLOC_061854","lncRNA","Zm00001d034856_T002","Zm00001d034856","sp|Q9ZT91|EFTM_ARATH Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1//1.60839e-42",0.950078791073,2.24488680334e-06]
["LNC_003674","XLOC_036930","lncRNA","Zm00001d003707_T001","Zm00001d003707","sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1//2.54189e-140",0.955802058231,1.23309711197E-6]
["LNC_005430","XLOC_054641","lncRNA","Zm00001d044421_T001","Zm00001d044421","sp|A2WSD3|SWT6B_ORYSI Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica GN=SWEET6B PE=3 SV=1//8.85745e-129",0.964015022308,4.47332032305e-07]
["LNC_003642","XLOC_036512","lncRNA","Zm00001d036102_T001","Zm00001d036102",null,0.956861435189,1.09419634664E-6]
["LNC_003666","XLOC_036861","lncRNA","Zm00001d041653_T001","Zm00001d041653","sp|Q9FLV9|SLAH3_ARATH S-type anion channel SLAH3 OS=Arabidopsis thaliana GN=SLAH3 PE=1 SV=1//3.18543e-160",0.967336525158,2.77186268605e-07]
["LNC_003666","XLOC_036861","lncRNA","Zm00001d011076_T001","Zm00001d011076","sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1//1.71793e-17",0.960899868196,6.73949630547e-07]
["LNC_003666","XLOC_036861","lncRNA","Zm00001d010907_T001","Zm00001d010907","sp|Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1//1.34659e-63",0.971360860632,1.44612847031E-7]
["LNC_003666","XLOC_036861","lncRNA","Zm00001d024543_T003","Zm00001d024543","sp|B5X570|NAC14_ARATH NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1//1.54312e-60",0.950240766398,2.20931120531e-06]
["LNC_004229","XLOC_042593","lncRNA","Zm00001d034764_T005","Zm00001d034764","sp|Q9LJE2|SYKM_ARATH Lysine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA5 PE=2 SV=1//2.32532e-08",0.962602909944,5.40973855934e-07]
["LNC_000242","XLOC_002383","lncRNA","Zm00001d036102_T001","Zm00001d036102",null,0.974237930457,8.55884321194e-08]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d024241_T001","Zm00001d024241",null,0.966844719236,2.98443996405e-07]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d015060_T001","Zm00001d015060","sp|Q8W4G3|MATE4_ARATH MATE efflux family protein 4, chloroplastic OS=Arabidopsis thaliana GN=DTX46 PE=2 SV=1//0",0.975181175941,7.11388283836e-08]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d008663_T002","Zm00001d008663","sp|Q54TH4|GET4_DICDI Golgi to ER traffic protein 4 homolog OS=Dictyostelium discoideum GN=DDB_G0281815 PE=3 SV=1//3.39214e-29",0.965459985785,3.65339376751e-07]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d051632_T001","Zm00001d051632","sp|Q940Y3|ARID3_ARATH AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana GN=ARID3 PE=1 SV=1//8.28611e-91",0.984709290912,6.4163576674e-09]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d022616_T001","Zm00001d022616","sp|P15543|ACP3_HORVU Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=2//6.28635e-16",-0.953700023221,1.55003959408E-6]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d012868_T002","Zm00001d012868","sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO PE=2 SV=1//1.7565e-50",0.9856291768,4.71224970156e-09]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d032790_T003","Zm00001d032790","sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2//8.12812e-08",0.986420531602,3.55475560099E-9]
["LNC_000243","XLOC_002396","lncRNA","Zm00001d034241_T001","Zm00001d034241","sp|P19446|MDHG_CITLA Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1//0",0.972079475429,1.27511905923e-07]
["LNC_002863","XLOC_028531","lncRNA","Zm00001d043538_T001","Zm00001d043538","sp|Q942D4|BURP3_ORYSJ BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1//7.94963e-10",0.976141454596,5.84954502614e-08]
["LNC_002863","XLOC_028531","lncRNA","Zm00001d025144_T001","Zm00001d025144","sp|Q0WT48|DNJ21_ARATH DnaJ protein ERDJ2A OS=Arabidopsis thaliana GN=ERDJ2A PE=1 SV=1//5.95384e-41",0.960572658712,7.02236440997E-7]
["LNC_002860","XLOC_028487","lncRNA","Zm00001d044599_T004","Zm00001d044599","sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2//0",0.950783749953,2.09330080292e-06]
["LNC_000295","XLOC_003033","lncRNA","Zm00001d013226_T001","Zm00001d013226","sp|P93147|C81E1_GLYEC Isoflavone 2&apos;-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2//4.21705e-18",0.95099732841,2.04901605905E-6]
["LNC_005850","XLOC_058352","lncRNA","Zm00001d020614_T001","Zm00001d020614","sp|Q9LDU5|TI11A_ARATH Protein TIFY 11A OS=Arabidopsis thaliana GN=TIFY11A PE=1 SV=1//3.55689e-09",0.969558512047,1.95621703281e-07]
["LNC_004761","XLOC_047570","lncRNA","Zm00001d036724_T001","Zm00001d036724","sp|Q6S7B0|TAF5_ARATH Transcription initiation factor TFIID subunit 5 OS=Arabidopsis thaliana GN=TAF5 PE=1 SV=1//2.31583e-22",0.977411447696,4.45935157689e-08]
["LNC_004167","XLOC_042043","lncRNA","Zm00001d036387_T001","Zm00001d036387","sp|Q9D113|DNLZ_MOUSE DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=2 SV=1//3.24754e-07",0.958075049262,9.5065400485e-07]
["LNC_004166","XLOC_042042","lncRNA","Zm00001d035878_T002","Zm00001d035878",null,0.988894049968,1.30609079108e-09]
["LNC_004166","XLOC_042042","lncRNA","Zm00001d039966_T001","Zm00001d039966","sp|Q32PZ3|UN45A_RAT Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1//6.4158e-06",0.952152353708,1.82222153366E-6]
["LNC_004166","XLOC_042042","lncRNA","Zm00001d043059_T005","Zm00001d043059","sp|Q9ZVH7|FAX3_ARATH Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 SV=2//2.69083e-44",0.953702562589,1.5496212491e-06]
["LNC_005151","XLOC_051664","lncRNA","Zm00001d000193_T001","Zm00001d000193",null,0.968890671077,2.17796924273e-07]
["LNC_000430","XLOC_004717","lncRNA","Zm00001d016100_T001","Zm00001d016100","sp|Q9M158|STR4_ARATH Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=STR4 PE=1 SV=2//1.67521e-81",0.98470514485,6.42501651882E-9]
["LNC_006230","XLOC_061875","lncRNA","Zm00001d000491_T001","Zm00001d000491",null,0.964122565507,4.40767567111e-07]
["LNC_002135","XLOC_021329","lncRNA","Zm00001d007714_T001","Zm00001d007714","sp|Q9FZ22|GPAT2_ARATH Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1//8.782e-119",0.951766364355,1.89567415054E-6]
["LNC_003523","XLOC_035429","lncRNA","Zm00001d007782_T001","Zm00001d007782",null,0.966716246172,3.04205191703e-07]
["LNC_005781","XLOC_057787","lncRNA","Zm00001d044358_T003","Zm00001d044358","sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1//2.03207e-26",0.955312240052,1.30187517833e-06]
["LNC_005788","XLOC_057857","lncRNA","Zm00001d039058_T001","Zm00001d039058",null,0.953915646043,1.51483491262e-06]
["LNC_005011","XLOC_050084","lncRNA","Zm00001d024158_T007","Zm00001d024158","sp|Q38942|RAE1_ARATH Protein RAE1 OS=Arabidopsis thaliana GN=RAE1 PE=1 SV=2//1.42039e-12",0.968093143905,2.46850678565e-07]
["LNC_005548","XLOC_055423","lncRNA","Zm00001d038833_T001","Zm00001d038833","sp|Q9LXV0|U92A1_ARATH UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1//3.63112e-99",0.96612275621,3.31978778911e-07]
["LNC_004093","XLOC_041428","lncRNA","Zm00001d036530_T038","Zm00001d036530","sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2 OS=Arabidopsis thaliana GN=ARL2 PE=2 SV=1//6.93023e-24",0.987177718607,2.67161137657E-9]
["LNC_005546","XLOC_055421","lncRNA","Zm00001d031874_T001","Zm00001d031874",null,0.971231878901,1.47866625611e-07]
["LNC_004098","XLOC_041458","lncRNA","Zm00001d043598_T009","Zm00001d043598","sp|Q7FMW4|AB38G_ORYSJ ABC transporter G family member 38 OS=Oryza sativa subsp. japonica GN=ABCG38 PE=3 SV=1//1.73556e-27",0.98535477543,5.17726617133e-09]
["LNC_000938","XLOC_009564","lncRNA","Zm00001d003426_T002","Zm00001d003426","sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1//1.06414e-25",0.961922902164,5.91298877417e-07]
["LNC_000937","XLOC_009561","lncRNA","Zm00001d051796_T002","Zm00001d051796","sp|E2RBS6|SETD3_CANFA Histone-lysine N-methyltransferase setd3 OS=Canis familiaris GN=SETD3 PE=3 SV=1//1.90208e-11",0.974234938327,8.56377155856e-08]
["LNC_000937","XLOC_009561","lncRNA","Zm00001d043182_T001","Zm00001d043182","sp|Q8S2G0|ISPE_ORYSJ 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPE PE=2 SV=1//2.57315e-71",0.95998455285,7.55443624989e-07]
["LNC_000937","XLOC_009561","lncRNA","Zm00001d018761_T001","Zm00001d018761",null,0.961753341702,6.04408822769e-07]
["LNC_001004","XLOC_010198","lncRNA","Zm00001d033334_T001","Zm00001d033334","sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1//1.86084e-20",0.97095836675,1.54959312049e-07]
["LNC_002558","XLOC_025350","lncRNA","Zm00001d049049_T003","Zm00001d049049","sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1//7.07596e-12",0.987522466567,2.33260499805e-09]
["LNC_003233","XLOC_032084","lncRNA","Zm00001d039051_T008","Zm00001d039051","sp|Q93YP9|ERDL4_ARATH Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1//0",0.98533884144,5.2053530375E-9]
["LNC_003233","XLOC_032084","lncRNA","Zm00001d019648_T001","Zm00001d019648","sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1//2.21063e-93",0.987344732692,2.5027926398e-09]
["LNC_003233","XLOC_032084","lncRNA","Zm00001d006540_T001","Zm00001d006540","sp|Q41048|PSBQ1_MAIZE Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1//1.58851e-108",0.99480404929,2.95672375472e-11]
["LNC_004547","XLOC_045544","lncRNA","Zm00001d028401_T005","Zm00001d028401","sp|Q9S836|LAX2_ARATH Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1//0",0.951804120817,1.88838729676E-6]
["LNC_004545","XLOC_045496","lncRNA","Zm00001d008092_T001","Zm00001d008092",null,0.957458071127,1.02162542559e-06]
["LNC_004540","XLOC_045381","lncRNA","Zm00001d011454_T001","Zm00001d011454","sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1//7.58933e-120",0.963674901917,4.68606348836e-07]
["LNC_004781","XLOC_047801","lncRNA","Zm00001d046834_T001","Zm00001d046834","sp|Q9LRI7|OSR8_ORYSJ Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1//4.17454e-16",-0.966920289079,2.9509593186e-07]
["LNC_001687","XLOC_016374","lncRNA","Zm00001d026874_T001","Zm00001d026874",null,0.979636935138,2.6648304452E-8]
["LNC_001687","XLOC_016374","lncRNA","Zm00001d034739_T001","Zm00001d034739","sp|Q86I22|FAHD1_DICDI Acylpyruvase FAHD1, mitochondrial OS=Dictyostelium discoideum GN=fahd1 PE=3 SV=1//7.18512e-81",0.96735066329,2.76593497439e-07]
["LNC_001686","XLOC_016368","lncRNA","Zm00001d008820_T002","Zm00001d008820","sp|Q84MB6|DIOX2_ARATH Probable 2-oxoglutarate-dependent dioxygenase At3g49630 OS=Arabidopsis thaliana GN=At3g50210 PE=2 SV=1//2.85977e-26",0.952455477929,1.7661361067e-06]
["LNC_001685","XLOC_016363","lncRNA","Zm00001d033371_T002","Zm00001d033371","sp|Q9ZR37|DUS1_ARATH Dual specificity protein phosphatase 1 OS=Arabidopsis thaliana GN=DSPTP1 PE=1 SV=1//8.27475e-29",0.951450487577,1.95751517307e-06]
["LNC_001685","XLOC_016363","lncRNA","Zm00001d048592_T001","Zm00001d048592","sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2//0",0.952330811515,1.78903415771E-6]
["LNC_001681","XLOC_016321","lncRNA","Zm00001d011720_T002","Zm00001d011720","sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum GN=DDB_G0268948 PE=1 SV=2//6.12835e-16",0.979390916822,2.82857530731e-08]
["LNC_001681","XLOC_016321","lncRNA","Zm00001d014751_T004","Zm00001d014751","sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1//1.72528e-12",0.959626177412,7.89404530854e-07]
["LNC_001681","XLOC_016321","lncRNA","Zm00001d014596_T001","Zm00001d014596","sp|Q8RXT9|GDL8_ARATH GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana GN=At1g28590 PE=2 SV=2//3.45972e-81",0.988757964136,1.38778011305E-9]
["LNC_001680","XLOC_016308","lncRNA","Zm00001d047463_T001","Zm00001d047463","sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=2 SV=2//3.02223e-18",0.975140749185,7.17152217611e-08]
["LNC_001680","XLOC_016308","lncRNA","Zm00001d004478_T002","Zm00001d004478","sp|Q0JJS8|HF101_ORYSJ Fe-S cluster assembly factor HCF101, chloroplastic OS=Oryza sativa subsp. japonica GN=HCF101 PE=3 SV=3//0",0.978261672065,3.68621830837e-08]
["LNC_001680","XLOC_016308","lncRNA","Zm00001d022628_T002","Zm00001d022628","sp|P20026|MYB1_HORVU Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1//1.90363e-111",-0.96259606558,5.41462813029e-07]
["LNC_001680","XLOC_016308","lncRNA","Zm00001d030398_T003","Zm00001d030398","sp|Q0WLC6|PP349_ARATH Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana GN=MRL1 PE=2 SV=2//7.50587e-17",0.959337808218,8.17602463066e-07]
["LNC_002318","XLOC_022906","lncRNA","Zm00001d020876_T001","Zm00001d020876","sp|B3GS44|LRE_ARATH GPI-anchored protein LORELEI OS=Arabidopsis thaliana GN=LRE PE=2 SV=1//8.30452e-33",0.957612408314,1.00349003418e-06]
["LNC_002318","XLOC_022906","lncRNA","Zm00001d006929_T001","Zm00001d006929","sp|Q3SYZ6|XYLB_BOVIN Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1//2.95623e-151",0.980544371985,2.12491699791E-8]
["LNC_002319","XLOC_022907","lncRNA","Zm00001d031334_T001","Zm00001d031334",null,0.955718759586,1.24458516049E-6]
["LNC_002319","XLOC_022907","lncRNA","Zm00001d002953_T002","Zm00001d002953",null,0.96249692112,5.4858511267e-07]
["LNC_002319","XLOC_022907","lncRNA","Zm00001d012597_T004","Zm00001d012597",null,0.983575323368,9.15817199854E-9]
["LNC_002319","XLOC_022907","lncRNA","Zm00001d035631_T001","Zm00001d035631","sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20 OS=Arabidopsis thaliana GN=CHX20 PE=2 SV=1//0",0.969854534162,1.86386484025e-07]
["LNC_001444","XLOC_014460","lncRNA","Zm00001d001827_T003","Zm00001d001827","sp|Q9Y450|HBS1L_HUMAN HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1//3.56203e-108",0.956651021126,1.12074370762e-06]
["LNC_002314","XLOC_022906","lncRNA","Zm00001d001883_T004","Zm00001d001883","sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1//8.10051e-77",0.966690515252,3.05369618037e-07]
["LNC_002314","XLOC_022906","lncRNA","Zm00001d020799_T017","Zm00001d020799","sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=2 SV=2//4.65097e-124",0.956557708446,1.13267914847e-06]
["LNC_002314","XLOC_022906","lncRNA","Zm00001d002240_T001","Zm00001d002240","sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1//1.52553e-11",0.956240614801,1.1739941872E-6]
["LNC_002314","XLOC_022906","lncRNA","Zm00001d022113_T004","Zm00001d022113","sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1//1.75845e-62",0.952396290584,1.77697814352E-6]
["LNC_002316","XLOC_022906","lncRNA","Zm00001d040582_T002","Zm00001d040582","sp|O22145|OSGP2_ARATH Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2//3.11266e-59",0.970955813488,1.55026774973e-07]
["LNC_002317","XLOC_022906","lncRNA","Zm00001d017345_T002","Zm00001d017345","sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica GN=Os02g0636300 PE=2 SV=1//0",0.959123800295,8.39041588652e-07]
["LNC_002317","XLOC_022906","lncRNA","Zm00001d015400_T004","Zm00001d015400","sp|A4SML8|RLMI_AERS4 Ribosomal RNA large subunit methyltransferase I OS=Aeromonas salmonicida (strain A449) GN=rlmI PE=3 SV=1//4.68542e-09",0.97438938477,8.31231696807e-08]
["LNC_002317","XLOC_022906","lncRNA","Zm00001d044589_T001","Zm00001d044589",null,0.952249162779,1.80415813733e-06]
["LNC_005575","XLOC_055630","lncRNA","Zm00001d012732_T002","Zm00001d012732","sp|Q9P7W0|OPA3_SCHPO OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1703.11 PE=3 SV=1//4.49981e-15",0.952952470738,1.67715099186E-6]
["LNC_005575","XLOC_055630","lncRNA","Zm00001d047044_T004","Zm00001d047044",null,0.999989143413,0]
["LNC_005575","XLOC_055630","lncRNA","Zm00001d010512_T002","Zm00001d010512","sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1 OS=Arabidopsis thaliana GN=KPNB1 PE=1 SV=1//0",0.97964313087,2.66080655287e-08]
["LNC_003304","XLOC_032862","lncRNA","Zm00001d027848_T009","Zm00001d027848","sp|O64886|COX10_ARATH Protoheme IX farnesyltransferase, mitochondrial OS=Arabidopsis thaliana GN=COX10 PE=2 SV=4//2.94607e-95",0.958428536231,9.11792989999e-07]
["LNC_003304","XLOC_032862","lncRNA","Zm00001d017895_T003","Zm00001d017895","sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1//0",0.957574731338,1.00789349133e-06]
["LNC_004433","XLOC_044427","lncRNA","Zm00001d011069_T001","Zm00001d011069","sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1//5.73668e-136",0.974582562794,8.00611883456e-08]
["LNC_004430","XLOC_044417","lncRNA","Zm00001d017956_T001","Zm00001d017956",null,0.960059472279,7.4849300935e-07]
["LNC_004430","XLOC_044417","lncRNA","Zm00001d027539_T001","Zm00001d027539","sp|Q96324|GSTFB_ARATH Glutathione S-transferase F11 OS=Arabidopsis thaliana GN=GSTF11 PE=2 SV=1//3.10718e-36",0.974220774068,8.58713224972e-08]
["LNC_004430","XLOC_044417","lncRNA","Zm00001d032274_T001","Zm00001d032274",null,0.956404806227,1.15245453669E-6]
["LNC_004430","XLOC_044417","lncRNA","Zm00001d011769_T001","Zm00001d011769","sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1//5.62547e-77",0.96545955351,3.65361972232e-07]
["LNC_000647","XLOC_006874","lncRNA","Zm00001d013655_T001","Zm00001d013655","sp|Q0D3F2|NAS3_ORYSJ Nicotianamine synthase 3 OS=Oryza sativa subsp. japonica GN=NAS3 PE=2 SV=1//7.2734e-106",0.963502039264,4.79722744195e-07]
["LNC_006143","XLOC_061123","lncRNA","Zm00001d016698_T001","Zm00001d016698",null,0.97412865846,8.7402971527e-08]
["LNC_006148","XLOC_061144","lncRNA","Zm00001d028539_T001","Zm00001d028539","sp|Q8S4F6|SQD2_ARATH Sulfoquinovosyl transferase SQD2 OS=Arabidopsis thaliana GN=SQD2 PE=1 SV=1//0",0.951543017228,1.9392368289e-06]
["LNC_002268","XLOC_022467","lncRNA","Zm00001d052556_T001","Zm00001d052556","sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1//0",0.952593867354,1.7409904367e-06]
["LNC_002268","XLOC_022467","lncRNA","Zm00001d027950_T002","Zm00001d027950","sp|Q10QR9|HEM4_ORYSJ Uroporphyrinogen-III synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=UROS PE=2 SV=1//1.18282e-25",0.987040422984,2.81709189309E-9]
["LNC_002263","XLOC_022420","lncRNA","Zm00001d052372_T001","Zm00001d052372","sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1//6.16256e-33",0.950512549454,2.15062351194e-06]
["LNC_005965","XLOC_059631","lncRNA","Zm00001d020714_T001","Zm00001d020714","sp|Q67TP9|HSFB1_ORYSJ Heat stress transcription factor B-1 OS=Oryza sativa subsp. japonica GN=HSFB1 PE=2 SV=1//3.24798e-123",0.981149079422,1.81643320385E-8]
["LNC_005963","XLOC_059596","lncRNA","Zm00001d053070_T002","Zm00001d053070","sp|Q9LRE6|DPOD1_ORYSJ DNA polymerase delta catalytic subunit OS=Oryza sativa subsp. japonica GN=POLD1 PE=2 SV=1//0",0.957354350473,1.03395863205E-6]
["LNC_005963","XLOC_059596","lncRNA","Zm00001d047340_T001","Zm00001d047340","sp|Q9LS01|AOC3_ARATH Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1//3.64944e-73",0.958968766205,8.54849802501e-07]
["LNC_004429","XLOC_044413","lncRNA","Zm00001d012036_T001","Zm00001d012036","sp|P31927|SPSA_MAIZE Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1//0",0.967205433496,2.82730837409e-07]
["LNC_004429","XLOC_044413","lncRNA","Zm00001d052475_T001","Zm00001d052475","sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1//5.33451e-171",0.95627616781,1.16930323557E-6]
["LNC_000953","XLOC_009752","lncRNA","Zm00001d043191_T003","Zm00001d043191","sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3//2.77757e-60",0.957779904651,9.84098616152e-07]
["LNC_000796","XLOC_008125","lncRNA","Zm00001d013470_T015","Zm00001d013470","sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana GN=ORP1C PE=2 SV=1//2.59506e-13",0.958346347867,9.20713790764e-07]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d048028_T001","Zm00001d048028","sp|C4IZX0|TATC_MAIZE Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=TATC PE=2 SV=1//1.37631e-74",0.995092728861,2.2227775176E-11]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d020858_T003","Zm00001d020858","sp|Q39183|D6KL2_ARATH Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana GN=D6PKL2 PE=1 SV=1//0",-0.975179392029,7.11641848128e-08]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d022544_T002","Zm00001d022544","sp|Q93WI0|STR12_ARATH Rhodanese-like/PpiC domain-containing protein 12 OS=Arabidopsis thaliana GN=At5g19370 PE=2 SV=1//3.42391e-06",0.959867946005,7.6636369073e-07]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d026248_T001","Zm00001d026248","sp|O49500|MBR2_ARATH E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1//1.84803e-31",0.950730342949,2.10449229909e-06]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d009336_T001","Zm00001d009336",null,-0.962825090593,5.2529099164E-7]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d016144_T003","Zm00001d016144","sp|Q9C8L2|FAP3_ARATH Fatty-acid-binding protein 3 OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1//2.52009e-42",0.987818247636,2.06995753871e-09]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d046485_T001","Zm00001d046485","sp|C0LGF5|Y1341_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2//0",-0.957791905667,9.82720742692e-07]
["LNC_000797","XLOC_008145","lncRNA","Zm00001d045507_T001","Zm00001d045507","sp|Q9CAN3|SCL28_ARATH Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=1 SV=1//8.25644e-114",-0.967524610634,2.69382557796e-07]
["LNC_001662","XLOC_016090","lncRNA","Zm00001d024352_T001","Zm00001d024352","sp|D7SFH9|GPDL2_ARATH Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1//9.64911e-57",0.975069902765,7.27342990281e-08]
["LNC_003996","XLOC_040594","lncRNA","Zm00001d001902_T002","Zm00001d001902","sp|Q0J968|CAEH2_ORYSJ Probable carboxylesterase Os04g0669600 OS=Oryza sativa subsp. japonica GN=Os04g0669600 PE=2 SV=1//1.34542e-116",0.950210971148,2.21582152182E-6]
["LNC_003996","XLOC_040594","lncRNA","Zm00001d019164_T004","Zm00001d019164","sp|Q6ZLK0|OST48_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Oryza sativa subsp. japonica GN=OST48 PE=2 SV=1//5.38412e-22",0.999596359532,0]
["LNC_005149","XLOC_051653","lncRNA","Zm00001d005051_T001","Zm00001d005051","sp|Q682S0|RPT2_ARATH Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2//1.47242e-81",0.974975444917,7.4110917847e-08]
["LNC_005149","XLOC_051653","lncRNA","Zm00001d003846_T003","Zm00001d003846",null,0.964625943386,4.11051675808e-07]
["LNC_005149","XLOC_051653","lncRNA","Zm00001d044254_T007","Zm00001d044254",null,-0.96228040178,5.6439829837E-7]
["LNC_005149","XLOC_051653","lncRNA","Zm00001d038842_T001","Zm00001d038842","sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1//7.85706e-100",0.968169947079,2.43925573518E-7]
["LNC_004941","XLOC_049547","lncRNA","Zm00001d040720_T001","Zm00001d040720",null,0.964876293856,3.96878376385e-07]
["LNC_004941","XLOC_049547","lncRNA","Zm00001d025980_T007","Zm00001d025980","sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=2 SV=1//1.18171e-59",0.976963574158,4.91561875648e-08]
["LNC_004941","XLOC_049547","lncRNA","Zm00001d032222_T002","Zm00001d032222","sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1//0",0.956621934789,1.12445331957E-6]
["LNC_004941","XLOC_049547","lncRNA","Zm00001d046354_T001","Zm00001d046354","sp|Q5HZ36|GAT21_ARATH GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2//3.97688e-17",0.953062828453,1.65788333728e-06]
["LNC_004941","XLOC_049547","lncRNA","Zm00001d013799_T001","Zm00001d013799","sp|O80885|ARASP_ARATH Membrane metalloprotease ARASP, chloroplastic OS=Arabidopsis thaliana GN=ARASP PE=2 SV=1//9.98966e-131",0.966988865541,2.9208362573e-07]
["LNC_004945","XLOC_049570","lncRNA","Zm00001d016024_T001","Zm00001d016024","sp|Q4PR42|EXP24_ORYSJ Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2//1.13282e-132",0.992507735564,1.83605353143e-10]
["LNC_004944","XLOC_049567","lncRNA","Zm00001d005329_T001","Zm00001d005329","sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1//6.38862e-13",0.976112776338,5.88450190797e-08]
["LNC_005145","XLOC_051640","lncRNA","Zm00001d029383_T001","Zm00001d029383","sp|F4KD68|WTR43_ARATH WAT1-related protein At5g45370 OS=Arabidopsis thaliana GN=At5g45370 PE=2 SV=1//4.0301e-78",0.962101929251,5.77703301419e-07]
["LNC_005147","XLOC_051641","lncRNA","Zm00001d023283_T001","Zm00001d023283","sp|Q55GA4|CDC45_DICDI Cell division control protein 45 homolog OS=Dictyostelium discoideum GN=cdc45 PE=3 SV=1//1.23731e-58",0.954465872846,1.42786843083e-06]
["LNC_005147","XLOC_051641","lncRNA","Zm00001d053004_T001","Zm00001d053004","sp|Q9CA25|LAX3_ARATH Auxin transporter-like protein 3 OS=Arabidopsis thaliana GN=LAX3 PE=2 SV=1//0",0.963637567467,4.70989722112E-7]
["LNC_000183","XLOC_001989","lncRNA","Zm00001d019184_T002","Zm00001d019184","sp|P50846|ALKH_BACSU KHG/KDPG aldolase OS=Bacillus subtilis (strain 168) GN=kdgA PE=2 SV=1//2.7851e-20",0.974784851552,7.69517902732e-08]
["LNC_000183","XLOC_001989","lncRNA","Zm00001d026536_T004","Zm00001d026536","sp|Q7XM16|C3H30_ORYSJ Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN=Os04g0663200 PE=2 SV=3//9.38213e-154",0.955257167939,1.30979466606e-06]
["LNC_000183","XLOC_001989","lncRNA","Zm00001d017706_T002","Zm00001d017706","sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1//1.80776e-177",0.951628419055,1.92248690345e-06]
["LNC_000183","XLOC_001989","lncRNA","Zm00001d039366_T001","Zm00001d039366","sp|Q8VY22|TBL38_ARATH Protein trichome birefringence-like 38 OS=Arabidopsis thaliana GN=TBL38 PE=2 SV=1//9.13127e-108",0.959218623531,8.29487880161e-07]
["LNC_000183","XLOC_001989","lncRNA","Zm00001d042620_T001","Zm00001d042620","sp|Q9LVM2|NDHN_ARATH NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana GN=ndhN PE=2 SV=1//7.27317e-37",0.963928928253,4.52643051485e-07]
["LNC_002499","XLOC_024884","lncRNA","Zm00001d031481_T001","Zm00001d031481","sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana GN=AHL10 PE=1 SV=2//2.46333e-37",0.954039638057,1.49488001044e-06]
["LNC_002496","XLOC_024859","lncRNA","Zm00001d050082_T001","Zm00001d050082","sp|Q43062|PME_PRUPE Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1//1.19662e-35",0.985964167588,4.19039247745e-09]
["LNC_002495","XLOC_024847","lncRNA","Zm00001d038366_T001","Zm00001d038366","sp|Q9CAY3|GPAT5_ARATH Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1//8.67716e-156",0.971179449452,1.49205786171E-7]
["LNC_002493","XLOC_024832","lncRNA","Zm00001d022557_T001","Zm00001d022557","sp|Q9XFB7|NAS9_HORVU Nicotianamine synthase 9 OS=Hordeum vulgare GN=NAS9 PE=1 SV=1//3.76637e-151",0.953569819535,1.57161023795e-06]
["LNC_002492","XLOC_024832","lncRNA","Zm00001d025923_T001","Zm00001d025923","sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1//4.20762e-78",0.955139873328,1.32678934239E-6]
["LNC_002490","XLOC_024788","lncRNA","Zm00001d049502_T001","Zm00001d049502",null,0.951880020863,1.87380610428e-06]
["LNC_004899","XLOC_049206","lncRNA","Zm00001d019217_T001","Zm00001d019217","sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=2 SV=1//5.01576e-30",0.962877797793,5.21624181626e-07]
["LNC_004892","XLOC_049118","lncRNA","Zm00001d036936_T002","Zm00001d036936","sp|Q9M9S6|UTR3_ARATH UDP-galactose/UDP-glucose transporter 3 OS=Arabidopsis thaliana GN=UTR3 PE=1 SV=1//2.47741e-118",0.951981149345,1.85451718959e-06]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d024169_T002","Zm00001d024169",null,0.97576052732,6.32761203434e-08]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d044584_T005","Zm00001d044584","sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2//0",0.980605101986,2.09217247971e-08]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d051546_T001","Zm00001d051546","sp|P91924|ARF_DUGJA ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3//2.40962e-80",0.970178872276,1.76669754381e-07]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d003409_T001","Zm00001d003409","sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2//1.21502e-46",-0.950701307788,2.11059652881e-06]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d041923_T002","Zm00001d041923","sp|Q9SZL7|FRS9_ARATH Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9 PE=2 SV=2//2.3902e-16",0.980627976167,2.07994397261e-08]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d039400_T012","Zm00001d039400","sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens GN=CNOT4 PE=1 SV=3//5.16685e-38",0.968692370932,2.24752312095e-07]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d047574_T001","Zm00001d047574","sp|Q9SKD9|WRK46_ARATH Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1//1.43307e-14",0.974307766745,8.44445566806e-08]
["LNC_003832","XLOC_039066","lncRNA","Zm00001d028962_T001","Zm00001d028962","sp|Q9SKD9|WRK46_ARATH Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1//4.0037e-16",-0.950391615967,2.17658270103e-06]
["LNC_003833","XLOC_039085","lncRNA","Zm00001d036656_T002","Zm00001d036656","sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1//7.38547e-63",0.976265726119,5.6999729825e-08]
["LNC_003833","XLOC_039085","lncRNA","Zm00001d004779_T002","Zm00001d004779","sp|Q9M9G6|CTF64_ARATH Cleavage stimulating factor 64 OS=Arabidopsis thaliana GN=CSTF64 PE=1 SV=1//7.64427e-86",0.976267553196,5.69779690096e-08]
["LNC_001278","XLOC_012647","lncRNA","Zm00001d018201_T002","Zm00001d018201","sp|Q93ZH0|LYM1_ARATH LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana GN=LYM1 PE=1 SV=1//1.66292e-123",0.954948870062,1.35483772512e-06]
["LNC_001276","XLOC_012631","lncRNA","Zm00001d051542_T037","Zm00001d051542","sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2//7.89565e-72",0.953240391124,1.62725117248E-6]
["LNC_001276","XLOC_012631","lncRNA","Zm00001d053009_T009","Zm00001d053009","sp|Q9SJD4|LACS8_ARATH Long chain acyl-CoA synthetase 8 OS=Arabidopsis thaliana GN=LACS8 PE=1 SV=1//3.08645e-12",0.950940885559,2.06064635E-6]
["LNC_004305","XLOC_043532","lncRNA","Zm00001d010529_T004","Zm00001d010529","sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1//0",0.997018604748,1.84585680074E-12]
["LNC_004302","XLOC_043491","lncRNA","Zm00001d016764_T001","Zm00001d016764","sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1//9.28566e-56",0.955126375488,1.32875620285e-06]
["LNC_004302","XLOC_043491","lncRNA","Zm00001d045540_T001","Zm00001d045540",null,0.963306403853,4.92555407128e-07]
["LNC_004302","XLOC_043491","lncRNA","Zm00001d028170_T001","Zm00001d028170","sp|Q9SJ74|B561G_ARATH Cytochrome b561 and DOMON domain-containing protein At2g04850 OS=Arabidopsis thaliana GN=At2g04850 PE=2 SV=2//9.09005e-139",0.96921025592,2.06948842951e-07]
["LNC_004308","XLOC_043532","lncRNA","Zm00001d040670_T003","Zm00001d040670","sp|Q9M7Z1|ODB2_ARATH Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=BCE2 PE=1 SV=1//7.2377e-09",0.995973772552,8.27604651477e-12]
["LNC_000976","XLOC_009929","lncRNA","Zm00001d036440_T004","Zm00001d036440","sp|F4KD68|WTR43_ARATH WAT1-related protein At5g45370 OS=Arabidopsis thaliana GN=At5g45370 PE=2 SV=1//1.11035e-41",0.972024983414,1.28749267247e-07]
["LNC_001261","XLOC_012481","lncRNA","Zm00001d002770_T007","Zm00001d002770",null,0.963108394042,5.05820184626e-07]
["LNC_001261","XLOC_012481","lncRNA","Zm00001d013098_T011","Zm00001d013098","sp|O23888|ALDO2_MAIZE Indole-3-acetaldehyde oxidase OS=Zea mays GN=AO2 PE=2 SV=1//1.18705e-17",0.954970804093,1.35159305703E-6]
["LNC_001873","XLOC_018506","lncRNA","Zm00001d018334_T001","Zm00001d018334","sp|Q93YV9|SKIP8_ARATH F-box protein SKIP8 OS=Arabidopsis thaliana GN=SKIP8 PE=1 SV=1//1.89206e-12",0.952965365925,1.6748904641E-6]
["LNC_001873","XLOC_018506","lncRNA","Zm00001d015127_T001","Zm00001d015127","sp|Q05024|TRI1_YEAST Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRI1 PE=1 SV=1//4.16854e-10",0.950919256586,2.0651169419e-06]
["LNC_001873","XLOC_018506","lncRNA","Zm00001d039076_T003","Zm00001d039076",null,0.9587728675,8.7516215963e-07]
["LNC_001873","XLOC_018506","lncRNA","Zm00001d038365_T005","Zm00001d038365","sp|Q84TF0|AKRCA_ARATH Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana GN=AKR4C10 PE=1 SV=1//1.6685e-62",0.981722126344,1.55812647229e-08]
["LNC_001875","XLOC_018527","lncRNA","Zm00001d035614_T001","Zm00001d035614","sp|Q0WT19|IP5P8_ARATH Type I inositol polyphosphate 5-phosphatase 8 OS=Arabidopsis thaliana GN=IP5P8 PE=2 SV=1//7.21071e-17",0.983391967938,9.67791891071e-09]
["LNC_001305","XLOC_012983","lncRNA","Zm00001d038922_T001","Zm00001d038922","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//9.56297e-30",0.967956591127,2.52120266442e-07]
["LNC_001305","XLOC_012983","lncRNA","Zm00001d021645_T001","Zm00001d021645","sp|A3BKF2|LTD_ORYSJ Protein LHCP TRANSLOCATION DEFECT OS=Oryza sativa subsp. japonica GN=LTD PE=2 SV=1//3.33503e-83",0.959881988973,7.6504198554e-07]
["LNC_001305","XLOC_012983","lncRNA","Zm00001d015260_T004","Zm00001d015260","sp|Q9FLU1|BIN4_ARATH DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2//1.46928e-33",0.957150561213,1.05853505028e-06]
["LNC_001879","XLOC_018552","lncRNA","Zm00001d041179_T006","Zm00001d041179","sp|Q4LDF9|OEP37_PEA Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1//2.89024e-70",0.986953448664,2.91247537199e-09]
["LNC_001879","XLOC_018552","lncRNA","Zm00001d044388_T001","Zm00001d044388","sp|Q9M3A8|PP273_ARATH Pentatricopeptide repeat-containing protein At3g49240 OS=Arabidopsis thaliana GN=EMB1796 PE=2 SV=1//2.18982e-08",0.958779624955,8.74455169608e-07]
["LNC_001879","XLOC_018552","lncRNA","Zm00001d036416_T001","Zm00001d036416","sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=1 SV=1//0",-0.968284207544,2.3962497661e-07]
["LNC_001879","XLOC_018552","lncRNA","Zm00001d007639_T002","Zm00001d007639","sp|Q8YZH7|DER_NOSS1 GTPase Der OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=der PE=3 SV=1//6.24696e-10",0.98363368216,8.99750451921e-09]
["LNC_001879","XLOC_018552","lncRNA","Zm00001d034897_T001","Zm00001d034897","sp|P19954|PRSP1_SPIOL Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea GN=PSRP1 PE=1 SV=2//1.16945e-82",0.985999458005,4.13822176526e-09]
["LNC_001879","XLOC_018552","lncRNA","Zm00001d048599_T003","Zm00001d048599","sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2//1.50273e-38",0.980550607176,2.1215363688e-08]
["LNC_001879","XLOC_018552","lncRNA","Zm00001d044970_T001","Zm00001d044970","sp|Q9ZVN4|Y1500_ARATH Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1//1.88602e-84",0.9733405747,1.01416629761E-7]
["LNC_002874","XLOC_028667","lncRNA","Zm00001d003617_T001","Zm00001d003617","sp|Q9LXD9|PME51_ARATH Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1//8.22205e-124",0.953974931404,1.50526750575E-6]
["LNC_002873","XLOC_028611","lncRNA","Zm00001d006415_T005","Zm00001d006415","sp|F4HVW5|VAD1_ARATH Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic OS=Arabidopsis thaliana GN=VAD1 PE=1 SV=1//3.3003e-30",0.959758424491,7.76734068619e-07]
["LNC_002873","XLOC_028611","lncRNA","Zm00001d045927_T005","Zm00001d045927","sp|Q9ASU1|DGAT2_ARATH Diacylglycerol O-acyltransferase 2 OS=Arabidopsis thaliana GN=DGAT2 PE=2 SV=1//1.84624e-10",0.951794910455,1.89016280894E-6]
["LNC_002878","XLOC_028684","lncRNA","Zm00001d028412_T017","Zm00001d028412","sp|Q0WSY2|FPP4_ARATH Filament-like plant protein 4 OS=Arabidopsis thaliana GN=FPP4 PE=1 SV=1//0",0.99514432004,2.10853556837e-11]
["LNC_002878","XLOC_028684","lncRNA","Zm00001d040678_T011","Zm00001d040678",null,0.962346738351,5.59515510368e-07]
["LNC_001899","XLOC_018695","lncRNA","Zm00001d016947_T001","Zm00001d016947",null,0.958904163753,8.61506469496e-07]
["LNC_005985","XLOC_059759","lncRNA","Zm00001d050401_T002","Zm00001d050401","sp|Q9MAC5|PTBP1_ARATH Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana GN=PTB PE=1 SV=1//1.23272e-13",0.959541871898,7.97567069943e-07]
["LNC_003659","XLOC_036822","lncRNA","Zm00001d009749_T002","Zm00001d009749","sp|Q10251|IF2P_SCHPO Eukaryotic translation initiation factor 5B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC56F8.03 PE=1 SV=1//5.83046e-07",0.951434505653,1.96068604064e-06]
["LNC_003650","XLOC_036666","lncRNA","Zm00001d042615_T005","Zm00001d042615",null,0.95833539276,9.21908084539e-07]
["LNC_003655","XLOC_036791","lncRNA","Zm00001d034944_T001","Zm00001d034944","sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1//8.58548e-164",0.950734894712,2.10353662622e-06]
["LNC_002126","XLOC_021278","lncRNA","Zm00001d032715_T002","Zm00001d032715","sp|P42158|KC1D_ARATH Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2//1.95332e-176",0.992412831998,1.95501170808e-10]
["LNC_002126","XLOC_021278","lncRNA","Zm00001d032931_T005","Zm00001d032931","sp|Q6IQE9|ALKB6_DANRE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio GN=alkbh6 PE=2 SV=1//2.4361e-10",0.992418661153,1.94753102534e-10]
["LNC_000543","XLOC_006002","lncRNA","Zm00001d035479_T001","Zm00001d035479","sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1//3.08789e-89",0.987542926189,2.31362284886e-09]
["LNC_003533","XLOC_035603","lncRNA","Zm00001d033366_T002","Zm00001d033366",null,0.972121788972,1.26557629487E-7]
["LNC_003533","XLOC_035603","lncRNA","Zm00001d011334_T002","Zm00001d011334","sp|Q9ZQI3|GDL40_ARATH GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana GN=At2g27360 PE=2 SV=1//6.22974e-104",0.973264027249,1.02867748319E-7]
["LNC_003533","XLOC_035603","lncRNA","Zm00001d032249_T001","Zm00001d032249","sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2//7.10823e-45",0.951980485851,1.85464322677e-06]
["LNC_003532","XLOC_035585","lncRNA","Zm00001d037656_T001","Zm00001d037656","sp|Q7GCM7|XIP1_ORYSJ Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1//7.23449e-109",0.986593035942,3.33559757593E-9]
["LNC_003538","XLOC_035636","lncRNA","Zm00001d035000_T001","Zm00001d035000",null,0.983134531667,1.04470960771e-08]
["LNC_005798","XLOC_057924","lncRNA","Zm00001d041390_T001","Zm00001d041390",null,0.963097986996,5.06525130728e-07]
["LNC_006006","XLOC_059907","lncRNA","Zm00001d053722_T001","Zm00001d053722","sp|Q2N5X0|KYNB_ERYLH Kynurenine formamidase OS=Erythrobacter litoralis (strain HTCC2594) GN=kynB PE=3 SV=1//2.28693e-15",0.952772775077,1.70890434203e-06]
["LNC_006006","XLOC_059907","lncRNA","Zm00001d035818_T002","Zm00001d035818","sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1//1.67264e-48",0.96019045305,7.36463448003e-07]
["LNC_000921","XLOC_009426","lncRNA","Zm00001d021890_T014","Zm00001d021890","sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1//1.85034e-31",0.963686307663,4.67880138855e-07]
["LNC_000923","XLOC_009432","lncRNA","Zm00001d039368_T003","Zm00001d039368","sp|Q94F40|GDL9_ARATH GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana GN=At1g28600 PE=2 SV=1//4.12926e-62",0.965032665032,3.882246844E-7]
["LNC_000927","XLOC_009462","lncRNA","Zm00001d027376_T001","Zm00001d027376","sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2//0",0.966931201548,2.9461494222e-07]
["LNC_000927","XLOC_009462","lncRNA","Zm00001d012672_T002","Zm00001d012672","sp|Q50228|FMDA_METME Formamidase OS=Methylophilus methylotrophus GN=fmdA PE=1 SV=1//2.67459e-113",0.956683974764,1.11655261503E-6]
["LNC_000927","XLOC_009462","lncRNA","Zm00001d022274_T001","Zm00001d022274","sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1//0",0.969710287342,1.90842265102e-07]
["LNC_000927","XLOC_009462","lncRNA","Zm00001d024248_T003","Zm00001d024248","sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2//1.61946e-07",0.967268541827,2.8005074304e-07]
["LNC_000511","XLOC_005654","lncRNA","Zm00001d025696_T001","Zm00001d025696","sp|P23548|GUN_PAEPO Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2//1.30564e-07",0.955973490456,1.20971909112e-06]
["LNC_003227","XLOC_032047","lncRNA","Zm00001d009800_T001","Zm00001d009800","sp|Q2VZE7|APAG_MAGSA Protein ApaG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=apaG PE=3 SV=1//5.07879e-30",0.952149280917,1.82279721894e-06]
["LNC_003227","XLOC_032047","lncRNA","Zm00001d036345_T002","Zm00001d036345","sp|P49085|PSY_MAIZE Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1//0",0.951660763897,1.91617313172E-6]
["LNC_005462","XLOC_054790","lncRNA","Zm00001d002770_T007","Zm00001d002770",null,0.973731874729,9.42511735325e-08]
["LNC_005460","XLOC_054790","lncRNA","Zm00001d018915_T004","Zm00001d018915","sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1//7.02812e-11",0.952777518699,1.70806003208E-6]
["LNC_001470","XLOC_014641","lncRNA","Zm00001d030666_T030","Zm00001d030666",null,1,0]
["LNC_001470","XLOC_014641","lncRNA","Zm00001d025817_T038","Zm00001d025817","sp|Q8RWY6|CLASP_ARATH CLIP-associated protein OS=Arabidopsis thaliana GN=CLASP PE=1 SV=1//0",0.995268581192,1.85260695673e-11]
["LNC_000225","XLOC_002271","lncRNA","Zm00001d031439_T001","Zm00001d031439","sp|P74516|TRML_SYNY3 Putative tRNA (cytidine(34)-2&apos;-O)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0992 PE=3 SV=1//2.82769e-40",0.958898311976,8.6211146666e-07]
["LNC_000225","XLOC_002271","lncRNA","Zm00001d045488_T003","Zm00001d045488","sp|Q9SZ63|NUD14_ARATH Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana GN=NUDT14 PE=1 SV=2//4.94673e-22",0.966423163733,3.17679439643e-07]
["LNC_000225","XLOC_002271","lncRNA","Zm00001d012645_T002","Zm00001d012645","sp|Q8H1R4|AB10I_ARATH ABC transporter I family member 10, chloroplastic OS=Arabidopsis thaliana GN=ABCI10 PE=2 SV=1//8.91446e-94",0.965921056074,3.41863479969e-07]
["LNC_000225","XLOC_002271","lncRNA","Zm00001d043401_T001","Zm00001d043401","sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CDS1 PE=1 SV=1//0",0.957217710965,1.05038629838e-06]
["LNC_000225","XLOC_002271","lncRNA","Zm00001d003866_T001","Zm00001d003866",null,0.97299313413,1.08136452237E-7]
["LNC_000225","XLOC_002271","lncRNA","Zm00001d049026_T011","Zm00001d049026","sp|P19672|YQXC_BACSU Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) GN=yqxC PE=3 SV=3//2.19335e-11",0.973800652697,9.30344978833E-8]
["LNC_005754","XLOC_057600","lncRNA","Zm00001d011803_T002","Zm00001d011803","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//3.54466e-28",0.953091427939,1.65291884535e-06]
["LNC_003317","XLOC_032977","lncRNA","Zm00001d003062_T001","Zm00001d003062",null,0.951717374421,1.90516224818e-06]
["LNC_003317","XLOC_032977","lncRNA","Zm00001d034414_T002","Zm00001d034414","sp|Q9LZH5|LTPG2_ARATH Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1//4.54079e-07",0.955610084834,1.25970047904E-6]
["LNC_003316","XLOC_032976","lncRNA","Zm00001d038910_T001","Zm00001d038910","sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1//3.5074e-51",0.961551284428,6.20331849444e-07]
["LNC_003316","XLOC_032976","lncRNA","Zm00001d049804_T001","Zm00001d049804","sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1//8.10429e-165",0.965573807502,3.59428383501e-07]
["LNC_003313","XLOC_032940","lncRNA","Zm00001d026649_T001","Zm00001d026649","sp|Q9SMT7|4CLLA_ARATH Oxalate--CoA ligase OS=Arabidopsis thaliana GN=AAE3 PE=1 SV=1//0",-0.95772411499,9.90524155585e-07]
["LNC_003313","XLOC_032940","lncRNA","Zm00001d021665_T001","Zm00001d021665",null,-0.956871188333,1.09297804103E-6]
["LNC_003313","XLOC_032940","lncRNA","Zm00001d011510_T001","Zm00001d011510",null,0.973513009611,9.82074459532e-08]
["LNC_004443","XLOC_044502","lncRNA","Zm00001d010510_T001","Zm00001d010510","sp|Q9FG37|GACP3_ARATH Gamma-tubulin complex component 3 OS=Arabidopsis thaliana GN=GCP3 PE=1 SV=1//5.08355e-11",0.952816113929,1.70120281728e-06]
["LNC_004443","XLOC_044502","lncRNA","Zm00001d021998_T001","Zm00001d021998","sp|Q9SN22|SCL32_ARATH Scarecrow-like protein 32 OS=Arabidopsis thaliana GN=SCL32 PE=2 SV=1//1.10529e-154",-0.953584831218,1.56911119881e-06]
["LNC_000654","XLOC_006938","lncRNA","Zm00001d044526_T001","Zm00001d044526",null,0.9560220282,1.20316438856e-06]
["LNC_000654","XLOC_006938","lncRNA","Zm00001d009774_T001","Zm00001d009774","sp|Q8LAH8|NDK4_ARATH Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2//8.11195e-107",0.966997578802,2.91702642929e-07]
["LNC_001789","XLOC_017858","lncRNA","Zm00001d047242_T002","Zm00001d047242","sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2//0",-0.957481868464,1.01881227996e-06]
["LNC_001789","XLOC_017858","lncRNA","GRMZM5G856777_T01","GRMZM5G856777","sp|P48187|PSBC_MAIZE Photosystem II CP43 reaction center protein OS=Zea mays GN=psbC PE=1 SV=1//0",0.977845688409,4.04984157321e-08]
["LNC_001789","XLOC_017858","lncRNA","Zm00001d019899_T001","Zm00001d019899","sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1//1.20195e-95",0.960236394336,7.32280680538e-07]
["LNC_001789","XLOC_017858","lncRNA","Zm00001d023393_T001","Zm00001d023393","sp|Q38834|R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=1 SV=2//9.42359e-09",0.961874385004,5.95026778072e-07]
["LNC_001789","XLOC_017858","lncRNA","Zm00001d033259_T001","Zm00001d033259","sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1//0",0.979961980535,2.46016891303e-08]
["LNC_001786","XLOC_017831","lncRNA","Zm00001d048520_T008","Zm00001d048520","sp|Q9ATL7|TIP31_MAIZE Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1//2.21996e-57",0.983980881668,8.08747735448e-09]
["LNC_006171","XLOC_061519","lncRNA","Zm00001d048050_T001","Zm00001d048050","sp|P38563|GLNA5_MAIZE Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2//0",0.954055107129,1.49240517366e-06]
["LNC_006172","XLOC_061525","lncRNA","Zm00001d005269_T005","Zm00001d005269","sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3//1.59686e-43",0.950796814105,2.09057039413E-6]
["LNC_004118","XLOC_041573","lncRNA","Zm00001d026068_T001","Zm00001d026068","sp|O65351|SBT17_ARATH Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1//0",0.974679559845,7.85579934437e-08]
["LNC_001862","XLOC_018430","lncRNA","Zm00001d047897_T028","Zm00001d047897","sp|Q0WV90|TPR1_ARATH Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3//0",0.981068477677,1.8553486747e-08]
["LNC_000463","XLOC_005071","lncRNA","Zm00001d051083_T001","Zm00001d051083","sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1//2.65702e-101",0.951576360625,1.9326834455e-06]
["LNC_005974","XLOC_059683","lncRNA","Zm00001d033278_T010","Zm00001d033278","sp|Q9LUI2|NET1A_ARATH Protein NETWORKED 1A OS=Arabidopsis thaliana GN=NET1A PE=1 SV=1//1.04045e-79",0.955486974458,1.276999269E-6]
["LNC_003009","XLOC_029786","lncRNA","Zm00001d008727_T003","Zm00001d008727","sp|Q43270|PLDA1_MAIZE Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1//5.87145e-84",0.983356337879,9.78159331311e-09]
["LNC_003009","XLOC_029786","lncRNA","Zm00001d050810_T001","Zm00001d050810","sp|Q9LSV0|GLYR1_ARATH Glyoxylate/succinic semialdehyde reductase 1 OS=Arabidopsis thaliana GN=GLYR1 PE=1 SV=1//1.22943e-113",0.96488859405,3.96192167962e-07]
["LNC_003009","XLOC_029786","lncRNA","Zm00001d040959_T002","Zm00001d040959",null,0.96561478906,3.57318849176e-07]
["LNC_003009","XLOC_029786","lncRNA","Zm00001d040678_T013","Zm00001d040678",null,0.980565024316,2.11373611947e-08]
["LNC_003008","XLOC_029777","lncRNA","Zm00001d008300_T001","Zm00001d008300","sp|Q96512|PER9_ARATH Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1//4.85104e-141",0.969294343369,2.04167277307E-7]
["LNC_003008","XLOC_029777","lncRNA","Zm00001d013660_T001","Zm00001d013660",null,0.973288373522,1.02404432045E-7]
["LNC_005972","XLOC_059676","lncRNA","Zm00001d042353_T003","Zm00001d042353","sp|P31927|SPSA_MAIZE Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1//0",0.951270546986,1.99345188578e-06]
["LNC_005972","XLOC_059676","lncRNA","Zm00001d046916_T001","Zm00001d046916","sp|B6SZA7|CSPLA_MAIZE CASP-like protein 2C3 OS=Zea mays PE=2 SV=1//7.54492e-59",0.983006364194,1.08478013239e-08]
["LNC_001090","XLOC_010867","lncRNA","GRMZM5G866223_T01","GRMZM5G866223","sp|P46722|NDHI_MAIZE NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Zea mays GN=ndhI PE=3 SV=1//1.07668e-132",0.969830770246,1.87114796102e-07]
["LNC_000458","XLOC_005046","lncRNA","Zm00001d021417_T001","Zm00001d021417",null,0.959543423735,7.97416216614e-07]
["LNC_000784","XLOC_008061","lncRNA","Zm00001d044895_T001","Zm00001d044895","sp|Q9SW08|AB4G_ARATH ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1//1.6962e-156",0.95079076844,2.09183358724E-6]
["LNC_000784","XLOC_008061","lncRNA","Zm00001d027454_T002","Zm00001d027454",null,0.962659201731,5.36965705233e-07]
["LNC_001654","XLOC_015997","lncRNA","Zm00001d012712_T001","Zm00001d012712","sp|Q9XG83|G2OX_PHACN Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1//8.59021e-112",0.973858374104,9.20230946999e-08]
["LNC_001650","XLOC_015995","lncRNA","Zm00001d053845_T001","Zm00001d053845",null,0.970728405517,1.61129877663E-7]
["LNC_001651","XLOC_015995","lncRNA","Zm00001d035044_T009","Zm00001d035044","sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1 PE=1 SV=1//2.80002e-11",0.952848974723,1.69538167016E-6]
["LNC_001651","XLOC_015995","lncRNA","Zm00001d034555_T013","Zm00001d034555","sp|O23081|CRK41_ARATH Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=3 SV=2//6.68749e-49",0.989200653629,1.13606968277E-9]
["LNC_001405","XLOC_014164","lncRNA","Zm00001d045703_T002","Zm00001d045703",null,0.952171783677,1.81858468018E-6]
["LNC_003178","XLOC_031660","lncRNA","Zm00001d041777_T001","Zm00001d041777","sp|Q41761|HGGL2_MAIZE 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 2, chloroplastic OS=Zea mays GN=GLU2 PE=1 SV=1//0",0.954587195484,1.40923716407E-6]
["LNC_003178","XLOC_031660","lncRNA","Zm00001d048592_T001","Zm00001d048592","sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2//0",0.951358534266,1.97581477868E-6]
["LNC_002661","XLOC_026223","lncRNA","Zm00001d018790_T001","Zm00001d018790","sp|Q9LE33|HPR3_ARATH Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana GN=HPR3 PE=2 SV=1//9.1319e-72",0.965120319544,3.83439866081E-7]
["LNC_004932","XLOC_049491","lncRNA","Zm00001d028915_T009","Zm00001d028915","sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2 SV=1//7.47615e-08",0.958658333846,8.87214314016e-07]
["LNC_004930","XLOC_049481","lncRNA","Zm00001d011111_T002","Zm00001d011111",null,0.969348912607,2.02378134695e-07]
["LNC_004931","XLOC_049489","lncRNA","Zm00001d035605_T001","Zm00001d035605","sp|Q4JL76|MYBA2_ORYSJ Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1//2.32326e-50",0.956460991931,1.14515624494e-06]
["LNC_005155","XLOC_051708","lncRNA","Zm00001d014993_T004","Zm00001d014993","sp|P24067|BIP2_MAIZE Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3//0",0.953810993308,1.53184138751E-6]
["LNC_005155","XLOC_051708","lncRNA","Zm00001d026257_T015","Zm00001d026257","sp|Q9C512|MNS1_ARATH Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 OS=Arabidopsis thaliana GN=MNS1 PE=1 SV=1//9.2886e-43",0.953871262404,1.52202903037e-06]
["LNC_002460","XLOC_024574","lncRNA","Zm00001d023479_T002","Zm00001d023479","sp|Q9XIN0|LHW_ARATH Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1//1.33022e-27",0.977011616631,4.86496745111e-08]
["LNC_002460","XLOC_024574","lncRNA","Zm00001d052893_T003","Zm00001d052893","sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3 OS=Arabidopsis thaliana GN=EML3 PE=1 SV=1//1.26302e-08",0.976904046638,4.9789607548e-08]
["LNC_002460","XLOC_024574","lncRNA","Zm00001d024718_T003","Zm00001d024718","sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 SV=1//3.20605e-18",0.976902073271,4.98107166624e-08]
["LNC_005861","XLOC_058468","lncRNA","Zm00001d051671_T035","Zm00001d051671","sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=3 SV=2//1.2863e-25",0.982569077818,1.23081678183E-8]
["LNC_005861","XLOC_058468","lncRNA","Zm00001d044313_T017","Zm00001d044313",null,0.982204176059,1.36431981268E-8]
["LNC_004338","XLOC_043732","lncRNA","Zm00001d030158_T001","Zm00001d030158","sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana GN=NPF8.3 PE=1 SV=1//1.99729e-131",-0.966021469302,3.36913706542e-07]
["LNC_004331","XLOC_043695","lncRNA","Zm00001d020915_T002","Zm00001d020915","sp|Q9LPS9|PRNL1_ARATH Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590 PE=2 SV=1//1.735e-126",0.968941518834,2.16041330381E-7]
["LNC_004333","XLOC_043699","lncRNA","Zm00001d042530_T001","Zm00001d042530","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//3.2525e-12",0.962624377763,5.39442485348e-07]
["LNC_004334","XLOC_043703","lncRNA","Zm00001d021906_T001","Zm00001d021906","sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1//5.74624e-126",0.963772661485,4.6241092555e-07]
["LNC_004334","XLOC_043703","lncRNA","Zm00001d042454_T001","Zm00001d042454",null,0.964283140695,4.31108789112e-07]
["LNC_004334","XLOC_043703","lncRNA","Zm00001d048336_T004","Zm00001d048336","sp|A3C4N5|PP2A4_ORYSJ Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2//6.00205e-26",0.961205061137,6.48389417268e-07]
["LNC_004334","XLOC_043703","lncRNA","Zm00001d029983_T001","Zm00001d029983","sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3//0",0.970662980992,1.62920674285E-7]
["LNC_000323","XLOC_003379","lncRNA","Zm00001d039400_T010","Zm00001d039400","sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens GN=CNOT4 PE=1 SV=3//5.16685e-38",0.95017478545,2.2237486097e-06]
["LNC_001502","XLOC_014823","lncRNA","Zm00001d049151_T001","Zm00001d049151",null,0.99584128927,9.72821823098e-12]
["LNC_001502","XLOC_014823","lncRNA","Zm00001d004541_T001","Zm00001d004541","sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis thaliana GN=At2g28450 PE=1 SV=1//3.44407e-52",0.995840282512,9.73998659504e-12]
["LNC_001503","XLOC_014823","lncRNA","Zm00001d027321_T007","Zm00001d027321","sp|O65220|CPY28_ARATH Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana GN=CYP28 PE=1 SV=1//4.61932e-19",0.970850197971,1.57837928505E-7]
["LNC_003791","XLOC_038503","lncRNA","Zm00001d047105_T001","Zm00001d047105","sp|Q940Y1|ORP2A_ARATH Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1//4.52726e-20",0.965518816426,3.62274608978e-07]
["LNC_003791","XLOC_038503","lncRNA","Zm00001d006625_T008","Zm00001d006625",null,0.979889115199,2.50491907217e-08]
["LNC_003796","XLOC_038533","lncRNA","Zm00001d040409_T001","Zm00001d040409",null,0.958280523268,9.27908322623e-07]
["LNC_003796","XLOC_038533","lncRNA","Zm00001d038054_T005","Zm00001d038054","sp|Q90WJ3|PAXI1_XENLA PAX-interacting protein 1 OS=Xenopus laevis GN=paxip1 PE=1 SV=1//2.86534e-10",0.971358301052,1.44676857605e-07]
["LNC_003795","XLOC_038532","lncRNA","Zm00001d022557_T001","Zm00001d022557","sp|Q9XFB7|NAS9_HORVU Nicotianamine synthase 9 OS=Hordeum vulgare GN=NAS9 PE=1 SV=1//3.76637e-151",0.961213163024,6.47721532854e-07]
["LNC_005307","XLOC_053205","lncRNA","Zm00001d022240_T008","Zm00001d022240",null,0.950859578831,2.07749191627e-06]
["LNC_001860","XLOC_018416","lncRNA","Zm00001d050672_T001","Zm00001d050672",null,0.962460761197,5.51201205568e-07]
["LNC_004207","XLOC_042384","lncRNA","Zm00001d020711_T002","Zm00001d020711","sp|Q6ZDF3|TRAB1_ORYSJ bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1//6.15144e-70",-0.959009856514,8.5063713953e-07]
["LNC_004207","XLOC_042384","lncRNA","Zm00001d027667_T015","Zm00001d027667","sp|Q54GU0|ARSB_DICDI Putative transporter arsB OS=Dictyostelium discoideum GN=arsB PE=2 SV=1//5.6026e-62",-0.957516182396,1.01476677281E-6]
["LNC_001869","XLOC_018475","lncRNA","Zm00001d002815_T001","Zm00001d002815","sp|Q7FB12|NDHM_ORYSJ NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhM PE=2 SV=1//2.13959e-92",0.95738286929,1.03055579892e-06]
["LNC_001869","XLOC_018475","lncRNA","Zm00001d011569_T001","Zm00001d011569","sp|P12403|ATPZ_NOSS1 ATP synthase protein I OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=atpI PE=3 SV=2//6.7685e-09",0.975580592421,6.56399385957e-08]
["LNC_001869","XLOC_018475","lncRNA","Zm00001d025687_T002","Zm00001d025687","sp|Q7XK25|PCH2_ORYSJ Pachytene checkpoint protein 2 homolog OS=Oryza sativa subsp. japonica GN=CRC1 PE=1 SV=4//1.60691e-117",-0.973652776012,9.56660534069e-08]
["LNC_001869","XLOC_018475","lncRNA","Zm00001d003266_T003","Zm00001d003266","sp|F4JRP8|STIL2_ARATH Protein STICHEL-like 2 OS=Arabidopsis thaliana GN=At4g24790 PE=2 SV=1//2.00672e-10",-0.961856024926,5.96442367989e-07]
["LNC_001869","XLOC_018475","lncRNA","Zm00001d005688_T001","Zm00001d005688","sp|Q9ZVX4|U90A1_ARATH UDP-glycosyltransferase 90A1 OS=Arabidopsis thaliana GN=UGT90A1 PE=2 SV=1//5.45041e-97",0.974140732883,8.72009746633e-08]
["LNC_000038","XLOC_000596","lncRNA","Zm00001d010842_T021","Zm00001d010842","sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1//8.24956e-93",0.970397235464,1.70358225748e-07]
["LNC_002681","XLOC_026425","lncRNA","Zm00001d012284_T001","Zm00001d012284",null,0.95765704205,9.98293296472e-07]
["LNC_004141","XLOC_041755","lncRNA","Zm00001d032376_T008","Zm00001d032376","sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1//3.70346e-08",0.953359646932,1.60693115481E-6]
["LNC_005412","XLOC_054476","lncRNA","Zm00001d051419_T001","Zm00001d051419","sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2//2.47879e-07",0.979722111654,2.60993462398e-08]
["LNC_005412","XLOC_054476","lncRNA","Zm00001d014954_T003","Zm00001d014954","sp|Q8H6A5|TCTP_MAIZE Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1//1.8941e-15",-0.957595785557,1.00543091426E-6]
["LNC_005412","XLOC_054476","lncRNA","Zm00001d002068_T001","Zm00001d002068","sp|Q93Y06|Y5720_ARATH Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1//1.13045e-166",0.960127866551,7.42192213687e-07]
["LNC_005411","XLOC_054475","lncRNA","Zm00001d050850_T002","Zm00001d050850","sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2//0",0.953592596331,1.56781975535E-6]
["LNC_005417","XLOC_054522","lncRNA","Zm00001d044765_T001","Zm00001d044765","sp|B6SU46|AAMT2_MAIZE Anthranilate O-methyltransferase 2 OS=Zea mays GN=AAMT2 PE=1 SV=1//0",0.951076049747,2.03288219369E-6]
["LNC_005417","XLOC_054522","lncRNA","Zm00001d010622_T005","Zm00001d010622","sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1//2.26208e-14",0.951031361165,2.0420286635e-06]
["LNC_005417","XLOC_054522","lncRNA","Zm00001d005442_T001","Zm00001d005442","sp|Q86YJ7|AN13B_HUMAN Ankyrin repeat domain-containing protein 13B OS=Homo sapiens GN=ANKRD13B PE=1 SV=4//4.47702e-29",-0.956668826217,1.11847768157E-6]
["LNC_005418","XLOC_054523","lncRNA","Zm00001d018401_T002","Zm00001d018401","sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1//7.71156e-63",0.955673731283,1.25083047209E-6]
["LNC_005418","XLOC_054523","lncRNA","Zm00001d050297_T001","Zm00001d050297",null,0.965815096039,3.47149212931e-07]
["LNC_003584","XLOC_035991","lncRNA","Zm00001d048529_T002","Zm00001d048529","sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana GN=DRG2 PE=2 SV=1//0",0.970398877615,1.70311450942e-07]
["LNC_003584","XLOC_035991","lncRNA","Zm00001d045369_T001","Zm00001d045369",null,0.973622165903,9.6218109924e-08]
["LNC_002459","XLOC_024565","lncRNA","Zm00001d051550_T001","Zm00001d051550","sp|O64747|WRK35_ARATH Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1//5.73311e-55",0.958432578578,9.11356007993e-07]
["LNC_000135","XLOC_001673","lncRNA","Zm00001d030666_T030","Zm00001d030666",null,1,0]
["LNC_000135","XLOC_001673","lncRNA","Zm00001d025817_T038","Zm00001d025817","sp|Q8RWY6|CLASP_ARATH CLIP-associated protein OS=Arabidopsis thaliana GN=CLASP PE=1 SV=1//0",0.995268581192,1.85260695673e-11]
["LNC_005523","XLOC_055258","lncRNA","Zm00001d015955_T007","Zm00001d015955",null,0.950697392646,2.11142070494e-06]
["LNC_004811","XLOC_048094","lncRNA","Zm00001d039685_T001","Zm00001d039685","sp|Q5VQG4|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1//0",0.975293835854,6.95520028238e-08]
["LNC_000137","XLOC_001710","lncRNA","Zm00001d050969_T001","Zm00001d050969","sp|P46280|EFTU2_SOYBN Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1//0",0.953427411804,1.59547472034e-06]
["LNC_005528","XLOC_055290","lncRNA","Zm00001d034522_T002","Zm00001d034522","sp|Q96CN4|EVI5L_HUMAN EVI5-like protein OS=Homo sapiens GN=EVI5L PE=1 SV=1//3.48371e-47",0.975202031659,7.08429197527e-08]
["LNC_006016","XLOC_059962","lncRNA","Zm00001d016702_T006","Zm00001d016702","sp|Q8GW20|Y5390_ARATH Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana GN=At5g03900 PE=2 SV=2//2.77256e-06",0.953705063085,1.54920939588e-06]
["LNC_006016","XLOC_059962","lncRNA","Zm00001d030694_T006","Zm00001d030694","sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1 OS=Arabidopsis thaliana GN=KPNB1 PE=1 SV=1//0",0.95648955736,1.14145981023E-6]
["LNC_006016","XLOC_059962","lncRNA","Zm00001d051203_T001","Zm00001d051203","sp|Q9FN42|CLPP2_ARATH ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1//1.05061e-90",0.964790601868,4.01685266382e-07]
["LNC_006016","XLOC_059962","lncRNA","Zm00001d038091_T006","Zm00001d038091","sp|A8MS41|CCR4D_ARATH Carbon catabolite repressor protein 4 homolog 4 OS=Arabidopsis thaliana GN=CCR4-4 PE=2 SV=1//1.52418e-09",0.966694422621,3.0519256633E-7]
["LNC_006014","XLOC_059953","lncRNA","Zm00001d034929_T006","Zm00001d034929","sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana GN=LUH PE=1 SV=1//1.93944e-07",0.959249811808,8.26364530138E-7]
["LNC_006014","XLOC_059953","lncRNA","Zm00001d008236_T017","Zm00001d008236","sp|A2WNF5|GLU2B_ORYSI Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica GN=OsI_01383 PE=3 SV=1//7.54086e-07",0.959249811808,8.26364530138E-7]
["LNC_006012","XLOC_059946","lncRNA","Zm00001d037043_T001","Zm00001d037043",null,0.956338689564,1.1610900621E-6]
["LNC_006010","XLOC_059930","lncRNA","Zm00001d051554_T002","Zm00001d051554","sp|Q05JG2|ABAH1_ORYSJ Abscisic acid 8&apos;-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1//1.36759e-61",0.956481185868,1.14254211847e-06]
["LNC_006010","XLOC_059930","lncRNA","Zm00001d039657_T001","Zm00001d039657","sp|Q9XI29|Y1540_ARATH Uncharacterized protein At1g15400 OS=Arabidopsis thaliana GN=At1g15400 PE=1 SV=2//1.92703e-08",0.950347631198,2.18608570757e-06]
["LNC_002647","XLOC_026133","lncRNA","Zm00001d011784_T001","Zm00001d011784",null,0.998490000063,6.17284001692e-14]
["LNC_002647","XLOC_026133","lncRNA","Zm00001d007121_T036","Zm00001d007121","sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1//6.02865e-17",0.976885297103,4.99904584395e-08]
["LNC_003251","XLOC_032190","lncRNA","Zm00001d037695_T003","Zm00001d037695","sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1//2.35322e-49",0.966010627609,3.37445375642e-07]
["LNC_003498","XLOC_035158","lncRNA","Zm00001d019922_T010","Zm00001d019922","sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3 OS=Arabidopsis thaliana GN=EML3 PE=1 SV=1//2.47392e-56",0.978773861935,3.27475704331e-08]
["LNC_003498","XLOC_035158","lncRNA","Zm00001d005451_T065","Zm00001d005451","sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1//4.80762e-37",0.98538193276,5.12967535116e-09]
["LNC_003499","XLOC_035158","lncRNA","Zm00001d024241_T002","Zm00001d024241",null,0.981941838914,1.46724319361e-08]
["LNC_003499","XLOC_035158","lncRNA","Zm00001d020438_T001","Zm00001d020438","sp|Q6P4K8|PIN4_XENTR Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Xenopus tropicalis GN=pin4 PE=2 SV=1//1.16375e-10",0.981974466962,1.45411531705E-8]
["LNC_003499","XLOC_035158","lncRNA","Zm00001d038861_T001","Zm00001d038861","sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1//1.59529e-20",-0.957984915081,9.60770381927e-07]
["LNC_003499","XLOC_035158","lncRNA","Zm00001d014674_T001","Zm00001d014674","sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2//4.76817e-15",0.952909170773,1.68475919748e-06]
["LNC_003499","XLOC_035158","lncRNA","Zm00001d005795_T002","Zm00001d005795","sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1//5.77324e-94",-0.950068402391,2.24718393655e-06]
["LNC_003499","XLOC_035158","lncRNA","Zm00001d006402_T003","Zm00001d006402","sp|P00827|ATPB_MAIZE ATP synthase subunit beta, chloroplastic OS=Zea mays GN=atpB PE=3 SV=1//0",0.969639578293,1.93057205555E-7]
["LNC_003499","XLOC_035158","lncRNA","Zm00001d011673_T001","Zm00001d011673","sp|P49353|FPPS_MAIZE Farnesyl pyrophosphate synthase OS=Zea mays GN=FPS PE=2 SV=1//0",0.962623566384,5.39500300878e-07]
["LNC_000721","XLOC_007441","lncRNA","Zm00001d048334_T001","Zm00001d048334",null,0.966014220419,3.3726911286e-07]
["LNC_005638","XLOC_056360","lncRNA","Zm00001d024037_T004","Zm00001d024037","sp|Q41761|HGGL2_MAIZE 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 2, chloroplastic OS=Zea mays GN=GLU2 PE=1 SV=1//0",0.989423727149,1.02386565892e-09]
["LNC_005636","XLOC_056360","lncRNA","Zm00001d020957_T001","Zm00001d020957","sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1//1.1467e-62",0.975648129659,6.47445927981e-08]
["LNC_005636","XLOC_056360","lncRNA","Zm00001d044201_T008","Zm00001d044201","sp|A2ZVG7|FTSH9_ORYSJ ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1//6.10764e-28",0.963088100123,5.07195564659e-07]
["LNC_005636","XLOC_056360","lncRNA","Zm00001d051976_T001","Zm00001d051976","sp|Q0WVX5|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS4 PE=2 SV=1//5.44743e-70",0.975540208427,6.61800059198e-08]
["LNC_005636","XLOC_056360","lncRNA","Zm00001d053652_T002","Zm00001d053652","sp|Q944B0|FK161_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1//4.41016e-65",0.976898065555,4.98536087967e-08]
["LNC_005636","XLOC_056360","lncRNA","Zm00001d018660_T001","Zm00001d018660","sp|Q84P23|4CLL9_ARATH 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2//8.35449e-136",0.957746756636,9.87912413875e-07]
["LNC_005637","XLOC_056360","lncRNA","Zm00001d021850_T001","Zm00001d021850","sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1//9.50274e-30",0.982073654985,1.41478131432e-08]
["LNC_005637","XLOC_056360","lncRNA","Zm00001d039029_T004","Zm00001d039029","sp|P46314|YCF23_ANTSP Uncharacterized protein ycf23 OS=Antithamnion sp. GN=ycf23 PE=3 SV=1//1.68499e-20",0.97412828204,8.74092747072e-08]
["LNC_005637","XLOC_056360","lncRNA","Zm00001d034897_T001","Zm00001d034897","sp|P19954|PRSP1_SPIOL Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea GN=PSRP1 PE=1 SV=2//1.16945e-82",0.952542691569,1.75025587046e-06]
["LNC_001461","XLOC_014591","lncRNA","Zm00001d043405_T002","Zm00001d043405","sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana GN=EMB1417 PE=2 SV=1//6.41753e-80",0.951991272045,1.85259512531e-06]
["LNC_001815","XLOC_018081","lncRNA","Zm00001d031873_T001","Zm00001d031873","sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic OS=Arabidopsis thaliana GN=RNE PE=1 SV=1//2.21591e-27",0.957048598138,1.07100436386E-6]
["LNC_001465","XLOC_014619","lncRNA","Zm00001d041889_T061","Zm00001d041889",null,0.999854005386,0]
["LNC_001465","XLOC_014619","lncRNA","Zm00001d034640_T021","Zm00001d034640","sp|P42744|ULA1_ARATH NEDD8-activating enzyme E1 regulatory subunit OS=Arabidopsis thaliana GN=AXR1 PE=1 SV=1//4.74951e-36",0.992035640006,2.49018361487e-10]
["LNC_005170","XLOC_051887","lncRNA","Zm00001d033287_T002","Zm00001d033287","sp|Q75WU1|GG1_ORYSJ Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japonica GN=RGG1 PE=1 SV=1//2.61796e-20",-0.961345348275,6.36901751001e-07]
["LNC_005170","XLOC_051887","lncRNA","Zm00001d013302_T005","Zm00001d013302","sp|O74873|SC231_SCHPO Protein transport protein sec23-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec231 PE=3 SV=1//0",-0.964580428346,4.13671136878e-07]
["LNC_005170","XLOC_051887","lncRNA","Zm00001d028423_T001","Zm00001d028423","sp|Q9LXU9|IRKI_ARATH IRK-interacting protein OS=Arabidopsis thaliana GN=IRKI PE=1 SV=1//1.14104e-33",0.964720222229,4.05667733183e-07]
["LNC_005170","XLOC_051887","lncRNA","Zm00001d010730_T001","Zm00001d010730","sp|Q9FME3|TCP5_ARATH Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=2 SV=1//3.42266e-32",0.966840232517,2.98643723085e-07]
["LNC_002228","XLOC_022070","lncRNA","Zm00001d013495_T003","Zm00001d013495","sp|Q5ZJW8|DTL_CHICK Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1//8.99731e-59",0.960208116128,7.34853056628e-07]
["LNC_002228","XLOC_022070","lncRNA","Zm00001d022390_T001","Zm00001d022390","sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1//7.92375e-34",0.963539718109,4.77282024125e-07]
["LNC_001535","XLOC_014970","lncRNA","Zm00001d021703_T001","Zm00001d021703","sp|Q41048|PSBQ1_MAIZE Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1//8.66489e-127",0.972153642636,1.25843008014E-7]
["LNC_001535","XLOC_014970","lncRNA","Zm00001d000401_T002","Zm00001d000401",null,0.97299277667,1.08143543898e-07]
["LNC_000557","XLOC_006147","lncRNA","Zm00001d018613_T011","Zm00001d018613","sp|Q9LHL3|LRP6C_ARATH La-related protein 6C OS=Arabidopsis thaliana GN=LARP6C PE=3 SV=1//1.49826e-66",0.964118363751,4.41022597109e-07]
["LNC_001790","XLOC_017873","lncRNA","Zm00001d024134_T001","Zm00001d024134","sp|Q9SAH3|Y1887_ARATH Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana GN=At1g80870 PE=3 SV=1//2.35138e-25",-0.960475301304,7.10832371888e-07]
["LNC_001790","XLOC_017873","lncRNA","Zm00001d044310_T001","Zm00001d044310",null,0.982992163808,1.08929414377E-8]
["LNC_001790","XLOC_017873","lncRNA","Zm00001d007111_T001","Zm00001d007111","sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1//0",-0.953670584248,1.55489602291E-6]
["LNC_001790","XLOC_017873","lncRNA","Zm00001d036145_T003","Zm00001d036145","sp|Q9XIK3|ISCAP_ARATH Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA PE=2 SV=2//9.73975e-47",0.975535369661,6.62449530786e-08]
["LNC_001790","XLOC_017873","lncRNA","Zm00001d037025_T001","Zm00001d037025","sp|Q9FJ45|GDL83_ARATH GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana GN=At5g45910 PE=2 SV=1//2.11303e-98",0.950053892578,2.25039544866e-06]
["LNC_005899","XLOC_058917","lncRNA","Zm00001d007255_T002","Zm00001d007255","sp|Q93VV5|PTR16_ARATH Protein NRT1/ PTR FAMILY 4.3 OS=Arabidopsis thaliana GN=NPF4.3 PE=2 SV=1//0",0.954272919244,1.45790211414E-6]
["LNC_002206","XLOC_021953","lncRNA","Zm00001d028986_T002","Zm00001d028986","sp|A2XG77|WOX6_ORYSI WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica GN=WOX6 PE=3 SV=1//9.5359e-27",-0.957713597273,9.91739250782e-07]
["LNC_002206","XLOC_021953","lncRNA","Zm00001d026490_T012","Zm00001d026490","sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1//0",-0.954848286444,1.3697961788e-06]
["LNC_002206","XLOC_021953","lncRNA","Zm00001d015060_T001","Zm00001d015060","sp|Q8W4G3|MATE4_ARATH MATE efflux family protein 4, chloroplastic OS=Arabidopsis thaliana GN=DTX46 PE=2 SV=1//0",0.967709764098,2.61872212359e-07]
["LNC_002206","XLOC_021953","lncRNA","Zm00001d008497_T003","Zm00001d008497","sp|C0ZB13|SYL_BREBN Leucine--tRNA ligase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=leuS PE=3 SV=1//2.26356e-06",0.956981207143,1.07930958393e-06]
["LNC_002207","XLOC_021954","lncRNA","Zm00001d004279_T001","Zm00001d004279","sp|Q6PWU2|ATESY_VITVI (-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1//1.23527e-118",0.982329590131,1.31719535279E-8]
["LNC_002202","XLOC_021932","lncRNA","Zm00001d011285_T001","Zm00001d011285","sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2//3.32019e-179",0.956765823489,1.10619679061E-6]
["LNC_002202","XLOC_021932","lncRNA","Zm00001d024105_T001","Zm00001d024105",null,0.98719204438,2.65678412603E-9]
["LNC_002202","XLOC_021932","lncRNA","Zm00001d043170_T001","Zm00001d043170","sp|P82244|RK34_SPIOL 50S ribosomal protein L34, chloroplastic OS=Spinacia oleracea GN=RPL34 PE=1 SV=1//5.17888e-25",0.978888028066,3.18824340262E-8]
["LNC_002200","XLOC_021918","lncRNA","Zm00001d014428_T002","Zm00001d014428","sp|Q9M9M9|NDUAC_ARATH Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=1 SV=1//2.3284e-44",0.974438521051,8.23356356427e-08]
["LNC_000995","XLOC_010163","lncRNA","Zm00001d022315_T003","Zm00001d022315","sp|O48791|SCAB1_ARATH Stomatal closure-related actin-binding protein 1 OS=Arabidopsis thaliana GN=SCAB1 PE=1 SV=1//1.34202e-173",0.970322847416,1.72487824468E-7]
["LNC_005946","XLOC_059484","lncRNA","Zm00001d018650_T001","Zm00001d018650","sp|Q9FLK4|GSXL8_ARATH Flavin-containing monooxygenase FMO GS-OX-like 8 OS=Arabidopsis thaliana GN=At5g61290 PE=2 SV=1//2.01637e-129",0.954470580276,1.42714189488e-06]
["LNC_005095","XLOC_051119","lncRNA","Zm00001d033328_T001","Zm00001d033328","sp|Q6AV34|ARGC_ORYSJ Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0617900 PE=1 SV=1//0",0.951153452782,2.01711691528e-06]
["LNC_001083","XLOC_010802","lncRNA","Zm00001d025739_T003","Zm00001d025739","sp|Q7XUF4|CDKG2_ORYSJ Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2//0",0.950181699052,2.2222323337e-06]
["LNC_001531","XLOC_014960","lncRNA","Zm00001d003817_T007","Zm00001d003817","sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1//2.95855e-28",0.999995579494,0]
["LNC_001643","XLOC_015947","lncRNA","Zm00001d043954_T007","Zm00001d043954","sp|Q5SN53|MPK8_ORYSJ Mitogen-activated protein kinase 8 OS=Oryza sativa subsp. japonica GN=MPK8 PE=2 SV=2//0",0.987407168548,2.4419153366e-09]
["LNC_001643","XLOC_015947","lncRNA","Zm00001d042540_T010","Zm00001d042540","sp|P29250|LOX2_ORYSJ Linoleate 9S-lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2//0",0.990529116626,5.90656856758e-10]
["LNC_001119","XLOC_011168","lncRNA","Zm00001d018407_T001","Zm00001d018407",null,0.953446725714,1.59222137786e-06]
["LNC_001647","XLOC_015973","lncRNA","Zm00001d030995_T010","Zm00001d030995","sp|P12959|OP2_MAIZE Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1//2.29438e-09",0.970458423769,1.68622245056E-7]
["LNC_001647","XLOC_015973","lncRNA","Zm00001d039066_T005","Zm00001d039066","sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1//1.30683e-06",0.964765012267,4.03129653215e-07]
["LNC_001646","XLOC_015970","lncRNA","Zm00001d038489_T001","Zm00001d038489",null,0.968220160092,2.42028131092e-07]
["LNC_001646","XLOC_015970","lncRNA","Zm00001d037961_T007","Zm00001d037961","sp|P43279|MAOC_ORYSJ NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2//0",0.976241416816,5.7289889499E-8]
["LNC_001646","XLOC_015970","lncRNA","Zm00001d047153_T019","Zm00001d047153",null,0.9600756822,7.46995849177e-07]
["LNC_001646","XLOC_015970","lncRNA","Zm00001d033057_T003","Zm00001d033057",null,0.953613049038,1.56442222976E-6]
["LNC_001649","XLOC_015995","lncRNA","Zm00001d035491_T002","Zm00001d035491","sp|Q9FKK6|EXO5_ARATH Exonuclease V, chloroplastic OS=Arabidopsis thaliana GN=At5g60370 PE=2 SV=1//1.66697e-30",0.95829403854,9.26427493386e-07]
["LNC_002516","XLOC_025063","lncRNA","Zm00001d033984_T001","Zm00001d033984","sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus GN=Wdfy3 PE=1 SV=1//2.32461e-18",0.95260391128,1.73917654944e-06]
["LNC_002515","XLOC_025034","lncRNA","Zm00001d006116_T001","Zm00001d006116","sp|Q9SXZ2|FT_ARATH Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2//2.37966e-78",0.961108828739,6.56364332663e-07]
["LNC_003108","XLOC_031020","lncRNA","Zm00001d013667_T001","Zm00001d013667","sp|Q9LW00|MBD11_ARATH Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana GN=MBD11 PE=1 SV=1//3.07403e-23",0.950160407154,2.22690465446e-06]
["LNC_003109","XLOC_031026","lncRNA","Zm00001d029150_T001","Zm00001d029150","sp|B6SZW0|DCVR_MAIZE Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic OS=Zea mays GN=DVR PE=1 SV=1//0",0.963505707114,4.79484717264e-07]
["LNC_003109","XLOC_031026","lncRNA","Zm00001d018412_T001","Zm00001d018412","sp|Q8L803|RK9_WHEAT 50S ribosomal protein L9, chloroplastic OS=Triticum aestivum GN=RPL9 PE=2 SV=1//1.69614e-40",0.966477353524,3.15153010355E-7]
["LNC_003102","XLOC_030887","lncRNA","Zm00001d016306_T001","Zm00001d016306","sp|O65451|FB333_ARATH Probable F-box protein At4g22030 OS=Arabidopsis thaliana GN=At4g22030 PE=4 SV=1//7.06463e-21",0.966097429238,3.33207340386E-7]
["LNC_003103","XLOC_030895","lncRNA","Zm00001d023530_T003","Zm00001d023530",null,0.958674334067,8.85522766891e-07]
["LNC_003100","XLOC_030857","lncRNA","Zm00001d027416_T001","Zm00001d027416","sp|P73245|Y1917_SYNY3 Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1917 PE=2 SV=1//6.38731e-91",0.965541354762,3.61105911395e-07]
["LNC_003100","XLOC_030857","lncRNA","Zm00001d009189_T001","Zm00001d009189",null,0.957135417408,1.06037969783e-06]
["LNC_003803","XLOC_038568","lncRNA","Zm00001d043465_T003","Zm00001d043465","sp|P12629|RK13_SPIOL 50S ribosomal protein L13, chloroplastic OS=Spinacia oleracea GN=RPL13 PE=1 SV=1//5.42726e-86",0.970705602523,1.61752252037e-07]
["LNC_004925","XLOC_049424","lncRNA","Zm00001d019108_T019","Zm00001d019108","sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp5 PE=1 SV=1//7.90867e-12",0.964878201894,3.9677186825E-7]
["LNC_004925","XLOC_049424","lncRNA","Zm00001d018318_T011","Zm00001d018318","sp|Q9FPR3|EDR1_ARATH Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1//2.6313e-36",0.964848485409,3.98433249504e-07]
["LNC_002676","XLOC_026388","lncRNA","Zm00001d004564_T021","Zm00001d004564","sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1//1.67583e-09",0.978403999384,3.56796761025e-08]
["LNC_002472","XLOC_024705","lncRNA","Zm00001d002340_T003","Zm00001d002340","sp|Q5R6Z6|RCD1_PONAB Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2//1.58587e-53",0.974714245661,7.80259474809e-08]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d018959_T001","Zm00001d018959","sp|Q9M1H3|AB4F_ARATH ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1//2.65009e-07",0.97292534317,1.09487970246E-7]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d027293_T002","Zm00001d027293","sp|Q9U5L1|SRPR_DROME Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster GN=Gtp-bp PE=1 SV=2//8.63077e-14",0.965012624317,3.89325290673e-07]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d041988_T001","Zm00001d041988","sp|Q680B9|PRRP2_ARATH Proteinaceous RNase P 2 OS=Arabidopsis thaliana GN=PRORP2 PE=1 SV=1//8.40421e-128",0.985541626817,4.85683648854E-9]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d045373_T001","Zm00001d045373","sp|Q0J6P7|KAD5_ORYSJ Probable adenylate kinase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0288200 PE=2 SV=2//5.25489e-06",0.992480453993,1.86963999838e-10]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d033018_T001","Zm00001d033018","sp|Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1//1.7653e-126",0.956737776343,1.10973680068E-6]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d012178_T001","Zm00001d012178","sp|Q56XR7|STR4A_ARATH Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana GN=STR4A PE=2 SV=1//1.1706e-52",0.954130487912,1.4803917765E-6]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d002139_T001","Zm00001d002139","sp|Q9FNP9|AGCT_ARATH Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1//1.50736e-26",0.977955250427,3.95141424026e-08]
["LNC_002476","XLOC_024740","lncRNA","Zm00001d051851_T005","Zm00001d051851","sp|Q0J9V5|CXXS1_ORYSJ Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 PE=2 SV=1//1.57678e-13",0.98391698086,8.24919155207e-09]
["LNC_002479","XLOC_024741","lncRNA","Zm00001d033155_T001","Zm00001d033155","sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic OS=Arabidopsis thaliana GN=CBSDUFCH2 PE=2 SV=2//0",0.960354191754,7.21641893353e-07]
["LNC_002479","XLOC_024741","lncRNA","Zm00001d037856_T001","Zm00001d037856","sp|Q1JPN0|STR7_ARATH Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana GN=STR7 PE=2 SV=1//2.85844e-168",0.965153089249,3.81663149751e-07]
["LNC_002478","XLOC_024740","lncRNA","Zm00001d008203_T001","Zm00001d008203","sp|Q9AR38|PPOC_ORYSJ Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=PPOX1 PE=2 SV=1//4.66146e-39",0.961055917893,6.6078221761e-07]
["LNC_000680","XLOC_007100","lncRNA","Zm00001d014991_T004","Zm00001d014991","sp|Q49XT0|RS1_STAS1 30S ribosomal protein S1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsA PE=3 SV=1//2.76182e-11",0.990992106561,4.60082194564e-10]
["LNC_000680","XLOC_007100","lncRNA","Zm00001d025770_T001","Zm00001d025770","sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1//2.25228e-40",0.956385382306,1.15498619557E-6]
["LNC_000680","XLOC_007100","lncRNA","Zm00001d024718_T004","Zm00001d024718","sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 SV=1//3.20605e-18",0.957546964348,1.01114853868E-6]
["LNC_000680","XLOC_007100","lncRNA","Zm00001d029674_T001","Zm00001d029674","sp|Q9FJ81|CCB2_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana GN=CCB2 PE=1 SV=1//1.85921e-79",0.992362666122,2.0203350104E-10]
["LNC_000680","XLOC_007100","lncRNA","GRMZM5G877454_T01","GRMZM5G877454","sp|P16023|RPOB_MAIZE DNA-directed RNA polymerase subunit beta OS=Zea mays GN=rpoB PE=3 SV=1//0",0.967662014694,2.63792918398e-07]
["LNC_001251","XLOC_012382","lncRNA","Zm00001d029257_T001","Zm00001d029257",null,0.959057495259,8.45773775682e-07]
["LNC_001251","XLOC_012382","lncRNA","Zm00001d028880_T001","Zm00001d028880","sp|O22914|CP121_ARATH Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana GN=CP12-1 PE=1 SV=1//9.1148e-35",0.955213560253,1.31609263088E-6]
["LNC_001251","XLOC_012382","lncRNA","Zm00001d042185_T013","Zm00001d042185","sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1//1.72527e-40",-0.957002361525,1.07669704567e-06]
["LNC_001252","XLOC_012385","lncRNA","Zm00001d031822_T001","Zm00001d031822",null,0.953769003658,1.53870730335e-06]
["LNC_004324","XLOC_043611","lncRNA","Zm00001d013226_T001","Zm00001d013226","sp|P93147|C81E1_GLYEC Isoflavone 2&apos;-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2//4.21705e-18",0.956899107123,1.08949654232E-6]
["LNC_004854","XLOC_048668","lncRNA","Zm00001d001914_T003","Zm00001d001914","sp|Q7XR80|ARP8_ORYSJ Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1//0",0.953994307729,1.5021509947E-6]
["LNC_004854","XLOC_048668","lncRNA","Zm00001d038163_T002","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.954374978606,1.44195453133e-06]
["LNC_000350","XLOC_003713","lncRNA","Zm00001d047894_T002","Zm00001d047894","sp|Q9FN50|CPP1_ARATH Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana GN=CPP1 PE=1 SV=1//4.22646e-21",0.95869516662,8.8332418402e-07]
["LNC_000350","XLOC_003713","lncRNA","Zm00001d037476_T001","Zm00001d037476","sp|Q9FKC3|PP424_ARATH Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2//1.5647e-07",0.962857236982,5.23052157142E-7]
["LNC_000350","XLOC_003713","lncRNA","Zm00001d027309_T008","Zm00001d027309","sp|G4LTX4|DSP4_CASSA Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa GN=DSP4 PE=1 SV=1//7.00096e-38",0.956416336733,1.15095376829E-6]
["LNC_004407","XLOC_044205","lncRNA","Zm00001d045938_T005","Zm00001d045938",null,0.986820556085,3.06317904375e-09]
["LNC_004407","XLOC_044205","lncRNA","Zm00001d021245_T001","Zm00001d021245","sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1//5.01509e-88",0.969874288177,1.857827856E-7]
["LNC_004407","XLOC_044205","lncRNA","Zm00001d037473_T008","Zm00001d037473","sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=3 SV=2//8.65638e-21",0.961080966026,6.58687843824e-07]
["LNC_004407","XLOC_044205","lncRNA","Zm00001d039339_T001","Zm00001d039339",null,0.964378706007,4.25440807472E-7]
["LNC_004407","XLOC_044205","lncRNA","Zm00001d020409_T003","Zm00001d020409","sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1//3.41516e-08",0.973368969712,1.00882506793E-7]
["LNC_001118","XLOC_011168","lncRNA","Zm00001d018605_T001","Zm00001d018605","sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2//5.75478e-20",0.950313051854,2.19357972764e-06]
["LNC_001203","XLOC_011918","lncRNA","Zm00001d006008_T002","Zm00001d006008","sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=3 SV=2//0",0.950644750875,2.12252712761e-06]
["LNC_001326","XLOC_013137","lncRNA","Zm00001d012177_T001","Zm00001d012177","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//0",0.950306544536,2.19499226528e-06]
["LNC_001326","XLOC_013137","lncRNA","Zm00001d032399_T001","Zm00001d032399","sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1//0",0.986086239703,4.01213240409e-09]
["LNC_001323","XLOC_013093","lncRNA","Zm00001d014862_T008","Zm00001d014862","sp|B3LF48|EHD2_ARATH EH domain-containing protein 2 OS=Arabidopsis thaliana GN=EHD2 PE=1 SV=1//3.64637e-14",-0.965402174223,3.6837110584e-07]
["LNC_001323","XLOC_013093","lncRNA","Zm00001d030398_T003","Zm00001d030398","sp|Q0WLC6|PP349_ARATH Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana GN=MRL1 PE=2 SV=2//7.50587e-17",0.951837135065,1.88203389584E-6]
["LNC_005525","XLOC_055267","lncRNA","Zm00001d012774_T001","Zm00001d012774","sp|Q9FFW5|PERK8_ARATH Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana GN=PERK8 PE=1 SV=1//2.04925e-166",0.957197431966,1.05284192564e-06]
["LNC_005525","XLOC_055267","lncRNA","Zm00001d013367_T002","Zm00001d013367","sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1//3.69142e-13",0.977357636385,4.51231321197e-08]
["LNC_002696","XLOC_026675","lncRNA","Zm00001d045635_T001","Zm00001d045635","sp|Q9M658|MOM1_ARATH Helicase protein MOM1 OS=Arabidopsis thaliana GN=MOM1 PE=1 SV=1//4.13613e-83",0.953133816108,1.64558252402E-6]
["LNC_000308","XLOC_003221","lncRNA","Zm00001d015613_T001","Zm00001d015613","sp|Q9SHU7|TIC21_ARATH Protein TIC 21, chloroplastic OS=Arabidopsis thaliana GN=TIC21 PE=1 SV=1//2.26512e-82",0.960341235037,7.22806021702e-07]
["LNC_006063","XLOC_060273","lncRNA","Zm00001d014791_T001","Zm00001d014791","sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1//8.0947e-40",0.967408478257,2.74179966731e-07]
["LNC_006063","XLOC_060273","lncRNA","Zm00001d004908_T001","Zm00001d004908",null,0.957956414107,9.63986968028e-07]
["LNC_006063","XLOC_060273","lncRNA","Zm00001d021286_T001","Zm00001d021286","sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=2 SV=1//2.15563e-95",0.978983737273,3.11712882173e-08]
["LNC_000126","XLOC_001587","lncRNA","Zm00001d029066_T005","Zm00001d029066",null,0.999218367167,2.22044604925e-15]
["LNC_000126","XLOC_001587","lncRNA","Zm00001d041656_T001","Zm00001d041656","sp|P32024|JI23_HORVU 23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1//5.02247e-22",0.953526683448,1.57880880969e-06]
["LNC_003671","XLOC_036891","lncRNA","Zm00001d043110_T015","Zm00001d043110","sp|Q5JK35|BGL05_ORYSJ Beta-glucosidase 5 OS=Oryza sativa subsp. japonica GN=BGLU5 PE=2 SV=1//2.74413e-06",0.95489546495,1.36276371809E-6]
["LNC_003671","XLOC_036891","lncRNA","Zm00001d035512_T003","Zm00001d035512","sp|P47927|AP2_ARATH Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1//1.65377e-07",0.9604329801,7.14594985629e-07]
["LNC_005988","XLOC_059768","lncRNA","Zm00001d051796_T002","Zm00001d051796","sp|E2RBS6|SETD3_CANFA Histone-lysine N-methyltransferase setd3 OS=Canis familiaris GN=SETD3 PE=3 SV=1//1.90208e-11",0.956730118045,1.11070496489E-6]
["LNC_005988","XLOC_059768","lncRNA","Zm00001d047759_T003","Zm00001d047759","sp|Q8GYL7|PP361_ARATH Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana GN=At5g02830 PE=2 SV=3//8.48615e-66",0.962529747418,5.46218755115e-07]
["LNC_002714","XLOC_026999","lncRNA","Zm00001d018193_T001","Zm00001d018193",null,0.95743810214,1.02399076818E-6]
["LNC_000854","XLOC_008805","lncRNA","Zm00001d043207_T002","Zm00001d043207",null,0.968663887804,2.25765705464e-07]
["LNC_000854","XLOC_008805","lncRNA","Zm00001d005080_T002","Zm00001d005080","sp|Q84K71|MATE2_ARATH MATE efflux family protein 2, chloroplastic OS=Arabidopsis thaliana GN=DTX44 PE=2 SV=1//2.53453e-10",0.956938046573,1.08465546811e-06]
["LNC_000854","XLOC_008805","lncRNA","Zm00001d038337_T003","Zm00001d038337","sp|Q8H1F6|DGP3_ARATH DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana GN=DGP3 PE=2 SV=1//2.54877e-155",0.966585152421,3.10174742113e-07]
["LNC_000854","XLOC_008805","lncRNA","Zm00001d046683_T002","Zm00001d046683","sp|P31828|PQQL_ECOLI Probable zinc protease PqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2//4.86741e-28",0.966328037275,3.22153353549e-07]
["LNC_004683","XLOC_046961","lncRNA","Zm00001d000987_T001","Zm00001d000987",null,0.971043806385,1.52715243118e-07]
["LNC_004686","XLOC_047020","lncRNA","Zm00001d023698_T006","Zm00001d023698","sp|Q2QWT4|DPNP_ORYSJ 3&apos;(2&apos;),5&apos;-bisphosphate nucleotidase OS=Oryza sativa subsp. japonica GN=Os12g0183300 PE=2 SV=1//3.34228e-08",0.957869997675,9.73792133152e-07]
["LNC_004686","XLOC_047020","lncRNA","Zm00001d010340_T001","Zm00001d010340",null,0.962185488345,5.71443352193e-07]
["LNC_004686","XLOC_047020","lncRNA","Zm00001d001860_T001","Zm00001d001860","sp|Q680K2|GPPL1_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana GN=At4g39970 PE=2 SV=1//5.38221e-134",0.952691697527,1.72338648419e-06]
["LNC_004686","XLOC_047020","lncRNA","Zm00001d016999_T003","Zm00001d016999",null,0.968042099932,2.48810112735e-07]
["LNC_004686","XLOC_047020","lncRNA","Zm00001d045539_T001","Zm00001d045539","sp|O04066|ACBP_RICCO Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1//8.2403e-43",0.973362596243,1.01002199271E-7]
["LNC_004686","XLOC_047020","lncRNA","Zm00001d030859_T002","Zm00001d030859","sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1//4.11824e-27",0.972419009713,1.20013618821e-07]
["LNC_004687","XLOC_047021","lncRNA","Zm00001d010942_T001","Zm00001d010942","sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1//2.64067e-28",0.950905038482,2.0680599353e-06]
["LNC_000918","XLOC_009420","lncRNA","Zm00001d010314_T001","Zm00001d010314","sp|Q93W28|Y4554_ARATH Uncharacterized protein At4g15545 OS=Arabidopsis thaliana GN=At4g15545 PE=1 SV=1//6.85647e-76",0.963931491016,4.52484238078e-07]
["LNC_000918","XLOC_009420","lncRNA","Zm00001d044558_T001","Zm00001d044558","sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1//3.36346e-56",0.95662914355,1.12353302173E-6]
["LNC_000918","XLOC_009420","lncRNA","Zm00001d022110_T001","Zm00001d022110","sp|B8B8C5|ALFL9_ORYSI PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 SV=1//4.41017e-22",0.955014942025,1.34508249294E-6]
["LNC_000918","XLOC_009420","lncRNA","Zm00001d003534_T001","Zm00001d003534","sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1//5.07098e-88",0.951701040684,1.90833403457e-06]
["LNC_000306","XLOC_003208","lncRNA","Zm00001d011183_T001","Zm00001d011183","sp|Q41738|THI41_MAIZE Thiamine thiazole synthase 1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1//0",0.950346101784,2.18641673166e-06]
["LNC_000306","XLOC_003208","lncRNA","Zm00001d014811_T001","Zm00001d014811","sp|Q9D113|DNLZ_MOUSE DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=2 SV=1//7.41725e-08",0.954390226494,1.43958386367e-06]
["LNC_000306","XLOC_003208","lncRNA","Zm00001d000260_T001","Zm00001d000260","sp|A1E9Q9|PSBD_SORBI Photosystem II D2 protein OS=Sorghum bicolor GN=psbD PE=3 SV=1//0",0.953960722313,1.5075561719e-06]
["LNC_004044","XLOC_041044","lncRNA","Zm00001d029505_T001","Zm00001d029505","sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1//3.92114e-67",0.952187501668,1.81564684132E-6]
["LNC_004045","XLOC_041059","lncRNA","Zm00001d028989_T001","Zm00001d028989",null,0.961376957644,6.34335828753e-07]
["LNC_000914","XLOC_009383","lncRNA","Zm00001d030032_T001","Zm00001d030032",null,0.952787956368,1.70620341189E-6]
["LNC_000914","XLOC_009383","lncRNA","Zm00001d030507_T001","Zm00001d030507","sp|Q9FGG3|WTR45_ARATH WAT1-related protein At5g64700 OS=Arabidopsis thaliana GN=At5g64700 PE=2 SV=1//7.25994e-62",0.985049107472,5.73764169509e-09]
["LNC_000914","XLOC_009383","lncRNA","Zm00001d044302_T001","Zm00001d044302",null,0.971723396841,1.35771473397E-7]
["LNC_005532","XLOC_055304","lncRNA","Zm00001d002101_T001","Zm00001d002101","sp|Q0JH50|GAOX2_ORYSJ Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1//4.24752e-16",0.98113800238,1.82174240138E-8]
["LNC_005532","XLOC_055304","lncRNA","Zm00001d052889_T001","Zm00001d052889","sp|Q9LXU9|IRKI_ARATH IRK-interacting protein OS=Arabidopsis thaliana GN=IRKI PE=1 SV=1//1.20422e-140",0.968527503865,2.30668577572e-07]
["LNC_005539","XLOC_055399","lncRNA","Zm00001d043047_T001","Zm00001d043047","sp|Q40636|EXPA2_ORYSJ Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2//3.19871e-128",0.962161579745,5.73228966072e-07]
["LNC_005539","XLOC_055399","lncRNA","Zm00001d044982_T005","Zm00001d044982","sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1//2.3018e-105",0.95801164501,9.57761424836e-07]
["LNC_005539","XLOC_055399","lncRNA","Zm00001d003016_T001","Zm00001d003016","sp|P14717|PAL1_ORYSJ Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2//0",0.957700323632,9.93274422711e-07]
["LNC_005538","XLOC_055393","lncRNA","Zm00001d022388_T012","Zm00001d022388","sp|P23225|GLTB_MAIZE Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1//2.22116e-08",0.9613551429,6.3610578227e-07]
["LNC_002078","XLOC_020612","lncRNA","Zm00001d035434_T001","Zm00001d035434",null,0.995535131593,1.38693501128e-11]
["LNC_002078","XLOC_020612","lncRNA","Zm00001d017768_T009","Zm00001d017768",null,0.995221179286,1.94710914059E-11]
["LNC_000908","XLOC_009337","lncRNA","Zm00001d028809_T001","Zm00001d028809",null,0.954334042817,1.44833435645e-06]
["LNC_000908","XLOC_009337","lncRNA","Zm00001d012710_T002","Zm00001d012710","sp|Q9HB71|CYBP_HUMAN Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2//5.07286e-08",0.951619053436,1.92431816659e-06]
["LNC_002060","XLOC_020357","lncRNA","GRMZM5G825253_T01","GRMZM5G825253",null,0.979644423474,2.65996766835e-08]
["LNC_002060","XLOC_020357","lncRNA","Zm00001d028471_T002","Zm00001d028471","sp|Q9SLZ0|PCKA_MAIZE Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1//0",-0.95296173494,1.6755267315e-06]
["LNC_002060","XLOC_020357","lncRNA","Zm00001d044814_T012","Zm00001d044814","sp|Q9FPR3|EDR1_ARATH Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1//2.52088e-35",0.975498097754,6.67469290949e-08]
["LNC_002060","XLOC_020357","lncRNA","Zm00001d029249_T001","Zm00001d029249",null,-0.950895960166,2.0699407874E-6]
["LNC_003247","XLOC_032160","lncRNA","Zm00001d027769_T002","Zm00001d027769","sp|P80461|GSHRP_TOBAC Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1//7.61026e-15",0.952479889934,1.76167959109E-6]
["LNC_003247","XLOC_032160","lncRNA","Zm00001d016411_T001","Zm00001d016411","sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2//0",0.971027817889,1.53133200342e-07]
["LNC_003247","XLOC_032160","lncRNA","Zm00001d007092_T003","Zm00001d007092","sp|A2BW76|EFTS_PROM5 Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1//2.04558e-73",0.983153560262,1.03886255154E-8]
["LNC_003242","XLOC_032140","lncRNA","Zm00001d025152_T001","Zm00001d025152","sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1//2.94842e-14",0.984819307387,6.18996898183e-09]
["LNC_003242","XLOC_032140","lncRNA","Zm00001d035737_T001","Zm00001d035737","sp|Q944I4|GLYK_ARATH D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=GLYK PE=1 SV=2//4.82871e-179",0.952156846374,1.82138009519E-6]
["LNC_003242","XLOC_032140","lncRNA","Zm00001d038113_T001","Zm00001d038113","sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana GN=CLSY3 PE=1 SV=1//0",0.956259825586,1.17145761713e-06]
["LNC_003242","XLOC_032140","lncRNA","Zm00001d051532_T001","Zm00001d051532","sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1//1.09583e-172",0.972159826463,1.25704650022e-07]
["LNC_004594","XLOC_046268","lncRNA","Zm00001d027876_T001","Zm00001d027876","sp|Q8RUF8|NILP3_ARATH Omega-amidase,chloroplastic OS=Arabidopsis thaliana GN=NLP3 PE=1 SV=1//2.74353e-06",0.96465862239,4.09179095939e-07]
["LNC_004594","XLOC_046268","lncRNA","Zm00001d035750_T001","Zm00001d035750","sp|P64956|Y2253_MYCBO Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2253c PE=3 SV=1//1.99669e-09",0.962973396682,5.15025353698e-07]
["LNC_004594","XLOC_046268","lncRNA","Zm00001d015463_T001","Zm00001d015463","sp|B6U8R7|CSPL9_MAIZE CASP-like protein 2C4 OS=Zea mays PE=2 SV=1//2.85796e-75",0.960637313605,6.96573683401e-07]
["LNC_004594","XLOC_046268","lncRNA","Zm00001d008439_T001","Zm00001d008439","sp|Q9C658|DCP5_ARATH Protein decapping 5 OS=Arabidopsis thaliana GN=DCP5 PE=1 SV=1//3.8981e-49",0.960680617455,6.92801275015e-07]
["LNC_004592","XLOC_046251","lncRNA","Zm00001d032536_T001","Zm00001d032536","sp|O64823|MCU2_ARATH Calcium uniporter protein 2, mitochondrial OS=Arabidopsis thaliana GN=At2g23790 PE=2 SV=1//3.43754e-41",0.953053050469,1.65958337672E-6]
["LNC_004592","XLOC_046251","lncRNA","Zm00001d021761_T001","Zm00001d021761","sp|Q8GWP0|MYB39_ARATH Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1//3.04296e-66",0.960175302775,7.37846972854e-07]
["LNC_004592","XLOC_046251","lncRNA","Zm00001d043249_T001","Zm00001d043249","sp|Q9LSQ5|FQR1_ARATH NAD(P)H dehydrogenase (quinone) FQR1 OS=Arabidopsis thaliana GN=FQR1 PE=1 SV=1//2.32101e-102",0.962570331592,5.43304376599e-07]
["LNC_003483","XLOC_035078","lncRNA","Zm00001d031860_T005","Zm00001d031860","sp|Q7XTG7|HCAR_ORYSJ 7-hydroxymethyl chlorophyll a reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=HCAR PE=3 SV=2//2.80091e-83",0.955368343761,1.29384647529e-06]
["LNC_004599","XLOC_046305","lncRNA","Zm00001d002384_T003","Zm00001d002384","sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1//5.42753e-74",0.950061777815,2.2486497282e-06]
["LNC_004599","XLOC_046305","lncRNA","Zm00001d051906_T003","Zm00001d051906","sp|A4IGU3|MT21A_XENTR Protein N-lysine methyltransferase METTL21A OS=Xenopus tropicalis GN=mettl21a PE=2 SV=1//2.46511e-13",0.954676505312,1.39564574564e-06]
["LNC_004599","XLOC_046305","lncRNA","Zm00001d016836_T004","Zm00001d016836","sp|Q6YVX9|C3H16_ORYSJ Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=Os02g0557500 PE=2 SV=2//2.85849e-07",0.954650326322,1.39961891144e-06]
["LNC_005629","XLOC_056264","lncRNA","Zm00001d038191_T001","Zm00001d038191","sp|Q9SNB4|PCL1_ARATH Transcription factor LUX OS=Arabidopsis thaliana GN=LUX PE=1 SV=1//1.49457e-34",0.967289650838,2.79158807182e-07]
["LNC_005629","XLOC_056264","lncRNA","Zm00001d017965_T001","Zm00001d017965","sp|Q8L612|MACP1_ARATH MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana GN=At1g14780 PE=2 SV=1//8.57873e-165",0.972041486836,1.2837351604e-07]
["LNC_005629","XLOC_056264","lncRNA","Zm00001d006612_T001","Zm00001d006612",null,0.97791923738,3.98355455289e-08]
["LNC_005622","XLOC_056183","lncRNA","Zm00001d003986_T001","Zm00001d003986","sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1//1.34878e-10",0.959230653027,8.28282077592e-07]
["LNC_005622","XLOC_056183","lncRNA","Zm00001d031873_T001","Zm00001d031873","sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic OS=Arabidopsis thaliana GN=RNE PE=1 SV=1//2.21591e-27",0.975051126758,7.3006303003e-08]
["LNC_005626","XLOC_056213","lncRNA","Zm00001d046916_T001","Zm00001d046916","sp|B6SZA7|CSPLA_MAIZE CASP-like protein 2C3 OS=Zea mays PE=2 SV=1//7.54492e-59",0.953739117332,1.54360900861e-06]
["LNC_001418","XLOC_014262","lncRNA","Zm00001d040570_T001","Zm00001d040570",null,0.95600951258,1.2048518363e-06]
["LNC_001418","XLOC_014262","lncRNA","Zm00001d005996_T001","Zm00001d005996","sp|Q00327|PSAG_HORVU Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1//1.4624e-55",0.954129058711,1.48061883154e-06]
["LNC_000474","XLOC_005237","lncRNA","Zm00001d011631_T001","Zm00001d011631","sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1//8.47833e-53",0.964978769399,3.9119018691e-07]
["LNC_001363","XLOC_013587","lncRNA","Zm00001d046538_T001","Zm00001d046538","sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2//4.80706e-10",-0.952048599707,1.84173973634e-06]
["LNC_001363","XLOC_013587","lncRNA","Zm00001d053178_T001","Zm00001d053178",null,-0.952853712437,1.69454370997E-6]
["LNC_001316","XLOC_013058","lncRNA","Zm00001d038675_T583","Zm00001d038675","sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana GN=GWD1 PE=1 SV=2//4.74918e-16",0.96578164427,3.48831356245e-07]
["LNC_004463","XLOC_044657","lncRNA","Zm00001d014625_T001","Zm00001d014625","sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1//8.20697e-25",-0.953307713485,1.61575520471e-06]
["LNC_000970","XLOC_009847","lncRNA","Zm00001d049910_T004","Zm00001d049910","sp|Q9LYT3|TT12_ARATH Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1//8.48945e-92",0.967220440974,2.82091656256e-07]
["LNC_004668","XLOC_046837","lncRNA","Zm00001d010602_T001","Zm00001d010602","sp|Q9FGH9|E70B1_ARATH Exocyst complex component EXO70B1 OS=Arabidopsis thaliana GN=EXO70B1 PE=1 SV=1//2.65056e-177",0.960288598073,7.27550673485e-07]
["LNC_004668","XLOC_046837","lncRNA","Zm00001d036608_T007","Zm00001d036608","sp|Q653V7|AGLU_ORYSJ Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa subsp. japonica GN=Os06g0675700 PE=1 SV=1//0",0.970977193603,1.54462585389e-07]
["LNC_004668","XLOC_046837","lncRNA","Zm00001d026298_T001","Zm00001d026298",null,0.950892945565,2.07056565449e-06]
["LNC_004669","XLOC_046843","lncRNA","Zm00001d011212_T001","Zm00001d011212","sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana GN=BHLH41 PE=3 SV=1//1.40546e-16",0.96507723323,3.85785932977e-07]
["LNC_004667","XLOC_046829","lncRNA","Zm00001d037643_T001","Zm00001d037643","sp|Q43007|PLDA1_ORYSJ Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2//0",0.969750242921,1.89599640876e-07]
["LNC_006192","XLOC_061692","lncRNA","Zm00001d000164_T001","Zm00001d000164","sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1//0",0.956865239652,1.09372098711e-06]
["LNC_006192","XLOC_061692","lncRNA","Zm00001d007531_T001","Zm00001d007531","sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1//0",0.951403374105,1.96687434117e-06]
["LNC_006196","XLOC_061702","lncRNA","Zm00001d007113_T005","Zm00001d007113","sp|Q40082|XYLA_HORVU Xylose isomerase OS=Hordeum vulgare GN=XYLA PE=1 SV=1//0",0.962836725447,5.2447980492e-07]
["LNC_006195","XLOC_061701","lncRNA","Zm00001d028935_T001","Zm00001d028935","sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1//0",0.966086814175,3.33723330082E-7]
["LNC_005880","XLOC_058688","lncRNA","Zm00001d039276_T001","Zm00001d039276","sp|Q7XXL2|4CLL9_ORYSJ 4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2//5.12571e-16",0.96096268102,6.6862467607e-07]
["LNC_002215","XLOC_021988","lncRNA","Zm00001d049821_T001","Zm00001d049821","sp|P0AFR6|YCIO_SHIFL Uncharacterized protein YciO OS=Shigella flexneri GN=yciO PE=3 SV=1//1.06192e-12",0.978038390667,3.87800360713e-08]
["LNC_002215","XLOC_021988","lncRNA","Zm00001d034515_T001","Zm00001d034515",null,0.960650055988,6.95461942257e-07]
["LNC_002215","XLOC_021988","lncRNA","Zm00001d044936_T001","Zm00001d044936","sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum GN=FT1 PE=2 SV=1//7.70837e-156",-0.961415748019,6.31198214447e-07]
["LNC_002215","XLOC_021988","lncRNA","Zm00001d002128_T001","Zm00001d002128","sp|Q7X7H9|SK3_ORYSJ Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=SK3 PE=1 SV=2//1.89185e-84",-0.953270515443,1.62209914824E-6]
["LNC_002215","XLOC_021988","lncRNA","Zm00001d006923_T002","Zm00001d006923","sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2 OS=Arabidopsis thaliana GN=RPS9C PE=2 SV=1//1.48989e-115",0.97465091498,7.89995526773e-08]
["LNC_002215","XLOC_021988","lncRNA","Zm00001d014458_T001","Zm00001d014458","sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2//0",0.953421182374,1.59652516429E-6]
["LNC_003121","XLOC_031100","lncRNA","Zm00001d036293_T001","Zm00001d036293","sp|Q9XGD6|CAMT1_MAIZE Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=CCOAOMT1 PE=2 SV=1//7.18207e-166",0.964647718846,4.09803137646e-07]
["LNC_003121","XLOC_031100","lncRNA","Zm00001d044175_T003","Zm00001d044175","sp|Q0JL46|NCASE_ORYSJ Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1//0",0.953921020473,1.51396560932e-06]
["LNC_003062","XLOC_030444","lncRNA","Zm00001d018795_T099","Zm00001d018795","sp|F4IIU4|AIR9_ARATH 187-kDa microtubule-associated protein AIR9 OS=Arabidopsis thaliana GN=AIR9 PE=1 SV=1//4.31493e-07",0.976971777839,4.90693998767e-08]
["LNC_003062","XLOC_030444","lncRNA","Zm00001d050612_T008","Zm00001d050612","sp|Q9SL02|RAD50_ARATH DNA repair protein RAD50 OS=Arabidopsis thaliana GN=RAD50 PE=1 SV=2//3.98469e-13",0.977067824432,4.80623629784e-08]
["LNC_005959","XLOC_059578","lncRNA","Zm00001d028988_T001","Zm00001d028988","sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=2 SV=1//0",0.957828358324,9.78544892893e-07]
["LNC_003630","XLOC_036375","lncRNA","Zm00001d010523_T005","Zm00001d010523","sp|Q9FQ11|SPP1_MAIZE Sucrose-phosphatase 1 OS=Zea mays GN=SPP1 PE=1 SV=1//1.14416e-18",0.957102368743,1.06441417635E-6]
["LNC_001634","XLOC_015822","lncRNA","Zm00001d031636_T001","Zm00001d031636","sp|Q9C7F7|LTPG1_ARATH Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LTPG1 PE=1 SV=1//1.60263e-24",0.965151316164,3.81759115431e-07]
["LNC_001634","XLOC_015822","lncRNA","Zm00001d032385_T002","Zm00001d032385","sp|P55238|GLGS_HORVU Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1//0",0.969164468542,2.08476094166E-7]
["LNC_001634","XLOC_015822","lncRNA","Zm00001d023431_T001","Zm00001d023431","sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1//0",0.989899885705,8.13874079242E-10]
["LNC_001634","XLOC_015822","lncRNA","Zm00001d034076_T003","Zm00001d034076","sp|O65718|CNGC2_ARATH Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1//0",0.95221985191,1.80961212726E-6]
["LNC_001634","XLOC_015822","lncRNA","Zm00001d023559_T001","Zm00001d023559","sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2//0",0.956065713889,1.19728906078e-06]
["LNC_001635","XLOC_015848","lncRNA","Zm00001d024158_T007","Zm00001d024158","sp|Q38942|RAE1_ARATH Protein RAE1 OS=Arabidopsis thaliana GN=RAE1 PE=1 SV=2//1.42039e-12",0.970807078564,1.5899722916e-07]
["LNC_001633","XLOC_015806","lncRNA","Zm00001d025957_T001","Zm00001d025957","sp|Q9LQZ7|BBX21_ARATH B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1//1.18834e-37",0.959208897133,8.30463845913e-07]
["LNC_002502","XLOC_024901","lncRNA","Zm00001d003667_T001","Zm00001d003667","sp|Q7XQQ2|TRXM3_ORYSJ Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0430800 PE=2 SV=4//6.39979e-62",0.950521017629,2.14881500193E-6]
["LNC_002505","XLOC_024961","lncRNA","Zm00001d028915_T010","Zm00001d028915","sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2 SV=1//7.47615e-08",0.950759674118,2.09834006215e-06]
["LNC_000163","XLOC_001857","lncRNA","Zm00001d021497_T001","Zm00001d021497","sp|P46251|ADF1_MAIZE Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1//1.69899e-84",0.999709576644,0]
["LNC_004919","XLOC_049400","lncRNA","Zm00001d021962_T001","Zm00001d021962","sp|F4IFC5|SYTM2_ARATH Threonine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EMB2761 PE=2 SV=1//0",0.962293366378,5.63441370227e-07]
["LNC_004914","XLOC_049378","lncRNA","Zm00001d045706_T002","Zm00001d045706","sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2//0",0.951864004643,1.87687552744E-6]
["LNC_004915","XLOC_049385","lncRNA","Zm00001d012922_T003","Zm00001d012922","sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2//0",0.957111378846,1.0633130445e-06]
["LNC_004916","XLOC_049400","lncRNA","Zm00001d039261_T001","Zm00001d039261","sp|Q6PAC3|DCA13_MOUSE DDB1- and CUL4-associated factor 13 OS=Mus musculus GN=Dcaf13 PE=2 SV=2//1.08469e-12",0.952871270767,1.69144103013e-06]
["LNC_004916","XLOC_049400","lncRNA","Zm00001d006400_T001","Zm00001d006400",null,0.971685219279,1.36681716834E-7]
["LNC_000697","XLOC_007230","lncRNA","Zm00001d007898_T001","Zm00001d007898","sp|Q55A45|RSMB_DICDI Small nuclear ribonucleoprotein-associated protein B OS=Dictyostelium discoideum GN=snrpb PE=3 SV=1//1.52134e-20",-0.951201151713,2.00745009901e-06]
["LNC_000697","XLOC_007230","lncRNA","Zm00001d017553_T001","Zm00001d017553",null,-0.966240228669,3.26327440586e-07]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d009146_T003","Zm00001d009146","sp|A6XMY9|METK1_TRIMO S-adenosylmethionine synthase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1//0",0.971527247139,1.40499931245E-7]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d048007_T004","Zm00001d048007","sp|O81004|Y2287_ARATH GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2//3.21522e-53",-0.983380890008,9.7100583814e-09]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d009645_T001","Zm00001d009645",null,-0.980512043939,2.14251357205e-08]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d002243_T004","Zm00001d002243","sp|Q94AM9|CID4_ARATH Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana GN=CID4 PE=2 SV=1//1.74143e-10",0.954660115711,1.39813213362e-06]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d051321_T011","Zm00001d051321","sp|Q6H6R9|FTSH7_ORYSJ ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1//7.44312e-175",-0.979157014405,2.99159898075e-08]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d030790_T002","Zm00001d030790","sp|Q8GWT1|GAUTE_ARATH Probable galacturonosyltransferase 14 OS=Arabidopsis thaliana GN=GAUT14 PE=2 SV=1//6.04313e-42",0.967640002292,2.64682126438e-07]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d038131_T002","Zm00001d038131","sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2//1.52468e-99",0.988261468951,1.72109038132e-09]
["LNC_001740","XLOC_017211","lncRNA","Zm00001d011887_T001","Zm00001d011887",null,-0.974554180097,8.05053487561E-8]
["LNC_002448","XLOC_024401","lncRNA","Zm00001d001914_T001","Zm00001d001914","sp|Q7XR80|ARP8_ORYSJ Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1//0",0.967090675553,2.87656656273e-07]
["LNC_002666","XLOC_026245","lncRNA","Zm00001d031254_T003","Zm00001d031254","sp|Q6Z234|RIBA1_ORYSJ Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBA1 PE=2 SV=1//3.06102e-26",0.973895718781,9.13734150565E-8]
["LNC_003807","XLOC_038625","lncRNA","Zm00001d017692_T002","Zm00001d017692","sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2 SV=2//5.97488e-07",0.95412364243,1.48147955881e-06]
["LNC_003807","XLOC_038625","lncRNA","Zm00001d009920_T001","Zm00001d009920",null,0.976806081032,5.08461848181e-08]
["LNC_001247","XLOC_012349","lncRNA","Zm00001d032815_T024","Zm00001d032815","sp|P38094|FLUG_EMENI Protein fluG OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fluG PE=1 SV=1//1.22096e-11",0.958460738061,9.08316549975e-07]
["LNC_001247","XLOC_012349","lncRNA","Zm00001d029792_T001","Zm00001d029792",null,0.958460738509,9.08316501569e-07]
["LNC_001244","XLOC_012329","lncRNA","zma-mir164d","zma-MIR164d",null,0.961355526481,6.36074626303e-07]
["LNC_002998","XLOC_029687","lncRNA","Zm00001d038027_T002","Zm00001d038027",null,0.978278792007,3.67183146111e-08]
["LNC_002996","XLOC_029641","lncRNA","Zm00001d017979_T002","Zm00001d017979","sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2//0",-0.967812459141,2.57779022374e-07]
["LNC_002997","XLOC_029660","lncRNA","Zm00001d025446_T006","Zm00001d025446","sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1//0",0.952934332329,1.68033475356e-06]
["LNC_002994","XLOC_029618","lncRNA","Zm00001d027856_T001","Zm00001d027856","sp|Q9CA63|FBK29_ARATH F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana GN=At1g74510 PE=2 SV=1//7.019e-151",0.960503782844,7.08309062292E-7]
["LNC_002994","XLOC_029618","lncRNA","Zm00001d023646_T001","Zm00001d023646","sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2//7.45442e-42",0.964845792561,3.98584073302e-07]
["LNC_002994","XLOC_029618","lncRNA","Zm00001d010579_T003","Zm00001d010579","sp|Q8W4I7|CDPKD_ARATH Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2//0",0.973936879547,9.06615851282e-08]
["LNC_002994","XLOC_029618","lncRNA","Zm00001d007076_T001","Zm00001d007076",null,0.967752004061,2.60182411393E-7]
["LNC_002994","XLOC_029618","lncRNA","Zm00001d012752_T008","Zm00001d012752","sp|F4HPR5|DRP5A_ARATH Dynamin-related protein 5A OS=Arabidopsis thaliana GN=DRP5A PE=2 SV=1//1.84016e-65",0.950924095156,2.06411616843e-06]
["LNC_002994","XLOC_029618","lncRNA","Zm00001d044729_T001","Zm00001d044729","sp|Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1//2.71818e-27",0.970293246658,1.73341111687e-07]
["LNC_001248","XLOC_012353","lncRNA","Zm00001d034196_T002","Zm00001d034196","sp|Q75KA9|CCS1_ORYSJ Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japonica GN=CCS1 PE=2 SV=1//0",0.980820206808,1.97941307789e-08]
["LNC_001248","XLOC_012353","lncRNA","Zm00001d034143_T001","Zm00001d034143","sp|O64815|HLS1L_ARATH Probable N-acetyltransferase HLS1-like OS=Arabidopsis thaliana GN=At2g23060 PE=2 SV=1//3.42604e-146",0.972708398612,1.13903751542e-07]
["LNC_000345","XLOC_003591","lncRNA","Zm00001d047830_T002","Zm00001d047830","sp|Q9AXH9|KAO1_HORVU Ent-kaurenoic acid oxidase 1 OS=Hordeum vulgare GN=KAO1 PE=1 SV=1//4.30028e-27",0.982522339387,1.24730896722e-08]
["LNC_000340","XLOC_003534","lncRNA","Zm00001d011093_T001","Zm00001d011093",null,0.976774718472,5.11881843579e-08]
["LNC_000340","XLOC_003534","lncRNA","Zm00001d042697_T002","Zm00001d042697","sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea GN=PSBS PE=1 SV=1//3.79799e-89",0.959831181382,7.69832519731e-07]
["LNC_000340","XLOC_003534","lncRNA","Zm00001d029120_T035","Zm00001d029120","sp|Q7ZZ25|ATD1A_DANRE ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2//2.90014e-65",0.95852981295,9.00894880473e-07]
["LNC_000340","XLOC_003534","lncRNA","Zm00001d002317_T009","Zm00001d002317","sp|Q9XIR4|APO1_ARATH APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1//1.54436e-151",0.953883845964,1.51998662079e-06]
["LNC_000340","XLOC_003534","lncRNA","Zm00001d018112_T003","Zm00001d018112","sp|Q9LX90|PABN3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PABN3 PE=1 SV=1//5.48783e-07",-0.955653586341,1.25363256633e-06]
["LNC_002440","XLOC_024348","lncRNA","Zm00001d006520_T001","Zm00001d006520","sp|Q195N6|PDRP1_MAIZE Pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Zea mays GN=PDRP1 PE=1 SV=1//0",0.954530797054,1.41787400065e-06]
["LNC_002440","XLOC_024348","lncRNA","Zm00001d022464_T001","Zm00001d022464",null,0.965385552374,3.69246474285e-07]
["LNC_002440","XLOC_024348","lncRNA","Zm00001d013130_T002","Zm00001d013130","sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1//5.21465e-25",0.975334007695,6.89930492737e-08]
["LNC_000348","XLOC_003688","lncRNA","Zm00001d035731_T004","Zm00001d035731",null,0.957410456116,1.0272726374e-06]
["LNC_000348","XLOC_003688","lncRNA","Zm00001d009248_T015","Zm00001d009248","sp|Q5ZAJ0|RBOHB_ORYSJ Respiratory burst oxidase homolog protein B OS=Oryza sativa subsp. japonica GN=RBOHB PE=1 SV=1//0",0.969140738341,2.09271142859e-07]
["LNC_001460","XLOC_014581","lncRNA","Zm00001d015999_T001","Zm00001d015999","sp|Q66GI4|PRRP1_ARATH Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PRORP1 PE=1 SV=1//6.67684e-131",0.953990590195,1.50274853006e-06]
["LNC_001460","XLOC_014581","lncRNA","Zm00001d039040_T001","Zm00001d039040","sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1//4.52306e-167",0.971438296476,1.42686952476e-07]
["LNC_002861","XLOC_028510","lncRNA","Zm00001d036230_T001","Zm00001d036230","sp|P51281|YCF45_PORPU Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1//8.19156e-137",0.953354693089,1.60777121239e-06]
["LNC_002861","XLOC_028510","lncRNA","Zm00001d045604_T003","Zm00001d045604","sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EDD1 PE=1 SV=1//9.25327e-07",0.963319558624,4.91684059023e-07]
["LNC_002861","XLOC_028510","lncRNA","Zm00001d048116_T001","Zm00001d048116",null,0.993341807403,1.0190781552E-10]
["LNC_002861","XLOC_028510","lncRNA","Zm00001d037775_T004","Zm00001d037775","sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=1 SV=1//2.99974e-20",0.956253743085,1.17226027241E-6]
["LNC_005320","XLOC_053365","lncRNA","Zm00001d012909_T001","Zm00001d012909","sp|O31581|YFHM_BACSU AB hydrolase superfamily protein YfhM OS=Bacillus subtilis (strain 168) GN=yfhM PE=3 SV=1//2.83914e-13",0.964052852412,4.45014072703e-07]
["LNC_005320","XLOC_053365","lncRNA","Zm00001d051956_T001","Zm00001d051956","sp|Q84TE6|NAC22_ARATH NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2//2.11695e-52",0.951289308638,1.98968066734e-06]
["LNC_005320","XLOC_053365","lncRNA","Zm00001d035007_T001","Zm00001d035007","sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1//0",0.980528935904,2.13330459964e-08]
["LNC_005324","XLOC_053484","lncRNA","Zm00001d025278_T058","Zm00001d025278","sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2 SV=1//1.05142e-28",0.965847720799,3.45514876487e-07]
["LNC_000205","XLOC_002079","lncRNA","Zm00001d034944_T001","Zm00001d034944","sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1//8.58548e-164",0.973434749589,9.96537607989e-08]
["LNC_000205","XLOC_002079","lncRNA","Zm00001d024832_T006","Zm00001d024832","sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana GN=NHX2 PE=2 SV=2//7.4168e-07",0.999397824817,6.66133814775e-16]
["LNC_000207","XLOC_002089","lncRNA","Zm00001d039086_T001","Zm00001d039086","sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1//4.08352e-84",0.969236532064,2.06076423925E-7]
["LNC_001330","XLOC_013154","lncRNA","Zm00001d037096_T006","Zm00001d037096","sp|Q9SHI7|UBC34_ARATH Ubiquitin-conjugating enzyme E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1//1.33848e-21",0.992750061679,1.55835788718e-10]
["LNC_002442","XLOC_024359","lncRNA","Zm00001d004125_T046","Zm00001d004125","sp|B9FK36|ACC2_ORYSJ Acetyl-CoA carboxylase 2 OS=Oryza sativa subsp. japonica GN=ACC2 PE=3 SV=2//0",0.963105762365,5.05998373868e-07]
["LNC_004298","XLOC_043461","lncRNA","Zm00001d028630_T005","Zm00001d028630","sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1//0",0.965228342147,3.77607840552e-07]
["LNC_001948","XLOC_019093","lncRNA","Zm00001d018931_T001","Zm00001d018931","sp|Q9LHF1|LRX4_ARATH Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana GN=LRX4 PE=2 SV=1//1.82029e-77",0.969585421565,1.94767444173E-7]
["LNC_001948","XLOC_019093","lncRNA","Zm00001d050153_T002","Zm00001d050153","sp|Q56X72|RTNLS_ARATH Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2//2.02495e-14",0.952536501477,1.75137924052E-6]
["LNC_001948","XLOC_019093","lncRNA","Zm00001d033457_T002","Zm00001d033457","sp|Q43695|TBB3_MAIZE Tubulin beta-3 chain OS=Zea mays GN=TUBB3 PE=2 SV=1//0",0.98870240235,1.42228273603E-9]
["LNC_001948","XLOC_019093","lncRNA","Zm00001d018462_T011","Zm00001d018462","sp|Q4VCM1|LCAT2_ARATH Phospholipid--sterol O-acyltransferase OS=Arabidopsis thaliana GN=PSAT PE=2 SV=2//3.96507e-16",0.97845768436,3.52415785443E-8]
["LNC_005435","XLOC_054684","lncRNA","Zm00001d049938_T016","Zm00001d049938","sp|O23826|K125_TOBAC 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1//0",0.973783332547,9.33397044101E-8]
["LNC_005438","XLOC_054705","lncRNA","Zm00001d053735_T001","Zm00001d053735","sp|Q551H4|FRAY2_DICDI Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1//8.04233e-92",0.960651835508,6.95306795695e-07]
["LNC_004692","XLOC_047050","lncRNA","Zm00001d036416_T001","Zm00001d036416","sp|Q9ZUZ2|CAMK3_ARATH CDPK-related kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=1 SV=1//0",-0.958061479374,9.52171612644E-7]
["LNC_004692","XLOC_047050","lncRNA","Zm00001d044717_T001","Zm00001d044717","sp|Q653P0|KOR1_ORYSJ Potassium channel KOR1 OS=Oryza sativa subsp. japonica GN=Os06g0250600 PE=2 SV=1//0",0.957681692325,9.95432421824e-07]
["LNC_004691","XLOC_047050","lncRNA","Zm00001d006833_T001","Zm00001d006833",null,0.981161797735,1.81035257896e-08]
["LNC_004691","XLOC_047050","lncRNA","Zm00001d016144_T005","Zm00001d016144","sp|Q9C8L2|FAP3_ARATH Fatty-acid-binding protein 3 OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1//2.52009e-42",0.95479918892,1.37714524273E-6]
["LNC_004691","XLOC_047050","lncRNA","Zm00001d053652_T002","Zm00001d053652","sp|Q944B0|FK161_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1//4.41016e-65",0.958338219427,9.21599811798e-07]
["LNC_004691","XLOC_047050","lncRNA","Zm00001d048473_T002","Zm00001d048473","sp|Q42551|SCE1_ARATH SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1//9.92781e-21",0.976754437348,5.14103182248E-8]
["LNC_004699","XLOC_047075","lncRNA","Zm00001d016358_T001","Zm00001d016358","sp|Q5Z627|EF1G3_ORYSJ Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1//0",-0.960070163594,7.47505284216e-07]
["LNC_005506","XLOC_055095","lncRNA","Zm00001d021395_T002","Zm00001d021395",null,0.988625774891,1.47098688785e-09]
["LNC_000975","XLOC_009886","lncRNA","Zm00001d021891_T004","Zm00001d021891","sp|P33627|TBA6_MAIZE Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1//0",0.981428716685,1.6864367236e-08]
["LNC_002048","XLOC_020158","lncRNA","Zm00001d010713_T005","Zm00001d010713","sp|Q9LUI3|TSO1_ARATH CRC domain-containing protein TSO1 OS=Arabidopsis thaliana GN=TSO1 PE=1 SV=1//4.82232e-32",0.96819456937,2.42993676736e-07]
["LNC_000979","XLOC_009942","lncRNA","Zm00001d011634_T001","Zm00001d011634","sp|Q9LHE7|FYPP3_ARATH Phytochrome-associated serine/threonine-protein phosphatase 3 OS=Arabidopsis thaliana GN=FYPP3 PE=1 SV=1//2.83368e-78",0.956660118356,1.11958546256E-6]
["LNC_003270","XLOC_032454","lncRNA","Zm00001d009312_T009","Zm00001d009312","sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa subsp. japonica GN=Os01g0367900 PE=2 SV=2//6.87657e-48",0.955976029775,1.20937547177E-6]
["LNC_003272","XLOC_032480","lncRNA","Zm00001d041179_T006","Zm00001d041179","sp|Q4LDF9|OEP37_PEA Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1//2.89024e-70",0.950618688618,2.12804289301e-06]
["LNC_003272","XLOC_032480","lncRNA","Zm00001d014816_T001","Zm00001d014816","sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1//4.97177e-41",0.985597975123,4.76337902455e-09]
["LNC_003272","XLOC_032480","lncRNA","Zm00001d027518_T001","Zm00001d027518","sp|Q8LSQ2|SR43C_ORYSJ Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0131900 PE=2 SV=1//5.39024e-173",0.961208071156,6.48141220694e-07]
["LNC_003272","XLOC_032480","lncRNA","Zm00001d003632_T003","Zm00001d003632","sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1//0",0.970604827208,1.64525722379e-07]
["LNC_003272","XLOC_032480","lncRNA","Zm00001d035664_T001","Zm00001d035664","sp|Q9ZV24|OP161_ARATH Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana GN=OEP161 PE=1 SV=1//5.81431e-36",0.965453614644,3.65672513158E-7]
["LNC_004581","XLOC_046193","lncRNA","Zm00001d048590_T001","Zm00001d048590","sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2//5.14032e-19",0.952041794159,1.84302576778E-6]
["LNC_003472","XLOC_034922","lncRNA","Zm00001d016255_T001","Zm00001d016255","sp|Q6EUG4|HFC2A_ORYSJ Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica GN=HSFC2A PE=2 SV=1//4.65355e-87",0.958887687945,8.63210715352e-07]
["LNC_003471","XLOC_034908","lncRNA","Zm00001d037492_T003","Zm00001d037492","sp|Q06572|AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2//0",0.963330052184,4.90989863433e-07]
["LNC_003471","XLOC_034908","lncRNA","Zm00001d003039_T002","Zm00001d003039","sp|F4IVU1|ARC2B_ARATH Actin-related protein 2/3 complex subunit 2B OS=Arabidopsis thaliana GN=ARPC2B PE=2 SV=1//1.65783e-12",0.955199195083,1.31817255045e-06]
["LNC_001291","XLOC_012826","lncRNA","Zm00001d033787_T001","Zm00001d033787",null,0.965509442637,3.62761559902e-07]
["LNC_003970","XLOC_040313","lncRNA","Zm00001d029150_T001","Zm00001d029150","sp|B6SZW0|DCVR_MAIZE Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic OS=Zea mays GN=DVR PE=1 SV=1//0",0.952414146569,1.77370170817e-06]
["LNC_003970","XLOC_040313","lncRNA","Zm00001d047345_T001","Zm00001d047345","sp|P51273|YCF36_PORPU Uncharacterized protein ycf36 OS=Porphyra purpurea GN=ycf36 PE=3 SV=1//1.51942e-36",0.976033449225,5.98206406632e-08]
["LNC_000803","XLOC_008198","lncRNA","Zm00001d017807_T001","Zm00001d017807","sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana GN=At4g28100 PE=1 SV=1//1.58544e-14",0.972717361879,1.13718546135E-7]
["LNC_000803","XLOC_008198","lncRNA","Zm00001d031866_T001","Zm00001d031866","sp|P33543|TMKL1_ARATH Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1//0",0.960075307509,7.47030428849e-07]
["LNC_000803","XLOC_008198","lncRNA","Zm00001d004698_T001","Zm00001d004698","sp|Q9FIJ6|ACCR4_ARATH Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1//7.09352e-12",0.980941392178,1.91805500371E-8]
["LNC_000803","XLOC_008198","lncRNA","Zm00001d049678_T001","Zm00001d049678","sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2//3.57518e-84",0.9630882371,5.07186271204E-7]
["LNC_000807","XLOC_008312","lncRNA","Zm00001d034940_T053","Zm00001d034940","sp|Q8GU84|AB48G_ORYSJ ABC transporter G family member 48 OS=Oryza sativa subsp. japonica GN=ABCG48 PE=3 SV=1//5.1696e-66",0.967753304783,2.60130514462e-07]
["LNC_000807","XLOC_008312","lncRNA","Zm00001d027392_T029","Zm00001d027392","sp|Q9SFU6|CALS9_ARATH Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=2//0",0.961312076088,6.39611556608e-07]
["LNC_000805","XLOC_008300","lncRNA","Zm00001d015963_T001","Zm00001d015963","sp|Q8GXM8|MATE7_ARATH MATE efflux family protein 7 OS=Arabidopsis thaliana GN=DTXL3 PE=2 SV=1//1.93287e-49",0.962399881913,5.55628083543e-07]
["LNC_001732","XLOC_017057","lncRNA","Zm00001d052840_T018","Zm00001d052840","sp|F4JVA6|SFH6_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1//3.1662e-149",0.967079519417,2.88139133886e-07]
["LNC_003811","XLOC_038707","lncRNA","Zm00001d003841_T002","Zm00001d003841","sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1//2.39177e-100",0.967170468218,2.84224507263E-7]
["LNC_002192","XLOC_021891","lncRNA","Zm00001d033657_T020","Zm00001d033657","sp|Q8LPU4|HAT1_MAIZE Histone acetyltransferase type B catalytic subunit OS=Zea mays GN=HAT1 PE=1 SV=2//0",0.963545375545,4.76916406811E-7]
["LNC_002192","XLOC_021891","lncRNA","Zm00001d032984_T001","Zm00001d032984","sp|Q9LDV4|ALAT2_ARATH Alanine aminotransferase 2, mitochondrial OS=Arabidopsis thaliana GN=ALAAT2 PE=2 SV=1//2.09724e-94",0.956872467431,1.09281834337E-6]
["LNC_002190","XLOC_021878","lncRNA","Zm00001d042867_T001","Zm00001d042867","sp|P81713|IBB3_WHEAT Bowman-Birk type trypsin inhibitor OS=Triticum aestivum PE=1 SV=1//1.04675e-12",0.961373985917,6.345767114e-07]
["LNC_002190","XLOC_021878","lncRNA","Zm00001d015385_T001","Zm00001d015385","sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1//1.35847e-157",0.961322224909,6.38784031448e-07]
["LNC_002190","XLOC_021878","lncRNA","Zm00001d013741_T008","Zm00001d013741","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//3.51416e-154",0.97291727572,1.09649698654E-7]
["LNC_003582","XLOC_035988","lncRNA","Zm00001d020955_T001","Zm00001d020955","sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2//1.53112e-151",0.990110982165,7.32562899231e-10]
["LNC_006181","XLOC_061616","lncRNA","Zm00001d007572_T001","Zm00001d007572","sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1//2.1118e-107",0.966292894598,3.23818774461e-07]
["LNC_006180","XLOC_061615","lncRNA","Zm00001d024637_T001","Zm00001d024637","sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=2 SV=1//0",0.983244379533,1.01131432118E-8]
["LNC_006189","XLOC_061667","lncRNA","GRMZM5G887290_T01","GRMZM5G887290","sp|P08977|RT13_MAIZE Ribosomal protein S13, mitochondrial OS=Zea mays GN=RPS13 PE=3 SV=2//7.86297e-79",0.964739694727,4.04562744638E-7]
["LNC_006219","XLOC_061835","lncRNA","Zm00001d002680_T002","Zm00001d002680",null,0.955869164996,1.22390351143e-06]
["LNC_006219","XLOC_061835","lncRNA","Zm00001d044656_T001","Zm00001d044656","sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1//3.04624e-08",0.979373419191,2.84051986377E-8]
["LNC_002227","XLOC_022066","lncRNA","Zm00001d043508_T002","Zm00001d043508","sp|Q8RXE9|SYWM_ARATH Tryptophan--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA4 PE=2 SV=1//6.34289e-57",0.953347270719,1.60903052748e-06]
["LNC_002227","XLOC_022066","lncRNA","Zm00001d048309_T001","Zm00001d048309","sp|Q10R47|ILI3_ORYSJ Transcription factor ILI3 OS=Oryza sativa subsp. japonica GN=ILI3 PE=3 SV=1//3.25459e-28",0.959885908506,7.64673407927e-07]
["LNC_003054","XLOC_030378","lncRNA","Zm00001d027916_T005","Zm00001d027916","sp|Q94A27|SAC2_ARATH Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana GN=SAC2 PE=2 SV=1//4.85785e-21",0.983158961947,1.03720749767e-08]
["LNC_003054","XLOC_030378","lncRNA","Zm00001d026239_T011","Zm00001d026239","sp|A2XX57|COLD1_ORYSI GPCR-type G protein COLD1 OS=Oryza sativa subsp. indica GN=COLD1 PE=3 SV=1//8.76322e-09",0.961241920276,6.45355322515e-07]
["LNC_003054","XLOC_030378","lncRNA","Zm00001d010321_T005","Zm00001d010321","sp|Q42368|PPDK2_MAIZE Pyruvate, phosphate dikinase 2 OS=Zea mays GN=PPDK2 PE=1 SV=2//0",0.992255526718,2.16568984968e-10]
["LNC_003298","XLOC_032822","lncRNA","Zm00001d037984_T003","Zm00001d037984","sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1//1.58374e-23",0.974677621653,7.85878087051e-08]
["LNC_000376","XLOC_003947","lncRNA","Zm00001d034505_T002","Zm00001d034505","sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=1 SV=1//2.4692e-29",-0.956781486532,1.10422376299E-6]
["LNC_003293","XLOC_032728","lncRNA","Zm00001d043019_T001","Zm00001d043019","sp|Q941X2|LAC3_ORYSJ Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1//5.3895e-26",0.951834303486,1.88257815115E-6]
["LNC_000592","XLOC_006412","lncRNA","Zm00001d027487_T017","Zm00001d027487","sp|Q9CSH3|RRP44_MOUSE Exosome complex exonuclease RRP44 OS=Mus musculus GN=Dis3 PE=2 SV=4//3.9335e-10",0.966374990656,3.19938858961e-07]
["LNC_000595","XLOC_006435","lncRNA","Zm00001d043553_T001","Zm00001d043553","sp|B9DFX7|HMA8_ARATH Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana GN=PAA2 PE=2 SV=1//2.13243e-26",0.988097748668,1.8440022842e-09]
["LNC_000596","XLOC_006447","lncRNA","Zm00001d033344_T001","Zm00001d033344","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//0",0.953237835352,1.62768887124e-06]
["LNC_000596","XLOC_006447","lncRNA","Zm00001d021930_T001","Zm00001d021930","sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1//2.10791e-62",-0.969615187984,1.93825952025e-07]
["LNC_000596","XLOC_006447","lncRNA","Zm00001d041864_T005","Zm00001d041864","sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=2 SV=1//3.10472e-07",0.958220719912,9.34483382675E-7]
["LNC_000597","XLOC_006448","lncRNA","Zm00001d007581_T001","Zm00001d007581","sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1//1.21352e-81",0.971215301434,1.4828901107e-07]
["LNC_000597","XLOC_006448","lncRNA","Zm00001d029388_T002","Zm00001d029388","sp|Q7XJE6|MCA1_ARATH Metacaspase-1 OS=Arabidopsis thaliana GN=AMC1 PE=1 SV=1//9.93069e-71",0.95164495176,1.91925763127e-06]
["LNC_000597","XLOC_006448","lncRNA","Zm00001d042210_T001","Zm00001d042210","sp|Q0JG98|PIR7A_ORYSJ Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=3 SV=2//6.73508e-81",-0.964985433419,3.90822539407e-07]
["LNC_000597","XLOC_006448","lncRNA","Zm00001d033717_T001","Zm00001d033717",null,0.966628552754,3.08188218945e-07]
["LNC_000597","XLOC_006448","lncRNA","Zm00001d020827_T001","Zm00001d020827","sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1//4.69754e-179",0.951848321983,1.87988488909e-06]
["LNC_000597","XLOC_006448","lncRNA","Zm00001d020409_T003","Zm00001d020409","sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1//3.41516e-08",0.976126853094,5.86732253893e-08]
["LNC_000598","XLOC_006456","lncRNA","Zm00001d038597_T001","Zm00001d038597","sp|P29835|GL19_ORYSJ 19 kDa globulin OS=Oryza sativa subsp. japonica GN=Os05g0499100 PE=1 SV=2//8.7445e-25",0.984115842115,7.75424102706e-09]
["LNC_000598","XLOC_006456","lncRNA","Zm00001d032049_T006","Zm00001d032049","sp|Q6Z965|OPR7_ORYSJ 12-oxophytodienoate reductase 7 OS=Oryza sativa subsp. japonica GN=OPR7 PE=2 SV=1//1.36951e-59",0.968589960213,2.28412927683e-07]
["LNC_000599","XLOC_006466","lncRNA","Zm00001d042345_T001","Zm00001d042345","sp|Q5JLM1|PIN6_ORYSJ Probable auxin efflux carrier component 6 OS=Oryza sativa subsp. japonica GN=PIN6 PE=2 SV=1//0",0.959957544168,7.57961879039e-07]
["LNC_000599","XLOC_006466","lncRNA","Zm00001d022544_T002","Zm00001d022544","sp|Q93WI0|STR12_ARATH Rhodanese-like/PpiC domain-containing protein 12 OS=Arabidopsis thaliana GN=At5g19370 PE=2 SV=1//3.42391e-06",0.964357913021,4.26668967268e-07]
["LNC_000742","XLOC_007635","lncRNA","Zm00001d027854_T003","Zm00001d027854","sp|Q10R54|SUT1_ORYSJ Sucrose transport protein SUT1 OS=Oryza sativa subsp. japonica GN=SUT1 PE=1 SV=1//5.76601e-24",0.976209940189,5.76673468977e-08]
["LNC_000752","XLOC_007807","lncRNA","Zm00001d036351_T064","Zm00001d036351","sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3//7.53543e-139",0.95804439508,9.5408499412e-07]
["LNC_001793","XLOC_017922","lncRNA","Zm00001d048271_T001","Zm00001d048271","sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1//7.65011e-174",0.951006772602,2.04707513762e-06]
["LNC_001793","XLOC_017922","lncRNA","Zm00001d029968_T001","Zm00001d029968","sp|P93554|NDK1_SACOF Nucleoside diphosphate kinase 1 OS=Saccharum officinarum GN=NDPK1 PE=1 SV=1//3.21201e-101",0.979647117217,2.6582201329e-08]
["LNC_001792","XLOC_017913","lncRNA","Zm00001d002826_T001","Zm00001d002826","sp|O22150|SAU36_ARATH Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1//2.97366e-15",0.966642980145,3.07530093391e-07]
["LNC_002538","XLOC_025256","lncRNA","Zm00001d034705_T001","Zm00001d034705",null,0.961453580672,6.28149958715e-07]
["LNC_002538","XLOC_025256","lncRNA","Zm00001d008549_T002","Zm00001d008549","sp|Q9LQK7|AB7I_ARATH Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1//3.28093e-23",0.980482656226,2.15861033492e-08]
["LNC_002538","XLOC_025256","lncRNA","Zm00001d045747_T004","Zm00001d045747","sp|Q92IH1|TOP1_RICCN DNA topoisomerase 1 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=topA PE=3 SV=1//1.44235e-62",0.952258151886,1.80248811388E-6]
["LNC_002538","XLOC_025256","lncRNA","Zm00001d018498_T002","Zm00001d018498","sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium discoideum GN=DDB_G0284757 PE=3 SV=2//4.10998e-12",0.969454528328,1.98950796726e-07]
["LNC_002538","XLOC_025256","lncRNA","Zm00001d010240_T001","Zm00001d010240","sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=1//8.02383e-21",0.972793136465,1.12162401589E-7]
["LNC_002538","XLOC_025256","lncRNA","Zm00001d040383_T005","Zm00001d040383",null,0.985042525701,5.75021852356e-09]
["LNC_002538","XLOC_025256","lncRNA","Zm00001d032790_T003","Zm00001d032790","sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2//8.12812e-08",0.989318728998,1.07551900719E-9]
["LNC_002532","XLOC_025208","lncRNA","Zm00001d051349_T002","Zm00001d051349","sp|Q9STS3|CDC23_ARATH Anaphase-promoting complex subunit 8 OS=Arabidopsis thaliana GN=APC8 PE=1 SV=1//4.10192e-10",0.968709737228,2.24136219806e-07]
["LNC_003125","XLOC_031131","lncRNA","Zm00001d021490_T005","Zm00001d021490",null,0.962409412721,5.54933185404e-07]
["LNC_004909","XLOC_049319","lncRNA","Zm00001d030109_T001","Zm00001d030109","sp|O82290|SKL2_ARATH Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana GN=SKL2 PE=2 SV=2//1.91317e-104",0.955353755307,1.29593035991E-6]
["LNC_004908","XLOC_049273","lncRNA","Zm00001d037342_T001","Zm00001d037342","sp|Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1//3.71061e-44",0.959097210326,8.41736231383e-07]
["LNC_002568","XLOC_025427","lncRNA","Zm00001d027846_T001","Zm00001d027846","sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2//1.64065e-49",0.992447888918,1.91037408115E-10]
["LNC_002568","XLOC_025427","lncRNA","Zm00001d039987_T002","Zm00001d039987","sp|P08452|Y1174_SYNP6 Uncharacterized lipoprotein syc1174_c OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1174_c PE=3 SV=2//7.10527e-15",0.956725281429,1.11131675662E-6]
["LNC_002568","XLOC_025427","lncRNA","Zm00001d013361_T001","Zm00001d013361","sp|Q9CR14|FANCL_MOUSE E3 ubiquitin-protein ligase FANCL OS=Mus musculus GN=Fancl PE=1 SV=1//9.61942e-56",0.951690300488,1.910421914E-6]
["LNC_002568","XLOC_025427","lncRNA","Zm00001d031514_T001","Zm00001d031514",null,0.962457917883,5.51407333127e-07]
["LNC_002568","XLOC_025427","lncRNA","Zm00001d007921_T001","Zm00001d007921","sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2//8.80677e-96",0.952447185958,1.76765187421E-6]
["LNC_002568","XLOC_025427","lncRNA","Zm00001d010305_T004","Zm00001d010305","sp|Q40153|LE14B_LITER LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1//1.35792e-78",0.969638613859,1.93087557054e-07]
["LNC_004900","XLOC_049207","lncRNA","Zm00001d021871_T003","Zm00001d021871","sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1//0",0.971221011404,1.48143415757e-07]
["LNC_004900","XLOC_049207","lncRNA","Zm00001d047238_T001","Zm00001d047238","sp|Q10K62|HMOX2_ORYSJ Probable inactive heme oxygenase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=HO2 PE=2 SV=1//4.95188e-121",0.963165913606,5.01938013375e-07]
["LNC_004900","XLOC_049207","lncRNA","Zm00001d020008_T001","Zm00001d020008","sp|P49572|TRPC_ARATH Indole-3-glycerol phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g04400 PE=2 SV=2//1.14425e-131",0.990024523592,7.65040697459E-10]
["LNC_004900","XLOC_049207","lncRNA","GRMZM5G830210_T01","GRMZM5G830210","sp|P46618|IF1C_MAIZE Translation initiation factor IF-1, chloroplastic OS=Zea mays GN=infA PE=3 SV=1//2.6926e-60",0.974145702198,8.7117949521E-8]
["LNC_005187","XLOC_052034","lncRNA","Zm00001d037898_T003","Zm00001d037898","sp|Q9LT96|Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1//1.01822e-35",0.954476773742,1.4261864536e-06]
["LNC_002453","XLOC_024470","lncRNA","Zm00001d002396_T016","Zm00001d002396","sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1//0",0.95949645627,8.01991956401e-07]
["LNC_002450","XLOC_024428","lncRNA","Zm00001d022193_T002","Zm00001d022193","sp|Q7XI41|TPP3_ORYSJ Probable trehalose-phosphate phosphatase 3 OS=Oryza sativa subsp. japonica GN=TPP3 PE=2 SV=1//6.53673e-126",0.981165370504,1.80864736521E-8]
["LNC_002450","XLOC_024428","lncRNA","Zm00001d036204_T001","Zm00001d036204","sp|O48649|ARF1_SALBA ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3//4.6161e-27",0.954465053191,1.42799496494E-6]
["LNC_003879","XLOC_039392","lncRNA","Zm00001d045544_T001","Zm00001d045544","sp|P21240|CPNB1_ARATH Chaperonin 60 subunit beta 1, chloroplastic OS=Arabidopsis thaliana GN=CPN60B1 PE=1 SV=3//0",0.969419139089,2.00094027125E-7]
["LNC_003879","XLOC_039392","lncRNA","Zm00001d044327_T003","Zm00001d044327","sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5&apos;-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1//1.10974e-18",0.974896837332,7.52722892905e-08]
["LNC_003874","XLOC_039346","lncRNA","Zm00001d029375_T017","Zm00001d029375","sp|Q8CFQ3|AQR_MOUSE Intron-binding protein aquarius OS=Mus musculus GN=Aqr PE=2 SV=2//0",0.952914311444,1.68385450428e-06]
["LNC_003873","XLOC_039346","lncRNA","Zm00001d045597_T015","Zm00001d045597","sp|F4JQZ3|REN1_ARATH Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana GN=REN1 PE=1 SV=2//9.20689e-08",0.962726414728,5.3221088514e-07]
["LNC_004871","XLOC_048920","lncRNA","Zm00001d040836_T001","Zm00001d040836","sp|Q7G8Y5|GRXC1_ORYSJ Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1//8.76797e-58",0.981546572345,1.63392313013e-08]
["LNC_004877","XLOC_048968","lncRNA","Zm00001d018787_T001","Zm00001d018787","sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2//0",0.967130239624,2.85950777279E-7]
["LNC_004877","XLOC_048968","lncRNA","Zm00001d016411_T001","Zm00001d016411","sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2//0",0.970659351694,1.63020477117E-7]
["LNC_004877","XLOC_048968","lncRNA","Zm00001d017178_T005","Zm00001d017178",null,0.95436322824,1.44378353406E-6]
["LNC_002988","XLOC_029557","lncRNA","Zm00001d030742_T002","Zm00001d030742",null,0.959743878935,7.78119702449E-7]
["LNC_002980","XLOC_029475","lncRNA","Zm00001d037100_T119","Zm00001d037100","sp|Q569Z2|XPO7B_XENLA Exportin-7-B OS=Xenopus laevis GN=xpo7-b PE=2 SV=1//2.85857e-21",0.953319198345,1.61380050079e-06]
["LNC_002980","XLOC_029475","lncRNA","Zm00001d032009_T001","Zm00001d032009",null,0.957656715487,9.98331240565e-07]
["LNC_005058","XLOC_050708","lncRNA","Zm00001d037984_T001","Zm00001d037984","sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1//1.58374e-23",0.951125476916,2.02280374628E-6]
["LNC_005058","XLOC_050708","lncRNA","Zm00001d018247_T001","Zm00001d018247","sp|P93751|ZFP8_ARATH Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1//9.20295e-25",0.978626123027,3.38947845346e-08]
["LNC_005058","XLOC_050708","lncRNA","Zm00001d049379_T021","Zm00001d049379","sp|Q9Y5Q9|TF3C3_HUMAN General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=1//2.58203e-21",-0.957079211636,1.06724837898E-6]
["LNC_005058","XLOC_050708","lncRNA","Zm00001d028373_T001","Zm00001d028373","sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1//2.71919e-17",0.96549915118,3.63296781325e-07]
["LNC_000570","XLOC_006245","lncRNA","Zm00001d020602_T014","Zm00001d020602","sp|Q40863|EMB8_PICGL Embryogenesis-associated protein EMB8 OS=Picea glauca GN=EMB8 PE=2 SV=1//9.95775e-41",0.965059251943,3.86768390426e-07]
["LNC_000576","XLOC_006306","lncRNA","Zm00001d035004_T037","Zm00001d035004","sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1//3.08978e-59",0.961134101499,6.54262438227E-7]
["LNC_000574","XLOC_006279","lncRNA","Zm00001d042345_T001","Zm00001d042345","sp|Q5JLM1|PIN6_ORYSJ Probable auxin efflux carrier component 6 OS=Oryza sativa subsp. japonica GN=PIN6 PE=2 SV=1//0",0.97395545876,9.03417283205e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051908_T001","Zm00001d051908","sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1426 PE=3 SV=1//7.48953e-08",0.978376792318,3.5903351403e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002815_T001","Zm00001d002815","sp|Q7FB12|NDHM_ORYSJ NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhM PE=2 SV=1//2.13959e-92",0.957659882024,9.97963360838e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038163_T011","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.983968288345,8.11914557808e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038274_T002","Zm00001d038274",null,0.952260836622,1.80198957356E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051779_T001","Zm00001d051779","sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1//1.77406e-31",0.97808740251,3.83523941494E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014919_T004","Zm00001d014919","sp|P13443|DHGY_CUCSA Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1//0",0.972287530869,1.22874336927E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049348_T006","Zm00001d049348","sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3//1.5511e-22",-0.962653110104,5.37398305544e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028296_T001","Zm00001d028296","sp|Q9ZUB8|SKI22_ARATH F-box protein SKIP22 OS=Arabidopsis thaliana GN=SKIP22 PE=1 SV=1//1.76116e-08",0.975047627182,7.30570901553e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039745_T001","Zm00001d039745","sp|Q942P9|P2C01_ORYSJ Probable protein phosphatase 2C 1 OS=Oryza sativa subsp. japonica GN=Os01g0164600 PE=2 SV=1//6.79427e-42",0.960469989133,7.11303790535e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043182_T001","Zm00001d043182","sp|Q8S2G0|ISPE_ORYSJ 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPE PE=2 SV=1//2.57315e-71",0.954505974629,1.42168858641e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033704_T001","Zm00001d033704","sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica GN=Os03g0708600 PE=2 SV=1//0",0.964926337921,3.94092384282E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d024676_T001","Zm00001d024676",null,0.961516131621,6.23135766542e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028954_T001","Zm00001d028954","sp|Q10M74|GMK2_ORYSJ Guanylate kinase 2, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=V2 PE=1 SV=1//1.08544e-144",0.951870976027,1.87553900899E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007750_T001","Zm00001d007750","sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1//6.22287e-10",0.987858302604,2.03628580664e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033594_T001","Zm00001d033594",null,0.957694595802,9.93937461224e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049026_T007","Zm00001d049026","sp|P19672|YQXC_BACSU Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) GN=yqxC PE=3 SV=3//2.19335e-11",0.978657440833,3.36489622832E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045544_T001","Zm00001d045544","sp|P21240|CPNB1_ARATH Chaperonin 60 subunit beta 1, chloroplastic OS=Arabidopsis thaliana GN=CPN60B1 PE=1 SV=3//0",0.972674103484,1.14614600033E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044537_T001","Zm00001d044537","sp|Q9C7V5|PP104_ARATH Putative pentatricopeptide repeat-containing protein At1g64310 OS=Arabidopsis thaliana GN=PCMP-E65 PE=3 SV=1//9.28652e-122",0.977874793609,4.02350583961e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038380_T001","Zm00001d038380","sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1 SV=1//1.58516e-109",-0.952729478198,1.71662600367e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d047506_T004","Zm00001d047506","sp|Q9AYT5|RSH1_ORYSJ Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica GN=RSH1 PE=2 SV=1//2.11781e-118",0.952163627202,1.82011068706e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011377_T002","Zm00001d011377","sp|Q6I581|GH35_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1//0",0.979063666881,3.05871297179e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028050_T001","Zm00001d028050","sp|Q5E915|RBBP_ARATH Protein RBL OS=Arabidopsis thaliana GN=RBL PE=1 SV=1//0",0.955941621005,1.2140382446E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002272_T009","Zm00001d002272","sp|Q8R3Q2|PP6R2_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus musculus GN=Ppp6r2 PE=1 SV=1//6.5267e-15",0.967432931325,2.73164209919E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d048515_T003","Zm00001d048515",null,0.967652279045,2.6418590382E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018238_T001","Zm00001d018238","sp|Q6Z7L3|TRL31_ORYSJ Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0774100 PE=3 SV=2//4.97773e-79",0.960968592826,6.68125229364e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051453_T001","Zm00001d051453",null,0.95163602607,1.92100051821e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033155_T001","Zm00001d033155","sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic OS=Arabidopsis thaliana GN=CBSDUFCH2 PE=2 SV=2//0",0.967953926839,2.52223964159e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d046354_T001","Zm00001d046354","sp|Q5HZ36|GAT21_ARATH GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2//3.97688e-17",0.953379215952,1.60361610479e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020603_T004","Zm00001d020603","sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1//2.06025e-11",0.960977441633,6.67378210473e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d004279_T001","Zm00001d004279","sp|Q6PWU2|ATESY_VITVI (-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1//1.23527e-118",0.950552623426,2.14207574323e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d030760_T006","Zm00001d030760","sp|Q4R5D4|ASND1_MACFA Asparagine synthetase domain-containing protein 1 OS=Macaca fascicularis GN=ASNSD1 PE=2 SV=1//1.29391e-79",0.961389233908,6.33341508571e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033666_T001","Zm00001d033666","sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1//1.10018e-49",0.971784633658,1.3432152679E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d005950_T001","Zm00001d005950","sp|Q9FMF7|DIT21_ARATH Dicarboxylate transporter 2.1, chloroplastic OS=Arabidopsis thaliana GN=DIT2-1 PE=1 SV=1//0",0.974507088072,8.12466192102e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038485_T001","Zm00001d038485","sp|Q9LZV4|STN8_ARATH Serine/threonine-protein kinase STN8, chloroplastic OS=Arabidopsis thaliana GN=STN8 PE=2 SV=1//0",0.971442834319,1.42574729356e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049232_T002","Zm00001d049232",null,0.972298590175,1.22631637733e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023990_T001","Zm00001d023990","sp|Q9SLN8|DBR_TOBAC 2-alkenal reductase (NADP(+)-dependent) OS=Nicotiana tabacum GN=DBR PE=1 SV=1//1.38016e-163",0.987223188061,2.62477661828e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001847_T004","Zm00001d001847",null,0.973719142024,9.44777973633E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036148_T004","Zm00001d036148","sp|B2LXS7|WHY1_MAIZE Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays GN=WHY1 PE=2 SV=1//5.47399e-13",0.962200650311,5.70313273052e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034897_T001","Zm00001d034897","sp|P19954|PRSP1_SPIOL Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea GN=PSRP1 PE=1 SV=2//1.16945e-82",0.982194726947,1.36792404071e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043325_T001","Zm00001d043325","sp|F4IHY7|PTA12_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 OS=Arabidopsis thaliana GN=PTAC12 PE=1 SV=1//8.3153e-137",0.95155018988,1.93782561464e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034523_T002","Zm00001d034523","sp|Q8W496|PTC52_ARATH Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1//3.53719e-64",0.965002885314,3.89861037231e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d006717_T010","Zm00001d006717","sp|Q9SJT1|SAE2_ARATH SUMO-activating enzyme subunit 2 OS=Arabidopsis thaliana GN=SAE2 PE=1 SV=1//3.28371e-06",0.951947388617,1.86093900112E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017395_T001","Zm00001d017395","sp|Q8H1Q1|TL225_ARATH Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1//2.67958e-105",0.974323112713,8.41948386565e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014736_T001","Zm00001d014736","sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1//3.25807e-12",0.963701887639,4.66889599648E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025870_T001","Zm00001d025870","sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1//4.56458e-31",0.951424446672,1.96268386432e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013135_T002","Zm00001d013135","sp|Q9FI13|RPI4_ARATH Probable ribose-5-phosphate isomerase 4, chloroplastic OS=Arabidopsis thaliana GN=RPI4 PE=2 SV=1//1.08265e-76",0.9612045302509999,6.48433200467e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039456_T001","Zm00001d039456",null,0.971032489269,1.53010991433E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032223_T001","Zm00001d032223","sp|Q7XKU5|DAO_ORYSJ 2-oxoglutarate-dependent dioxygenase DAO OS=Oryza sativa subsp. japonica GN=DAO PE=2 SV=2//1.87725e-148",-0.958357567402,9.19491943797e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039416_T001","Zm00001d039416","sp|Q99685|MGLL_HUMAN Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2//1.27426e-32",-0.957908174195,9.69450750027e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033898_T002","Zm00001d033898","sp|Q94KL5|BLH4_ARATH BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=1 SV=2//2.68957e-117",0.974574077192,8.01937742878e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015605_T001","Zm00001d015605","sp|P56185|RNJ_HELPY Ribonuclease J OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=rnj PE=1 SV=1//1.06864e-13",0.961942522669,5.8979658335e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032230_T001","Zm00001d032230","sp|B1B1U3|ZSS1_ZINZE Alpha-humulene synthase OS=Zingiber zerumbet GN=ZSS1 PE=1 SV=1//1.67143e-112",0.955307457788,1.30256136743e-06]
["LNC_000575","XLOC_006280","lncRNA","GRMZM5G879235_T01","GRMZM5G879235","sp|P09562|RPOA_MAIZE DNA-directed RNA polymerase subunit alpha OS=Zea mays GN=rpoA PE=1 SV=2//0",0.954663577386,1.39760668683E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036875_T001","Zm00001d036875","sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana GN=NFD4 PE=3 SV=1//1.2687e-139",0.953288428982,1.61904161988e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002943_T007","Zm00001d002943","sp|Q7XUK4|GUN12_ORYSJ Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2//0",0.955518300843,1.27257968208E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034255_T001","Zm00001d034255","sp|Q8GUH2|Y1015_ARATH Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1//2.27195e-46",0.951614138089,1.92527981957E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037190_T001","Zm00001d037190","sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1//2.73656e-106",0.969799267359,1.88083779884E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052932_T001","Zm00001d052932","sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO PE=2 SV=1//0",0.964570543643,4.1424176711e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029095_T014","Zm00001d029095","sp|Q9AYT5|RSH1_ORYSJ Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica GN=RSH1 PE=2 SV=1//7.26566e-133",0.978990628213,3.11205787806e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015929_T002","Zm00001d015929","sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=typA PE=3 SV=1//2.21073e-36",0.978749999882,3.29307356939e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d009364_T001","Zm00001d009364","sp|Q5JJY4|P2C04_ORYSJ Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1//0",0.961218638127,6.47270498977e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d031872_T001","Zm00001d031872","sp|F4IV66|RNE_ARATH Ribonuclease E/G-like protein, chloroplastic OS=Arabidopsis thaliana GN=RNE PE=1 SV=1//6.37225e-87",0.961809498179,6.00041638155e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d041362_T003","Zm00001d041362","sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1//3.56933e-06",0.961911741456,5.92154781653e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011362_T002","Zm00001d011362","sp|P82715|PPD5_ARATH PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana GN=PPD5 PE=1 SV=3//2.07895e-08",0.966520929683,3.13133022845e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d016793_T002","Zm00001d016793","sp|Q2V3L3|Y4634_ARATH Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1//3.90294e-63",0.953458613695,1.59022151891e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d009775_T001","Zm00001d009775","sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1//1.73695e-28",0.968326370673,2.38053344814e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d005099_T003","Zm00001d005099","sp|Q6GLA2|SAMC_XENTR S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1//4.13206e-07",0.964405412727,4.23867471788e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d021263_T001","Zm00001d021263","sp|Q652B0|HFB2C_ORYSJ Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1//1.36944e-108",-0.955387830055,1.2910671103e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053290_T001","Zm00001d053290","sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2//5.94336e-78",0.953854589698,1.52473849369E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043328_T003","Zm00001d043328","sp|C0PN26|LISC2_MAIZE Lipoyl synthase 2, chloroplastic OS=Zea mays GN=LIP1P-2 PE=2 SV=1//0",0.960766805464,6.85341327245e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002350_T001","Zm00001d002350","sp|Q84ZW8|ACSS_MAIZE Acyclic sesquiterpene synthase OS=Zea mays GN=TPS1 PE=1 SV=1//0",0.951787673421,1.89155884511e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015374_T002","Zm00001d015374",null,0.9756196211,6.51213380998e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045373_T001","Zm00001d045373","sp|Q0J6P7|KAD5_ORYSJ Probable adenylate kinase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0288200 PE=2 SV=2//5.25489e-06",0.966069088742,3.34586365724e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d047077_T001","Zm00001d047077","sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3//0",0.979258958024,2.91965114307e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018242_T001","Zm00001d018242","sp|Q6Z7K5|MTP3_ORYSJ Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1//0",0.986578366614,3.35380345717e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029635_T001","Zm00001d029635","sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1//1.62714e-105",0.956691563622,1.11558921789e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007117_T002","Zm00001d007117","sp|Q0D3S3|OBGC1_ORYSJ Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. japonica GN=OBGC1 PE=3 SV=1//9.28322e-19",0.960055867506,7.48826272767e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d046971_T001","Zm00001d046971","sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1//1.97766e-91",0.95253492358,1.75166568672E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029822_T001","Zm00001d029822","sp|Q6TBX7|LUT1_ARATH Carotene epsilon-monooxygenase, chloroplastic OS=Arabidopsis thaliana GN=CYP97C1 PE=1 SV=1//3.21976e-113",0.957055339288,1.07017638928E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051790_T001","Zm00001d051790","sp|Q8W4A5|APO2_ARATH APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1//8.7313e-148",0.975038450441,7.31903999629e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001741_T001","Zm00001d001741",null,0.982254216299,1.3453586245E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014866_T002","Zm00001d014866","sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3//1.30788e-55",0.969154646998,2.08804859847e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052353_T004","Zm00001d052353",null,0.971597336558,1.38795518856E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012247_T003","Zm00001d012247","sp|Q84WV0|GLYC7_ARATH Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1//0",0.97596079489,6.07254613261e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018330_T003","Zm00001d018330","sp|F4I532|PRFB2_ARATH Peptide chain release factor PrfB2, chloroplastic OS=Arabidopsis thaliana GN=PRFB2 PE=3 SV=1//1.84988e-53",0.954261158758,1.45974873966e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045746_T001","Zm00001d045746","sp|Q1RIM1|TOP1_RICBR DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) GN=topA PE=3 SV=1//1.95217e-124",0.954683522007,1.39458235004E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d000313_T001","Zm00001d000313","sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=2 SV=1//2.5001e-29",0.957516655133,1.01471112779e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038163_T036","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.971325363537,1.45502577986e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018781_T001","Zm00001d018781","sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1//1.6224e-62",0.970996795369,1.53946760895E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d016853_T001","Zm00001d016853","sp|Q9FH50|APO3_ARATH APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1//1.73486e-140",0.966239236765,3.2637483649e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d047442_T001","Zm00001d047442",null,0.986025272608,4.10038869525e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044101_T002","Zm00001d044101","sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1//7.37244e-16",0.965678226223,3.5407283594e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033591_T001","Zm00001d033591","sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1//0",0.987056918327,2.79928658031e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018467_T001","Zm00001d018467",null,0.961898223231,5.93192799547e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015210_T001","Zm00001d015210","sp|Q6MEG4|RSMH_PARUW Ribosomal RNA small subunit methyltransferase H OS=Protochlamydia amoebophila (strain UWE25) GN=rsmH PE=3 SV=1//2.04805e-67",0.956435906838,1.14841014698E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034892_T001","Zm00001d034892","sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1//0",0.976519093536,5.40446112307e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043295_T003","Zm00001d043295","sp|F4HXQ7|MYOB1_ARATH Myosin-binding protein 1 OS=Arabidopsis thaliana GN=MYOB1 PE=1 SV=1//5.06569e-17",-0.957096890758,1.06508408757E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018916_T001","Zm00001d018916","sp|Q96MB7|HARB1_HUMAN Putative nuclease HARBI1 OS=Homo sapiens GN=HARBI1 PE=1 SV=1//1.3766e-17",0.97958835234,2.69655158203e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022804_T001","Zm00001d022804",null,0.965005361926,3.89724742256e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045421_T001","Zm00001d045421","sp|O65693|RBFA_ARATH Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana GN=At4g34730 PE=2 SV=2//2.95222e-66",0.951042631467,2.03971888468e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012597_T004","Zm00001d012597",null,0.961611916852,6.15519151426e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039036_T002","Zm00001d039036","sp|A5GQ79|RIMM_SYNR3 Ribosome maturation factor RimM OS=Synechococcus sp. (strain RCC307) GN=rimM PE=3 SV=1//1.33275e-09",0.984815894069,6.19689544124e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d019501_T004","Zm00001d019501","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//5.31358e-28",0.967878395256,2.55177906361E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042044_T002","Zm00001d042044","sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2//2.14938e-163",0.969798013769,1.88122421196E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013218_T001","Zm00001d013218","sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1//6.19559e-12",0.957295935822,1.04095645481e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d030790_T002","Zm00001d030790","sp|Q8GWT1|GAUTE_ARATH Probable galacturonosyltransferase 14 OS=Arabidopsis thaliana GN=GAUT14 PE=2 SV=1//6.04313e-42",-0.956972534741,1.08038206781e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d005346_T001","Zm00001d005346","sp|Q94A68|Y1669_ARATH Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=2 SV=1//1.05655e-20",0.955262709842,1.3089960027e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042841_T001","Zm00001d042841","sp|Q8W0H5|PHT43_ORYSJ Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1//0",0.9516863085,1.91119841286e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043348_T016","Zm00001d043348","sp|Q9URY7|FMDA_SCHPO Putative formamidase C869.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC869.04 PE=3 SV=1//7.72946e-12",0.962599520388,5.41215959826e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053124_T001","Zm00001d053124","sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1//4.40985e-74",0.977923867555,3.97941066765e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d021025_T001","Zm00001d021025","sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1//5.53838e-136",0.959005745888,8.51057825546e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d041067_T001","Zm00001d041067","sp|Q2QR07|SWT13_ORYSJ Bidirectional sugar transporter SWEET13 OS=Oryza sativa subsp. japonica GN=SWEET13 PE=2 SV=1//2.91784e-124",0.97791570781,3.98671573532e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d009596_T001","Zm00001d009596","sp|B3ETC6|ERA_AMOA5 GTPase Era OS=Amoebophilus asiaticus (strain 5a2) GN=era PE=3 SV=1//4.37367e-68",0.973872301513,9.17803730793E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d005159_T009","Zm00001d005159","sp|Q9SMB1|SPD1_ORYSJ Spermidine synthase 1 OS=Oryza sativa subsp. japonica GN=SPDSYN1 PE=2 SV=1//3.94598e-66",0.953519643668,1.57998609085E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d024718_T004","Zm00001d024718","sp|Q7XA78|D27_ARATH Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana GN=D27 PE=1 SV=1//3.20605e-18",0.964245339076,4.3336730382e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033527_T001","Zm00001d033527","sp|Q9AUK4|MRS2A_ORYSJ Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica GN=MRS2-A PE=2 SV=1//6.08997e-07",0.963252568874,4.96134138439e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034318_T001","Zm00001d034318","sp|P37518|YCHF_BACSU Ribosome-binding ATPase YchF OS=Bacillus subtilis (strain 168) GN=ychF PE=3 SV=1//2.11142e-139",0.962129309267,5.75646115442e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038163_T005","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.977724111957,4.16133920655e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d041961_T001","Zm00001d041961",null,0.958912628489,8.60631923061e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025980_T007","Zm00001d025980","sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=2 SV=1//1.18171e-59",0.974264495398,8.51518695555e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008789_T020","Zm00001d008789",null,0.951919320143,1.86629147647E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037058_T001","Zm00001d037058","sp|A2YCH5|CDKF1_ORYSI Cyclin-dependent kinase F-1 OS=Oryza sativa subsp. indica GN=CDKF-1 PE=3 SV=1//0",0.979989473463,2.44345075284e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d000350_T001","Zm00001d000350","sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays GN=SECY PE=2 SV=1//6.08807e-169",0.965553706792,3.60466685168e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d030549_T001","Zm00001d030549","sp|Q9MTQ6|RCCR_HORVU Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=2 SV=1//9.8651e-108",0.976943483216,4.93692491332e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037227_T006","Zm00001d037227",null,0.954890616956,1.36348503954E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042044_T001","Zm00001d042044","sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2//2.14938e-163",0.980532746052,2.13123181325e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028298_T001","Zm00001d028298",null,0.954565789808,1.4125102914e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026606_T001","Zm00001d026606","sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1//1.82111e-10",0.982950480903,1.10263087549E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045740_T001","Zm00001d045740","sp|Q9H2H9|S38A1_HUMAN Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1//3.55177e-18",0.980946043185,1.91573072961E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034721_T001","Zm00001d034721","sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2//0",0.969588058778,1.94683884125e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018207_T001","Zm00001d018207","sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2//0",0.951350101889,1.97749967157e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038842_T001","Zm00001d038842","sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1//7.85706e-100",0.95837602596,9.17484544116e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034401_T001","Zm00001d034401","sp|Q852K0|EGY1_ORYSJ Probable zinc metalloprotease EGY1, chloroplastic OS=Oryza sativa subsp. japonica GN=EGY1 PE=2 SV=3//1.03997e-11",0.963516771326,4.78767268053e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023534_T001","Zm00001d023534","sp|Q9SRE0|5FCLL_ARATH 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 OS=Arabidopsis thaliana GN=COG0212 PE=2 SV=1//3.46236e-137",0.964689915557,4.07392291013e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040696_T003","Zm00001d040696","sp|Q84N48|CAF2P_MAIZE CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1//2.18411e-45",0.978648783797,3.37167711528e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d000618_T001","Zm00001d000618",null,0.967792846659,2.58556771993e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027893_T002","Zm00001d027893","sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2//0",-0.957522592963,1.0140124028E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d009189_T001","Zm00001d009189",null,0.954488805981,1.42433173922E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008229_T001","Zm00001d008229","sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1//9.85297e-31",0.954693595789,1.39305676994e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d021762_T001","Zm00001d021762","sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1//4.611e-25",0.954864140365,1.36742977697e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040191_T001","Zm00001d040191","sp|Q5FWP4|CHFR_XENLA E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis GN=chfr PE=1 SV=1//3.75757e-09",0.956303684901,1.1656827883E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d005785_T001","Zm00001d005785","sp|Q8VYD6|PP374_ARATH Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana GN=CBSPPR1 PE=2 SV=1//6.10646e-43",0.957360929348,1.03317285749e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d046405_T001","Zm00001d046405","sp|Q8H0V5|OCP3_ARATH Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 OS=Arabidopsis thaliana GN=OCP3 PE=1 SV=1//2.85473e-54",0.978795261137,3.2584001719e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033985_T001","Zm00001d033985",null,0.964880133369,3.96664074698E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d016544_T006","Zm00001d016544",null,-0.963627866782,4.7161057319e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012168_T001","Zm00001d012168","sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1//7.37537e-20",0.969340976765,2.02637546076e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d005716_T002","Zm00001d005716","sp|Q9CXS4|CENPV_MOUSE Centromere protein V OS=Mus musculus GN=Cenpv PE=2 SV=2//1.37474e-38",-0.952760272139,1.71113130819e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d010121_T001","Zm00001d010121","sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1//8.39293e-12",0.959352867669,8.16110372615e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044599_T004","Zm00001d044599","sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2//0",0.961500487918,6.24386799375e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028285_T001","Zm00001d028285","sp|Q84RR2|ARI2_ARATH Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana GN=ARI2 PE=2 SV=1//0",0.964495797693,4.18577036587E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038163_T002","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.986120454514,3.96327126673e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020971_T001","Zm00001d020971","sp|Q41822|IOJAP_MAIZE Protein Iojap, chloroplast OS=Zea mays GN=Ij PE=1 SV=1//5.34461e-126",0.959241711638,8.27174822193e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d006700_T005","Zm00001d006700",null,0.977427629589,4.4435224611e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044970_T001","Zm00001d044970","sp|Q9ZVN4|Y1500_ARATH Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1//1.88602e-84",0.964019685117,4.47045811036e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020437_T001","Zm00001d020437","sp|Q9XI84|RBCMT_ARATH [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1//0",0.981025794444,1.87622419823E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053412_T003","Zm00001d053412","sp|Q9FFX0|RBL9_ARATH RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana GN=RBL9 PE=2 SV=1//6.17463e-09",0.966034295989,3.36285555402e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027846_T001","Zm00001d027846","sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2//1.64065e-49",0.979296465637,2.89352963811e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d046923_T001","Zm00001d046923","sp|O49485|SERA1_ARATH D-3-phosphoglycerate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=PGDH1 PE=1 SV=1//0",0.974919826771,7.4931147287e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045550_T002","Zm00001d045550","sp|O04647|PP399_ARATH Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana GN=EMB976 PE=2 SV=2//3.28581e-08",0.974212068057,8.60151598836e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025713_T001","Zm00001d025713","sp|Q7X7L3|ELP3_ORYSJ Elongator complex protein 3 OS=Oryza sativa subsp. japonica GN=ELP3 PE=2 SV=2//3.88597e-139",0.95161096702,1.92590041914e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d010456_T002","Zm00001d010456",null,0.970014650395,1.81537871402e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026587_T002","Zm00001d026587","sp|Q0J952|C3H32_ORYSJ Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica GN=Os04g0671800 PE=2 SV=1//0",0.963232505648,4.97473134686e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018413_T017","Zm00001d018413","sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana GN=CLPP6 PE=1 SV=1//5.64111e-98",0.9537853302,1.53603478203E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022274_T001","Zm00001d022274","sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1//0",0.9506114494,2.1295770023e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018891_T004","Zm00001d018891","sp|Q69LE7|PNP1_ORYSJ Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PNP1 PE=2 SV=1//4.17554e-11",0.953018481168,1.66560482651e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d050921_T003","Zm00001d050921","sp|P34091|RL6_MESCR 60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1//1.61487e-32",0.974081947335,8.81879289594e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d024699_T002","Zm00001d024699",null,0.953446364323,1.59228220431e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007905_T015","Zm00001d007905","sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EMB2247 PE=3 SV=1//1.04658e-96",0.978452466547,3.52839695239e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d046837_T002","Zm00001d046837",null,0.977810566213,4.0818044944e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017790_T002","Zm00001d017790","sp|Q6YV23|CARA_ORYSJ Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=CARA PE=2 SV=2//0",0.975263917864,6.99706226293e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d050635_T001","Zm00001d050635","sp|P21569|CYPH_MAIZE Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1//2.84401e-104",0.960382822665,7.19074759736E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015290_T001","Zm00001d015290","sp|Q67UX0|ADO2_ORYSJ Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0150800 PE=3 SV=1//0",0.961442556883,6.29036958077e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014737_T001","Zm00001d014737","sp|Q9LMR3|TYRA2_ARATH Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1//5.23667e-104",0.973865593842,9.18972080655e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d016690_T001","Zm00001d016690","sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1//1.55388e-15",0.971642728734,1.37700497671e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029208_T001","Zm00001d029208","sp|Q5HZL9|HDHD3_XENLA Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1//4.66681e-16",0.957066238738,1.06883875106e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d021518_T002","Zm00001d021518","sp|Q0WRJ7|FK202_ARATH Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1//5.27782e-87",0.959591043394,7.92798134253e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d019899_T001","Zm00001d019899","sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1//1.20195e-95",0.962693958369,5.34502734517E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002961_T002","Zm00001d002961","sp|Q6K833|MCES2_ORYSJ mRNA cap guanine-N7 methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Os02g0780600 PE=2 SV=1//2.44093e-52",0.953388108273,1.60211151368E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012834_T003","Zm00001d012834","sp|Q4G2J4|DER21_MAIZE Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2//3.06413e-162",-0.95593613955,1.21478235901e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011013_T001","Zm00001d011013","sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2//0",-0.953731956776,1.544785261E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049379_T013","Zm00001d049379","sp|Q9Y5Q9|TF3C3_HUMAN General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=1//2.58203e-21",0.965683008353,3.53829093136e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032175_T001","Zm00001d032175","sp|Q6ER21|ZHD9_ORYSJ Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica GN=ZHD9 PE=3 SV=2//2.48259e-61",0.980753141291,2.01403596023e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034900_T001","Zm00001d034900","sp|Q8H112|PGL1A_ARATH PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1//1.02037e-128",0.96784415138,2.56526174747e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033015_T001","Zm00001d033015",null,0.962167497035,5.72786620801e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032919_T001","Zm00001d032919","sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1//1.91809e-17",0.970158299111,1.77273856927e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d006089_T001","Zm00001d006089","sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1//8.31596e-22",-0.953453850357,1.59102259322e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007092_T001","Zm00001d007092","sp|A2BW76|EFTS_PROM5 Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1//2.04558e-73",0.963851540447,4.57459662817e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007092_T003","Zm00001d007092","sp|A2BW76|EFTS_PROM5 Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1//2.04558e-73",0.966883774161,2.9670994639e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032204_T001","Zm00001d032204",null,0.972152249258,1.25874200396e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d048880_T001","Zm00001d048880","sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1//0",0.966059191735,3.35069013868e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d050920_T001","Zm00001d050920","sp|P34091|RL6_MESCR 60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1//2.37799e-32",0.956980699804,1.07937230132e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034823_T002","Zm00001d034823","sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3//4.93621e-07",0.97865030783,3.37048258192e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027517_T001","Zm00001d027517","sp|Q8L540|LTO1_ARATH Thiol-disulfide oxidoreductase LTO1 OS=Arabidopsis thaliana GN=LTO1 PE=1 SV=1//3.48151e-16",0.96180240376,6.00591969935e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027460_T001","Zm00001d027460","sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus GN=Phrf1 PE=2 SV=2//3.3243e-07",0.954781289787,1.37983220805E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d048717_T003","Zm00001d048717","sp|Q8RX79|APG3_ARATH Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana GN=APG3 PE=2 SV=1//0",0.961377111055,6.34323395587e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d004196_T004","Zm00001d004196","sp|Q87L85|DUSA_VIBPA tRNA-dihydrouridine(20/20a) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1//1.37067e-32",0.973292142278,1.02332860408E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029396_T002","Zm00001d029396",null,0.960875242625,6.76046433279E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d050440_T001","Zm00001d050440","sp|Q92564|DCNL4_HUMAN DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2//6.67115e-31",0.951311026658,1.98532226747e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007417_T001","Zm00001d007417","sp|Q55750|MFD_SYNY3 Transcription-repair-coupling factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mfd PE=3 SV=1//2.84613e-156",0.986522273493,3.42415296117e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d019627_T002","Zm00001d019627","sp|Q8LPQ6|AB28B_ARATH ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 PE=2 SV=1//0",0.960288165856,7.27589735572e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018401_T001","Zm00001d018401","sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1//7.71156e-63",0.974320051484,8.42446055138e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018401_T002","Zm00001d018401","sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=2 SV=1//7.71156e-63",0.972882905345,1.10340856008E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d006620_T001","Zm00001d006620","sp|Q8GZ79|TI201_ARATH Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1//1.1456e-48",0.960155870706,7.39624533619e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028338_T001","Zm00001d028338",null,0.952821672564,1.70021701651E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049687_T001","Zm00001d049687","sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=3 SV=1//7.6969e-54",0.960488316468,7.09678414479e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008645_T001","Zm00001d008645","sp|O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1//1.1528e-33",0.974432045153,8.24390871124e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011513_T001","Zm00001d011513","sp|O22386|RK12_ORYSJ 50S ribosomal protein L12, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL12-2 PE=2 SV=2//1.74381e-48",0.977764393759,4.12412921591e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033259_T001","Zm00001d033259","sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1//0",0.968604830639,2.27878468539e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d035515_T001","Zm00001d035515","sp|Q83Q35|ALX_SHIFL Inner membrane protein alx OS=Shigella flexneri GN=alx PE=3 SV=1//1.64647e-14",0.979176046233,2.97806090899e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034007_T001","Zm00001d034007","sp|Q9C503|NDF5_ARATH Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana GN=NDF5 PE=2 SV=1//4.66213e-45",0.980380077499,2.21555391811E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d035377_T001","Zm00001d035377",null,0.973843701141,9.22793623737e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037512_T003","Zm00001d037512","sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1//1.5693e-06",0.968614559163,2.27529354024E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d050969_T001","Zm00001d050969","sp|P46280|EFTU2_SOYBN Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1//0",0.959499450714,8.01699605812e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022110_T001","Zm00001d022110","sp|B8B8C5|ALFL9_ORYSI PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 SV=1//4.41017e-22",0.981413227522,1.69343721268e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026211_T002","Zm00001d026211",null,0.955326946964,1.29976673691E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003676_T001","Zm00001d003676","sp|Q339N5|CSLH1_ORYSJ Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2//0",0.950606246058,2.13068021804e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044513_T008","Zm00001d044513","sp|Q652N5|PHT44_ORYSJ Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1//7.83898e-81",0.966129770111,3.31639186335e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007838_T001","Zm00001d007838","sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800 OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1//6.67497e-23",0.967033057792,2.90155422356e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d050341_T001","Zm00001d050341",null,0.959153518475,8.36038044127e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032301_T007","Zm00001d032301","sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana GN=At1g78140 PE=2 SV=1//1.37523e-07",0.962326771323,5.609816629e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d035588_T001","Zm00001d035588","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//1.08794e-169",0.976148868925,5.84053441166e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d019052_T001","Zm00001d019052","sp|Q9SR70|FK164_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1//1.06624e-94",0.974833521614,7.62182352787e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033896_T001","Zm00001d033896","sp|Q6AVG6|ISPH_ORYSJ 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPH PE=2 SV=1//0",0.960028673628,7.51344162886e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d035092_T001","Zm00001d035092","sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1//3.96804e-27",0.952856526136,1.6940462062e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043841_T010","Zm00001d043841","sp|Q9SEX2|KTNA1_ARATH Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1//3.28265e-62",-0.954125447507,1.48119266115e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052475_T001","Zm00001d052475","sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1//5.33451e-171",0.978433106366,3.54416123116e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017139_T002","Zm00001d017139","sp|Q6K8J4|ISPG_ORYSJ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic OS=Oryza sativa subsp. japonica GN=ISPG PE=2 SV=1//0",0.965105675049,3.8423598836e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052475_T002","Zm00001d052475","sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1//5.33451e-171",0.969714628517,1.90706940906E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001806_T001","Zm00001d001806","sp|P73625|MUTS2_SYNY3 Endonuclease MutS2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mutS2 PE=3 SV=1//5.60632e-97",0.957794047238,9.82475023559e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d019461_T001","Zm00001d019461","sp|Q95KD5|DJC18_MACFA DnaJ homolog subfamily C member 18 OS=Macaca fascicularis GN=DNAJC18 PE=2 SV=1//5.0148e-10",-0.954515885298,1.42016458906E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017139_T004","Zm00001d017139","sp|Q6K8J4|ISPG_ORYSJ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic OS=Oryza sativa subsp. japonica GN=ISPG PE=2 SV=1//0",0.972138179938,1.26189503735e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012260_T001","Zm00001d012260","sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1//0",0.97004837143,1.80529655003e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039349_T005","Zm00001d039349",null,0.971595339811,1.38843846198e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003252_T005","Zm00001d003252","sp|P37830|G6PD_SOLTU Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Solanum tuberosum GN=G6PDH PE=2 SV=1//2.15011e-66",0.956829363855,1.09821011396e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015060_T001","Zm00001d015060","sp|Q8W4G3|MATE4_ARATH MATE efflux family protein 4, chloroplastic OS=Arabidopsis thaliana GN=DTX46 PE=2 SV=1//0",0.976022653637,5.99544027757e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026654_T001","Zm00001d026654","sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1//0",0.966066139596,3.34730128948e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d047634_T001","Zm00001d047634","sp|Q9S834|CLPP5_ARATH ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1//7.10032e-133",0.954986442793,1.34928341655E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039400_T012","Zm00001d039400","sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens GN=CNOT4 PE=1 SV=3//5.16685e-38",0.969753492003,1.89498877701e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037240_T007","Zm00001d037240","sp|Q8LE52|DHAR3_ARATH Glutathione S-transferase DHAR3, chloroplastic OS=Arabidopsis thaliana GN=DHAR3 PE=1 SV=1//2.7762e-78",0.950963985304,2.05588023672E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053743_T001","Zm00001d053743",null,0.974064828419,8.84770057219e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037856_T001","Zm00001d037856","sp|Q1JPN0|STR7_ARATH Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana GN=STR7 PE=2 SV=1//2.85844e-168",0.970220047671,1.75465616703E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040202_T009","Zm00001d040202","sp|Q5RBR3|CHMP5_PONAB Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1//8.18321e-31",0.958841246647,8.68028986689E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017424_T011","Zm00001d017424","sp|Q6H6R9|FTSH7_ORYSJ ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1//3.47586e-47",0.955034174839,1.34225335513E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020220_T001","Zm00001d020220","sp|Q9M9V6|ICS2_ARATH Isochorismate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=ICS2 PE=2 SV=2//1.28154e-12",0.955760247817,1.23885278258E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003778_T001","Zm00001d003778","sp|Q9LZB8|AB29B_ARATH ABC transporter B family member 29, chloroplastic OS=Arabidopsis thaliana GN=ABCB29 PE=2 SV=1//1.10525e-151",0.958974602998,8.54250394866e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022557_T001","Zm00001d022557","sp|Q9XFB7|NAS9_HORVU Nicotianamine synthase 9 OS=Hordeum vulgare GN=NAS9 PE=1 SV=1//3.76637e-151",0.977871381733,4.02658597576e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d031163_T003","Zm00001d031163","sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 OS=Arabidopsis thaliana GN=At3g48420 PE=1 SV=1//2.70989e-18",0.962377125622,5.57290058989e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025848_T001","Zm00001d025848",null,0.986519801842,3.42727934921e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d046135_T001","Zm00001d046135","sp|Q9MAH3|DJ1B_ARATH Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=1 SV=1//6.00371e-26",0.954963565242,1.35266320678E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d009459_T001","Zm00001d009459",null,0.979239206344,2.9334822349e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029482_T003","Zm00001d029482",null,0.981809690346,1.52138326381e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026634_T001","Zm00001d026634","sp|Q940P5|TET19_ARATH Tetraspanin-19 OS=Arabidopsis thaliana GN=TOM2AH3 PE=2 SV=1//3.00721e-52",0.957336125224,1.03613791635E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040678_T013","Zm00001d040678",null,0.982700440937,1.18539331684E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049282_T001","Zm00001d049282","sp|Q9SCP6|U73D1_ARATH UDP-glycosyltransferase 73D1 OS=Arabidopsis thaliana GN=UGT73D1 PE=3 SV=1//1.22996e-48",0.954428267187,1.4336829639e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020445_T001","Zm00001d020445","sp|O05525|YDIL_BACSU Putative membrane peptidase YdiL OS=Bacillus subtilis (strain 168) GN=ydiL PE=3 SV=1//3.8825e-07",0.965943117774,3.40771044272e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d004196_T005","Zm00001d004196","sp|Q87L85|DUSA_VIBPA tRNA-dihydrouridine(20/20a) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1//1.37067e-32",0.958015998553,9.57272061175e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d010204_T001","Zm00001d010204","sp|Q6P7K0|CMBL_XENTR Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1//7.78681e-19",0.965703841522,3.52768793732e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008645_T002","Zm00001d008645","sp|O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1//1.1528e-33",0.975155509539,7.15043433352e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d010340_T001","Zm00001d010340",null,0.973027319938,1.07459962928E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008826_T101","Zm00001d008826","sp|Q9AWL7|GIGAN_ORYSJ Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2//0",0.951184115847,2.01089841401e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d021834_T001","Zm00001d021834","sp|Q8GZ79|TI201_ARATH Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1//2.19548e-49",0.9714559491,1.42250788482e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d030109_T001","Zm00001d030109","sp|O82290|SKL2_ARATH Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana GN=SKL2 PE=2 SV=2//1.91317e-104",0.97397974361,8.99249998909e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d048441_T001","Zm00001d048441","sp|O49668|PAM68_ARATH Protein PAM68, chloroplastic OS=Arabidopsis thaliana GN=PAM68 PE=1 SV=1//2.79853e-46",0.969039031708,2.12706063873E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017118_T001","Zm00001d017118","sp|Q8LDL0|HHL1_ARATH Protein HHL1, chloroplastic OS=Arabidopsis thaliana GN=HHL1 PE=1 SV=1//3.41152e-64",0.964812276222,4.00465093975e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032333_T004","Zm00001d032333","sp|F4J117|LSF1_ARATH Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana GN=LSF1 PE=1 SV=1//4.95404e-20",0.976938940728,4.94175234067e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025656_T001","Zm00001d025656","sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2//0",0.977496574841,4.37658131958e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007378_T001","Zm00001d007378","sp|Q9ZQ99|U73C1_ARATH UDP-glycosyltransferase 73C1 OS=Arabidopsis thaliana GN=UGT73C1 PE=2 SV=1//5.32298e-61",0.951800675632,1.88905128162E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040450_T001","Zm00001d040450",null,0.980177245912,2.33167454233e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036642_T001","Zm00001d036642","sp|P42856|ZB14_MAIZE 14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1//2.81374e-52",0.956391304913,1.15421379254E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008226_T001","Zm00001d008226","sp|Q9SDI4|PHT41_ORYSJ Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1//0",0.967267530339,2.80093539029e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053298_T001","Zm00001d053298",null,0.97400677095,8.94630121095e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027854_T003","Zm00001d027854","sp|Q10R54|SUT1_ORYSJ Sucrose transport protein SUT1 OS=Oryza sativa subsp. japonica GN=SUT1 PE=1 SV=1//5.76601e-24",0.972618776691,1.15768822084E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049766_T001","Zm00001d049766","sp|Q9LVD4|ORP4C_ARATH Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana GN=ORP4C PE=2 SV=1//4.58701e-117",-0.968180098852,2.43541008454E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022551_T001","Zm00001d022551","sp|Q99575|POP1_HUMAN Ribonucleases P/MRP protein subunit POP1 OS=Homo sapiens GN=POP1 PE=1 SV=2//2.6805e-15",0.956919121387,1.08700616863e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002454_T001","Zm00001d002454","sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1//0",0.972819909257,1.11616654586E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008230_T001","Zm00001d008230","sp|Q5EFU4|CRD1_HORVU Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1//0",0.956536219027,1.13544205971e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027505_T002","Zm00001d027505","sp|Q75HY5|RSLE3_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica GN=Os05g0583200 PE=2 SV=1//7.02793e-18",0.978967746094,3.12892187715e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026244_T001","Zm00001d026244","sp|Q9I6J0|SPUE_PSEAE Spermidine-binding periplasmic protein SpuE OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=spuE PE=1 SV=1//1.24258e-15",0.966127075563,3.3176961578e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023237_T001","Zm00001d023237","sp|Q8GYP3|RDM4_ARATH RNA-directed DNA methylation 4 OS=Arabidopsis thaliana GN=RDM4 PE=1 SV=1//3.84258e-44",0.963326198349,4.91244721346e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007445_T001","Zm00001d007445","sp|Q2R2W1|ADO3_ORYSJ Adagio-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0547000 PE=2 SV=2//0",0.962707417784,5.33551371529e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039677_T002","Zm00001d039677",null,0.957750106916,9.87526419971e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003489_T001","Zm00001d003489","sp|P36774|LON2_MYXXA Lon protease 2 OS=Myxococcus xanthus GN=lon2 PE=1 SV=3//3.65682e-07",0.962480902245,5.49742823708e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027366_T002","Zm00001d027366","sp|Q10SM7|PX111_ORYSJ Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1//9.29918e-157",0.954889667685,1.36362631475e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013093_T003","Zm00001d013093","sp|Q852K0|EGY1_ORYSJ Probable zinc metalloprotease EGY1, chloroplastic OS=Oryza sativa subsp. japonica GN=EGY1 PE=2 SV=3//0",0.965833866198,3.46208173241E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043348_T022","Zm00001d043348","sp|Q9URY7|FMDA_SCHPO Putative formamidase C869.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC869.04 PE=3 SV=1//7.72946e-12",0.976609545581,5.30197237225e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042526_T001","Zm00001d042526","sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1//7.94753e-07",0.965665721685,3.54710816941E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d004956_T002","Zm00001d004956","sp|Q2QXY1|GLDH2_ORYSJ L-galactono-1,4-lactone dehydrogenase 2, mitochondrial OS=Oryza sativa subsp. japonica GN=GLDH2 PE=2 SV=1//0",0.954315567763,1.45122101181e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001932_T003","Zm00001d001932","sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2//1.01443e-96",0.956424179485,1.14993387146E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008439_T001","Zm00001d008439","sp|Q9C658|DCP5_ARATH Protein decapping 5 OS=Arabidopsis thaliana GN=DCP5 PE=1 SV=1//3.8981e-49",0.96309168499,5.06952391399e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001932_T001","Zm00001d001932","sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2//1.01443e-96",0.969390402324,2.01026193469E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018959_T001","Zm00001d018959","sp|Q9M1H3|AB4F_ARATH ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1//2.65009e-07",0.983792497636,8.57162785195e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027369_T004","Zm00001d027369","sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0117800 PE=2 SV=1//4.03104e-07",0.975513376676,6.65407882128e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027401_T008","Zm00001d027401","sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1//3.33328e-132",0.959181284304,8.33239542475e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038894_T001","Zm00001d038894","sp|Q9S713|STT7_ARATH Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana GN=STN7 PE=1 SV=1//0",0.963291404959,4.93550404101E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d010523_T007","Zm00001d010523","sp|Q9FQ11|SPP1_MAIZE Sucrose-phosphatase 1 OS=Zea mays GN=SPP1 PE=1 SV=1//1.14416e-18",0.9651859731,3.79886831325e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032790_T003","Zm00001d032790","sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2//8.12812e-08",0.990809672675,5.08442177249e-10]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002317_T009","Zm00001d002317","sp|Q9XIR4|APO1_ARATH APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1//1.54436e-151",0.977102682221,4.77009840516e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012177_T001","Zm00001d012177","sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1//0",0.973825187659,9.26035164106e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036430_T001","Zm00001d036430",null,0.962278781208,5.64518004786e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028964_T002","Zm00001d028964",null,0.950598595614,2.13230309254e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023238_T002","Zm00001d023238","sp|Q8LPS1|LACS6_ARATH Long chain acyl-CoA synthetase 6, peroxisomal OS=Arabidopsis thaliana GN=LACS6 PE=1 SV=1//2.63238e-28",0.961406140066,6.31974215848e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040446_T001","Zm00001d040446","sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1//0",0.954501684185,1.42234874501e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d010730_T001","Zm00001d010730","sp|Q9FME3|TCP5_ARATH Transcription factor TCP5 OS=Arabidopsis thaliana GN=TCP5 PE=2 SV=1//3.42266e-32",0.95671444927,1.11268790581E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043652_T002","Zm00001d043652","sp|Q9M9H6|CK1_ARATH Probable choline kinase 1 OS=Arabidopsis thaliana GN=CK1 PE=2 SV=1//1.1002e-15",0.958907077296,8.61205372793e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034453_T001","Zm00001d034453","sp|P42390|TRPA_MAIZE Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2//4.18283e-141",0.978940847082,3.14883932262e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013240_T002","Zm00001d013240",null,0.967541262575,2.68700178996e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027714_T002","Zm00001d027714","sp|P35159|RLUB_BACSU Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) GN=rluB PE=1 SV=2//1.91279e-18",0.960476139056,7.10758049749e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007774_T001","Zm00001d007774","sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2//2.00863e-21",0.964734146199,4.04877357862e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027714_T001","Zm00001d027714","sp|P35159|RLUB_BACSU Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) GN=rluB PE=1 SV=2//1.91279e-18",0.970125725714,1.78233690917e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037420_T001","Zm00001d037420","sp|Q9SJ85|Y2474_ARATH BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV=2//9.43977e-64",0.958877046823,8.64312847959e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d041036_T001","Zm00001d041036","sp|Q9FGP9|RER1_ARATH Protein RETICULATA-RELATED 1 OS=Arabidopsis thaliana GN=RER1 PE=2 SV=1//1.59782e-12",0.964094594792,4.42467488426e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049743_T001","Zm00001d049743","sp|Q5ZJC8|MTEF3_CHICK Transcription termination factor 3, mitochondrial OS=Gallus gallus GN=MTERF3 PE=2 SV=1//1.8255e-08",0.972967632555,1.08643297914E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037830_T001","Zm00001d037830","sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1//3.49122e-42",0.968705974051,2.24269609106E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051532_T001","Zm00001d051532","sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1//1.09583e-172",0.951038239332,2.04061877929E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007982_T001","Zm00001d007982",null,0.959595700054,7.92347681244e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011166_T001","Zm00001d011166",null,0.968292659917,2.39309254635e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045327_T001","Zm00001d045327","sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1//2.92668e-105",0.954513008555,1.42060682196e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d030688_T002","Zm00001d030688","sp|Q9LW20|SKL1_ARATH Probable inactive shikimate kinase like 1, chloroplastic OS=Arabidopsis thaliana GN=SKL1 PE=2 SV=1//2.57322e-46",0.966229890555,3.2682169171e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049440_T005","Zm00001d049440","sp|Q0J7J7|CAF2M_ORYSJ CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2//1.27513e-34",0.968013056193,2.49930530938e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043765_T001","Zm00001d043765","sp|Q9FL25|KCO2_ARATH Two-pore potassium channel 2 OS=Arabidopsis thaliana GN=TPK2 PE=2 SV=1//2.42063e-81",0.976946341553,4.9338892083e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032353_T001","Zm00001d032353","sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1//0",0.950980622637,2.05245291673e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043680_T001","Zm00001d043680","sp|Q5NAI4|PLA5_ORYSJ Phospholipase A1-II 5 OS=Oryza sativa subsp. japonica GN=Os01g0710700 PE=2 SV=1//0",0.960712771959,6.9001065639e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036828_T001","Zm00001d036828",null,0.959168317741,8.34545507367e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d035812_T002","Zm00001d035812","sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1//0",0.985312674429,5.25174082e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011813_T001","Zm00001d011813","sp|P37220|ASR3_SOLLC Abscisic stress-ripening protein 3 OS=Solanum lycopersicum GN=ASR3 PE=4 SV=2//8.26625e-07",0.970798854131,1.59219117446E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042289_T001","Zm00001d042289",null,0.950789907975,2.0920134236e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032249_T001","Zm00001d032249","sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2//7.10823e-45",0.963881911779,4.5556452033e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033775_T003","Zm00001d033775","sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g74260 PE=2 SV=3//0",0.955819748156,1.23066829638e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043059_T003","Zm00001d043059","sp|Q9ZVH7|FAX3_ARATH Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 SV=2//2.69083e-44",0.952433944196,1.77007460112e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052439_T003","Zm00001d052439","sp|O43120|UAP2_SCHPO Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uap2 PE=1 SV=1//1.44165e-21",0.954938909377,1.35631323372e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003426_T002","Zm00001d003426","sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1//1.06414e-25",0.963778611872,4.62035938398e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007366_T003","Zm00001d007366","sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 OS=Arabidopsis thaliana GN=At3g48420 PE=1 SV=1//2.18435e-133",0.975805801492,6.26921665692e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d054079_T002","Zm00001d054079","sp|Q6YPG5|NOS_ORYSJ Putative nitric oxide synthase OS=Oryza sativa subsp. japonica GN=Os02g0104700 PE=3 SV=1//0",0.960113385598,7.43522736268e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d032215_T002","Zm00001d032215","sp|Q31QE7|CLPS_SYNE7 ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus elongatus (strain PCC 7942) GN=clpS PE=3 SV=1//7.47291e-23",0.950292176236,2.19811373414E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051870_T001","Zm00001d051870","sp|Q8LL87|COMT1_COFCA Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1//1.28135e-64",0.965097736126,3.84668123132e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d010822_T001","Zm00001d010822","sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1//1.5094e-22",0.966098416833,3.33159366317e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042526_T002","Zm00001d042526","sp|Q9FN48|CAS_ARATH Calcium sensing receptor, chloroplastic OS=Arabidopsis thaliana GN=CAS PE=1 SV=1//7.94753e-07",0.972753997228,1.12964052779E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002208_T001","Zm00001d002208","sp|Q1G3K8|RIC7_ARATH CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1//5.72967e-15",0.952266104988,1.8010115852e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045919_T003","Zm00001d045919","sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1//0",0.965808778399,3.47466404316e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015346_T001","Zm00001d015346","sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2//2.05973e-17",0.957929891206,9.66987987905e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028756_T001","Zm00001d028756",null,0.95056075012,2.14034561186e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d030398_T003","Zm00001d030398","sp|Q0WLC6|PP349_ARATH Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana GN=MRL1 PE=2 SV=2//7.50587e-17",0.976233133017,5.73890348576e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013295_T001","Zm00001d013295",null,0.956001873643,1.20588269681e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014597_T001","Zm00001d014597","sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1//1.0971e-09",0.961938484295,5.90105543541e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d004976_T003","Zm00001d004976","sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana GN=TAP46 PE=1 SV=2//1.61286e-41",-0.951251295393,1.99732747672e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008017_T001","Zm00001d008017",null,0.955351446038,1.29626047096E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008394_T001","Zm00001d008394","sp|Q9SW33|TL1Y_ARATH Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At4g24930 PE=1 SV=1//4.26465e-45",0.97258929497,1.16387635529E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051851_T005","Zm00001d051851","sp|Q0J9V5|CXXS1_ORYSJ Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 PE=2 SV=1//1.57678e-13",0.952078725045,1.83605555515e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037043_T001","Zm00001d037043",null,0.973491847252,9.85968853229e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036727_T001","Zm00001d036727","sp|Q7TMR0|PCP_MOUSE Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2//4.47404e-129",0.957493546986,1.01743398306e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d009503_T001","Zm00001d009503",null,0.961572219779,6.18666738506e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012734_T001","Zm00001d012734","sp|Q9SGQ0|VOZ1_ARATH Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=1//9.56869e-15",0.985344477886,5.19540366284e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002943_T009","Zm00001d002943","sp|Q7XUK4|GUN12_ORYSJ Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2//0",0.956755345132,1.10751828042E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003430_T001","Zm00001d003430","sp|Q9M876|SYYM_ARATH Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=EMB2768 PE=2 SV=1//0",0.961767198672,6.03328852211e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025847_T004","Zm00001d025847","sp|Q7XSK0|BGL18_ORYSJ Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=3 SV=2//3.10119e-35",0.974164666465,8.68016813982e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017147_T001","Zm00001d017147","sp|Q96288|BBX24_ARATH B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1//5.06308e-66",0.955192218477,1.31918362722e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029983_T001","Zm00001d029983","sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3//0",0.959360349188,8.1536990848e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d041119_T005","Zm00001d041119","sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1//0",0.961189364897,6.49684904097e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008625_T001","Zm00001d008625","sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2//2.77137e-180",0.972137448813,1.26205905948E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027309_T008","Zm00001d027309","sp|G4LTX4|DSP4_CASSA Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa GN=DSP4 PE=1 SV=1//7.00096e-38",0.977532362476,4.34215223777e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033527_T002","Zm00001d033527","sp|Q9AUK4|MRS2A_ORYSJ Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica GN=MRS2-A PE=2 SV=1//6.08997e-07",0.957636129628,1.00072547715E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d024568_T001","Zm00001d024568","sp|Q5J4W4|MPK2_ORYSJ Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1//0",0.9515872879,1.93053960129e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003612_T001","Zm00001d003612","sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1//1.81506e-27",0.971138070842,1.50269485744e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043526_T004","Zm00001d043526","sp|B8ETG9|YBEY_METSB Endoribonuclease YbeY OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=ybeY PE=3 SV=1//1.27587e-15",0.976777312832,5.11598243769e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015204_T001","Zm00001d015204","sp|O80360|RK3_TOBAC 50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum GN=RPL3 PE=2 SV=1//1.01714e-113",0.950930915326,2.06270618874e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036230_T001","Zm00001d036230","sp|P51281|YCF45_PORPU Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1//8.19156e-137",0.964921693731,3.94350273325E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044525_T001","Zm00001d044525","sp|Q5JKN1|P2C05_ORYSJ Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1//0",0.980799934208,1.98982843536E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029251_T001","Zm00001d029251","sp|P93051|ERDL7_ARATH Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2//1.91446e-30",0.977230145868,4.63979286103e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d031258_T005","Zm00001d031258","sp|Q39061|CP33_ARATH RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1//7.16133e-25",0.962029026981,5.83209283977e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d028221_T001","Zm00001d028221","sp|Q8GWE0|PP314_ARATH Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana GN=P67 PE=1 SV=3//0",0.975847041491,6.21639903997e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053807_T001","Zm00001d053807","sp|Q6H6D2|HEM3_ORYSJ Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMC PE=2 SV=1//0",0.954686995409,1.39405618604e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d000349_T001","Zm00001d000349","sp|O63066|SECY_MAIZE Preprotein translocase subunit SECY, chloroplastic OS=Zea mays GN=SECY PE=2 SV=1//2.58815e-112",0.95531475358,1.30151463695e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040599_T001","Zm00001d040599","sp|Q2QTL0|NADA_ORYSJ Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0290150 PE=3 SV=2//0",0.984033347873,7.95660071162e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011833_T001","Zm00001d011833","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//0",0.97955413257,2.71907480975e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d048175_T004","Zm00001d048175","sp|Q9C9Q4|JAC1_ARATH J domain-containing protein required for chloroplast accumulation response 1 OS=Arabidopsis thaliana GN=JAC1 PE=1 SV=1//7.63757e-19",0.967951668982,2.5231186962e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020825_T001","Zm00001d020825","sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1//6.60089e-18",0.951555298856,1.93682092409e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049026_T011","Zm00001d049026","sp|P19672|YQXC_BACSU Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) GN=yqxC PE=3 SV=3//2.19335e-11",0.957449655731,1.02262170643E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053861_T005","Zm00001d053861","sp|B9F2U5|GUFP_ORYSJ Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0157700 PE=3 SV=1//5.07271e-62",0.994589084618,3.61979335395e-11]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053861_T004","Zm00001d053861","sp|B9F2U5|GUFP_ORYSJ Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0157700 PE=3 SV=1//5.07271e-62",0.955781064744,1.23598444057E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037476_T001","Zm00001d037476","sp|Q9FKC3|PP424_ARATH Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2//1.5647e-07",0.971237258773,1.4772975554e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025470_T008","Zm00001d025470","sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1//4.39475e-21",0.977127101238,4.74491186342e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045877_T001","Zm00001d045877",null,0.950120654463,2.23564888269e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d021295_T003","Zm00001d021295","sp|Q02104|LIP1_PSYIM Lipase 1 OS=Psychrobacter immobilis GN=lip1 PE=1 SV=2//3.18516e-07",0.975188295814,7.10376983903e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036410_T003","Zm00001d036410","sp|Q505J9|ATAD1_RAT ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=1 SV=1//1.67198e-87",-0.950669132192,2.11737738349e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051563_T002","Zm00001d051563","sp|Q43814|OTC_PEA Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1//0",0.957977976128,9.61552717893e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d006625_T001","Zm00001d006625",null,0.968442848563,2.33754211099e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d024640_T002","Zm00001d024640","sp|P49307|MOCA_RHIML Rhizopine catabolism protein MocA OS=Rhizobium meliloti GN=mocA PE=3 SV=1//3.11491e-15",0.969868124598,1.85970982169e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044765_T001","Zm00001d044765","sp|B6SU46|AAMT2_MAIZE Anthranilate O-methyltransferase 2 OS=Zea mays GN=AAMT2 PE=1 SV=1//0",0.976291409068,5.6694447359e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049046_T002","Zm00001d049046","sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=2 SV=1//0",0.955660303672,1.25269765494e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003640_T001","Zm00001d003640","sp|O80662|TCHQD_ARATH Glutathione S-transferase TCHQD OS=Arabidopsis thaliana GN=TCHQD PE=2 SV=1//1.65696e-106",0.959539555202,7.97792317542e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d002089_T036","Zm00001d002089","sp|F4JKH6|TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=1//0",0.954095343662,1.48598311078E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d016834_T001","Zm00001d016834","sp|Q9SY73|PTALR_ARATH NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1//2.01226e-89",0.955435445723,1.28429553747e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011931_T001","Zm00001d011931",null,0.965420698994,3.67397468004E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025453_T006","Zm00001d025453","sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1//6.97686e-26",0.975700896417,6.40518535988e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011569_T001","Zm00001d011569","sp|P12403|ATPZ_NOSS1 ATP synthase protein I OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=atpI PE=3 SV=2//6.7685e-09",0.983256764836,1.00760311206E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022113_T004","Zm00001d022113","sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1//1.75845e-62",0.957505119183,1.01606969549e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013795_T002","Zm00001d013795","sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3//2.30183e-18",0.964733145136,4.04934141107e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013799_T001","Zm00001d013799","sp|O80885|ARASP_ARATH Membrane metalloprotease ARASP, chloroplastic OS=Arabidopsis thaliana GN=ARASP PE=2 SV=1//9.98966e-131",0.961626030827,6.14403123933e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017130_T001","Zm00001d017130",null,0.950061331123,2.24874859311e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044208_T001","Zm00001d044208","sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp. japonica GN=Os01g0618400 PE=2 SV=1//2.04987e-48",0.97015363382,1.77411075164e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042049_T004","Zm00001d042049","sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1//5.09495e-48",0.962214325775,5.69295512953e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d030859_T002","Zm00001d030859","sp|O23254|GLYC4_ARATH Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1//4.11824e-27",0.977881601262,4.01736568456e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020409_T003","Zm00001d020409","sp|Q9LVI4|TIF6B_ARATH Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1//3.41516e-08",0.981402675999,1.69821932072E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039987_T005","Zm00001d039987","sp|P08452|Y1174_SYNP6 Uncharacterized lipoprotein syc1174_c OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1174_c PE=3 SV=2//7.10527e-15",0.983002962811,1.08586002412E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011448_T001","Zm00001d011448","sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1//3.68077e-12",0.967298595804,2.78781530749E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033746_T003","Zm00001d033746","sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2//0",0.962848584769,5.23653993056e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007442_T001","Zm00001d007442","sp|Q91WW7|PLPL3_MOUSE Patatin-like phospholipase domain-containing protein 3 OS=Mus musculus GN=Pnpla3 PE=2 SV=1//2.01476e-17",0.971206766786,1.48506843711e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033060_T001","Zm00001d033060","sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1//4.34185e-39",0.971480492618,1.41646127272e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015767_T002","Zm00001d015767",null,-0.971118076177,1.50785637361e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020538_T001","Zm00001d020538",null,0.973686572741,9.5059458971e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d050645_T003","Zm00001d050645","sp|Q6H6N5|NIN3_ORYSJ Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=NIN3 PE=2 SV=1//0",0.96960406876,1.94177220969e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039816_T002","Zm00001d039816","sp|F4JJT9|SYDM_ARATH Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At4g33760 PE=2 SV=1//0",0.987957897184,1.95445570839e-09]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d015377_T001","Zm00001d015377","sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1//7.18994e-23",0.975191328365,7.09946594846e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039181_T001","Zm00001d039181","sp|O24621|SIGC_ARATH RNA polymerase sigma factor sigC OS=Arabidopsis thaliana GN=SIGC PE=2 SV=1//2.97789e-47",0.968748281174,2.2277362266e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025273_T012","Zm00001d025273","sp|Q7F9I1|CLPC1_ORYSJ Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC1 PE=2 SV=2//1.28425e-80",0.96138172703,6.33949383655e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d035390_T001","Zm00001d035390","sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=2 SV=3//4.41972e-10",0.954661447016,1.39793003662e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d042005_T003","Zm00001d042005","sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1//1.1026e-27",0.973026955565,1.07467155619E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026285_T001","Zm00001d026285",null,0.950565371559,2.13936222559e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d047105_T001","Zm00001d047105","sp|Q940Y1|ORP2A_ARATH Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1//4.52726e-20",-0.963577733429,4.74829522917e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d035631_T001","Zm00001d035631","sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20 OS=Arabidopsis thaliana GN=CHX20 PE=2 SV=1//0",0.965546893629,3.60819159884E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036371_T001","Zm00001d036371","sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1//0",0.96849293364,2.31924700778E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011387_T001","Zm00001d011387","sp|Q9AXB0|DCUP1_ORYSJ Uroporphyrinogen decarboxylase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0622300 PE=2 SV=1//8.5125e-151",0.970972029973,1.54598695845e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003162_T001","Zm00001d003162","sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1//1.62892e-39",0.963141423372,5.03588027945e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023534_T002","Zm00001d023534","sp|Q9SRE0|5FCLL_ARATH 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 OS=Arabidopsis thaliana GN=COG0212 PE=2 SV=1//3.46236e-137",0.95779616402,9.82232196689e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014035_T001","Zm00001d014035","sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1//2.66852e-10",0.962116404302,5.76614997971e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017435_T001","Zm00001d017435",null,0.954793490397,1.37800023725E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033181_T002","Zm00001d033181","sp|F4I0K2|SCKL2_ARATH Fructokinase-like 2, chloroplastic OS=Arabidopsis thaliana GN=FLN2 PE=1 SV=2//3.73838e-159",0.963209356016,4.99021681755e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011887_T001","Zm00001d011887",null,0.950734219976,2.1036782698e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018274_T001","Zm00001d018274","sp|Q8RXK8|SYIM_ARATH Isoleucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA2 PE=2 SV=1//1.6756e-75",0.961462984376,6.27394100672e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039036_T001","Zm00001d039036","sp|A5GQ79|RIMM_SYNR3 Ribosome maturation factor RimM OS=Synechococcus sp. (strain RCC307) GN=rimM PE=3 SV=1//1.33275e-09",0.965768002296,3.49519209353e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039480_T001","Zm00001d039480","sp|Q9M0E1|FBL77_ARATH F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana GN=At4g29420 PE=2 SV=1//2.32638e-44",0.959771355388,7.75503896433e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022107_T001","Zm00001d022107",null,0.951175117166,2.0127217768e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023792_T001","Zm00001d023792","sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2//0",0.964276665762,4.3149497797e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037775_T004","Zm00001d037775","sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=1 SV=1//2.99974e-20",0.959304565207,8.20903852006e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d006795_T001","Zm00001d006795","sp|Q8GT20|BEBT_TOBAC Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1//5.53321e-113",0.965483918576,3.6409012627e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038163_T004","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.972964958669,1.08696550871E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038163_T007","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.958287154805,9.27181489807e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d013741_T001","Zm00001d013741","sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1//3.51416e-154",0.955024074518,1.34373851801E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d038163_T001","Zm00001d038163","sp|P11155|PPDK1_MAIZE Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2//0",0.964909210097,3.95044147616e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d033853_T003","Zm00001d033853","sp|Q75GI4|ITPK3_ORYSJ Inositol-tetrakisphosphate 1-kinase 3 OS=Oryza sativa subsp. japonica GN=ITPK3 OsIPK1?? (OsMIK) PE=2 SV=1//1.96815e-166",0.964454452012,4.20990537098e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d053722_T001","Zm00001d053722","sp|Q2N5X0|KYNB_ERYLH Kynurenine formamidase OS=Erythrobacter litoralis (strain HTCC2594) GN=kynB PE=3 SV=1//2.28693e-15",0.957743925088,9.88238736843e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020434_T001","Zm00001d020434","sp|Q9CAC5|NDHL_ARATH NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana GN=ndhL PE=2 SV=1//1.15549e-22",0.95837965972,9.17089777008e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d020727_T016","Zm00001d020727","sp|Q24K16|ZADH2_BOVIN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1//7.00939e-24",0.977507293171,4.36624711941e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029502_T001","Zm00001d029502","sp|O24357|G6PDC_SPIOL Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1//0",0.983301325172,9.94340454419E-9]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001843_T001","Zm00001d001843","sp|Q7XKD0|TRXX_ORYSJ Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica GN=TRX-X PE=2 SV=1//2.36156e-65",0.953386635253,1.60236067281E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043556_T001","Zm00001d043556","sp|Q680H3|PP170_ARATH Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana GN=PCMP-H75 PE=2 SV=2//5.48822e-133",0.953728540593,1.54534668217e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039663_T001","Zm00001d039663","sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160 OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1//7.29647e-15",0.96414844867,4.39199146385e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d000037_T001","Zm00001d000037","sp|O23522|PLA14_ARATH Phospholipase A1-Ibeta2, chloroplastic OS=Arabidopsis thaliana GN=At4g16820 PE=1 SV=2//5.11114e-117",0.958498469974,9.04256496348e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039663_T004","Zm00001d039663","sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160 OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1//7.29647e-15",0.960656617373,6.94890027741e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014867_T001","Zm00001d014867","sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3//0",0.968471687602,2.32699380653E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017364_T001","Zm00001d017364","sp|P80680|FTRV_MAIZE Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays PE=1 SV=1//3.50485e-53",0.961404285657,6.32124077304e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049160_T001","Zm00001d049160","sp|O22056|SIGB_ARATH RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2//2.90666e-38",0.958085573805,9.49478300871e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d003846_T003","Zm00001d003846",null,0.967904018849,2.54172733083e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040905_T001","Zm00001d040905",null,0.958868247257,8.65225089353e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d012806_T002","Zm00001d012806",null,0.955366850919,1.2940595977E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026634_T002","Zm00001d026634","sp|Q940P5|TET19_ARATH Tetraspanin-19 OS=Arabidopsis thaliana GN=TOM2AH3 PE=2 SV=1//3.00721e-52",0.970846406287,1.57939600509e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023374_T001","Zm00001d023374",null,0.978229398218,3.71346200456e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d043778_T001","Zm00001d043778","sp|Q9SF38|PP222_ARATH Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana GN=HCF152 PE=2 SV=1//0",0.968477659137,2.3248143699e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d011797_T002","Zm00001d011797","sp|Q8RWM7|CCB3_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana GN=CCB3 PE=1 SV=1//3.66087e-50",0.955493576764,1.2760667909E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040202_T004","Zm00001d040202","sp|Q5RBR3|CHMP5_PONAB Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1//8.18321e-31",0.970158354531,1.77272227564e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d029325_T002","Zm00001d029325","sp|Q9ZUU4|CP29B_ARATH RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana GN=CP29B PE=1 SV=1//1.10464e-74",0.962536422187,5.45738583213E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045661_T001","Zm00001d045661","sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2//1.65086e-57",0.957115018922,1.06286844437E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051180_T001","Zm00001d051180",null,-0.958118286105,9.45831357166e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d034350_T001","Zm00001d034350",null,0.963690812211,4.67593578524e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d014553_T001","Zm00001d014553",null,-0.95274902931,1.71313579501E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d023292_T006","Zm00001d023292","sp|Q8S9L5|TIG_ARATH Trigger factor-like protein TIG, Chloroplastic OS=Arabidopsis thaliana GN=TIG PE=2 SV=1//9.91078e-54",0.972502204326,1.18231040958E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d022144_T002","Zm00001d022144","sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1//3.52419e-10",0.955559313788,1.26681185941E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036482_T001","Zm00001d036482",null,-0.952675122962,1.72635899783e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d040034_T001","Zm00001d040034","sp|F4I4K5|LPR1_ARATH Multicopper oxidase LPR1 OS=Arabidopsis thaliana GN=LPR1 PE=2 SV=1//0",0.97710743568,4.76518720038e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001206_T001","Zm00001d001206",null,0.957523286887,1.01393077134e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052801_T001","Zm00001d052801","sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1//5.16658e-32",0.962878226302,5.21594454073e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d031071_T001","Zm00001d031071","sp|Q2QM69|BQMT2_ORYSJ 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0615400 PE=2 SV=2//8.15116e-174",0.964418704463,4.2308616055e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052630_T001","Zm00001d052630","sp|Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140 OS=Arabidopsis thaliana GN=At3g49140 PE=1 SV=2//3.75859e-27",0.976744524664,5.15191684869e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051908_T002","Zm00001d051908","sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1426 PE=3 SV=1//7.48953e-08",0.9741974753830001,8.62566849058e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d018234_T001","Zm00001d018234",null,0.950027010267,2.25635502993e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d049365_T001","Zm00001d049365","sp|Q9FV52|MAP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2//4.93081e-135",0.970465601487,1.68419531654E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d051556_T001","Zm00001d051556","sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1//0",0.967776144282,2.59220589438e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d021385_T001","Zm00001d021385","sp|Q05001|NCPR_CATRO NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1//0",0.952930664314,1.68097916786E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d008497_T003","Zm00001d008497","sp|C0ZB13|SYL_BREBN Leucine--tRNA ligase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=leuS PE=3 SV=1//2.26356e-06",0.964424163487,4.22765601638e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d017281_T001","Zm00001d017281","sp|Q9SL29|CNG15_ARATH Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=3 SV=1//0",0.965138734265,3.82440644486e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d045938_T005","Zm00001d045938",null,0.967411009269,2.74074691831e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d001132_T001","Zm00001d001132",null,0.954118923562,1.48222978025e-06]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d025249_T001","Zm00001d025249","sp|A6XIG6|SLMH_HYDIT 4-sulfomuconolactone hydrolase OS=Hydrogenophaga intermedia PE=1 SV=1//1.26254e-07",0.967818562711,2.57537360326e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d027230_T001","Zm00001d027230",null,0.971274856653,1.46776033549e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d036698_T001","Zm00001d036698","sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1//0",0.973441699618,9.9524636088e-08]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d039349_T002","Zm00001d039349",null,0.976830960074,5.05761832414E-8]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037712_T001","Zm00001d037712","sp|Q9M7J4|MFP1_TOBAC MAR-binding filament-like protein 1-1 OS=Nicotiana tabacum GN=MFP1-1 PE=2 SV=1//2.44556e-89",0.961547143035,6.20661660289e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d044228_T001","Zm00001d044228","sp|Q41739|THI42_MAIZE Thiamine thiazole synthase 2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1//0",0.961104450314,6.56729023607e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d052034_T001","Zm00001d052034","sp|Q6Z4I3|TRH21_ORYSJ Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800 PE=2 SV=1//8.02347e-12",0.962131210246,5.75503502631e-07]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d037059_T004","Zm00001d037059","sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1//0",0.957075453553,1.06770889596E-6]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d007639_T002","Zm00001d007639","sp|Q8YZH7|DER_NOSS1 GTPase Der OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=der PE=3 SV=1//6.24696e-10",0.970175464204,1.76769714422E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d046442_T002","Zm00001d046442","sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=2 SV=1//3.15173e-10",0.969718340406,1.90591293636E-7]
["LNC_000575","XLOC_006280","lncRNA","Zm00001d026113_T017","Zm00001d026113","sp|Q9ZUL3|IDD5_ARATH Protein indeterminate-domain 5, chloroplastic OS=Arabidopsis thaliana GN=IDD5 PE=1 SV=1//3.76326e-88",0.951148840646,2.01805357936e-06]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d048315_T003","Zm00001d048315","sp|A4G0J1|DHQS_METM5 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=aroB&apos; PE=3 SV=1//8.56672e-73",0.966852453903,2.98099936291E-7]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d016274_T001","Zm00001d016274","sp|Q8LPQ8|MSSP2_ARATH Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=1 SV=2//6.22536e-93",0.956576465219,1.13027194093e-06]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d023292_T006","Zm00001d023292","sp|Q8S9L5|TIG_ARATH Trigger factor-like protein TIG, Chloroplastic OS=Arabidopsis thaliana GN=TIG PE=2 SV=1//9.91078e-54",0.956342312091,1.1606155963E-6]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d005395_T001","Zm00001d005395","sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1//3.82148e-13",0.961397292565,6.32689468372e-07]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d052081_T003","Zm00001d052081",null,0.951693135514,1.90987061277e-06]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d054070_T001","Zm00001d054070","sp|Q9SSE9|JMJ25_ARATH Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana GN=JMJ25 PE=1 SV=1//5.06704e-57",0.97132922264,1.45405639529e-07]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d025647_T001","Zm00001d025647","sp|F4JLS1|LDL3_ARATH Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=LDL3 PE=2 SV=1//9.49994e-38",0.97456750368,8.02966044766e-08]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d032301_T008","Zm00001d032301","sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana GN=At1g78140 PE=2 SV=1//1.37523e-07",0.956129700185,1.18872462052E-6]
["LNC_004257","XLOC_042920","lncRNA","Zm00001d015816_T003","Zm00001d015816","sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1//0",0.975556673638,6.59593859531e-08]